pycom06g00220
BZIP Family

BZip transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
223594 .. 224962
1369 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g00220.2

Sequence Viewer

Length: 1002 bp
ATGGAATTGGAAGCTGATGTTGGATTTCTGGATGAAATCGATTGGGATCTTTGGTTAGAGGACGCCTCTATTTCCAATGGATTGGATCATGTCTTTCAGTTGCCAAATCCACCCGTCACGGCGACCGGTTCAACGCCGCTGCCGCCATCATCATCCTCTTCGCCATCTTCAACGGTGGAGGAGCCTGACCCTCCCTCCAACCCATCCCCGGATTTTCTCGGCGCGATCGAGACCATTTTGATGAAAGACGACGATTTCGACGCCAACAAGGTTCCTTTGGCGGAATCGGGACCCGCTAACAACGAGTACTACGACCAATTTTTGGCAGATATACTCGTCAACTCGCCTTCCACTGACCGCGATTCCAACGCTTTCCCCGATTCCGACAAAGACAAATTCGACCGCTCGCCGCTCACAGATGACGCCGACGAAGATCCTATCTCCAAGAAAAGGAGAAGGCAGTTGAGAAACAAGGATGCGGCCGTGAGATCAAGGGAGAGGAGAAAGATGTATGTGAAGGATCTGGAGATTAAGAGCAAGTATTTTGAAGCTGAATGCAGGAGACTGGGGAATCTGCTCCAGTGCTGCTACGCCGAGAATCATGCTTTACGGTTGAGTTTGCAGATGAACAACACATATCGACATGGACATGGTGGTTTGGCCTCAAAGCAGGAGTCTGCTGTGCTCTTTTTGGAACTCCTGCTGTTGGGTTCCCTGCTTTGGTGCCTGGACATCATGTGCCTCCTTGCTCTGCCTCGAACTCTAATGACCCTGCTGTTACATCTACATCCACTGAAAAACGTGGACGTGGACGGAAACAAAGCTCTAGGAAGTGTGGGTCAAAGGCCAAGAGGGGGGTCGAGTAAGATGTTTCAACTCCGATCTTTTTCTAAAAGTAGGAGATGCAAATCGTCAAGGACAAAGATGAAACAGAGTGGGTTGCCTTGGTTCCTGAGTGTTTACGTGAACTCTACTCTCCCTCCTCTAATGTTAATAACTTAA

Protein Analysis

334

Amino Acids

37.29

Weight (kDa)

5.62

Isoelectric Point (pI)

