Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0007279

Physical Location & Seq

Genomic Coordinates Reverse (-)

33003748 .. 33005515

Gene Structure 1768 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G026080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 966 bp

ATGGAATTCGACGGAGGCCTTGAATTTTTGGACAGCGGCGTTGACGTGATCGGAGAGATCGATTGGGATTTCGTATTCGATGACGCGAAAGGGTTAGATTTGTTGCAGGAGTTGGAGAACCCGGCCGCCACGGCGGCGACTGGGGCTTCGCCTTCTTCGTCGTCGTCGTCATCGACGGTGGAGGATGCTCCGGCCAACCCGGAGACCGGATCGATTGACACGTGGATCGGCGAGGTTGAGGACATGCTGATGAAAGACGACGACGTCAGCAAGGTGGAGGCTTCGGAGGAGCCGCCTAAGGAGTACTATGAGAATTTTTTGGCGGATGTACTCGTGGACTCGCCGTCGACGGAATCTCCAGCCGACGTGGATTCGAATTCAAACGGCTGCGCTGAGTCGGAGAAGGAGAAAACCGATGGATCGCCGCTCAACAATGATACGGATGCTGACGCAGACGCTGACGATCCTGTCTCCAAGAAAAGGAGAAGGCAGCTGAGAAATAAGGATGCAGCGATGAGATCAAGGGAGAGGAGAAAAATGTATGTCACAGATCTGGAGATGAAGAGCAAGTATTTGGAAGGCGAATGCAGGAGGCTGGGGCGTTTGCTTCAGTGCTGCTATGCCGAGAACCATGCTTTGCGACTTAGTCTACAGATGGGCAATGCATATGGCCGTGGTGTTTCTGGTACCAAGCAGGAGTCTGCTGTGCTCTTGGAACTCCTGCTGTTGGGTTCCCTGCTTTGGTTCCTGGACCTCACGTGCCTATTCACCCTGCCTCTAATGCCCCACCTACTACTACTAACTCTAAATCAAGAGCAGGCAAACAAAGCTCTAGAAATTGTGGGTCCAAGAGCAAGAGGGGAAGCAAGTAAGGTGGTTTTGGCGCTTCAGTCTCAATCTTTTGTAAAGACTAGGAGGTGCAAGGCGTCCAGGACGAAGATGAAATATGCTTTCCTTGTCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0006355 GO:0006950 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0009889 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0023052 GO:0030968 GO:0031323 GO:0031326 GO:0031984 GO:0033554 GO:0034620 GO:0034976 GO:0035966 GO:0035967 GO:0042175 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0080090 GO:0098827 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1 bZIP_2

Protein Analysis

321

Amino Acids

35.37

Weight (kDa)

4.63

Isoelectric Point (pI)

