MD06G1002100.v1.1
BZIP Family

BZip transcription factor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
233511 .. 235391
1881 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1002100.v1.1.491

Sequence Viewer

Length: 996 bp
ATGGAATTGGACGCTGATGTTGGATTTCTGGATGAAATCGATTGGGATCTTTGGTTAGACGACGCCTCTATTTCCAATGGATTGGATCATGTCTTTCAGTTGCCAAATCCACCCGTCACGGCGACCGGTTCAACGCCGCTGCCGCCGTCATCATCCACTTCGCCATCTTCAACGGTGGAGGAGCCTGAGCCTCCTTCGAACCCATCCCCGGATTTGCTCGGCGCGATCGAGACCATTTTGATGAAAGACGACGATTTCGACGCCAACAAGGTTCCTTTGGCGGAATCGGGACCCGCTAACAACGACTACTACGACCAATTTTTGGCAGATGCACTCGTCAACTCGCCTTCCACTGACGGTGATTCCAGCGCTTTCCCCGATTCCGACAAAGACAAATTCGACCGCTCGCCGCTCACCGATGACGCCGACGACGATCCTATCTCCAAGAAAAGGAGAAGGCAGTTGAGAAACAAGGATGCGGCCGTGAGATCAAGGGAGAGGAGAAAGATGTATGTGAAGGATCTGGAGATTAAGAGCAAGTATTTTGAAGCTGAATGCAGGAGACTGGGCAATCTGCTCCAGTGCTGCTACGCCGAGAATCATGCTTTACGCTTGAGTTTGCAGATGAACAATGCATATCGACAAGGACATGGTGGTTTGGCCTCAAAGCAGGAGTCTGCTGTGCTCTTTTTGGAACTCCTGCTGTTGGGTTCCCTGCTTTGGTGCCTGGACATCATGTGCCTCCTTGCTCTGCCTCGAACTCTAATGACCCTGCTGCTACATCCACTGAAAAACGTGGACGTGGACGGAAACAAAGCTCTAGGAAGAGTGGGTCAAAGGCCAAGAGGGGGGTCGAGTAAGATGTTTCAACTCCCATCTTTTTCTAAAAGTAGGAGATGCAAATCGTCAAGGACAAAGATGAAACAGAGTGGATTGCCTTGGTTCCTGAGTATTTACGTGAACTCTGCCCTCCCTCCTCTAATGTTAATAACTTAA

Protein Analysis

332

Amino Acids

36.76

Weight (kDa)

5.27

Isoelectric Point (pI)

