Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0007279

Physical Location & Seq

Genomic Coordinates Reverse (-)

34324910 .. 34326668

Gene Structure 1759 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG307200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 963 bp

ATGGAATTCGACGGAGGCCTTGAATTTTTGGACAGCGGCGTTGACGTGATCGGAGAGATCGATTGGGATTTCGTATTCGACGACGCGAAGGGGTTAGATTTGTTGCAGGAGTTGGAGAACCCGGCCGCCACGGCGGCGACTGGGGCTTCGCCTTCTTCGTCGTCGTCATCGACGGTGGAGGATGCTCCGGCCAACCCGGAGACGGGATCGATTGACACGTGGATCGGCGAGGTTGAGGACATGCTGATGAAAGACGACGACGTCAGCAAGGTGGAGGCTTCGGAGGAGCCGCCTAAGGAGTACTATGAGAATTTTTTGGCGGATGTACTCGTGGACTCGCCGTCGACGGAATCTCCGGCCGACGTGGATTCGAATTCAAACGGCTGCGCTGAGTCGGAGAAGGAGAAAACCGATGGATCGCCGCTCAACAATGATACGGATGCTGACGCAGACGCTGACGATCCTGTCTCCAAGAAAAGGAGAAGGCAGTTGAGAAATAAGGATGCAGCGATGAAATCAAGGGAGAGGAGAAAAATGTATGTCACAGATCTGGAGATGAAGAGCAAGTATTTGGAAGGCGAATGCAGGAGGCTGGGGCGTTTGCTTCAGTGCTGCTATGCCGAGAACCATGCTTTGCGACTTAGTCTACAGATGGGCAATGCATATGGCCGTGGTGTTTCTGGTACCAAGCAGGAGTCTGCTGTGCTCTTGGAACTCCTGCTGTTGGGTTCCCTGCTTTGGTTCCTGGACCTCACGTGCCTATTCACCCTGCCTCTAATGCCCCACCTACTACTACTAACTCTAAATCAAGAGCAGGCAAACAAAGCTCTAGAAAGTGTGGGTCCAAGAGCAAGAGGGGAAGTAAGTAAGGTGGTTTTGGCGCTTCAGTCTCAATCTTTTGTAAAGACTAGGAGGTGCAAGGCGTCCAGGACGAAGATGAAATATGCTTTCCTTGTCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0006355 GO:0006950 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0009889 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0030968 GO:0031323 GO:0031326 GO:0031984 GO:0033554 GO:0034620 GO:0034976 GO:0035966 GO:0035967 GO:0042175 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0080090 GO:0098827 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1 bZIP_2

Protein Analysis

320

Amino Acids

35.25

Weight (kDa)

4.63

Isoelectric Point (pI)