59.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_2	PF07716	158 - 199	9.2e-07	Basic region leucine zipper
bZIP_1	PF00170	159 - 199	6.6e-08	bZIP transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007279)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G42990
fragaria_vesca	FvH4_5g26440
malus_domestica	MD06G1002100.v1.1
prunus_persica	Prupe.5G003000_v2.0.a1
pyrus_communis	pycom06g00220
rosa_chinensis	RchiOBHm_Chr7g0217321
rosa_laevigata	RLG00000002495 RLG00000003279 RLG00000008982 RLG00000010053
rosa_multiflora	Rmu_co8478867.1_g000001 Rmu_sc0002399.1_g000009 Rmu_sc0002842.1_g000001 Rmu_sc0007784.1_g000005 Rmu_sc0007843.1_g000003
rosa_roxburghii	Rroxscaffold_3G00242450
rosa_rugosa	Rorug02G0159300 Rorug07G0168000
rosa_samantha	Rh7AG307200 Rh7BG298100 Rh7CG185700 Rh7CG326200 Rh7DG306800
rosa_wichuraiana	Rw7G026080 Rw7G029750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	263, 467
AatII	GACGTC	1 cut(s)	267
Acc65I	GGTACC	1 cut(s)	686
AccB1I	GGYRCC	1 cut(s)	686
AccBSI	CCGCTC	1 cut(s)	427
AccI	GTMKAC	2 cut(s)	347, 649
AccII	CGCG	1 cut(s)	86
AciI	CCGC	6 cut(s)	36, 126, 134, 293, 323, 425
AclWI	GGATC	4 cut(s)	217, 233, 427, 458
AcoI	YGGCCR	3 cut(s)	123, 192, 670
AcsI	RAATTY	4 cut(s)	5, 23, 313, 376
AcuI	CTGAAG	2 cut(s)	593, 872
AcvI	CACGTG	2 cut(s)	222, 759
AcyI	GRCGYC	2 cut(s)	264, 926
AfaI	GTAC	3 cut(s)	305, 330, 688
AfiI	CCNNNNNNNGG	4 cut(s)	206, 480, 727, 741
AflIII	ACRYGT	1 cut(s)	219
AgsI	TTSAA	2 cut(s)	23, 381
AhdI	GACNNNNNGTC	1 cut(s)	343
AjiI	CACGTC	2 cut(s)	46, 367
AjnI	CCWGG	2 cut(s)	747, 929
AluBI	AGCT	2 cut(s)	493, 830
AluI	AGCT	2 cut(s)	493, 830
Alw21I	GWGCWC	1 cut(s)	711
Alw26I	GTCTC	3 cut(s)	197, 475, 897
AlwI	GGATC	4 cut(s)	217, 233, 427, 458
AlwNI	CAGNNNCTG	1 cut(s)	458
AoxI	GGCC	4 cut(s)	16, 123, 192, 670
ApeKI	GCWGC	4 cut(s)	387, 490, 509, 615
ApoI	RAATTY	4 cut(s)	5, 23, 313, 376
ArsI	GACNNNNNNTTYG	2 cut(s)	130, 162
Asp718I	GGTACC	1 cut(s)	686
AspLEI	GCGC	2 cut(s)	392, 886
AspS9I	GGNCC	2 cut(s)	751, 845
AsuC2I	CCSGG	2 cut(s)	122, 200
AsuHPI	GGTGA	1 cut(s)	760
AsuII	TTCGAA	1 cut(s)	374
AvaII	GGWCC	2 cut(s)	751, 845
AxyI	CCTNAGG	1 cut(s)	297
BanI	GGYRCC	1 cut(s)	686
BauI	CACGAG	1 cut(s)	332
BbrPI	CACGTG	2 cut(s)	222, 759
Bbv12I	GWGCWC	1 cut(s)	711
BbvI	GCAGC	4 cut(s)	374, 502, 521, 602
BccI	CCATC	2 cut(s)	410, 649
BceAI	ACGGC	4 cut(s)	147, 328, 400, 657
BcgI	CGANNNNNNTGC	2 cut(s)	614, 648
BciT130I	CCWGG	2 cut(s)	749, 931
BcnI	CCSGG	2 cut(s)	122, 200
BcoDI	GTCTC	3 cut(s)	197, 475, 897
BfaI	CTAG	2 cut(s)	833, 912
