Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0006769

Physical Location & Seq

Genomic Coordinates Forward (+)

964793 .. 967959

Gene Structure 3167 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0014700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGGGGAAATCCGGGGGTAGGAAAAAGAAGGGAGGTTCAAATCAAGTTTCGAATGATAGCAATTCGAATTCAGTTCCTAATGGCACTGTGGATTTGGACTCTTCAATCTTTTTGAAACGAGCCCATGAGCTCAAAGAGGAAGGGAACAAGAGGTTTCAGAGTAAGGACTATGTGGGTGCTCTTGAGCAGTATGATAATGCTCTCAAGCTCACTCCCAAGAACCACCTGGATAGGGCTATTTTTCATAGCAACAGGGCGGCTTGCTTGATGCAAATGAAGCCTATTGATTACGAAACTGTGATTTCCGAGTGCTCTATGGCGATTCAGGTTCAGCCCCGGTTTGTCCGGGCTCTTCTGAGGAGGGCTCGGGCATATGAGGCTATAGGGAAGCATGAAATGGCGATGCAGGATGTTCAGGTGCTGTTGGGGGCTGACCCGAATCACAGGGATGCTCTGGAGATTGCTCAGCGGGTGAGGACGGCTCTTGGGCCTCGTCAGGAGGCTCAGCAGGACCTCCAGAGCCGTCCGTCCCCTGCTGCTCTTGGGGCTTCTGCAGTTCGTGGTGCTCCGATTGGTGGTCTGGGGCCGTGTTTACCTGCCCGGCCTGCACCAAAGAAGGGAGCTGCTTCTGCTGGGGGTCCTGTTTTACCTTCAGTTAATAAGCTAGAGAAGCAACATACGGTTTCGCCATCTGAGAATGGACCTGAGCCCAAAACCCAGTTCCCGAAGCTTGTATTGAAGCCTTCTAATGGTACTTCAAGATCTTCTAACCCAAGTAAGGCTAACCAGAAGGAGCTATCATCTTCTTCGTCAGTGTCATTGCCTGTTCATAGGCAGCGTGCAGAGGCTGCAATTCGGTGGAGACCATTGAAGCTTGTGTATGATCACGACATAAGGCTTGCCCAAATGCCTGTGAATTGCAATTTCAGAGTTTTGAGAGAAACTGTAACAAAACGCTTTCCGTCATCAAAGTCAGTTTTGATTAAGTATAAGGATAATGATGGTGATTTGGTGACTATAACCTCGACCCCTGAACTTAGGTTGGCGGAGTCTTCTGCAGACAGGGTTATTCTAGAAGATCCTGAAGATAAGGCAGAATCAATTGGGATGTTAAGATTGCATATTGTGGAGGTGAGCCGTGAGCAGGAGCCACCTTTGTTAGAAGAAGAGGAGGAGAAACCTGTTGAAAATGAGGGGATCAAAGAAGATGAGAGTGGTTCTCATTCATCACTTGGTGAATCTGTCTTGGAAGCTGCTGATGATGAAATTGATAAGACAGAGAAAGAAGCTCCAAAAGAGAAACCAGGAGCCGGAGAAGATCCTGAGTGCAAGGAACTAGAGATGGATGATTGGTTGTTTGAGTTTTCTCAGCTCTTCCGCAGCCATGTTGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTGGGAATGGAGCTTTGCTCGGAAGCTCTTGAAGAGGCAGTAACTAGTGAAGAAGCTCAGATTCTTTTTGACAAGGCTGCCTCAAAGTTTCAGGAGGTGGCTGCATTGGCTTTCTTTAATTGGGGAAATGTTTATATGTGTGCGGCAAGGAAACGAATTCCCTTGGATGAGTCTGCTGGAAAGGATGTAGTGGCAACTCAGCTTCAAACTGCTTATGACTGGGTCAAGGATAAGTATTCCTTGGCCAGAGAGAAGTATGAGGAGGCACTCACGATCAAGCCTGACTTCTATGAAGGTTTGCTTGCATTGGGGCAGCAGCAATTTGAAATGGCCAAACTTCATTGGTCATTTGCACTTGCTAAGAAGATAGATCTCTCAACTTGCGATTCTACAGAAATGCTGAAGCTTTTTGACAGCGCAGAGGAGAAGATGAAAGTAGCAACTGAGATGTGGGAGAAGCTAGAGGAGCAGAGAGCAAAGGAGCTGAAGGATCCAAGTCCAAACAAGAAGGAAGAAATGCTGAAAAGAAGGAAAAAACAAGGAAGTGGCAATGAAGGTGAGTCATCAGGAGCAACTGAGTTGACGGCAGATGAAGCAGCAGAACAGGCAGCTGTTATGAGATCACAGATCCATCTCTTTTGGGGTAACATGCTTTTTGAGCGATCCCAGGTTGAATGCAAGTTGGGGCTGGATGGTTGGGAGAAAAACTTGGATGCTGCTGTGGAGCGCTTTAAGCTTGCTGGAGCTTCTGAGGTTGACATTGCAATGGTGCTGAAGAATCATTGCTCAAAGGTCGATGTAGTCGAGGAAGGTGAAAAACCAGTTCAGAATCTAGAAAGTACCGTGCCTGGTGAAGCAAATAAGGACAGTGAGGTTGTTGCAGAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000381 GO:0001510 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009506 GO:0009888 GO:0009987 GO:0010073 GO:0010468 GO:0016070 GO:0016071 GO:0016556 GO:0019219 GO:0019222 GO:0030054 GO:0031323 GO:0032259 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043484 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0048024 GO:0048507 GO:0048856 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055044 GO:0060255 GO:0065007 GO:0071704 GO:0080009 GO:0080090 GO:0090304 GO:1901360 GO:1903311