66.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 723
AccB7I CCANNNNNTGG 1 cut(s) 322
AccBSI CCGCTC 2 cut(s) 405, 412
AccII CGCG 2 cut(s) 224, 360
AciI CCGC 8 cut(s) 137, 143, 281, 294, 358, 403, 410, 479
AclWI GGATC 4 cut(s) 54, 93, 428, 528
AcoI YGGCCR 1 cut(s) 480
AcsI RAATTY 1 cut(s) 395
AcyI GRCGYC 3 cut(s) 63, 261, 423
AfaI GTAC 1 cut(s) 308
AfiI CCNNNNNNNGG 6 cut(s) 208, 322, 450, 706, 720, 854
AgeI ACCGGT 1 cut(s) 125
AgsI TTSAA 4 cut(s) 132, 171, 548, 875
AjiI CACGTC 1 cut(s) 808
AjnI CCWGG 1 cut(s) 726
AjuI GAANNNNNNNTTGG 1 cut(s) 35
AluBI AGCT 3 cut(s) 14, 551, 824
AluI AGCT 3 cut(s) 14, 551, 824
Alw21I GWGCWC 1 cut(s) 687
Alw26I GTCTC 2 cut(s) 224, 556
AlwI GGATC 4 cut(s) 54, 93, 428, 528
AoxI GGCC 3 cut(s) 480, 660, 845
ApeKI GCWGC 2 cut(s) 139, 585
ApoI RAATTY 1 cut(s) 395
ArsI GACNNNNNNTTYG 4 cut(s) 239, 271, 659, 691
AsiGI ACCGGT 1 cut(s) 125
AspLEI GCGC 1 cut(s) 224
AspS9I GGNCC 1 cut(s) 290
AsuC2I CCSGG 1 cut(s) 209
AvaII GGWCC 1 cut(s) 290
BanI GGYRCC 1 cut(s) 723
Bbv12I GWGCWC 1 cut(s) 687
BbvI GCAGC 2 cut(s) 126, 572
BccI CCATC 3 cut(s) 154, 172, 211
BceAI ACGGC 2 cut(s) 135, 467
BcgI CGANNNNNNTGC 2 cut(s) 584, 618
BciT130I CCWGG 1 cut(s) 728
BcnI CCSGG 1 cut(s) 209
BcoDI GTCTC 2 cut(s) 224, 556
BfaI CTAG 1 cut(s) 827
BisI GCNGC 6 cut(s) 137, 140, 143, 410, 480, 586
BlsI GCNGC 6 cut(s) 138, 141, 144, 411, 481, 587
BmcAI AGTACT 1 cut(s) 308
Bme1390I CCNGG 2 cut(s) 209, 728
Bme18I GGWCC 1 cut(s) 290
BmgBI CACGTC 1 cut(s) 808
BmgT120I GGNCC 1 cut(s) 290
BmiI GGNNCC 7 cut(s) 183, 273, 291, 292, 712, 725, 950
BmrFI CCNGG 2 cut(s) 209, 728
BmrI ACTGGG 1 cut(s) 575
BmsI GCATC 2 cut(s) 466, 893
BmuI ACTGGG 1 cut(s) 575
BplI GAGNNNNNCTC 2 cut(s) 50, 82
BpmI CTGGAG 2 cut(s) 545, 563
BpuMI CCSGG 1 cut(s) 209
Bsa29I ATCGAT 1 cut(s) 39
BsaAI YACGTR 1 cut(s) 964
BsaBI GATNNNNATC 2 cut(s) 45, 907
BsaHI GRCGYC 3 cut(s) 63, 261, 423
BsaI GGTCTC 1 cut(s) 224
BsaJI CCNNGG 2 cut(s) 207, 944
BsaWI WCCGGW 1 cut(s) 125
BsaXI ACNNNNNCTCC 4 cut(s) 179, 209, 964, 994
Bsc4I CCNNNNNNNGG 6 cut(s) 208, 322, 450, 706, 720, 854
Bse118I RCCGGY 1 cut(s) 125
Bse1I ACTGG 2 cut(s) 570, 580
Bse8I GATNNNNATC 2 cut(s) 45, 907
BseBI CCWGG 1 cut(s) 728
BseCI ATCGAT 1 cut(s) 39
BseDI CCNNGG 2 cut(s) 207, 944
BseGI GGATG 5 cut(s) 37, 152, 203, 481, 787
BseJI GATNNNNATC 2 cut(s) 45, 907
BseLI CCNNNNNNNGG 6 cut(s) 208, 322, 450, 706, 720, 854
BseMII CTCAG 1 cut(s) 944
BseNI ACTGG 2 cut(s) 570, 580
BseRI GAGGAG 3 cut(s) 194, 514, 972
BseX3I CGGCCG 1 cut(s) 480