BfmI	CTRYAG	1 cut(s)	650
BfoI	RGCGCY	1 cut(s)	887
BglI	GCCNNNNNGGC	2 cut(s)	131, 134
BglII	AGATCT	1 cut(s)	550
BisI	GCNGC	9 cut(s)	37, 126, 135, 293, 388, 425, 491, 510, 616
BlsI	GCNGC	9 cut(s)	38, 127, 136, 294, 389, 426, 492, 511, 617
BmcAI	AGTACT	1 cut(s)	305
Bme1390I	CCNGG	4 cut(s)	122, 200, 749, 931
Bme18I	GGWCC	2 cut(s)	751, 845
BmeRI	GACNNNNNGTC	1 cut(s)	343
BmgBI	CACGTC	2 cut(s)	46, 367
BmgT120I	GGNCC	2 cut(s)	751, 845
BmiI	GGNNCC	5 cut(s)	291, 688, 733, 746, 846
BmrFI	CCNGG	4 cut(s)	122, 200, 749, 931
BmrI	ACTGGG	1 cut(s)	150
BmsI	GCATC	3 cut(s)	175, 433, 496
BmuI	ACTGGG	1 cut(s)	150
BpmI	CTGGAG	2 cut(s)	342, 575
Bpu14I	TTCGAA	1 cut(s)	374
BpuMI	CCSGG	2 cut(s)	122, 200
Bsa29I	ATCGAT	2 cut(s)	60, 212
BsaAI	YACGTR	2 cut(s)	222, 759
BsaHI	GRCGYC	2 cut(s)	264, 926
BsaI	GGTCTC	1 cut(s)	197
BsaJI	CCNNGG	2 cut(s)	129, 673
BsaWI	WCCGGW	1 cut(s)	206
BsaXI	ACNNNNNCTCC	2 cut(s)	340, 370
Bsc4I	CCNNNNNNNGG	4 cut(s)	206, 480, 727, 741
Bse1I	ACTGG	1 cut(s)	145
Bse21I	CCTNAGG	1 cut(s)	297
Bse3DI	GCAATG	1 cut(s)	667
BseBI	CCWGG	2 cut(s)	749, 931
BseCI	ATCGAT	2 cut(s)	60, 212
BseDI	CCNNGG	2 cut(s)	129, 673
BseGI	GGATG	4 cut(s)	190, 331, 448, 511
BseLI	CCNNNNNNNGG	4 cut(s)	206, 480, 727, 741
BseMI	GCAATG	1 cut(s)	667
BseMII	CTCAG	2 cut(s)	384, 485
BseNI	ACTGG	1 cut(s)	145
BseRI	GAGGAG	2 cut(s)	302, 544
BseX3I	CGGCCG	1 cut(s)	123
BseXI	GCAGC	4 cut(s)	374, 502, 521, 602
BseYI	CCCAGC	1 cut(s)	595
Bsh1236I	CGCG	1 cut(s)	86
Bsh1285I	CGRYCG	1 cut(s)	126
BshFI	GGCC	4 cut(s)	18, 125, 194, 672
BshNI	GGYRCC	1 cut(s)	686
BshVI	ATCGAT	2 cut(s)	60, 212
BsiEI	CGRYCG	1 cut(s)	126
BsiHKAI	GWGCWC	1 cut(s)	711
BsiSI	CCGG	4 cut(s)	122, 191, 200, 207
BslI	CCNNNNNNNGG	4 cut(s)	206, 480, 727, 741
BsmAI	GTCTC	3 cut(s)	197, 475, 897
BsmI	GAATGC	1 cut(s)	590
BsnI	GGCC	4 cut(s)	18, 125, 194, 672
Bso31I	GGTCTC	1 cut(s)	197
Bsp119I	TTCGAA	1 cut(s)	374
Bsp1286I	GDGCHC	1 cut(s)	711
Bsp143I	GATC	8 cut(s)	48, 57, 209, 225, 419, 463, 518, 550
BspACI	CCGC	6 cut(s)	36, 126, 134, 293, 323, 425
BspANI	GGCC	4 cut(s)	18, 125, 194, 672
BspCNI	CTCAG	2 cut(s)	385, 486
BspDI	ATCGAT	2 cut(s)	60, 212
BspFNI	CGCG	1 cut(s)	86
BspLI	GGNNCC	5 cut(s)	291, 688, 733, 746, 846
BspPI	GGATC	4 cut(s)	217, 233, 427, 458
BspQI	GCTCTTC	1 cut(s)	557
BspT104I	TTCGAA	1 cut(s)	374
BspT107I	GGYRCC	1 cut(s)	686
BspTNI	GGTCTC	1 cut(s)	197
BsrBI	CCGCTC	1 cut(s)	427
BsrDI	GCAATG	1 cut(s)	667
BsrI	ACTGG	1 cut(s)	145
BssECI	CCNNGG	2 cut(s)	129, 673
BssMI	GATC	8 cut(s)	48, 57, 209, 225, 419, 463, 518, 550