65.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 149 - 190 7.9e-08 bZIP transcription factor
bZIP_2 PF07716 149 - 189 1.7e-06 Basic region leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 723
AccB7I CCANNNNNTGG 1 cut(s) 322
AccBSI CCGCTC 2 cut(s) 405, 412
AccII CGCG 1 cut(s) 224
AciI CCGC 7 cut(s) 137, 143, 281, 294, 403, 410, 479
AclWI GGATC 4 cut(s) 54, 93, 428, 528
AcoI YGGCCR 1 cut(s) 480
AcsI RAATTY 1 cut(s) 395
AcyI GRCGYC 3 cut(s) 63, 261, 423
AfeI AGCGCT 1 cut(s) 370
AfiI CCNNNNNNNGG 6 cut(s) 208, 322, 450, 706, 720, 848
AgeI ACCGGT 1 cut(s) 125
AgsI TTSAA 4 cut(s) 132, 171, 548, 869
AjiI CACGTC 1 cut(s) 802
AjnI CCWGG 1 cut(s) 726
AluBI AGCT 2 cut(s) 551, 818
AluI AGCT 2 cut(s) 551, 818
Alw21I GWGCWC 1 cut(s) 687
Alw26I GTCTC 2 cut(s) 224, 556
AlwI GGATC 4 cut(s) 54, 93, 428, 528
Aor51HI AGCGCT 1 cut(s) 370
AoxI GGCC 3 cut(s) 480, 660, 839
ApeKI GCWGC 3 cut(s) 139, 585, 775
ApoI RAATTY 1 cut(s) 395
ArsI GACNNNNNNTTYG 4 cut(s) 239, 271, 659, 691
AsiGI ACCGGT 1 cut(s) 125
AspLEI GCGC 2 cut(s) 224, 371
AspS9I GGNCC 1 cut(s) 290
AsuC2I CCSGG 1 cut(s) 209
AsuHPI GGTGA 2 cut(s) 371, 406
AsuII TTCGAA 1 cut(s) 197
AvaII GGWCC 1 cut(s) 290
BanI GGYRCC 1 cut(s) 723
Bbv12I GWGCWC 1 cut(s) 687
BbvI GCAGC 3 cut(s) 126, 572, 762
BccI CCATC 3 cut(s) 172, 211, 883
BceAI ACGGC 3 cut(s) 130, 135, 467
BcgI CGANNNNNNTGC 2 cut(s) 584, 618
BciT130I CCWGG 1 cut(s) 728
BcnI CCSGG 1 cut(s) 209
BcoDI GTCTC 2 cut(s) 224, 556
BfaI CTAG 1 cut(s) 821
BfoI RGCGCY 1 cut(s) 372
BisI GCNGC 7 cut(s) 137, 140, 143, 410, 480, 586, 776
BlsI GCNGC 7 cut(s) 138, 141, 144, 411, 481, 587, 777
Bme1390I CCNGG 2 cut(s) 209, 728
Bme18I GGWCC 1 cut(s) 290
BmgBI CACGTC 1 cut(s) 802
BmgT120I GGNCC 1 cut(s) 290
BmiI GGNNCC 7 cut(s) 183, 273, 291, 292, 712, 725, 944
BmrFI CCNGG 2 cut(s) 209, 728
BmrI ACTGGG 1 cut(s) 575
BmsI GCATC 3 cut(s) 319, 466, 887
BmuI ACTGGG 1 cut(s) 575
BpmI CTGGAG 2 cut(s) 545, 563
Bpu10I CCTNAGC 1 cut(s) 186
Bpu14I TTCGAA 1 cut(s) 197
BpuEI CTTGAG 1 cut(s) 634
BpuMI CCSGG 1 cut(s) 209
Bsa29I ATCGAT 1 cut(s) 39
BsaAI YACGTR 1 cut(s) 958
BsaBI GATNNNNATC 2 cut(s) 45, 901
BsaHI GRCGYC 3 cut(s) 63, 261, 423
BsaI GGTCTC 1 cut(s) 224
BsaJI CCNNGG 2 cut(s) 207, 938
BsaWI WCCGGW 1 cut(s) 125
Bsc4I CCNNNNNNNGG 6 cut(s) 208, 322, 450, 706, 720, 848
Bse118I RCCGGY 1 cut(s) 125
Bse1I ACTGG 2 cut(s) 570, 580
Bse8I GATNNNNATC 2 cut(s) 45, 901
BseBI CCWGG 1 cut(s) 728
BseCI ATCGAT 1 cut(s) 39
BseDI CCNNGG 2 cut(s) 207, 938
BseGI GGATG 5 cut(s) 37, 152, 203, 481, 781
BseJI GATNNNNATC 2 cut(s) 45, 901
BseLI CCNNNNNNNGG 6 cut(s) 208, 322, 450, 706, 720, 848