BseXI GCAGC 2 cut(s) 126, 572
Bsh1236I CGCG 2 cut(s) 224, 360
Bsh1285I CGRYCG 4 cut(s) 126, 228, 403, 483
BshFI GGCC 3 cut(s) 482, 662, 847
BshNI GGYRCC 1 cut(s) 723
BshTI ACCGGT 1 cut(s) 125
BshVI ATCGAT 1 cut(s) 39
BsiEI CGRYCG 4 cut(s) 126, 228, 403, 483
BsiHKAI GWGCWC 1 cut(s) 687
BsiSI CCGG 2 cut(s) 126, 209
BslFI GGGAC 1 cut(s) 303
BslI CCNNNNNNNGG 6 cut(s) 208, 322, 450, 706, 720, 854
BsmAI GTCTC 2 cut(s) 224, 556
BsmFI GGGAC 1 cut(s) 303
BsmI GAATGC 1 cut(s) 560
BsnI GGCC 3 cut(s) 482, 662, 847
Bso31I GGTCTC 1 cut(s) 224
Bsp1286I GDGCHC 1 cut(s) 687
Bsp143I GATC 7 cut(s) 46, 85, 225, 433, 488, 520, 881
BspACI CCGC 8 cut(s) 137, 143, 281, 294, 358, 403, 410, 479
BspANI GGCC 3 cut(s) 482, 662, 847
BspCNI CTCAG 1 cut(s) 945
BspDI ATCGAT 1 cut(s) 39
BspFNI CGCG 2 cut(s) 224, 360
BspLI GGNNCC 7 cut(s) 183, 273, 291, 292, 712, 725, 950
BspPI GGATC 4 cut(s) 54, 93, 428, 528
BspT107I GGYRCC 1 cut(s) 723
BspTNI GGTCTC 1 cut(s) 224
BsrBI CCGCTC 2 cut(s) 405, 412
BsrFI RCCGGY 1 cut(s) 125
BsrI ACTGG 2 cut(s) 570, 580
BssAI RCCGGY 1 cut(s) 125
BssECI CCNNGG 2 cut(s) 207, 944
BssMI GATC 7 cut(s) 46, 85, 225, 433, 488, 520, 881
BssNI GRCGYC 3 cut(s) 63, 261, 423
BssT1I CCWWGG 1 cut(s) 944
Bst2UI CCWGG 1 cut(s) 728
Bst4CI ACNGT 2 cut(s) 175, 612
Bst6I CTCTTC 1 cut(s) 163
BstACI GRCGYC 3 cut(s) 63, 261, 423
BstBAI YACGTR 1 cut(s) 964
BstC8I GCNNGC 1 cut(s) 407
BstDEI CTNAG 1 cut(s) 953
BstF5I GGATG 5 cut(s) 37, 152, 203, 481, 787
BstFNI CGCG 2 cut(s) 224, 360
BstHHI GCGC 1 cut(s) 224
BstKTI GATC 7 cut(s) 49, 88, 228, 436, 491, 523, 884
BstMAI GTCTC 2 cut(s) 224, 556
BstMBI GATC 7 cut(s) 46, 85, 225, 433, 488, 520, 881
BstMCI CGRYCG 4 cut(s) 126, 228, 403, 483
BstMWI GCNNNNNNNGC 1 cut(s) 142
BstNI CCWGG 1 cut(s) 728
BstSCI CCNGG 2 cut(s) 207, 726
BstUI CGCG 2 cut(s) 224, 360
BstV1I GCAGC 2 cut(s) 126, 572
BstX2I RGATCY 3 cut(s) 46, 433, 520
BstXI CCANNNNNNTGG 1 cut(s) 82
BstYI RGATCY 3 cut(s) 46, 433, 520
BstZI CGGCCG 1 cut(s) 480
Bsu15I ATCGAT 1 cut(s) 39
BsuRI GGCC 3 cut(s) 482, 662, 847
BsuTUI ATCGAT 1 cut(s) 39
BtrI CACGTC 1 cut(s) 808
BtsCI GGATG 5 cut(s) 37, 152, 203, 481, 787
BtsIMutI CAGTG 3 cut(s) 351, 587, 791
Cac8I GCNNGC 1 cut(s) 407
CfoI GCGC 1 cut(s) 224
Cfr10I RCCGGY 1 cut(s) 125
Cfr13I GGNCC 1 cut(s) 290
ClaI ATCGAT 1 cut(s) 39
CseI GACGC 3 cut(s) 71, 269, 431
Csp6I GTAC 1 cut(s) 307
CspAI ACCGGT 1 cut(s) 125
CviAII CATG 5 cut(s) 89, 602, 644, 650, 736
CviJI RGCY 7 cut(s) 14, 184, 482, 551, 662, 824, 847
CviKI_1 RGCY 7 cut(s) 14, 184, 482, 551, 662, 824, 847