BssNI	GRCGYC	2 cut(s)	264, 926
BssSI	CACGAG	1 cut(s)	332
Bst2BI	CACGAG	1 cut(s)	332
Bst2UI	CCWGG	2 cut(s)	749, 931
Bst4CI	ACNGT	1 cut(s)	178
Bst6I	CTCTTC	1 cut(s)	557
BstACI	GRCGYC	2 cut(s)	264, 926
BstBAI	YACGTR	2 cut(s)	222, 759
BstBI	TTCGAA	1 cut(s)	374
BstC8I	GCNNGC	1 cut(s)	819
BstDEI	CTNAG	4 cut(s)	297, 393, 494, 644
BstDSI	CCRYGG	2 cut(s)	129, 673
BstF5I	GGATG	4 cut(s)	190, 331, 448, 511
BstFNI	CGCG	1 cut(s)	86
BstH2I	RGCGCY	1 cut(s)	887
BstHHI	GCGC	2 cut(s)	392, 886
BstKTI	GATC	8 cut(s)	51, 60, 212, 228, 422, 466, 521, 553
BstMAI	GTCTC	3 cut(s)	197, 475, 897
BstMBI	GATC	8 cut(s)	48, 57, 209, 225, 419, 463, 518, 550
BstMCI	CGRYCG	1 cut(s)	126
BstMWI	GCNNNNNNNGC	5 cut(s)	131, 134, 143, 781, 827
BstNI	CCWGG	2 cut(s)	749, 931
BstNSI	RCATGY	1 cut(s)	247
BstSCI	CCNGG	4 cut(s)	120, 198, 747, 929
BstSFI	CTRYAG	1 cut(s)	650
BstUI	CGCG	1 cut(s)	86
BstV1I	GCAGC	4 cut(s)	374, 502, 521, 602
BstX2I	RGATCY	1 cut(s)	550
BstYI	RGATCY	1 cut(s)	550
BstZI	CGGCCG	1 cut(s)	123
Bsu15I	ATCGAT	2 cut(s)	60, 212
Bsu36I	CCTNAGG	1 cut(s)	297
BsuRI	GGCC	4 cut(s)	18, 125, 194, 672
BsuTUI	ATCGAT	2 cut(s)	60, 212
BtgI	CCRYGG	2 cut(s)	129, 673
BtgZI	GCGATG	1 cut(s)	527
BtrI	CACGTC	2 cut(s)	46, 367
BtsCI	GGATG	4 cut(s)	190, 331, 448, 511
BtsIMutI	CAGTG	1 cut(s)	617
Cac8I	GCNNGC	1 cut(s)	819
CaiI	CAGNNNCTG	1 cut(s)	458
CfoI	GCGC	2 cut(s)	392, 886
Cfr13I	GGNCC	2 cut(s)	751, 845
ClaI	ATCGAT	2 cut(s)	60, 212
CseI	GACGC	4 cut(s)	92, 458, 464, 915
Csp6I	GTAC	3 cut(s)	304, 329, 687
CspCI	CAANNNNNGTGG	2 cut(s)	855, 890
CviAII	CATG	2 cut(s)	244, 632
CviQI	GTAC	3 cut(s)	304, 329, 687
DdeI	CTNAG	4 cut(s)	297, 393, 494, 644
DpnI	GATC	8 cut(s)	50, 59, 211, 227, 421, 465, 520, 552
DpnII	GATC	8 cut(s)	48, 57, 209, 225, 419, 463, 518, 550
DrdI	GACNNNNNNGTC	2 cut(s)	263, 467
DriI	GACNNNNNGTC	1 cut(s)	343
DseDI	GACNNNNNNGTC	2 cut(s)	263, 467
EaeI	YGGCCR	3 cut(s)	123, 192, 670
EagI	CGGCCG	1 cut(s)	123
Eam1104I	CTCTTC	1 cut(s)	557
Eam1105I	GACNNNNNGTC	1 cut(s)	343
EarI	CTCTTC	1 cut(s)	557
EciI	GGCGGA	1 cut(s)	338
EclXI	CGGCCG	1 cut(s)	123
Eco147I	AGGCCT	1 cut(s)	18
Eco31I	GGTCTC	1 cut(s)	197
Eco47I	GGWCC	2 cut(s)	751, 845
Eco52I	CGGCCG	1 cut(s)	123
Eco57I	CTGAAG	2 cut(s)	593, 872
Eco72I	CACGTG	2 cut(s)	222, 759
Eco81I	CCTNAGG	1 cut(s)	297
EcoRI	GAATTC	2 cut(s)	5, 376
EcoRII	CCWGG	2 cut(s)	747, 929
EcoT22I	ATGCAT	1 cut(s)	667
FaeI	CATG	2 cut(s)	247, 635
FaiI	YATR	8 cut(s)	245, 309, 543, 621, 633, 667, 669, 948
FatI	CATG	2 cut(s)	243, 631
FauNDI	CATATG	1 cut(s)	667
FblI	GTMKAC	2 cut(s)	347, 649