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Wtap

Protein Analysis

771

Amino Acids

85.5

Weight (kDa)

5.3

Isoelectric Point (pI)

48.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PB1	PF00564	289 - 377	6.7e-15	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006769)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54170
fragaria_vesca	FvH4_5g05840 FvH4_5g05840 FvH4_5g05840 FvH4_5g05840
malus_domestica	MD06G1169900.v1.1
prunus_persica	Prupe.5G169400_v2.0.a1 Prupe.5G169400_v2.0.a1 Prupe.5G169400_v2.0.a1
pyrus_communis	pycom06g15130
rosa_chinensis	RchiOBHm_Chr3g0448991 RchiOBHm_Chr7g0192981
rosa_laevigata	RLG00000004305 RLG00000014553
rosa_multiflora	Rmu_sc0002040.1_g000066 Rmu_sc0027188.1_g000001
rosa_roxburghii	Rroxscaffold_3G00262480
rosa_rugosa	Rorug05G0014700 Rorug07G0007000 Rorug07G0007100 Rorug07G0007200
rosa_samantha	Rh7AG132000 Rh7BG132800 Rh7CG136000 Rh7DG133900
rosa_wichuraiana	Rw7G011260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	604
AciI	CCGC	5 cut(s)	257, 469, 1046, 1378, 1568
AclWI	GGATC	8 cut(s)	1073, 1205, 1313, 1391, 1910, 1923, 2047, 2082
AcoI	YGGCCR	2 cut(s)	1668, 1755
AcsI	RAATTY	2 cut(s)	67, 1581
AcuI	CTGAAG	5 cut(s)	636, 1104, 1847, 1931, 2219
AdeI	CACNNNGTG	1 cut(s)	1235
AfaI	GTAC	2 cut(s)	754, 2266
AfeI	AGCGCT	1 cut(s)	2153
AfiI	CCNNNNNNNGG	8 cut(s)	18, 232, 575, 617, 749, 778, 1144, 1310
AhlI	ACTAGT	1 cut(s)	1469
AjnI	CCWGG	4 cut(s)	225, 1303, 2091, 2272
AjuI	GAANNNNNNNTTGG	2 cut(s)	704, 736
Alw21I	GWGCWC	4 cut(s)	132, 181, 314, 568
Alw26I	GTCTC	1 cut(s)	856
AlwI	GGATC	8 cut(s)	1073, 1205, 1313, 1391, 1910, 1923, 2047, 2082
AlwNI	CAGNNNCTG	2 cut(s)	421, 848
Ama87I	CYCGRG	1 cut(s)	366
Aor51HI	AGCGCT	1 cut(s)	2153
AoxI	GGCC	5 cut(s)	488, 584, 602, 1668, 1755
ApoI	RAATTY	2 cut(s)	67, 1581
AspLEI	GCGC	2 cut(s)	1844, 2154
AspS9I	GGNCC	5 cut(s)	488, 511, 584, 638, 701
AsuC2I	CCSGG	4 cut(s)	13, 337, 347, 601
AsuHPI	GGTGA	8 cut(s)	484, 1016, 1024, 1144, 1247, 1994, 2249, 2288
