MD06G1169900.v1.1

FKBP12-interacting protein of 37

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0006769
Physical Location & Seq
Reverse (-)
31045048 .. 31058012
12965 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1169900.v1.1.491

Sequence Viewer

Length: 1008 bp
ATGGCTACCCATGACGATGATGACTTCGGTGGCGATTCTCCCAGTCCCAGGCGTGGTAAAAAGAGAAGCTTTGGCGATGACGACTTAGAATTTGATCCTTTCGGCTCGAAACAGGGTAACTCGAAAGTTGAAGAAACTGCTCCTGGTGGTGCAACAGCGATGATTTTGACTCTTCGTGAGAGTCTTCAAAACTGTAAGGATACTCTTGCAACATGCCAAACAGAACTTGAAGCTGCAAAATCTGAGATTCAAAAGTGGCATTCTTCATTTCAGAATGAACCCTGCTTAGCTTCTGGAACTTCTCCTGATCCTAAACTGGTCATCAATTATCTTCAGTCCCTGAAAAACTCCGAGGAGTCATTGAAAGAACAGTTAGAGAAAGCAAAGAAAAAGGAAGCTGCGTTTATTGTCACATTTGCGAAACGGGAGCAGGAGATAGCAGAGCTCAAGTCTGCAGTCCGGGAGCTTAAAGCTCAACTCAAGCCACCATCAATGCAGGCAAGAAGATTGCTACTCGATCCAGCAATTCATGAGGAGTTTACTCGTCTAAAGACTTTGGTTGAGGAGAAGGAAAAAAAGGTGAAGGAGTTGAAGGAAGATATCGAAGCTCTTTCATTTACTGCGGCAAGCAAGATGGGGAAGCAGTTAATGGCTAAATGTCGGACGCTCCAAGAGGAAAATGAGGAGATTGGCAATGAAGCTTCTGAGGGAAAGATGCATGAATTATCTATGAAACTTGCGTTGCAAAAATCCCAAAATGCAGAACTCAGAAGTCAATTTGAAGGGTTGCACAAACATATGGAGGGGCTCACAAATGATGTTGAAAGATCAAATGAAATGGTGCGTATCACGCAAGAGCAGCTAGAGGAGAAAGACCGTGAAATCAAACGGTTAAAGCAGGAGCTGGAGCAGAAGAGCTTGATAGGGAAGGAGAAGGCAGATCCAGCTTCTGACGCTAAGAAAGCTAGCGACGATGATGAGATGGTACCTGGAGAAGTCGACAGCTGA

Protein Analysis

336

Amino Acids

37.68

Weight (kDa)

5.23

Isoelectric Point (pI)

