RchiOBHm_Chr3g0448991

serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
979772 .. 980837
1066 bp
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UTR
Exon/CDS
Intron
PRQ41640

Sequence Viewer

Length: 171 bp
ATGGACCAATCGGTTATTGATGACATCTTCAGCCGTCTTCTTGAAGTCCGAGGCCGACCCGGAAAGCAGGTGCAGGCGTGCAGCTATCGGAGTCCGAGATCCGACAACTCTGCTCTGCCTCTAAAGATATATTCTTGCAACAACCCAATTTGTGAGTACTCTTGCTCTTGA

Protein Analysis

56

Amino Acids

6.31

Weight (kDa)

7.64

Isoelectric Point (pI)

62.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 58
Acc36I ACCTGC 1 cut(s) 58
AclWI GGATC 1 cut(s) 93
AcuI CTGAAG 1 cut(s) 13
AfaI GTAC 1 cut(s) 158
AgsI TTSAA 1 cut(s) 44
AluBI AGCT 1 cut(s) 84
AluI AGCT 1 cut(s) 84
AlwI GGATC 1 cut(s) 93
AoxI GGCC 1 cut(s) 52
ApeKI GCWGC 1 cut(s) 81
AspS9I GGNCC 1 cut(s) 4
AsuC2I CCSGG 1 cut(s) 60
AvaII GGWCC 1 cut(s) 4
BbsI GAAGAC 1 cut(s) 29
BbvI GCAGC 1 cut(s) 93
BceAI ACGGC 1 cut(s) 18
BcgI CGANNNNNNTGC 2 cut(s) 92, 126
BcnI CCSGG 1 cut(s) 60
BfuAI ACCTGC 1 cut(s) 58
BisI GCNGC 1 cut(s) 82
BlsI GCNGC 1 cut(s) 83
BmcAI AGTACT 1 cut(s) 158
Bme1390I CCNGG 1 cut(s) 60
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BmrFI CCNGG 1 cut(s) 60
BpiI GAAGAC 1 cut(s) 29
BpuMI CCSGG 1 cut(s) 60
BsaJI CCNNGG 1 cut(s) 49
BseDI CCNNGG 1 cut(s) 49
BseXI GCAGC 1 cut(s) 93
BsgI GTGCAG 2 cut(s) 92, 100
BshFI GGCC 1 cut(s) 54
BsiSI CCGG 1 cut(s) 60
BsnI GGCC 1 cut(s) 54
Bsp143I GATC 1 cut(s) 98
BspANI GGCC 1 cut(s) 54
BspMI ACCTGC 1 cut(s) 58
BspPI GGATC 1 cut(s) 93
BssECI CCNNGG 1 cut(s) 49
BssMI GATC 1 cut(s) 98
BstC8I GCNNGC 2 cut(s) 75, 79
BstKTI GATC 1 cut(s) 101
BstMBI GATC 1 cut(s) 98
BstSCI CCNGG 1 cut(s) 58
BstV1I GCAGC 1 cut(s) 93
BstV2I GAAGAC 1 cut(s) 29
BstX2I RGATCY 1 cut(s) 98
BstYI RGATCY 1 cut(s) 98
BsuRI GGCC 1 cut(s) 54
BveI ACCTGC 1 cut(s) 58
Cac8I GCNNGC 2 cut(s) 75, 79
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 1 cut(s) 157
CviJI RGCY 3 cut(s) 33, 54, 84
CviKI_1 RGCY 3 cut(s) 33, 54, 84
CviQI GTAC 1 cut(s) 157
DpnI GATC 1 cut(s) 100
DpnII GATC 1 cut(s) 98
Eco47I GGWCC 1 cut(s) 4
Eco57I CTGAAG 1 cut(s) 13
FaiI YATR 1 cut(s) 130
Fnu4HI GCNGC 1 cut(s) 82
Fsp4HI GCNGC 1 cut(s) 82
GluI GCNGC 1 cut(s) 82
HaeIII GGCC 1 cut(s) 54
HapII CCGG 1 cut(s) 60
HinfI GANTC 1 cut(s) 91
HpaII CCGG 1 cut(s) 60
Hpy188I TCNGA 4 cut(s) 50, 90, 96, 103
Hpy188III TCNNGA 2 cut(s) 41, 168
HpyCH4V TGCA 3 cut(s) 73, 81, 138
Kzo9I GATC 1 cut(s) 98
LpnPI CCDG 3 cut(s) 53, 59, 73
Lsp1109I GCAGC 1 cut(s) 93
MalI GATC 1 cut(s) 100
MboI GATC 1 cut(s) 98
MboII GAAGA 2 cut(s) 19, 29
MflI RGATCY 1 cut(s) 98
MluCI AATT 1 cut(s) 147
MlyI GAGTC 1 cut(s) 100
MmeI TCCRAC 1 cut(s) 126
MnlI CCTC 2 cut(s) 44, 129
MspI CCGG 1 cut(s) 60
MspR9I CCNGG 1 cut(s) 60
NciI CCSGG 1 cut(s) 60
NdeII GATC 1 cut(s) 98
PaqCI CACCTGC 1 cut(s) 58
PkrI GCNGC 1 cut(s) 83
PleI GAGTC 1 cut(s) 99
PpsI GAGTC 1 cut(s) 99
PspPI GGNCC 1 cut(s) 4
PsuI RGATCY 1 cut(s) 98
RsaI GTAC 1 cut(s) 158
RsaNI GTAC 1 cut(s) 157
SatI GCNGC 1 cut(s) 82
Sau3AI GATC 1 cut(s) 98
Sau96I GGNCC 1 cut(s) 4
ScaI AGTACT 1 cut(s) 158
SchI GAGTC 1 cut(s) 100
ScrFI CCNGG 1 cut(s) 60
SetI ASST 2 cut(s) 72, 86
SgeI CNNG 9 cut(s) 53, 62, 71, 72, 80, 86, 90, 108, 147
SinI GGWCC 1 cut(s) 4
Sse9I AATT 1 cut(s) 147
StyD4I CCNGG 1 cut(s) 58
TasI AATT 1 cut(s) 147
TatI WGTACW 1 cut(s) 156
TseI GCWGC 1 cut(s) 81
VpaK11BI GGWCC 1 cut(s) 4
ZrmI AGTACT 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.