AsuII	TTCGAA	2 cut(s)	50, 65
AvaI	CYCGRG	1 cut(s)	366
AvaII	GGWCC	3 cut(s)	511, 638, 701
BalI	TGGCCA	2 cut(s)	1670, 1757
BamHI	GGATCC	1 cut(s)	1915
BanII	GRGCYC	5 cut(s)	124, 132, 352, 367, 711
BbsI	GAAGAC	1 cut(s)	1044
Bbv12I	GWGCWC	4 cut(s)	132, 181, 314, 568
BccI	CCATC	5 cut(s)	697, 995, 1336, 2064, 2111
BceAI	ACGGC	5 cut(s)	495, 507, 571, 1122, 2025
BciT130I	CCWGG	4 cut(s)	227, 1305, 2093, 2274
BclI	TGATCA	1 cut(s)	883
BcnI	CCSGG	4 cut(s)	13, 337, 347, 601
BcoDI	GTCTC	1 cut(s)	856
BcuI	ACTAGT	1 cut(s)	1469
BfaI	CTAG	6 cut(s)	665, 1073, 1337, 1470, 1886, 2258
BfmI	CTRYAG	4 cut(s)	381, 552, 1056, 1815
BfoI	RGCGCY	1 cut(s)	2155
BfuAI	ACCTGC	1 cut(s)	604
BglII	AGATCT	2 cut(s)	761, 1795
BlpI	GCTNAGC	2 cut(s)	465, 504
Bme1390I	CCNGG	8 cut(s)	13, 227, 337, 347, 601, 1305, 2093, 2274
Bme18I	GGWCC	3 cut(s)	511, 638, 701
BmeT110I	CYCGRG	1 cut(s)	366
BmgT120I	GGNCC	5 cut(s)	488, 511, 584, 638, 701
BmiI	GGNNCC	5 cut(s)	585, 639, 1149, 1309, 1917
BmrFI	CCNGG	8 cut(s)	13, 227, 337, 347, 601, 1305, 2093, 2274
BmrI	ACTGGG	2 cut(s)	712, 1654
BmsI	GCATC	5 cut(s)	258, 393, 439, 1393, 2128
BmuI	ACTGGG	2 cut(s)	712, 1654
BpiI	GAAGAC	1 cut(s)	1044
BplI	GAGNNNNNCTC	8 cut(s)	349, 381, 466, 498, 1204, 1236, 1427, 1459
BpmI	CTGGAG	3 cut(s)	476, 500, 2187
Bpu10I	CCTNAGC	1 cut(s)	705
Bpu1102I	GCTNAGC	2 cut(s)	465, 504
Bpu14I	TTCGAA	2 cut(s)	50, 65
BpuEI	CTTGAG	2 cut(s)	188, 203
BpuMI	CCSGG	4 cut(s)	13, 337, 347, 601
BsaI	GGTCTC	1 cut(s)	856
BsaJI	CCNNGG	5 cut(s)	12, 335, 1587, 1665, 2091
Bsc4I	CCNNNNNNNGG	8 cut(s)	18, 232, 575, 617, 749, 778, 1144, 1310
Bse1I	ACTGG	3 cut(s)	718, 1649, 2246
Bse3DI	GCAATG	5 cut(s)	818, 1981, 2184, 2196, 2206
BseBI	CCWGG	4 cut(s)	227, 1305, 2093, 2274
BseDI	CCNNGG	5 cut(s)	12, 335, 1587, 1665, 2091
BseGI	GGATG	8 cut(s)	415, 454, 1113, 1351, 1597, 1615, 2122, 2143
BseLI	CCNNNNNNNGG	8 cut(s)	18, 232, 575, 617, 749, 778, 1144, 1310
BseMI	GCAATG	5 cut(s)	818, 1981, 2184, 2196, 2206
BseNI	ACTGG	3 cut(s)	718, 1649, 2246