58.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Wtap PF17098 127 - 281 3.4e-52 WTAP/Mum2p family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 985
AccB1I GGYRCC 1 cut(s) 985
AccI GTMKAC 1 cut(s) 999
AciI CCGC 1 cut(s) 623
AclWI GGATC 4 cut(s) 89, 302, 512, 935
AcsI RAATTY 1 cut(s) 89
AcuI CTGAAG 1 cut(s) 317
AfaI GTAC 1 cut(s) 987
AfiI CCNNNNNNNGG 2 cut(s) 48, 53
AgsI TTSAA 8 cut(s) 131, 188, 230, 251, 364, 592, 782, 824
AjnI CCWGG 3 cut(s) 47, 142, 988
Alw21I GWGCWC 1 cut(s) 447
AlwI GGATC 4 cut(s) 89, 302, 512, 935
AlwNI CAGNNNCTG 3 cut(s) 340, 904, 950
ApeKI GCWGC 3 cut(s) 233, 398, 859
ApoI RAATTY 1 cut(s) 89
ArsI GACNNNNNNTTYG 2 cut(s) 74, 106
Asp718I GGTACC 1 cut(s) 985
AsuC2I CCSGG 1 cut(s) 461
AsuHPI GGTGA 1 cut(s) 592
AsuNHI GCTAGC 1 cut(s) 965
BanI GGYRCC 1 cut(s) 985
BanII GRGCYC 2 cut(s) 447, 810
BbsI GAAGAC 1 cut(s) 176
Bbv12I GWGCWC 1 cut(s) 447
BbvI GCAGC 3 cut(s) 220, 385, 871
BccI CCATC 3 cut(s) 496, 628, 976
BciT130I CCWGG 3 cut(s) 49, 144, 990
BciVI GTATCC 1 cut(s) 193
BcnI CCSGG 1 cut(s) 461
BfaI CTAG 2 cut(s) 863, 966
BfmI CTRYAG 1 cut(s) 453
BfuI GTATCC 1 cut(s) 193
BisI GCNGC 4 cut(s) 234, 399, 624, 860
BlpI GCTNAGC 1 cut(s) 286
BlsI GCNGC 4 cut(s) 235, 400, 625, 861
Bme1390I CCNGG 4 cut(s) 49, 144, 461, 990
BmiI GGNNCC 1 cut(s) 987
BmrFI CCNGG 4 cut(s) 49, 144, 461, 990
BmrI ACTGGG 1 cut(s) 36
BmsI GCATC 1 cut(s) 705
BmtI GCTAGC 1 cut(s) 969
BmuI ACTGGG 1 cut(s) 36
BpiI GAAGAC 1 cut(s) 176
BpmI CTGGAG 1 cut(s) 926
Bpu1102I GCTNAGC 1 cut(s) 286
BpuEI CTTGAG 2 cut(s) 431, 464
BpuMI CCSGG 1 cut(s) 461
BsaJI CCNNGG 2 cut(s) 47, 351
Bsc4I CCNNNNNNNGG 2 cut(s) 48, 53
Bse1I ACTGG 2 cut(s) 42, 321
Bse3DI GCAATG 1 cut(s) 700
BseBI CCWGG 3 cut(s) 49, 144, 990
BseDI CCNNGG 2 cut(s) 47, 351
BseLI CCNNNNNNNGG 2 cut(s) 48, 53
BseMI GCAATG 1 cut(s) 700
BseMII CTCAG 3 cut(s) 234, 696, 781
BseNI ACTGG 2 cut(s) 42, 321
BseRI GAGGAG 5 cut(s) 368, 548, 578, 698, 881
BseXI GCAGC 3 cut(s) 220, 385, 871
BshNI GGYRCC 1 cut(s) 985
BsiHKAI GWGCWC 1 cut(s) 447
BsiSI CCGG 1 cut(s) 460
BslFI GGGAC 2 cut(s) 30, 322
BslI CCNNNNNNNGG 2 cut(s) 48, 53
BsmFI GGGAC 2 cut(s) 30, 322
BsmI GAATGC 1 cut(s) 259
Bsp1286I GDGCHC 2 cut(s) 447, 810
Bsp143I GATC 5 cut(s) 94, 307, 517, 827, 940
Bsp1720I GCTNAGC 1 cut(s) 286
BspACI CCGC 1 cut(s) 623
BspCNI CTCAG 3 cut(s) 235, 697, 780
BspHI TCATGA 1 cut(s) 529
BspLI GGNNCC 1 cut(s) 987
BspMAI CTGCAG 1 cut(s) 457
BspOI GCTAGC 1 cut(s) 969
BspPI GGATC 4 cut(s) 89, 302, 512, 935
BspQI GCTCTTC 1 cut(s) 908
BspT107I GGYRCC 1 cut(s) 985
BsrDI GCAATG 1 cut(s) 700
BsrI ACTGG 2 cut(s) 42, 321
BssECI CCNNGG 2 cut(s) 47, 351
BssMI GATC 5 cut(s) 94, 307, 517, 827, 940
Bst2UI CCWGG 3 cut(s) 49, 144, 990