CviQI GTAC 1 cut(s) 307
DdeI CTNAG 1 cut(s) 953
DpnI GATC 7 cut(s) 48, 87, 227, 435, 490, 522, 883
DpnII GATC 7 cut(s) 46, 85, 225, 433, 488, 520, 881
EaeI YGGCCR 1 cut(s) 480
EagI CGGCCG 1 cut(s) 480
Eam1104I CTCTTC 1 cut(s) 163
EarI CTCTTC 1 cut(s) 163
EciI GGCGGA 1 cut(s) 296
EclXI CGGCCG 1 cut(s) 480
Eco130I CCWWGG 1 cut(s) 944
Eco31I GGTCTC 1 cut(s) 224
Eco47I GGWCC 1 cut(s) 290
Eco52I CGGCCG 1 cut(s) 480
EcoO109I RGGNCCY 1 cut(s) 290
EcoRII CCWGG 1 cut(s) 726
EcoT14I CCWWGG 1 cut(s) 944
ErhI CCWWGG 1 cut(s) 944
FaeI CATG 5 cut(s) 92, 605, 647, 653, 739
FaiI YATR 8 cut(s) 90, 332, 513, 603, 637, 645, 651, 737
FaqI GGGAC 1 cut(s) 303
FatI CATG 5 cut(s) 88, 601, 643, 649, 735
FauI CCCGC 1 cut(s) 301
Fnu4HI GCNGC 6 cut(s) 137, 140, 143, 410, 480, 586
FokI GGATG 5 cut(s) 44, 139, 190, 488, 774
Fsp4HI GCNGC 6 cut(s) 137, 140, 143, 410, 480, 586
FspBI CTAG 1 cut(s) 827
GlaI GCGC 1 cut(s) 223
GluI GCNGC 6 cut(s) 137, 140, 143, 410, 480, 586
GsuI CTGGAG 2 cut(s) 545, 563
HaeIII GGCC 3 cut(s) 482, 662, 847
HapII CCGG 2 cut(s) 126, 209
HgaI GACGC 3 cut(s) 71, 269, 431
HhaI GCGC 1 cut(s) 224
Hin1I GRCGYC 3 cut(s) 63, 261, 423
Hin1II CATG 5 cut(s) 92, 605, 647, 653, 739
Hin6I GCGC 1 cut(s) 222
HinP1I GCGC 1 cut(s) 222
HincII GTYRAC 1 cut(s) 340
HindII GTYRAC 1 cut(s) 340
HinfI GANTC 6 cut(s) 284, 362, 380, 571, 598, 674
HpaII CCGG 2 cut(s) 126, 209
Hpy166II GTNNAC 5 cut(s) 340, 805, 811, 961, 967
Hpy188I TCNGA 2 cut(s) 385, 881
Hpy188III TCNNGA 5 cut(s) 29, 229, 288, 524, 952
Hpy8I GTNNAC 5 cut(s) 340, 805, 811, 961, 967
Hpy99I CGWCG 3 cut(s) 254, 263, 431
HpyAV CCTTC 3 cut(s) 357, 450, 511
HpyCH4III ACNGT 2 cut(s) 175, 612
HpyCH4IV ACGT 3 cut(s) 801, 807, 963
HpyCH4V TGCA 3 cut(s) 558, 622, 906
HpyF10VI GCNNNNNNNGC 1 cut(s) 142
HpyF3I CTNAG 1 cut(s) 953
HpySE526I ACGT 3 cut(s) 801, 807, 963
Hsp92I GRCGYC 3 cut(s) 63, 261, 423
Hsp92II CATG 5 cut(s) 92, 605, 647, 653, 739
HspAI GCGC 1 cut(s) 222
KflI GGGWCCC 1 cut(s) 290
Kzo9I GATC 7 cut(s) 46, 85, 225, 433, 488, 520, 881
LmnI GCTCC 2 cut(s) 181, 582
Lsp1109I GCAGC 2 cut(s) 126, 572
LweI GCATC 2 cut(s) 466, 893
MaeI CTAG 1 cut(s) 827
MaeII ACGT 3 cut(s) 801, 807, 963
MaeIII GTNAC 2 cut(s) 115, 777
MalI GATC 7 cut(s) 48, 87, 227, 435, 490, 522, 883
MbiI CCGCTC 2 cut(s) 405, 412
MboI GATC 7 cut(s) 46, 85, 225, 433, 488, 520, 881
MboII GAAGA 3 cut(s) 150, 159, 443
MflI RGATCY 3 cut(s) 46, 433, 520
MhlI GDGCHC 1 cut(s) 687
MluCI AATT 3 cut(s) 5, 317, 395
MlyI GAGTC 1 cut(s) 683
MmeI TCCRAC 3 cut(s) 222, 390, 408