BseRI	GAGGAG	6 cut(s)	373, 1184, 1187, 1700, 1862, 1904
BseYI	CCCAGC	2 cut(s)	632, 1426
BsgI	GTGCAG	2 cut(s)	591, 861
BshFI	GGCC	5 cut(s)	490, 586, 604, 1670, 1757
BsiHKAI	GWGCWC	4 cut(s)	132, 181, 314, 568
BsiHKCI	CYCGRG	1 cut(s)	366
BsiSI	CCGG	5 cut(s)	12, 337, 346, 601, 1311
BslFI	GGGAC	1 cut(s)	514
BslI	CCNNNNNNNGG	8 cut(s)	18, 232, 575, 617, 749, 778, 1144, 1310
BsmAI	GTCTC	1 cut(s)	856
BsmFI	GGGAC	1 cut(s)	514
BsmI	GAATGC	1 cut(s)	2105
BsnI	GGCC	5 cut(s)	490, 586, 604, 1670, 1757
Bso31I	GGTCTC	1 cut(s)	856
BsoBI	CYCGRG	1 cut(s)	366
Bsp119I	TTCGAA	2 cut(s)	50, 65
Bsp1286I	GDGCHC	8 cut(s)	124, 132, 181, 314, 352, 367, 568, 711
Bsp1720I	GCTNAGC	2 cut(s)	465, 504
BspACI	CCGC	5 cut(s)	257, 469, 1046, 1378, 1568
BspANI	GGCC	5 cut(s)	490, 586, 604, 1670, 1757
BspLI	GGNNCC	5 cut(s)	585, 639, 1149, 1309, 1917
BspMAI	CTGCAG	2 cut(s)	556, 1060
BspMI	ACCTGC	1 cut(s)	604
BspPI	GGATC	8 cut(s)	1073, 1205, 1313, 1391, 1910, 1923, 2047, 2082
BspQI	GCTCTTC	2 cut(s)	357, 1379
BspT104I	TTCGAA	2 cut(s)	50, 65
BspTNI	GGTCTC	1 cut(s)	856
BsrDI	GCAATG	5 cut(s)	818, 1981, 2184, 2196, 2206
BsrI	ACTGG	3 cut(s)	718, 1649, 2246
BssECI	CCNNGG	5 cut(s)	12, 335, 1587, 1665, 2091
BssT1I	CCWWGG	2 cut(s)	1587, 1665
Bst2UI	CCWGG	4 cut(s)	227, 1305, 2093, 2274
Bst4CI	ACNGT	6 cut(s)	88, 298, 682, 946, 2269, 2294
Bst6I	CTCTTC	5 cut(s)	106, 357, 1161, 1379, 1452
BstAPI	GCANNNNNTGC	1 cut(s)	848
BstBI	TTCGAA	2 cut(s)	50, 65
BstC8I	GCNNGC	6 cut(s)	262, 606, 840, 900, 1728, 2163
BstF5I	GGATG	8 cut(s)	415, 454, 1113, 1351, 1597, 1615, 2122, 2143
BstH2I	RGCGCY	1 cut(s)	2155
BstHHI	GCGC	2 cut(s)	1844, 2154
BstMAI	GTCTC	1 cut(s)	856
BstNI	CCWGG	4 cut(s)	227, 1305, 2093, 2274
BstNSI	RCATGY	1 cut(s)	2077
BstSCI	CCNGG	8 cut(s)	11, 225, 335, 345, 599, 1303, 2091, 2272
BstSFI	CTRYAG	4 cut(s)	381, 552, 1056, 1815
BstV2I	GAAGAC	1 cut(s)	1044
BstX2I	RGATCY	6 cut(s)	761, 1078, 1318, 1795, 1915, 2052
BstYI	RGATCY	6 cut(s)	761, 1078, 1318, 1795, 1915, 2052
BsuRI	GGCC	5 cut(s)	490, 586, 604, 1670, 1757