58.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_2	PF07716	157 - 198	1.1e-06	Basic region leucine zipper
bZIP_1	PF00170	158 - 198	9.8e-08	bZIP transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007279)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42990
fragaria_vesca	FvH4_5g26440
malus_domestica	MD06G1002100.v1.1
prunus_persica	Prupe.5G003000_v2.0.a1
pyrus_communis	pycom06g00220
rosa_chinensis	RchiOBHm_Chr7g0217321
rosa_laevigata	RLG00000002495 RLG00000003279 RLG00000008982 RLG00000010053
rosa_multiflora	Rmu_co8478867.1_g000001 Rmu_sc0002399.1_g000009 Rmu_sc0002842.1_g000001 Rmu_sc0007784.1_g000005 Rmu_sc0007843.1_g000003
rosa_roxburghii	Rroxscaffold_3G00242450
rosa_rugosa	Rorug02G0159300 Rorug07G0168000
rosa_samantha	Rh7AG307200 Rh7BG298100 Rh7CG185700 Rh7CG326200 Rh7DG306800
rosa_wichuraiana	Rw7G026080 Rw7G029750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	260, 464
AatII	GACGTC	1 cut(s)	264
Acc65I	GGTACC	1 cut(s)	683
AccB1I	GGYRCC	1 cut(s)	683
AccBSI	CCGCTC	1 cut(s)	424
AccI	GTMKAC	2 cut(s)	344, 646
AccII	CGCG	1 cut(s)	86
AciI	CCGC	6 cut(s)	36, 126, 134, 290, 320, 422
AclWI	GGATC	4 cut(s)	214, 230, 424, 455
AcoI	YGGCCR	4 cut(s)	123, 189, 357, 667
AcsI	RAATTY	4 cut(s)	5, 23, 310, 373
AcuI	CTGAAG	2 cut(s)	590, 869
AcvI	CACGTG	2 cut(s)	219, 756
AcyI	GRCGYC	2 cut(s)	261, 923
AfaI	GTAC	3 cut(s)	302, 327, 685
AfiI	CCNNNNNNNGG	5 cut(s)	202, 203, 477, 724, 738
AflIII	ACRYGT	1 cut(s)	216
AgsI	TTSAA	2 cut(s)	23, 378
AhdI	GACNNNNNGTC	1 cut(s)	340
AjiI	CACGTC	2 cut(s)	46, 364
AjnI	CCWGG	2 cut(s)	744, 926
AluBI	AGCT	1 cut(s)	827
AluI	AGCT	1 cut(s)	827
Alw21I	GWGCWC	1 cut(s)	708
Alw26I	GTCTC	3 cut(s)	194, 472, 894
AlwI	GGATC	4 cut(s)	214, 230, 424, 455
AlwNI	CAGNNNCTG	1 cut(s)	455
AoxI	GGCC	5 cut(s)	16, 123, 189, 357, 667
ApeKI	GCWGC	3 cut(s)	384, 506, 612
ApoI	RAATTY	4 cut(s)	5, 23, 310, 373
ArsI	GACNNNNNNTTYG	2 cut(s)	130, 162
Asp718I	GGTACC	1 cut(s)	683
AspLEI	GCGC	2 cut(s)	389, 883
AspS9I	GGNCC	2 cut(s)	748, 842
AsuC2I	CCSGG	2 cut(s)	122, 197
AsuHPI	GGTGA	1 cut(s)	757
AsuII	TTCGAA	1 cut(s)	371
AvaII	GGWCC	2 cut(s)	748, 842
AxyI	CCTNAGG	1 cut(s)	294
BanI	GGYRCC	1 cut(s)	683
BauI	CACGAG	1 cut(s)	329
BbrPI	CACGTG	2 cut(s)	219, 756
Bbv12I	GWGCWC	1 cut(s)	708
BbvI	GCAGC	3 cut(s)	371, 518, 599
BccI	CCATC	2 cut(s)	407, 646
BceAI	ACGGC	4 cut(s)	147, 325, 397, 654
BcgI	CGANNNNNNTGC	2 cut(s)	611, 645
BciT130I	CCWGG	2 cut(s)	746, 928
BcnI	CCSGG	2 cut(s)	122, 197
BcoDI	GTCTC	3 cut(s)	194, 472, 894