BseMII CTCAG 2 cut(s) 177, 938
BseNI ACTGG 2 cut(s) 570, 580
BseRI GAGGAG 3 cut(s) 194, 514, 966
BseX3I CGGCCG 1 cut(s) 480
BseXI GCAGC 3 cut(s) 126, 572, 762
Bsh1236I CGCG 1 cut(s) 224
Bsh1285I CGRYCG 4 cut(s) 126, 228, 403, 483
BshFI GGCC 3 cut(s) 482, 662, 841
BshNI GGYRCC 1 cut(s) 723
BshTI ACCGGT 1 cut(s) 125
BshVI ATCGAT 1 cut(s) 39
BsiEI CGRYCG 4 cut(s) 126, 228, 403, 483
BsiHKAI GWGCWC 1 cut(s) 687
BsiSI CCGG 2 cut(s) 126, 209
BslFI GGGAC 1 cut(s) 303
BslI CCNNNNNNNGG 6 cut(s) 208, 322, 450, 706, 720, 848
BsmAI GTCTC 2 cut(s) 224, 556
BsmFI GGGAC 1 cut(s) 303
BsmI GAATGC 1 cut(s) 560
BsnI GGCC 3 cut(s) 482, 662, 841
Bso31I GGTCTC 1 cut(s) 224
Bsp119I TTCGAA 1 cut(s) 197
Bsp1286I GDGCHC 1 cut(s) 687
Bsp143I GATC 6 cut(s) 46, 85, 225, 433, 488, 520
BspACI CCGC 7 cut(s) 137, 143, 281, 294, 403, 410, 479
BspANI GGCC 3 cut(s) 482, 662, 841
BspCNI CTCAG 2 cut(s) 178, 939
BspDI ATCGAT 1 cut(s) 39
BspFNI CGCG 1 cut(s) 224
BspLI GGNNCC 7 cut(s) 183, 273, 291, 292, 712, 725, 944
BspPI GGATC 4 cut(s) 54, 93, 428, 528
BspT104I TTCGAA 1 cut(s) 197
BspT107I GGYRCC 1 cut(s) 723
BspTNI GGTCTC 1 cut(s) 224
BsrBI CCGCTC 2 cut(s) 405, 412
BsrFI RCCGGY 1 cut(s) 125
BsrI ACTGG 2 cut(s) 570, 580
BssAI RCCGGY 1 cut(s) 125
BssECI CCNNGG 2 cut(s) 207, 938
BssMI GATC 6 cut(s) 46, 85, 225, 433, 488, 520
BssNI GRCGYC 3 cut(s) 63, 261, 423
BssT1I CCWWGG 1 cut(s) 938
Bst2UI CCWGG 1 cut(s) 728
Bst4CI ACNGT 2 cut(s) 175, 359
Bst6I CTCTTC 1 cut(s) 820
BstACI GRCGYC 3 cut(s) 63, 261, 423
BstBAI YACGTR 1 cut(s) 958
BstBI TTCGAA 1 cut(s) 197
BstC8I GCNNGC 1 cut(s) 407
BstDEI CTNAG 2 cut(s) 186, 947
BstF5I GGATG 5 cut(s) 37, 152, 203, 481, 781
BstFNI CGCG 1 cut(s) 224
BstH2I RGCGCY 1 cut(s) 372
BstHHI GCGC 2 cut(s) 224, 371
BstKTI GATC 6 cut(s) 49, 88, 228, 436, 491, 523
BstMAI GTCTC 2 cut(s) 224, 556
BstMBI GATC 6 cut(s) 46, 85, 225, 433, 488, 520
BstMCI CGRYCG 4 cut(s) 126, 228, 403, 483
BstMWI GCNNNNNNNGC 1 cut(s) 142
BstNI CCWGG 1 cut(s) 728
BstSCI CCNGG 2 cut(s) 207, 726
BstUI CGCG 1 cut(s) 224
BstV1I GCAGC 3 cut(s) 126, 572, 762
BstX2I RGATCY 2 cut(s) 46, 520
BstXI CCANNNNNNTGG 1 cut(s) 82
BstYI RGATCY 2 cut(s) 46, 520
BstZI CGGCCG 1 cut(s) 480
Bsu15I ATCGAT 1 cut(s) 39
BsuRI GGCC 3 cut(s) 482, 662, 841
BsuTUI ATCGAT 1 cut(s) 39
BtrI CACGTC 1 cut(s) 802
BtsCI GGATG 5 cut(s) 37, 152, 203, 481, 781
BtsIMutI CAGTG 3 cut(s) 351, 587, 785
Cac8I GCNNGC 1 cut(s) 407
CfoI GCGC 2 cut(s) 224, 371
Cfr10I RCCGGY 1 cut(s) 125
Cfr13I GGNCC 1 cut(s) 290
ClaI ATCGAT 1 cut(s) 39
CseI GACGC 4 cut(s) 20, 71, 269, 431
CspAI ACCGGT 1 cut(s) 125
CviAII CATG 4 cut(s) 89, 602, 650, 736