Fnu4HI	GCNGC	9 cut(s)	37, 126, 135, 293, 388, 425, 491, 510, 616
FokI	GGATG	4 cut(s)	197, 338, 455, 518
Fsp4HI	GCNGC	9 cut(s)	37, 126, 135, 293, 388, 425, 491, 510, 616
FspBI	CTAG	2 cut(s)	833, 912
GlaI	GCGC	2 cut(s)	391, 885
GluI	GCNGC	9 cut(s)	37, 126, 135, 293, 388, 425, 491, 510, 616
GsaI	CCCAGC	1 cut(s)	599
GsuI	CTGGAG	2 cut(s)	342, 575
HaeII	RGCGCY	1 cut(s)	887
HaeIII	GGCC	4 cut(s)	18, 125, 194, 672
HapII	CCGG	4 cut(s)	122, 191, 200, 207
HgaI	GACGC	4 cut(s)	92, 458, 464, 915
HhaI	GCGC	2 cut(s)	392, 886
Hin1I	GRCGYC	2 cut(s)	264, 926
Hin1II	CATG	2 cut(s)	247, 635
Hin6I	GCGC	2 cut(s)	390, 884
HinP1I	GCGC	2 cut(s)	390, 884
HincII	GTYRAC	2 cut(s)	43, 348
HindII	GTYRAC	2 cut(s)	43, 348
HinfI	GANTC	5 cut(s)	338, 353, 371, 395, 698
HpaII	CCGG	4 cut(s)	122, 191, 200, 207
HphI	GGTGA	1 cut(s)	760
Hpy166II	GTNNAC	4 cut(s)	43, 337, 348, 650
Hpy188I	TCNGA	3 cut(s)	53, 286, 400
Hpy188III	TCNNGA	4 cut(s)	554, 812, 833, 963
Hpy8I	GTNNAC	4 cut(s)	43, 337, 348, 650
HpyAV	CCTTC	4 cut(s)	162, 397, 480, 572
HpyCH4III	ACNGT	1 cut(s)	178
HpyCH4IV	ACGT	5 cut(s)	45, 221, 264, 366, 758
HpyCH4V	TGCA	5 cut(s)	106, 509, 588, 665, 921
HpyF10VI	GCNNNNNNNGC	5 cut(s)	131, 134, 143, 781, 827
HpyF3I	CTNAG	4 cut(s)	297, 393, 494, 644
HpySE526I	ACGT	5 cut(s)	45, 221, 264, 366, 758
Hsp92I	GRCGYC	2 cut(s)	264, 926
Hsp92II	CATG	2 cut(s)	247, 635
HspAI	GCGC	2 cut(s)	390, 884
KpnI	GGTACC	1 cut(s)	690
Kzo9I	GATC	8 cut(s)	48, 57, 209, 225, 419, 463, 518, 550
LguI	GCTCTTC	1 cut(s)	557
LmnI	GCTCC	2 cut(s)	193, 289
Lsp1109I	GCAGC	4 cut(s)	374, 502, 521, 602
LweI	GCATC	3 cut(s)	175, 433, 496
MaeI	CTAG	2 cut(s)	833, 912
MaeII	ACGT	5 cut(s)	45, 221, 264, 366, 758
MaeIII	GTNAC	1 cut(s)	544
MalI	GATC	8 cut(s)	50, 59, 211, 227, 421, 465, 520, 552
MbiI	CCGCTC	1 cut(s)	427
MboI	GATC	8 cut(s)	48, 57, 209, 225, 419, 463, 518, 550
MboII	GAAGA	3 cut(s)	147, 574, 949
MflI	RGATCY	1 cut(s)	550
MhlI	GDGCHC	1 cut(s)	711
MluCI	AATT	5 cut(s)	5, 23, 313, 376, 837
MlyI	GAGTC	3 cut(s)	332, 404, 707
MmeI	TCCRAC	2 cut(s)	93, 378
Mph1103I	ATGCAT	1 cut(s)	667
MslI	CAYNNNNRTG	1 cut(s)	248
MspA1I	CMGCKG	2 cut(s)	36, 493
MspI	CCGG	4 cut(s)	122, 191, 200, 207
MspR9I	CCNGG	4 cut(s)	122, 200, 749, 931
Mva1269I	GAATGC	1 cut(s)	590
MvaI	CCWGG	2 cut(s)	749, 931
MvnI	CGCG	1 cut(s)	86
MwoI	GCNNNNNNNGC	5 cut(s)	131, 134, 143, 781, 827
NciI	CCSGG	2 cut(s)	122, 200
NdeI	CATATG	1 cut(s)	667
NdeII	GATC	8 cut(s)	48, 57, 209, 225, 419, 463, 518, 550
NlaIII	CATG	2 cut(s)	247, 635
NlaIV	GGNNCC	5 cut(s)	291, 688, 733, 746, 846