BfaI	CTAG	2 cut(s)	830, 909
BfmI	CTRYAG	1 cut(s)	647
BfoI	RGCGCY	1 cut(s)	884
BglI	GCCNNNNNGGC	2 cut(s)	131, 134
BglII	AGATCT	1 cut(s)	547
BisI	GCNGC	8 cut(s)	37, 126, 135, 290, 385, 422, 507, 613
BlsI	GCNGC	8 cut(s)	38, 127, 136, 291, 386, 423, 508, 614
BmcAI	AGTACT	1 cut(s)	302
Bme1390I	CCNGG	4 cut(s)	122, 197, 746, 928
Bme18I	GGWCC	2 cut(s)	748, 842
BmeRI	GACNNNNNGTC	1 cut(s)	340
BmgBI	CACGTC	2 cut(s)	46, 364
BmgT120I	GGNCC	2 cut(s)	748, 842
BmiI	GGNNCC	5 cut(s)	288, 685, 730, 743, 843
BmrFI	CCNGG	4 cut(s)	122, 197, 746, 928
BmrI	ACTGGG	1 cut(s)	150
BmsI	GCATC	3 cut(s)	172, 430, 493
BmuI	ACTGGG	1 cut(s)	150
BpmI	CTGGAG	1 cut(s)	572
Bpu14I	TTCGAA	1 cut(s)	371
BpuMI	CCSGG	2 cut(s)	122, 197
Bsa29I	ATCGAT	2 cut(s)	60, 209
BsaAI	YACGTR	2 cut(s)	219, 756
BsaHI	GRCGYC	2 cut(s)	261, 923
BsaJI	CCNNGG	2 cut(s)	129, 670
BsaXI	ACNNNNNCTCC	2 cut(s)	337, 367
Bsc4I	CCNNNNNNNGG	5 cut(s)	202, 203, 477, 724, 738
Bse1I	ACTGG	1 cut(s)	145
Bse21I	CCTNAGG	1 cut(s)	294
Bse3DI	GCAATG	1 cut(s)	664
BseBI	CCWGG	2 cut(s)	746, 928
BseCI	ATCGAT	2 cut(s)	60, 209
BseDI	CCNNGG	2 cut(s)	129, 670
BseGI	GGATG	4 cut(s)	187, 328, 445, 508
BseLI	CCNNNNNNNGG	5 cut(s)	202, 203, 477, 724, 738
BseMI	GCAATG	1 cut(s)	664
BseMII	CTCAG	1 cut(s)	381
BseNI	ACTGG	1 cut(s)	145
BseRI	GAGGAG	2 cut(s)	299, 541
BseX3I	CGGCCG	2 cut(s)	123, 357
BseXI	GCAGC	3 cut(s)	371, 518, 599
BseYI	CCCAGC	1 cut(s)	592
Bsh1236I	CGCG	1 cut(s)	86
Bsh1285I	CGRYCG	2 cut(s)	126, 360
BshFI	GGCC	5 cut(s)	18, 125, 191, 359, 669
BshNI	GGYRCC	1 cut(s)	683
BshVI	ATCGAT	2 cut(s)	60, 209
BsiEI	CGRYCG	2 cut(s)	126, 360
BsiHKAI	GWGCWC	1 cut(s)	708
BsiSI	CCGG	4 cut(s)	122, 188, 197, 356
BslI	CCNNNNNNNGG	5 cut(s)	202, 203, 477, 724, 738
BsmAI	GTCTC	3 cut(s)	194, 472, 894
BsmBI	CGTCTC	1 cut(s)	194
BsmI	GAATGC	1 cut(s)	587
BsnI	GGCC	5 cut(s)	18, 125, 191, 359, 669
Bsp119I	TTCGAA	1 cut(s)	371
Bsp1286I	GDGCHC	1 cut(s)	708
Bsp143I	GATC	7 cut(s)	48, 57, 206, 222, 416, 460, 547
BspACI	CCGC	6 cut(s)	36, 126, 134, 290, 320, 422
BspANI	GGCC	5 cut(s)	18, 125, 191, 359, 669
BspCNI	CTCAG	1 cut(s)	382
BspDI	ATCGAT	2 cut(s)	60, 209
BspFNI	CGCG	1 cut(s)	86
BspLI	GGNNCC	5 cut(s)	288, 685, 730, 743, 843
BspPI	GGATC	4 cut(s)	214, 230, 424, 455
BspQI	GCTCTTC	1 cut(s)	554
BspT104I	TTCGAA	1 cut(s)	371
BspT107I	GGYRCC	1 cut(s)	683
BsrBI	CCGCTC	1 cut(s)	424
BsrDI	GCAATG	1 cut(s)	664
BsrI	ACTGG	1 cut(s)	145
BssECI	CCNNGG	2 cut(s)	129, 670
BssMI	GATC	7 cut(s)	48, 57, 206, 222, 416, 460, 547