BtgZI	GCGATG	1 cut(s)	416
BtsCI	GGATG	8 cut(s)	415, 454, 1113, 1351, 1597, 1615, 2122, 2143
BtsIMutI	CAGTG	3 cut(s)	84, 819, 2299
BveI	ACCTGC	1 cut(s)	604
Cac8I	GCNNGC	6 cut(s)	262, 606, 840, 900, 1728, 2163
CaiI	CAGNNNCTG	2 cut(s)	421, 848
CfoI	GCGC	2 cut(s)	1844, 2154
Cfr13I	GGNCC	5 cut(s)	488, 511, 584, 638, 701
Csp6I	GTAC	2 cut(s)	753, 2265
CviAII	CATG	5 cut(s)	125, 392, 1385, 1421, 2074
CviQI	GTAC	2 cut(s)	753, 2265
DraIII	CACNNNGTG	1 cut(s)	1235
EaeI	YGGCCR	2 cut(s)	1668, 1755
Eam1104I	CTCTTC	5 cut(s)	106, 357, 1161, 1379, 1452
EarI	CTCTTC	5 cut(s)	106, 357, 1161, 1379, 1452
EciI	GGCGGA	1 cut(s)	1061
Ecl136II	GAGCTC	1 cut(s)	130
Eco130I	CCWWGG	2 cut(s)	1587, 1665
Eco24I	GRGCYC	5 cut(s)	124, 132, 352, 367, 711
Eco31I	GGTCTC	1 cut(s)	856
Eco47I	GGWCC	3 cut(s)	511, 638, 701
Eco47III	AGCGCT	1 cut(s)	2153
Eco53kI	GAGCTC	1 cut(s)	130
Eco57I	CTGAAG	5 cut(s)	636, 1104, 1847, 1931, 2219
Eco88I	CYCGRG	1 cut(s)	366
EcoICRI	GAGCTC	1 cut(s)	130
EcoO109I	RGGNCCY	2 cut(s)	511, 638
EcoRI	GAATTC	2 cut(s)	67, 1581
EcoRII	CCWGG	4 cut(s)	225, 1303, 2091, 2272
EcoT14I	CCWWGG	2 cut(s)	1587, 1665
EcoT38I	GRGCYC	5 cut(s)	124, 132, 352, 367, 711
ErhI	CCWWGG	2 cut(s)	1587, 1665
FaeI	CATG	5 cut(s)	128, 395, 1388, 1424, 2077
FalI	AAGNNNNNCTT	6 cut(s)	1649, 1681, 1694, 1726, 1710, 1742
FaqI	GGGAC	1 cut(s)	514
FatI	CATG	5 cut(s)	124, 391, 1384, 1420, 2073
FauI	CCCGC	1 cut(s)	462
FauNDI	CATATG	1 cut(s)	373
FbaI	TGATCA	1 cut(s)	883
FokI	GGATG	8 cut(s)	422, 461, 1120, 1358, 1604, 1622, 2129, 2150
FriOI	GRGCYC	5 cut(s)	124, 132, 352, 367, 711
FspBI	CTAG	6 cut(s)	665, 1073, 1337, 1470, 1886, 2258
GlaI	GCGC	2 cut(s)	1843, 2153
GsaI	CCCAGC	2 cut(s)	636, 1430
GsuI	CTGGAG	3 cut(s)	476, 500, 2187
HaeII	RGCGCY	1 cut(s)	2155
HaeIII	GGCC	5 cut(s)	490, 586, 604, 1670, 1757
HapII	CCGG	5 cut(s)	12, 337, 346, 601, 1311
HhaI	GCGC	2 cut(s)	1844, 2154
Hin1II	CATG	5 cut(s)	128, 395, 1388, 1424, 2077
Hin6I	GCGC	2 cut(s)	1842, 2152
HinP1I	GCGC	2 cut(s)	1842, 2152
HincII	GTYRAC	2 cut(s)	2007, 2182