NmeAIII	GCCGAG	1 cut(s)	649
NmuCI	GTSAC	1 cut(s)	544
NsiI	ATGCAT	1 cut(s)	667
NspI	RCATGY	1 cut(s)	247
NspV	TTCGAA	1 cut(s)	374
PceI	AGGCCT	1 cut(s)	18
PciSI	GCTCTTC	1 cut(s)	557
PcsI	WCGNNNNNNNCGW	5 cut(s)	57, 155, 164, 170, 218
PctI	GAATGC	1 cut(s)	590
PfeI	GAWTC	2 cut(s)	353, 371
PflFI	GACNNNGTC	2 cut(s)	263, 645
PfoI	TCCNGGA	2 cut(s)	747, 929
PkrI	GCNGC	9 cut(s)	38, 127, 136, 294, 389, 426, 492, 511, 617
PleI	GAGTC	3 cut(s)	332, 403, 706
PmaCI	CACGTG	2 cut(s)	222, 759
PmlI	CACGTG	2 cut(s)	222, 759
PpsI	GAGTC	3 cut(s)	332, 403, 706
Ppu21I	YACGTR	2 cut(s)	222, 759
Psp6I	CCWGG	2 cut(s)	747, 929
PspCI	CACGTG	2 cut(s)	222, 759
PspFI	CCCAGC	1 cut(s)	595
PspGI	CCWGG	2 cut(s)	747, 929
PspN4I	GGNNCC	5 cut(s)	291, 688, 733, 746, 846
PspPI	GGNCC	2 cut(s)	751, 845
PstNI	CAGNNNCTG	1 cut(s)	458
PsuI	RGATCY	1 cut(s)	550
PsyI	GACNNNGTC	2 cut(s)	263, 645
PvuII	CAGCTG	1 cut(s)	493
RsaI	GTAC	3 cut(s)	305, 330, 688
RsaNI	GTAC	3 cut(s)	304, 329, 687
RseI	CAYNNNNRTG	1 cut(s)	248
SalI	GTCGAC	1 cut(s)	346
SapI	GCTCTTC	1 cut(s)	557
SatI	GCNGC	9 cut(s)	37, 126, 135, 293, 388, 425, 491, 510, 616
Sau3AI	GATC	8 cut(s)	48, 57, 209, 225, 419, 463, 518, 550
Sau96I	GGNCC	2 cut(s)	751, 845
ScaI	AGTACT	1 cut(s)	305
SchI	GAGTC	3 cut(s)	332, 404, 707
ScrFI	CCNGG	4 cut(s)	122, 200, 749, 931
SduI	GDGCHC	1 cut(s)	711
SfaNI	GCATC	3 cut(s)	175, 433, 496
SfcI	CTRYAG	1 cut(s)	650
SfuI	TTCGAA	1 cut(s)	374
SgrDI	CGTCGACG	1 cut(s)	346
SinI	GGWCC	2 cut(s)	751, 845
SmiMI	CAYNNNNRTG	1 cut(s)	248
Sse9I	AATT	5 cut(s)	5, 23, 313, 376, 837
SseBI	AGGCCT	1 cut(s)	18
SsiI	CCGC	6 cut(s)	36, 126, 134, 293, 323, 425
SspMI	CTAG	2 cut(s)	833, 912
StuI	AGGCCT	1 cut(s)	18
StyD4I	CCNGG	4 cut(s)	120, 198, 747, 929
TaaI	ACNGT	1 cut(s)	178
TaiI	ACGT	5 cut(s)	48, 224, 267, 369, 761
TaqI	TCGA	7 cut(s)	9, 60, 78, 173, 212, 347, 374
TasI	AATT	5 cut(s)	5, 23, 313, 376, 837
TatI	WGTACW	2 cut(s)	303, 328
TauI	GCSGC	5 cut(s)	39, 128, 137, 295, 427
TfiI	GAWTC	2 cut(s)	353, 371
TscAI	CASTG	1 cut(s)	617
TseFI	GTSAC	1 cut(s)	544
TseI	GCWGC	4 cut(s)	387, 490, 509, 615
Tsp45I	GTSAC	1 cut(s)	544
TspDTI	ATGAA	3 cut(s)	266, 575, 956
TspGWI	ACGGA	3 cut(s)	27, 365, 455
TspRI	CASTG	1 cut(s)	617
Tth111I	GACNNNGTC	2 cut(s)	263, 645
VpaK11BI	GGWCC	2 cut(s)	751, 845
XapI	RAATTY	4 cut(s)	5, 23, 313, 376
XbaI	TCTAGA	1 cut(s)	832
XceI	RCATGY	1 cut(s)	247
XmiI	GTMKAC	2 cut(s)	347, 649
XspI	CTAG	2 cut(s)	833, 912
ZraI	GACGTC	1 cut(s)	265
ZrmI	AGTACT	1 cut(s)	305
Zsp2I	ATGCAT	1 cut(s)	667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.