BssNI	GRCGYC	2 cut(s)	261, 923
BssSI	CACGAG	1 cut(s)	329
Bst2BI	CACGAG	1 cut(s)	329
Bst2UI	CCWGG	2 cut(s)	746, 928
Bst4CI	ACNGT	1 cut(s)	175
Bst6I	CTCTTC	1 cut(s)	554
BstACI	GRCGYC	2 cut(s)	261, 923
BstBAI	YACGTR	2 cut(s)	219, 756
BstBI	TTCGAA	1 cut(s)	371
BstC8I	GCNNGC	1 cut(s)	816
BstDEI	CTNAG	3 cut(s)	294, 390, 641
BstDSI	CCRYGG	2 cut(s)	129, 670
BstF5I	GGATG	4 cut(s)	187, 328, 445, 508
BstFNI	CGCG	1 cut(s)	86
BstH2I	RGCGCY	1 cut(s)	884
BstHHI	GCGC	2 cut(s)	389, 883
BstKTI	GATC	7 cut(s)	51, 60, 209, 225, 419, 463, 550
BstMAI	GTCTC	3 cut(s)	194, 472, 894
BstMBI	GATC	7 cut(s)	48, 57, 206, 222, 416, 460, 547
BstMCI	CGRYCG	2 cut(s)	126, 360
BstMWI	GCNNNNNNNGC	5 cut(s)	131, 134, 143, 778, 824
BstNI	CCWGG	2 cut(s)	746, 928
BstNSI	RCATGY	1 cut(s)	244
BstSCI	CCNGG	4 cut(s)	120, 195, 744, 926
BstSFI	CTRYAG	1 cut(s)	647
BstUI	CGCG	1 cut(s)	86
BstV1I	GCAGC	3 cut(s)	371, 518, 599
BstX2I	RGATCY	1 cut(s)	547
BstYI	RGATCY	1 cut(s)	547
BstZI	CGGCCG	2 cut(s)	123, 357
Bsu15I	ATCGAT	2 cut(s)	60, 209
Bsu36I	CCTNAGG	1 cut(s)	294
BsuRI	GGCC	5 cut(s)	18, 125, 191, 359, 669
BsuTUI	ATCGAT	2 cut(s)	60, 209
BtgI	CCRYGG	2 cut(s)	129, 670
BtgZI	GCGATG	1 cut(s)	524
BtrI	CACGTC	2 cut(s)	46, 364
BtsCI	GGATG	4 cut(s)	187, 328, 445, 508
BtsIMutI	CAGTG	1 cut(s)	614
Cac8I	GCNNGC	1 cut(s)	816
CaiI	CAGNNNCTG	1 cut(s)	455
CfoI	GCGC	2 cut(s)	389, 883
Cfr13I	GGNCC	2 cut(s)	748, 842
ClaI	ATCGAT	2 cut(s)	60, 209
CseI	GACGC	4 cut(s)	92, 455, 461, 912
Csp6I	GTAC	3 cut(s)	301, 326, 684
CviAII	CATG	2 cut(s)	241, 629
CviQI	GTAC	3 cut(s)	301, 326, 684
DdeI	CTNAG	3 cut(s)	294, 390, 641
DpnI	GATC	7 cut(s)	50, 59, 208, 224, 418, 462, 549
DpnII	GATC	7 cut(s)	48, 57, 206, 222, 416, 460, 547
DrdI	GACNNNNNNGTC	2 cut(s)	260, 464
DriI	GACNNNNNGTC	1 cut(s)	340
DseDI	GACNNNNNNGTC	2 cut(s)	260, 464
EaeI	YGGCCR	4 cut(s)	123, 189, 357, 667
EagI	CGGCCG	2 cut(s)	123, 357
Eam1104I	CTCTTC	1 cut(s)	554
Eam1105I	GACNNNNNGTC	1 cut(s)	340
EarI	CTCTTC	1 cut(s)	554
EciI	GGCGGA	1 cut(s)	335
EclXI	CGGCCG	2 cut(s)	123, 357
Eco147I	AGGCCT	1 cut(s)	18
Eco47I	GGWCC	2 cut(s)	748, 842
Eco52I	CGGCCG	2 cut(s)	123, 357
Eco57I	CTGAAG	2 cut(s)	590, 869
Eco72I	CACGTG	2 cut(s)	219, 756
Eco81I	CCTNAGG	1 cut(s)	294
EcoRI	GAATTC	2 cut(s)	5, 373
EcoRII	CCWGG	2 cut(s)	744, 926
EcoT22I	ATGCAT	1 cut(s)	664
Esp3I	CGTCTC	1 cut(s)	194
FaeI	CATG	2 cut(s)	244, 632
FaiI	YATR	8 cut(s)	242, 306, 540, 618, 630, 664, 666, 945
FatI	CATG	2 cut(s)	240, 628
FauNDI	CATATG	1 cut(s)	664
FblI	GTMKAC	2 cut(s)	344, 646