Bst4CI ACNGT 4 cut(s) 194, 372, 878, 891
Bst6I CTCTTC 2 cut(s) 177, 908
BstC8I GCNNGC 3 cut(s) 498, 628, 967
BstDEI CTNAG 6 cut(s) 85, 243, 286, 705, 767, 957
BstKTI GATC 5 cut(s) 97, 310, 520, 830, 943
BstMBI GATC 5 cut(s) 94, 307, 517, 827, 940
BstMWI GCNNNNNNNGC 5 cut(s) 850, 859, 944, 953, 962
BstNI CCWGG 3 cut(s) 49, 144, 990
BstNSI RCATGY 1 cut(s) 216
BstSCI CCNGG 4 cut(s) 47, 142, 459, 988
BstSFI CTRYAG 1 cut(s) 453
BstV1I GCAGC 3 cut(s) 220, 385, 871
BstV2I GAAGAC 1 cut(s) 176
BstX2I RGATCY 1 cut(s) 940
BstYI RGATCY 1 cut(s) 940
BsuI GTATCC 1 cut(s) 193
BtgZI GCGATG 2 cut(s) 90, 173
Cac8I GCNNGC 3 cut(s) 498, 628, 967
CaiI CAGNNNCTG 3 cut(s) 340, 904, 950
CciI TCATGA 1 cut(s) 529
CseI GACGC 2 cut(s) 673, 962
Csp6I GTAC 1 cut(s) 986
CviAII CATG 4 cut(s) 11, 213, 530, 719
CviQI GTAC 1 cut(s) 986
DdeI CTNAG 6 cut(s) 85, 243, 286, 705, 767, 957
DpnI GATC 5 cut(s) 96, 309, 519, 829, 942
DpnII GATC 5 cut(s) 94, 307, 517, 827, 940
Eam1104I CTCTTC 2 cut(s) 177, 908
EarI CTCTTC 2 cut(s) 177, 908
Ecl136II GAGCTC 1 cut(s) 445
Eco24I GRGCYC 2 cut(s) 447, 810
Eco32I GATATC 1 cut(s) 601
Eco53kI GAGCTC 1 cut(s) 445
Eco57I CTGAAG 1 cut(s) 317
EcoICRI GAGCTC 1 cut(s) 445
EcoRII CCWGG 3 cut(s) 47, 142, 988
EcoRV GATATC 1 cut(s) 601
EcoT22I ATGCAT 1 cut(s) 720
EcoT38I GRGCYC 2 cut(s) 447, 810
FaeI CATG 4 cut(s) 14, 216, 533, 722
FaiI YATR 7 cut(s) 12, 214, 531, 720, 731, 798, 800
FalI AAGNNNNNCTT 2 cut(s) 53, 85
FaqI GGGAC 2 cut(s) 30, 322
FatI CATG 4 cut(s) 10, 212, 529, 718
FauNDI CATATG 1 cut(s) 798
FblI GTMKAC 1 cut(s) 999
Fnu4HI GCNGC 4 cut(s) 234, 399, 624, 860
FriOI GRGCYC 2 cut(s) 447, 810
Fsp4HI GCNGC 4 cut(s) 234, 399, 624, 860
FspBI CTAG 2 cut(s) 863, 966
GluI GCNGC 4 cut(s) 234, 399, 624, 860
GsuI CTGGAG 1 cut(s) 926
HapII CCGG 1 cut(s) 460
HgaI GACGC 2 cut(s) 673, 962
Hin1II CATG 4 cut(s) 14, 216, 533, 722
HincII GTYRAC 1 cut(s) 1000
HindII GTYRAC 1 cut(s) 1000
HindIII AAGCTT 2 cut(s) 67, 699
HinfI GANTC 5 cut(s) 35, 169, 181, 247, 356
HpaII CCGG 1 cut(s) 460
HphI GGTGA 1 cut(s) 592
Hpy166II GTNNAC 2 cut(s) 540, 1000
Hpy188I TCNGA 7 cut(s) 244, 273, 352, 663, 706, 770, 952
Hpy188III TCNNGA 4 cut(s) 176, 294, 305, 530
Hpy8I GTNNAC 2 cut(s) 540, 1000
Hpy99I CGWCG 1 cut(s) 974
HpyAV CCTTC 6 cut(s) 562, 577, 586, 776, 922, 928
HpyCH4III ACNGT 4 cut(s) 194, 372, 878, 891
HpyCH4V TGCA 9 cut(s) 152, 209, 236, 455, 496, 718, 745, 761, 790
HpyF10VI GCNNNNNNNGC 5 cut(s) 850, 859, 944, 953, 962
HpyF3I CTNAG 6 cut(s) 85, 243, 286, 705, 767, 957
Hsp92II CATG 4 cut(s) 14, 216, 533, 722
KpnI GGTACC 1 cut(s) 989
Kzo9I GATC 5 cut(s) 94, 307, 517, 827, 940
LguI GCTCTTC 1 cut(s) 908
LmnI GCTCC 6 cut(s) 145, 427, 463, 672, 901, 907
Lsp1109I GCAGC 3 cut(s) 220, 385, 871
LweI GCATC 1 cut(s) 705