HindII	GTYRAC	2 cut(s)	2007, 2182
HindIII	AAGCTT	4 cut(s)	728, 872, 1829, 2159
HpaII	CCGG	5 cut(s)	12, 337, 346, 601, 1311
HphI	GGTGA	8 cut(s)	484, 1016, 1024, 1144, 1247, 1994, 2249, 2288
Hpy166II	GTNNAC	3 cut(s)	593, 2007, 2182
Hpy8I	GTNNAC	3 cut(s)	593, 2007, 2182
HpyCH4III	ACNGT	6 cut(s)	88, 298, 682, 946, 2269, 2294
Hsp92II	CATG	5 cut(s)	128, 395, 1388, 1424, 2077
HspAI	GCGC	2 cut(s)	1842, 2152
Ksp22I	TGATCA	1 cut(s)	883
LguI	GCTCTTC	2 cut(s)	357, 1379
LweI	GCATC	5 cut(s)	258, 393, 439, 1393, 2128
MaeI	CTAG	6 cut(s)	665, 1073, 1337, 1470, 1886, 2258
MaeIII	GTNAC	4 cut(s)	946, 1012, 1465, 2069
MfeI	CAATTG	1 cut(s)	1101
MflI	RGATCY	6 cut(s)	761, 1078, 1318, 1795, 1915, 2052
MhlI	GDGCHC	8 cut(s)	124, 132, 181, 314, 352, 367, 568, 711
MlsI	TGGCCA	2 cut(s)	1670, 1757
MluNI	TGGCCA	2 cut(s)	1670, 1757
MlyI	GAGTC	4 cut(s)	92, 1058, 1604, 1994
Mox20I	TGGCCA	2 cut(s)	1670, 1757
MscI	TGGCCA	2 cut(s)	1670, 1757
MseI	TTAA	5 cut(s)	657, 984, 1112, 1542, 2157
MslI	CAYNNNNRTG	2 cut(s)	447, 2189
Msp20I	TGGCCA	2 cut(s)	1670, 1757
MspA1I	CMGCKG	2 cut(s)	469, 2036
MspI	CCGG	5 cut(s)	12, 337, 346, 601, 1311
MspR9I	CCNGG	8 cut(s)	13, 227, 337, 347, 601, 1305, 2093, 2274
MunI	CAATTG	1 cut(s)	1101
Mva1269I	GAATGC	1 cut(s)	2105
MvaI	CCWGG	4 cut(s)	227, 1305, 2093, 2274
NciI	CCSGG	4 cut(s)	13, 337, 347, 601
NdeI	CATATG	1 cut(s)	373
NlaIII	CATG	5 cut(s)	128, 395, 1388, 1424, 2077
NlaIV	GGNNCC	5 cut(s)	585, 639, 1149, 1309, 1917
NmuCI	GTSAC	1 cut(s)	1012
NspI	RCATGY	1 cut(s)	2077
NspV	TTCGAA	2 cut(s)	50, 65
PciSI	GCTCTTC	2 cut(s)	357, 1379
PcsI	WCGNNNNNNNCGW	1 cut(s)	2226
PctI	GAATGC	1 cut(s)	2105
PfeI	GAWTC	8 cut(s)	322, 439, 1097, 1238, 1486, 1811, 2203, 2254
PflFI	GACNNNGTC	1 cut(s)	1646
PleI	GAGTC	4 cut(s)	92, 1057, 1603, 1993
PpsI	GAGTC	4 cut(s)	92, 1057, 1603, 1993
PpuMI	RGGWCCY	2 cut(s)	511, 638
Psp124BI	GAGCTC	1 cut(s)	132
Psp5II	RGGWCCY	2 cut(s)	511, 638
Psp6I	CCWGG	4 cut(s)	225, 1303, 2091, 2272
PspFI	CCCAGC	2 cut(s)	632, 1426
