Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g22260 |
| malus_domestica | MD05G1203800.v1.1 |
| prunus_persica | Prupe.8G230100_v2.0.a1 |
| pyrus_communis | pycom05g19020 |
| rosa_chinensis | RchiOBHm_Chr6g0289191 RchiOBHm_Chr6g0289221 |
| rosa_laevigata | RLG00000009132 RLG00000009134 RLG00000012320 RLG00000012323 RLG00000012325 |
| rosa_multiflora | Rmu_co8489247.1_g000002 Rmu_sc0001527.1_g000006 Rmu_sc0001527.1_g000010 Rmu_sc0001527.1_g000011 |
| rosa_roxburghii | Rroxscaffold_7G00179440 Rroxscaffold_7G00179500 |
| rosa_rugosa | Rorug06G0201500 Rorug06G0201800 Rorug06G0201900 Rorug06G0202000 |
| rosa_samantha | Rh6AG312700 Rh6AG312900 Rh6BG319700 Rh6BG320300 Rh6BG320400 Rh6CG326100 Rh6CG326400 Rh6DG312100 |
| rosa_wichuraiana | Rw6G027020 Rw6G027040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 141 |
| AcsI | RAATTY | 1 cut(s) | 82 |
| AgsI | TTSAA | 4 cut(s) | 30, 81, 159, 328 |
| AluBI | AGCT | 4 cut(s) | 93, 103, 128, 363 |
| AluI | AGCT | 4 cut(s) | 93, 103, 128, 363 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 366 |
| ApeKI | GCWGC | 1 cut(s) | 23 |
| ApoI | RAATTY | 1 cut(s) | 82 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 227, 259 |
| AsuHPI | GGTGA | 1 cut(s) | 165 |
| BbvI | GCAGC | 1 cut(s) | 10 |
| BfaI | CTAG | 2 cut(s) | 129, 192 |
| BisI | GCNGC | 1 cut(s) | 24 |
| BlsI | GCNGC | 1 cut(s) | 25 |
| BpuEI | CTTGAG | 1 cut(s) | 236 |
| BseGI | GGATG | 1 cut(s) | 5 |
| BseMII | CTCAG | 1 cut(s) | 274 |
| BseRI | GAGGAG | 2 cut(s) | 297, 300 |
| BseXI | GCAGC | 1 cut(s) | 10 |
| BspACI | CCGC | 1 cut(s) | 141 |
| BspCNI | CTCAG | 1 cut(s) | 273 |
| Bst4CI | ACNGT | 1 cut(s) | 239 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 20 |
| BstDEI | CTNAG | 1 cut(s) | 260 |
| BstF5I | GGATG | 1 cut(s) | 5 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 20 |
| BstV1I | GCAGC | 1 cut(s) | 10 |
| BtsCI | GGATG | 1 cut(s) | 5 |
| BtsIMutI | CAGTG | 1 cut(s) | 268 |
| CaiI | CAGNNNCTG | 1 cut(s) | 366 |
| CviAII | CATG | 2 cut(s) | 253, 289 |
| CviJI | RGCY | 4 cut(s) | 93, 103, 128, 363 |
| CviKI_1 | RGCY | 4 cut(s) | 93, 103, 128, 363 |
| DdeI | CTNAG | 1 cut(s) | 260 |
| FaeI | CATG | 2 cut(s) | 256, 292 |
| FaiI | YATR | 5 cut(s) | 146, 254, 290, 297, 299 |
| FatI | CATG | 2 cut(s) | 252, 288 |
| FauNDI | CATATG | 1 cut(s) | 297 |
| Fnu4HI | GCNGC | 1 cut(s) | 24 |
| Fsp4HI | GCNGC | 1 cut(s) | 24 |
| FspBI | CTAG | 2 cut(s) | 129, 192 |
| GluI | GCNGC | 1 cut(s) | 24 |
| Hin1II | CATG | 2 cut(s) | 256, 292 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 2 cut(s) | 256, 292 |
| HphI | GGTGA | 1 cut(s) | 165 |
| Hpy166II | GTNNAC | 1 cut(s) | 344 |
| Hpy188III | TCNNGA | 1 cut(s) | 352 |
| Hpy8I | GTNNAC | 1 cut(s) | 344 |
| HpyCH4III | ACNGT | 1 cut(s) | 239 |
| HpyCH4V | TGCA | 2 cut(s) | 14, 36 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 20 |
| HpyF3I | CTNAG | 1 cut(s) | 260 |
| Hsp92II | CATG | 2 cut(s) | 256, 292 |
| LpnPI | CCDG | 3 cut(s) | 75, 231, 352 |
| Lsp1109I | GCAGC | 1 cut(s) | 10 |
| MaeI | CTAG | 2 cut(s) | 129, 192 |
| MaeIII | GTNAC | 2 cut(s) | 39, 248 |
| MboII | GAAGA | 3 cut(s) | 69, 106, 147 |
| MluCI | AATT | 3 cut(s) | 82, 186, 380 |
| MlyI | GAGTC | 1 cut(s) | 250 |
| MnlI | CCTC | 5 cut(s) | 19, 236, 315, 318, 321 |
| MseI | TTAA | 1 cut(s) | 394 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 20 |
| NdeI | CATATG | 1 cut(s) | 297 |
| NlaIII | CATG | 2 cut(s) | 256, 292 |
| PfeI | GAWTC | 1 cut(s) | 292 |
| PkrI | GCNGC | 1 cut(s) | 25 |
| PleI | GAGTC | 1 cut(s) | 250 |
| PpsI | GAGTC | 1 cut(s) | 250 |
| PstNI | CAGNNNCTG | 1 cut(s) | 366 |
| SaqAI | TTAA | 1 cut(s) | 394 |
| SatI | GCNGC | 1 cut(s) | 24 |
| SchI | GAGTC | 1 cut(s) | 250 |
| SetI | ASST | 8 cut(s) | 49, 95, 105, 130, 250, 307, 343, 365 |
| SmlI | CTYRAG | 1 cut(s) | 215 |
| SmoI | CTYRAG | 1 cut(s) | 215 |
| Sse9I | AATT | 3 cut(s) | 82, 186, 380 |
| SsiI | CCGC | 1 cut(s) | 141 |
| SspMI | CTAG | 2 cut(s) | 129, 192 |
| TaaI | ACNGT | 1 cut(s) | 239 |
| TasI | AATT | 3 cut(s) | 82, 186, 380 |
| TfiI | GAWTC | 1 cut(s) | 292 |
| Tru1I | TTAA | 1 cut(s) | 394 |
| Tru9I | TTAA | 1 cut(s) | 394 |
| TscAI | CASTG | 1 cut(s) | 268 |
| TseI | GCWGC | 1 cut(s) | 23 |
| TspDTI | ATGAA | 2 cut(s) | 96, 284 |
| TspRI | CASTG | 1 cut(s) | 268 |
| XapI | RAATTY | 1 cut(s) | 82 |
| XspI | CTAG | 2 cut(s) | 129, 192 |