CviJI RGCY 7 cut(s) 184, 190, 482, 551, 662, 818, 841
CviKI_1 RGCY 7 cut(s) 184, 190, 482, 551, 662, 818, 841
DdeI CTNAG 2 cut(s) 186, 947
DpnI GATC 6 cut(s) 48, 87, 227, 435, 490, 522
DpnII GATC 6 cut(s) 46, 85, 225, 433, 488, 520
EaeI YGGCCR 1 cut(s) 480
EagI CGGCCG 1 cut(s) 480
Eam1104I CTCTTC 1 cut(s) 820
EarI CTCTTC 1 cut(s) 820
EciI GGCGGA 1 cut(s) 296
EclXI CGGCCG 1 cut(s) 480
Eco130I CCWWGG 1 cut(s) 938
Eco31I GGTCTC 1 cut(s) 224
Eco47I GGWCC 1 cut(s) 290
Eco47III AGCGCT 1 cut(s) 370
Eco52I CGGCCG 1 cut(s) 480
EcoO109I RGGNCCY 1 cut(s) 290
EcoRII CCWGG 1 cut(s) 726
EcoT14I CCWWGG 1 cut(s) 938
EcoT22I ATGCAT 1 cut(s) 637
ErhI CCWWGG 1 cut(s) 938
FaeI CATG 4 cut(s) 92, 605, 653, 739
FaiI YATR 6 cut(s) 90, 513, 603, 637, 651, 737
FaqI GGGAC 1 cut(s) 303
FatI CATG 4 cut(s) 88, 601, 649, 735
FauI CCCGC 1 cut(s) 301
Fnu4HI GCNGC 7 cut(s) 137, 140, 143, 410, 480, 586, 776
FokI GGATG 5 cut(s) 44, 139, 190, 488, 768
Fsp4HI GCNGC 7 cut(s) 137, 140, 143, 410, 480, 586, 776
FspBI CTAG 1 cut(s) 821
GlaI GCGC 2 cut(s) 223, 370
GluI GCNGC 7 cut(s) 137, 140, 143, 410, 480, 586, 776
GsuI CTGGAG 2 cut(s) 545, 563
HaeII RGCGCY 1 cut(s) 372
HaeIII GGCC 3 cut(s) 482, 662, 841
HapII CCGG 2 cut(s) 126, 209
HgaI GACGC 4 cut(s) 20, 71, 269, 431
HhaI GCGC 2 cut(s) 224, 371
Hin1I GRCGYC 3 cut(s) 63, 261, 423
Hin1II CATG 4 cut(s) 92, 605, 653, 739
Hin6I GCGC 2 cut(s) 222, 369
HinP1I GCGC 2 cut(s) 222, 369
HincII GTYRAC 1 cut(s) 340
HindII GTYRAC 1 cut(s) 340
HinfI GANTC 5 cut(s) 284, 362, 380, 598, 674
HpaII CCGG 2 cut(s) 126, 209
HphI GGTGA 2 cut(s) 371, 406
Hpy166II GTNNAC 4 cut(s) 340, 799, 805, 961
Hpy188I TCNGA 1 cut(s) 385
Hpy188III TCNNGA 5 cut(s) 29, 229, 288, 524, 946
Hpy8I GTNNAC 4 cut(s) 340, 799, 805, 961
Hpy99I CGWCG 5 cut(s) 65, 254, 263, 431, 434
HpyAV CCTTC 4 cut(s) 204, 357, 450, 511
HpyCH4III ACNGT 2 cut(s) 175, 359
HpyCH4IV ACGT 3 cut(s) 795, 801, 957
HpyCH4V TGCA 5 cut(s) 332, 558, 622, 635, 900
HpyF10VI GCNNNNNNNGC 1 cut(s) 142
HpyF3I CTNAG 2 cut(s) 186, 947
HpySE526I ACGT 3 cut(s) 795, 801, 957
Hsp92I GRCGYC 3 cut(s) 63, 261, 423
Hsp92II CATG 4 cut(s) 92, 605, 653, 739
HspAI GCGC 2 cut(s) 222, 369
KflI GGGWCCC 1 cut(s) 290
Kzo9I GATC 6 cut(s) 46, 85, 225, 433, 488, 520
LmnI GCTCC 2 cut(s) 181, 582
Lsp1109I GCAGC 3 cut(s) 126, 572, 762
LweI GCATC 3 cut(s) 319, 466, 887
MaeI CTAG 1 cut(s) 821
MaeII ACGT 3 cut(s) 795, 801, 957
MaeIII GTNAC 1 cut(s) 115
MalI GATC 6 cut(s) 48, 87, 227, 435, 490, 522
MbiI CCGCTC 2 cut(s) 405, 412
MboI GATC 6 cut(s) 46, 85, 225, 433, 488, 520
MboII GAAGA 2 cut(s) 159, 837
MflI RGATCY 2 cut(s) 46, 520
MhlI GDGCHC 1 cut(s) 687