PspGI	CCWGG	4 cut(s)	225, 1303, 2091, 2272
PspN4I	GGNNCC	5 cut(s)	585, 639, 1149, 1309, 1917
PspPI	GGNCC	5 cut(s)	488, 511, 584, 638, 701
PspPPI	RGGWCCY	2 cut(s)	511, 638
PstI	CTGCAG	2 cut(s)	556, 1060
PstNI	CAGNNNCTG	2 cut(s)	421, 848
PsuI	RGATCY	6 cut(s)	761, 1078, 1318, 1795, 1915, 2052
PsyI	GACNNNGTC	1 cut(s)	1646
PvuII	CAGCTG	1 cut(s)	2036
RsaI	GTAC	2 cut(s)	754, 2266
RsaNI	GTAC	2 cut(s)	753, 2265
RseI	CAYNNNNRTG	2 cut(s)	447, 2189
SacI	GAGCTC	1 cut(s)	132
SapI	GCTCTTC	2 cut(s)	357, 1379
SaqAI	TTAA	5 cut(s)	657, 984, 1112, 1542, 2157
Sau96I	GGNCC	5 cut(s)	488, 511, 584, 638, 701
SchI	GAGTC	4 cut(s)	92, 1058, 1604, 1994
ScrFI	CCNGG	8 cut(s)	13, 227, 337, 347, 601, 1305, 2093, 2274
SduI	GDGCHC	8 cut(s)	124, 132, 181, 314, 352, 367, 568, 711
SfaNI	GCATC	5 cut(s)	258, 393, 439, 1393, 2128
SfcI	CTRYAG	4 cut(s)	381, 552, 1056, 1815
SfuI	TTCGAA	2 cut(s)	50, 65
SinI	GGWCC	3 cut(s)	511, 638, 701
SmiMI	CAYNNNNRTG	2 cut(s)	447, 2189
SmlI	CTYRAG	2 cut(s)	182, 203
SmoI	CTYRAG	2 cut(s)	182, 203
SpeI	ACTAGT	1 cut(s)	1469
SsiI	CCGC	5 cut(s)	257, 469, 1046, 1378, 1568
SspMI	CTAG	6 cut(s)	665, 1073, 1337, 1470, 1886, 2258
SstI	GAGCTC	1 cut(s)	132
StyD4I	CCNGG	8 cut(s)	11, 225, 335, 345, 599, 1303, 2091, 2272
StyI	CCWWGG	2 cut(s)	1587, 1665
TaaI	ACNGT	6 cut(s)	88, 298, 682, 946, 2269, 2294
TaqI	TCGA	5 cut(s)	50, 65, 1025, 2220, 2229
TauI	GCSGC	2 cut(s)	260, 1571
TfiI	GAWTC	8 cut(s)	322, 439, 1097, 1238, 1486, 1811, 2203, 2254
Tru1I	TTAA	5 cut(s)	657, 984, 1112, 1542, 2157
Tru9I	TTAA	5 cut(s)	657, 984, 1112, 1542, 2157
TscAI	CASTG	3 cut(s)	91, 819, 2299
TseFI	GTSAC	1 cut(s)	1012
Tsp45I	GTSAC	1 cut(s)	1012
TspGWI	ACGGA	2 cut(s)	516, 951
TspRI	CASTG	3 cut(s)	91, 819, 2299
Tth111I	GACNNNGTC	1 cut(s)	1646
VpaK11BI	GGWCC	3 cut(s)	511, 638, 701
XapI	RAATTY	2 cut(s)	67, 1581
XbaI	TCTAGA	2 cut(s)	1072, 2257
XceI	RCATGY	1 cut(s)	2077
XcmI	CCANNNNNNNNNTGG	1 cut(s)	223
XspI	CTAG	6 cut(s)	665, 1073, 1337, 1470, 1886, 2258

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.