Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g22260 |
| malus_domestica | MD05G1203800.v1.1 |
| prunus_persica | Prupe.8G230100_v2.0.a1 |
| pyrus_communis | pycom05g19020 |
| rosa_chinensis | RchiOBHm_Chr6g0289191 RchiOBHm_Chr6g0289221 |
| rosa_laevigata | RLG00000009132 RLG00000009134 RLG00000012320 RLG00000012323 RLG00000012325 |
| rosa_multiflora | Rmu_co8489247.1_g000002 Rmu_sc0001527.1_g000006 Rmu_sc0001527.1_g000010 Rmu_sc0001527.1_g000011 |
| rosa_roxburghii | Rroxscaffold_7G00179440 Rroxscaffold_7G00179500 |
| rosa_rugosa | Rorug06G0201500 Rorug06G0201800 Rorug06G0201900 Rorug06G0202000 |
| rosa_samantha | Rh6AG312700 Rh6AG312900 Rh6BG319700 Rh6BG320300 Rh6BG320400 Rh6CG326100 Rh6CG326400 Rh6DG312100 |
| rosa_wichuraiana | Rw6G027020 Rw6G027040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 253 |
| AcsI | RAATTY | 1 cut(s) | 64 |
| AgsI | TTSAA | 4 cut(s) | 12, 63, 185, 295 |
| AjnI | CCWGG | 1 cut(s) | 408 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 177, 209 |
| AluBI | AGCT | 3 cut(s) | 22, 76, 110 |
| AluI | AGCT | 3 cut(s) | 22, 76, 110 |
| AoxI | GGCC | 1 cut(s) | 285 |
| ApoI | RAATTY | 1 cut(s) | 64 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 194, 226 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 237 |
| AspS9I | GGNCC | 1 cut(s) | 391 |
| AvaII | GGWCC | 1 cut(s) | 391 |
| BccI | CCATC | 1 cut(s) | 391 |
| BciT130I | CCWGG | 1 cut(s) | 410 |
| BfaI | CTAG | 1 cut(s) | 111 |
| Bme1390I | CCNGG | 1 cut(s) | 410 |
| Bme18I | GGWCC | 1 cut(s) | 391 |
| BmgT120I | GGNCC | 1 cut(s) | 391 |
| BmiI | GGNNCC | 1 cut(s) | 392 |
| BmrFI | CCNGG | 1 cut(s) | 410 |
| BmrI | ACTGGG | 1 cut(s) | 153 |
| BmuI | ACTGGG | 1 cut(s) | 153 |
| BsaJI | CCNNGG | 1 cut(s) | 394 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 177, 207 |
| Bse1I | ACTGG | 1 cut(s) | 159 |
| BseBI | CCWGG | 1 cut(s) | 410 |
| BseDI | CCNNGG | 1 cut(s) | 394 |
| BseGI | GGATG | 1 cut(s) | 68 |
| BseNI | ACTGG | 1 cut(s) | 159 |
| BshFI | GGCC | 1 cut(s) | 287 |
| BslFI | GGGAC | 1 cut(s) | 404 |
| BsmFI | GGGAC | 1 cut(s) | 404 |
| BsnI | GGCC | 1 cut(s) | 287 |
| BspACI | CCGC | 1 cut(s) | 253 |
| BspANI | GGCC | 1 cut(s) | 287 |
| BspLI | GGNNCC | 1 cut(s) | 392 |
| BsrI | ACTGG | 1 cut(s) | 159 |
| BssECI | CCNNGG | 1 cut(s) | 394 |
| BssT1I | CCWWGG | 1 cut(s) | 394 |
| Bst2UI | CCWGG | 1 cut(s) | 410 |
| BstC8I | GCNNGC | 1 cut(s) | 20 |
| BstF5I | GGATG | 1 cut(s) | 68 |
| BstNI | CCWGG | 1 cut(s) | 410 |
| BstSCI | CCNGG | 1 cut(s) | 408 |