MaeI CTAG 2 cut(s) 863, 966
MaeIII GTNAC 2 cut(s) 116, 409
MalI GATC 5 cut(s) 96, 309, 519, 829, 942
MboI GATC 5 cut(s) 94, 307, 517, 827, 940
MboII GAAGA 8 cut(s) 143, 164, 176, 255, 323, 516, 608, 925
MflI RGATCY 1 cut(s) 940
MhlI GDGCHC 2 cut(s) 447, 810
MluCI AATT 5 cut(s) 89, 325, 525, 722, 776
MlyI GAGTC 3 cut(s) 163, 190, 365
MmeI TCCRAC 1 cut(s) 641
MnlI CCTC 8 cut(s) 346, 526, 556, 667, 676, 700, 796, 859
Mph1103I ATGCAT 1 cut(s) 720
MseI TTAA 3 cut(s) 468, 647, 893
MslI CAYNNNNRTG 1 cut(s) 15
MspA1I CMGCKG 1 cut(s) 1005
MspI CCGG 1 cut(s) 460
MspR9I CCNGG 4 cut(s) 49, 144, 461, 990
Mva1269I GAATGC 1 cut(s) 259
MvaI CCWGG 3 cut(s) 49, 144, 990
MwoI GCNNNNNNNGC 5 cut(s) 850, 859, 944, 953, 962
NciI CCSGG 1 cut(s) 461
NdeI CATATG 1 cut(s) 798
NdeII GATC 5 cut(s) 94, 307, 517, 827, 940
NheI GCTAGC 1 cut(s) 965
NlaIII CATG 4 cut(s) 14, 216, 533, 722
NlaIV GGNNCC 1 cut(s) 987
NmuCI GTSAC 1 cut(s) 409
NsiI ATGCAT 1 cut(s) 720
NspI RCATGY 1 cut(s) 216
PagI TCATGA 1 cut(s) 529
PciSI GCTCTTC 1 cut(s) 908
PctI GAATGC 1 cut(s) 259
PfeI GAWTC 2 cut(s) 35, 247
PfoI TCCNGGA 1 cut(s) 459
PkrI GCNGC 4 cut(s) 235, 400, 625, 861
PleI GAGTC 3 cut(s) 163, 189, 364
PpsI GAGTC 3 cut(s) 163, 189, 364
Psp124BI GAGCTC 1 cut(s) 447
Psp6I CCWGG 3 cut(s) 47, 142, 988
PspGI CCWGG 3 cut(s) 47, 142, 988
PspN4I GGNNCC 1 cut(s) 987
PstI CTGCAG 1 cut(s) 457
PstNI CAGNNNCTG 3 cut(s) 340, 904, 950
PsuI RGATCY 1 cut(s) 940
PvuII CAGCTG 1 cut(s) 1005
RsaI GTAC 1 cut(s) 987
RsaNI GTAC 1 cut(s) 986
RseI CAYNNNNRTG 1 cut(s) 15
SacI GAGCTC 1 cut(s) 447
SalI GTCGAC 1 cut(s) 998
SapI GCTCTTC 1 cut(s) 908
SaqAI TTAA 3 cut(s) 468, 647, 893
SatI GCNGC 4 cut(s) 234, 399, 624, 860
Sau3AI GATC 5 cut(s) 94, 307, 517, 827, 940
SchI GAGTC 3 cut(s) 163, 190, 365
ScrFI CCNGG 4 cut(s) 49, 144, 461, 990
SduI GDGCHC 2 cut(s) 447, 810
SfaNI GCATC 1 cut(s) 705
SfcI CTRYAG 1 cut(s) 453
SmiMI CAYNNNNRTG 1 cut(s) 15
SmlI CTYRAG 2 cut(s) 446, 479
SmoI CTYRAG 2 cut(s) 446, 479
Sse9I AATT 5 cut(s) 89, 325, 525, 722, 776
SsiI CCGC 1 cut(s) 623
SspMI CTAG 2 cut(s) 863, 966
SstI GAGCTC 1 cut(s) 447
StyD4I CCNGG 4 cut(s) 47, 142, 459, 988
TaaI ACNGT 4 cut(s) 194, 372, 878, 891
TaqI TCGA 5 cut(s) 107, 122, 516, 603, 999
TasI AATT 5 cut(s) 89, 325, 525, 722, 776
TauI GCSGC 1 cut(s) 626
TfiI GAWTC 2 cut(s) 35, 247
Tru1I TTAA 3 cut(s) 468, 647, 893
Tru9I TTAA 3 cut(s) 468, 647, 893
TseFI GTSAC 1 cut(s) 409
TseI GCWGC 3 cut(s) 233, 398, 859
Tsp45I GTSAC 1 cut(s) 409
TspDTI ATGAA 8 cut(s) 255, 291, 518, 603, 711, 735, 746, 849
XapI RAATTY 1 cut(s) 89
XceI RCATGY 1 cut(s) 216
XmiI GTMKAC 1 cut(s) 999
XspI CTAG 2 cut(s) 863, 966
Zsp2I ATGCAT 1 cut(s) 720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.