MseI TTAA 3 cut(s) 531, 992, 1000
MslI CAYNNNNRTG 2 cut(s) 239, 648
MspA1I CMGCKG 1 cut(s) 139
MspI CCGG 2 cut(s) 126, 209
MspR9I CCNGG 2 cut(s) 209, 728
Mva1269I GAATGC 1 cut(s) 560
MvaI CCWGG 1 cut(s) 728
MvnI CGCG 2 cut(s) 224, 360
MwoI GCNNNNNNNGC 1 cut(s) 142
NciI CCSGG 1 cut(s) 209
NdeII GATC 7 cut(s) 46, 85, 225, 433, 488, 520, 881
NlaIII CATG 5 cut(s) 92, 605, 647, 653, 739
NlaIV GGNNCC 7 cut(s) 183, 273, 291, 292, 712, 725, 950
NmeAIII GCCGAG 2 cut(s) 198, 619
NmuCI GTSAC 1 cut(s) 115
PcsI WCGNNNNNNNCGW 4 cut(s) 225, 255, 309, 375
PctI GAATGC 1 cut(s) 560
PfeI GAWTC 5 cut(s) 284, 362, 380, 571, 598
PflMI CCANNNNNTGG 1 cut(s) 322
PinAI ACCGGT 1 cut(s) 125
PkrI GCNGC 6 cut(s) 138, 141, 144, 411, 481, 587
Ple19I CGATCG 1 cut(s) 228
PleI GAGTC 1 cut(s) 682
PpsI GAGTC 1 cut(s) 682
Ppu21I YACGTR 1 cut(s) 964
PpuMI RGGWCCY 1 cut(s) 290
Psp5II RGGWCCY 1 cut(s) 290
Psp6I CCWGG 1 cut(s) 726
PspGI CCWGG 1 cut(s) 726
PspN4I GGNNCC 7 cut(s) 183, 273, 291, 292, 712, 725, 950
PspPI GGNCC 1 cut(s) 290
PspPPI RGGWCCY 1 cut(s) 290
PsuI RGATCY 3 cut(s) 46, 433, 520
PvuI CGATCG 1 cut(s) 228
RsaI GTAC 1 cut(s) 308
RsaNI GTAC 1 cut(s) 307
RseI CAYNNNNRTG 2 cut(s) 239, 648
SaqAI TTAA 3 cut(s) 531, 992, 1000
SatI GCNGC 6 cut(s) 137, 140, 143, 410, 480, 586
Sau3AI GATC 7 cut(s) 46, 85, 225, 433, 488, 520, 881
Sau96I GGNCC 1 cut(s) 290
ScaI AGTACT 1 cut(s) 308
SchI GAGTC 1 cut(s) 683
ScrFI CCNGG 2 cut(s) 209, 728
SduI GDGCHC 1 cut(s) 687
SetI ASST 7 cut(s) 16, 273, 553, 804, 810, 826, 966
SfaNI GCATC 2 cut(s) 466, 893
SinI GGWCC 1 cut(s) 290
SmiMI CAYNNNNRTG 2 cut(s) 239, 648
Sse9I AATT 3 cut(s) 5, 317, 395
SsiI CCGC 8 cut(s) 137, 143, 281, 294, 358, 403, 410, 479
SspMI CTAG 1 cut(s) 827
StyD4I CCNGG 2 cut(s) 207, 726
StyI CCWWGG 1 cut(s) 944
TaaI ACNGT 2 cut(s) 175, 612
TaiI ACGT 3 cut(s) 804, 810, 966
TaqI TCGA 7 cut(s) 39, 228, 258, 399, 640, 757, 860
TasI AATT 3 cut(s) 5, 317, 395
TatI WGTACW 1 cut(s) 306
TauI GCSGC 4 cut(s) 139, 145, 412, 482
TfiI GAWTC 5 cut(s) 284, 362, 380, 571, 598
Tru1I TTAA 3 cut(s) 531, 992, 1000
Tru9I TTAA 3 cut(s) 531, 992, 1000
TscAI CASTG 3 cut(s) 358, 587, 798
TseFI GTSAC 1 cut(s) 115
TseI GCWGC 2 cut(s) 139, 585
Tsp45I GTSAC 1 cut(s) 115
TspDTI ATGAA 4 cut(s) 48, 257, 641, 941
TspGWI ACGGA 1 cut(s) 828
TspRI CASTG 3 cut(s) 358, 587, 798
Van91I CCANNNNNTGG 1 cut(s) 322
VpaK11BI GGWCC 1 cut(s) 290
XapI RAATTY 1 cut(s) 395
XspI CTAG 1 cut(s) 827
ZrmI AGTACT 1 cut(s) 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.