Fnu4HI	GCNGC	8 cut(s)	37, 126, 135, 290, 385, 422, 507, 613
FokI	GGATG	4 cut(s)	194, 335, 452, 515
Fsp4HI	GCNGC	8 cut(s)	37, 126, 135, 290, 385, 422, 507, 613
FspBI	CTAG	2 cut(s)	830, 909
GlaI	GCGC	2 cut(s)	388, 882
GluI	GCNGC	8 cut(s)	37, 126, 135, 290, 385, 422, 507, 613
GsaI	CCCAGC	1 cut(s)	596
GsuI	CTGGAG	1 cut(s)	572
HaeII	RGCGCY	1 cut(s)	884
HaeIII	GGCC	5 cut(s)	18, 125, 191, 359, 669
HapII	CCGG	4 cut(s)	122, 188, 197, 356
HgaI	GACGC	4 cut(s)	92, 455, 461, 912
HhaI	GCGC	2 cut(s)	389, 883
Hin1I	GRCGYC	2 cut(s)	261, 923
Hin1II	CATG	2 cut(s)	244, 632
Hin6I	GCGC	2 cut(s)	387, 881
HinP1I	GCGC	2 cut(s)	387, 881
HincII	GTYRAC	2 cut(s)	43, 345
HindII	GTYRAC	2 cut(s)	43, 345
HinfI	GANTC	5 cut(s)	335, 350, 368, 392, 695
HpaII	CCGG	4 cut(s)	122, 188, 197, 356
HphI	GGTGA	1 cut(s)	757
Hpy166II	GTNNAC	4 cut(s)	43, 334, 345, 647
Hpy188I	TCNGA	3 cut(s)	53, 283, 397
Hpy188III	TCNNGA	4 cut(s)	551, 809, 830, 960
Hpy8I	GTNNAC	4 cut(s)	43, 334, 345, 647
HpyAV	CCTTC	5 cut(s)	82, 162, 394, 477, 569
HpyCH4III	ACNGT	1 cut(s)	175
HpyCH4IV	ACGT	5 cut(s)	45, 218, 261, 363, 755
HpyCH4V	TGCA	5 cut(s)	106, 506, 585, 662, 918
HpyF10VI	GCNNNNNNNGC	5 cut(s)	131, 134, 143, 778, 824
HpyF3I	CTNAG	3 cut(s)	294, 390, 641
HpySE526I	ACGT	5 cut(s)	45, 218, 261, 363, 755
Hsp92I	GRCGYC	2 cut(s)	261, 923
Hsp92II	CATG	2 cut(s)	244, 632
HspAI	GCGC	2 cut(s)	387, 881
KpnI	GGTACC	1 cut(s)	687
Kzo9I	GATC	7 cut(s)	48, 57, 206, 222, 416, 460, 547
LguI	GCTCTTC	1 cut(s)	554
LmnI	GCTCC	2 cut(s)	190, 286
Lsp1109I	GCAGC	3 cut(s)	371, 518, 599
LweI	GCATC	3 cut(s)	172, 430, 493
MaeI	CTAG	2 cut(s)	830, 909
MaeII	ACGT	5 cut(s)	45, 218, 261, 363, 755
MaeIII	GTNAC	1 cut(s)	541
MalI	GATC	7 cut(s)	50, 59, 208, 224, 418, 462, 549
MbiI	CCGCTC	1 cut(s)	424
MboI	GATC	7 cut(s)	48, 57, 206, 222, 416, 460, 547
MboII	GAAGA	3 cut(s)	147, 571, 946
MflI	RGATCY	1 cut(s)	547
MhlI	GDGCHC	1 cut(s)	708
MluCI	AATT	4 cut(s)	5, 23, 310, 373
MlyI	GAGTC	3 cut(s)	329, 401, 704
MmeI	TCCRAC	2 cut(s)	93, 375
Mph1103I	ATGCAT	1 cut(s)	664
MslI	CAYNNNNRTG	1 cut(s)	245
MspA1I	CMGCKG	1 cut(s)	36
MspI	CCGG	4 cut(s)	122, 188, 197, 356
MspR9I	CCNGG	4 cut(s)	122, 197, 746, 928
Mva1269I	GAATGC	1 cut(s)	587
MvaI	CCWGG	2 cut(s)	746, 928
MvnI	CGCG	1 cut(s)	86
MwoI	GCNNNNNNNGC	5 cut(s)	131, 134, 143, 778, 824
NciI	CCSGG	2 cut(s)	122, 197
NdeI	CATATG	1 cut(s)	664
NdeII	GATC	7 cut(s)	48, 57, 206, 222, 416, 460, 547
NlaIII	CATG	2 cut(s)	244, 632
NlaIV	GGNNCC	5 cut(s)	288, 685, 730, 743, 843