MluCI AATT 3 cut(s) 5, 317, 395
MlyI GAGTC 1 cut(s) 683
MmeI TCCRAC 1 cut(s) 408
Mph1103I ATGCAT 1 cut(s) 637
MseI TTAA 3 cut(s) 531, 986, 994
MslI CAYNNNNRTG 1 cut(s) 239
MspA1I CMGCKG 1 cut(s) 139
MspI CCGG 2 cut(s) 126, 209
MspR9I CCNGG 2 cut(s) 209, 728
Mva1269I GAATGC 1 cut(s) 560
MvaI CCWGG 1 cut(s) 728
MvnI CGCG 1 cut(s) 224
MwoI GCNNNNNNNGC 1 cut(s) 142
NciI CCSGG 1 cut(s) 209
NdeII GATC 6 cut(s) 46, 85, 225, 433, 488, 520
NlaIII CATG 4 cut(s) 92, 605, 653, 739
NlaIV GGNNCC 7 cut(s) 183, 273, 291, 292, 712, 725, 944
NmeAIII GCCGAG 2 cut(s) 198, 619
NmuCI GTSAC 1 cut(s) 115
NsiI ATGCAT 1 cut(s) 637
NspV TTCGAA 1 cut(s) 197
PcsI WCGNNNNNNNCGW 4 cut(s) 225, 255, 309, 429
PctI GAATGC 1 cut(s) 560
PfeI GAWTC 4 cut(s) 284, 362, 380, 598
PflMI CCANNNNNTGG 1 cut(s) 322
PinAI ACCGGT 1 cut(s) 125
PkrI GCNGC 7 cut(s) 138, 141, 144, 411, 481, 587, 777
Ple19I CGATCG 1 cut(s) 228
PleI GAGTC 1 cut(s) 682
PpsI GAGTC 1 cut(s) 682
Ppu21I YACGTR 1 cut(s) 958
PpuMI RGGWCCY 1 cut(s) 290
Psp5II RGGWCCY 1 cut(s) 290
Psp6I CCWGG 1 cut(s) 726
PspGI CCWGG 1 cut(s) 726
PspN4I GGNNCC 7 cut(s) 183, 273, 291, 292, 712, 725, 944
PspPI GGNCC 1 cut(s) 290
PspPPI RGGWCCY 1 cut(s) 290
PsuI RGATCY 2 cut(s) 46, 520
PvuI CGATCG 1 cut(s) 228
RseI CAYNNNNRTG 1 cut(s) 239
SaqAI TTAA 3 cut(s) 531, 986, 994
SatI GCNGC 7 cut(s) 137, 140, 143, 410, 480, 586, 776
Sau3AI GATC 6 cut(s) 46, 85, 225, 433, 488, 520
Sau96I GGNCC 1 cut(s) 290
SchI GAGTC 1 cut(s) 683
ScrFI CCNGG 2 cut(s) 209, 728
SduI GDGCHC 1 cut(s) 687
SetI ASST 6 cut(s) 273, 553, 798, 804, 820, 960
SfaNI GCATC 3 cut(s) 319, 466, 887
SfuI TTCGAA 1 cut(s) 197
SinI GGWCC 1 cut(s) 290
SmiMI CAYNNNNRTG 1 cut(s) 239
SmlI CTYRAG 1 cut(s) 613
SmoI CTYRAG 1 cut(s) 613
Sse9I AATT 3 cut(s) 5, 317, 395
SsiI CCGC 7 cut(s) 137, 143, 281, 294, 403, 410, 479
SspMI CTAG 1 cut(s) 821
StyD4I CCNGG 2 cut(s) 207, 726
StyI CCWWGG 1 cut(s) 938
TaaI ACNGT 2 cut(s) 175, 359
TaiI ACGT 3 cut(s) 798, 804, 960
TaqI TCGA 8 cut(s) 39, 197, 228, 258, 399, 640, 757, 854
TasI AATT 3 cut(s) 5, 317, 395
TauI GCSGC 4 cut(s) 139, 145, 412, 482
TfiI GAWTC 4 cut(s) 284, 362, 380, 598
Tru1I TTAA 3 cut(s) 531, 986, 994
Tru9I TTAA 3 cut(s) 531, 986, 994
TscAI CASTG 3 cut(s) 358, 587, 792
TseFI GTSAC 1 cut(s) 115
TseI GCWGC 3 cut(s) 139, 585, 775
Tsp45I GTSAC 1 cut(s) 115
TspDTI ATGAA 4 cut(s) 48, 257, 641, 935
TspGWI ACGGA 1 cut(s) 822
TspRI CASTG 3 cut(s) 358, 587, 792
Van91I CCANNNNNTGG 1 cut(s) 322
VpaK11BI GGWCC 1 cut(s) 290
XapI RAATTY 1 cut(s) 395
XspI CTAG 1 cut(s) 821
Zsp2I ATGCAT 1 cut(s) 637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.