| BsuRI | GGCC | 1 cut(s) | 287 |
| BtsCI | GGATG | 1 cut(s) | 68 |
| BtsIMutI | CAGTG | 1 cut(s) | 166 |
| Cac8I | GCNNGC | 1 cut(s) | 20 |
| Cfr13I | GGNCC | 1 cut(s) | 391 |
| CviAII | CATG | 2 cut(s) | 6, 256 |
| CviJI | RGCY | 5 cut(s) | 22, 76, 110, 287, 382 |
| CviKI_1 | RGCY | 5 cut(s) | 22, 76, 110, 287, 382 |
| Eco130I | CCWWGG | 1 cut(s) | 394 |
| Eco47I | GGWCC | 1 cut(s) | 391 |
| EcoRII | CCWGG | 1 cut(s) | 408 |
| EcoT14I | CCWWGG | 1 cut(s) | 394 |
| ErhI | CCWWGG | 1 cut(s) | 394 |
| FaeI | CATG | 2 cut(s) | 9, 259 |
| FaiI | YATR | 5 cut(s) | 7, 127, 257, 266, 367 |
| FalI | AAGNNNNNCTT | 5 cut(s) | 38, 40, 72, 311, 343 |
| FaqI | GGGAC | 1 cut(s) | 404 |
| FatI | CATG | 2 cut(s) | 5, 255 |
| FokI | GGATG | 1 cut(s) | 55 |
| FspBI | CTAG | 1 cut(s) | 111 |
| HaeIII | GGCC | 1 cut(s) | 287 |
| Hin1II | CATG | 2 cut(s) | 9, 259 |
| HindIII | AAGCTT | 2 cut(s) | 20, 74 |
| HinfI | GANTC | 1 cut(s) | 259 |
| Hpy166II | GTNNAC | 1 cut(s) | 311 |
| Hpy188III | TCNNGA | 1 cut(s) | 37 |
| Hpy8I | GTNNAC | 1 cut(s) | 311 |
| HpyCH4V | TGCA | 3 cut(s) | 207, 268, 401 |
| Hsp92II | CATG | 2 cut(s) | 9, 259 |
| LpnPI | CCDG | 6 cut(s) | 57, 172, 198, 285, 372, 395 |
| MaeI | CTAG | 1 cut(s) | 111 |
| MaeIII | GTNAC | 1 cut(s) | 103 |
| MboII | GAAGA | 2 cut(s) | 51, 82 |
| MluCI | AATT | 4 cut(s) | 64, 153, 217, 418 |
| MnlI | CCTC | 4 cut(s) | 148, 203, 288, 298 |
| MroXI | GAANNNNTTC | 1 cut(s) | 237 |
| MspR9I | CCNGG | 1 cut(s) | 410 |
| MvaI | CCWGG | 1 cut(s) | 410 |
| NlaIII | CATG | 2 cut(s) | 9, 259 |
| NlaIV | GGNNCC | 1 cut(s) | 392 |
| PdmI | GAANNNNTTC | 1 cut(s) | 237 |
| PfeI | GAWTC | 1 cut(s) | 259 |
| PfoI | TCCNGGA | 1 cut(s) | 408 |
| Psp6I | CCWGG | 1 cut(s) | 408 |
| PspGI | CCWGG | 1 cut(s) | 408 |
| PspN4I | GGNNCC | 1 cut(s) | 392 |
| PspPI | GGNCC | 1 cut(s) | 391 |
| Sau96I | GGNCC | 1 cut(s) | 391 |
| ScrFI | CCNGG | 1 cut(s) | 410 |
| SetI | ASST | 8 cut(s) | 24, 78, 112, 140, 217, 274, 310, 400 |
| SinI | GGWCC | 1 cut(s) | 391 |
| Sse9I | AATT | 4 cut(s) | 64, 153, 217, 418 |
| SsiI | CCGC | 1 cut(s) | 253 |
| SspMI | CTAG | 1 cut(s) | 111 |
| StyD4I | CCNGG | 1 cut(s) | 408 |
| StyI | CCWWGG | 1 cut(s) | 394 |
| TasI | AATT | 4 cut(s) | 64, 153, 217, 418 |
| TfiI | GAWTC | 1 cut(s) | 259 |
| TscAI | CASTG | 1 cut(s) | 166 |
| TspDTI | ATGAA | 4 cut(s) | 15, 57, 69, 246 |
| TspRI | CASTG | 1 cut(s) | 166 |
| VpaK11BI | GGWCC | 1 cut(s) | 391 |
| XapI | RAATTY | 1 cut(s) | 64 |
| XmnI | GAANNNNTTC | 1 cut(s) | 237 |
| XspI | CTAG | 1 cut(s) | 111 |