NmeAIII	GCCGAG	1 cut(s)	646
NmuCI	GTSAC	1 cut(s)	541
NsiI	ATGCAT	1 cut(s)	664
NspI	RCATGY	1 cut(s)	244
NspV	TTCGAA	1 cut(s)	371
PceI	AGGCCT	1 cut(s)	18
PciSI	GCTCTTC	1 cut(s)	554
PcsI	WCGNNNNNNNCGW	5 cut(s)	57, 78, 155, 167, 215
PctI	GAATGC	1 cut(s)	587
PfeI	GAWTC	2 cut(s)	350, 368
PflFI	GACNNNGTC	2 cut(s)	260, 642
PfoI	TCCNGGA	2 cut(s)	744, 926
PkrI	GCNGC	8 cut(s)	38, 127, 136, 291, 386, 423, 508, 614
PleI	GAGTC	3 cut(s)	329, 400, 703
PmaCI	CACGTG	2 cut(s)	219, 756
PmlI	CACGTG	2 cut(s)	219, 756
PpsI	GAGTC	3 cut(s)	329, 400, 703
Ppu21I	YACGTR	2 cut(s)	219, 756
Psp6I	CCWGG	2 cut(s)	744, 926
PspCI	CACGTG	2 cut(s)	219, 756
PspFI	CCCAGC	1 cut(s)	592
PspGI	CCWGG	2 cut(s)	744, 926
PspN4I	GGNNCC	5 cut(s)	288, 685, 730, 743, 843
PspPI	GGNCC	2 cut(s)	748, 842
PstNI	CAGNNNCTG	1 cut(s)	455
PsuI	RGATCY	1 cut(s)	547
PsyI	GACNNNGTC	2 cut(s)	260, 642
RsaI	GTAC	3 cut(s)	302, 327, 685
RsaNI	GTAC	3 cut(s)	301, 326, 684
RseI	CAYNNNNRTG	1 cut(s)	245
SalI	GTCGAC	1 cut(s)	343
SapI	GCTCTTC	1 cut(s)	554
SatI	GCNGC	8 cut(s)	37, 126, 135, 290, 385, 422, 507, 613
Sau3AI	GATC	7 cut(s)	48, 57, 206, 222, 416, 460, 547
Sau96I	GGNCC	2 cut(s)	748, 842
ScaI	AGTACT	1 cut(s)	302
SchI	GAGTC	3 cut(s)	329, 401, 704
ScrFI	CCNGG	4 cut(s)	122, 197, 746, 928
SduI	GDGCHC	1 cut(s)	708
SfaNI	GCATC	3 cut(s)	172, 430, 493
SfcI	CTRYAG	1 cut(s)	647
SfuI	TTCGAA	1 cut(s)	371
SgrDI	CGTCGACG	1 cut(s)	343
SinI	GGWCC	2 cut(s)	748, 842
SmiMI	CAYNNNNRTG	1 cut(s)	245
Sse9I	AATT	4 cut(s)	5, 23, 310, 373
SseBI	AGGCCT	1 cut(s)	18
SsiI	CCGC	6 cut(s)	36, 126, 134, 290, 320, 422
SspMI	CTAG	2 cut(s)	830, 909
StuI	AGGCCT	1 cut(s)	18
StyD4I	CCNGG	4 cut(s)	120, 195, 744, 926
TaaI	ACNGT	1 cut(s)	175
TaiI	ACGT	5 cut(s)	48, 221, 264, 366, 758
TaqI	TCGA	7 cut(s)	9, 60, 78, 170, 209, 344, 371
TasI	AATT	4 cut(s)	5, 23, 310, 373
TatI	WGTACW	2 cut(s)	300, 325
TauI	GCSGC	5 cut(s)	39, 128, 137, 292, 424
TfiI	GAWTC	2 cut(s)	350, 368
TscAI	CASTG	1 cut(s)	614
TseFI	GTSAC	1 cut(s)	541
TseI	GCWGC	3 cut(s)	384, 506, 612
Tsp45I	GTSAC	1 cut(s)	541
TspDTI	ATGAA	4 cut(s)	263, 527, 572, 953
TspGWI	ACGGA	3 cut(s)	27, 362, 452
TspRI	CASTG	1 cut(s)	614
Tth111I	GACNNNGTC	2 cut(s)	260, 642
VpaK11BI	GGWCC	2 cut(s)	748, 842
XapI	RAATTY	4 cut(s)	5, 23, 310, 373
XbaI	TCTAGA	1 cut(s)	829
XceI	RCATGY	1 cut(s)	244
XmiI	GTMKAC	2 cut(s)	344, 646
XspI	CTAG	2 cut(s)	830, 909
ZraI	GACGTC	1 cut(s)	262
ZrmI	AGTACT	1 cut(s)	302
Zsp2I	ATGCAT	1 cut(s)	664

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.