Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0002884

Physical Location & Seq

Genomic Coordinates Reverse (-)

33826369 .. 33828622

Gene Structure 2254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1203800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGGAATTCGAAAACCAGGCCAACCAAACTCACAACATCCGCCTCACATGTTGTTCTTGGTCTTGGATGAAGTTCACGTTCTTGGCCGTGCTCTATTGCTTGGTATTATCACCTGCATCGGCATATGATCCGTTGGATCCAACCGGAAACATAACGATCAAATGGGATGTTATGTCTTGGACACCAGATGGTTATGTTGCTGCAGTGACGATGAACAACTTCCAAATGTACCGGCAAATCTCAAACCCGGGGTGGACTCTAACATGGTCGTGGGCGAAAAAGGAAGTGATTTGGACAATGGTGGGAGCTCAAACCACAGAGCAAGGAGACTGTTCCAAATTCAAAGCAGCCATCCCACATTGCTGCAAGAAAACTCCAACAGTTGTCGACTTGCTTCCCGGAGTTCCCTACAACCAGCAGTTCACTAATTGTTGCAAAGGTGGTGTCCTAGCGTCTTGGGGACAGGATCCCTTAGCTGCAGTCTCCGGCTTCCAGGTCAGTGTCGGGCAAGCCGGCACTTCAAACAAGACGGTGAAACTGCCCAAAAACTTCACCTTGCTTGGTCCCGGACCAGGGTACACTTGCGGCCCTGCAAAGGTCGTGCCGTCCACAGTCTTCCTCACGACTGATCGCCGGCGAAAGACTCAAGCACTCATGACATGGAATGTGACGTGCACCTATTCGCAGTTTCTTGCCTCCAAGCATCCGAGCTGTTGTGTTTCCTTTTCGTCCTTCTACAATGAAACCATTGTTCCATGCCCGTCTTGCGCTTGTGGTTGTCACAACAAAAATAATTGTCTCAAGAGTGACTCAGTGTTAGCACACAAAACAGGAATAAACACACCTAAAAAGGATAATTCGCCATTGCTTCAGTGCACACATCATATGTGCCCTATCCGAGTACACTGGCACGTCAAGCAAAACTATAAGGACTACTGGCGCGTCAAGATGTCTGTCACCAACTTCAACTATCGGATGAACTACACAGAGTGGACGCTCGTTGCACAACATCCTAATCTCAACAACGTCACTCAAGTCTTTAGCTTTGATTACAAGCCCCTCATCCCCTACCAATCCGTCAATGACACTGGTATGTTCTATGGCATGAAGTTTTACAATGACCTATTAATGGAAGCTGGGCCATTAGGAAATATTCAGTCTGAGGTGCTTATGCGCAAGGACCAGAATACCTTCACGTTCAAACAAGGATGGGCGTTTCCTCGAAGAGTTTACTTCAATGGCGATGAATGCATGCTGCCCCCGCCAGATGCATACCCATCTCTACCCAACTCCGGCCACGTAAATTCTAACTCAATCCTACAAAAGGCAGCCTCTGTGCTTCTAATAATGTTTTCTATATGTTTTTCACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COBRA

Protein Analysis

458

Amino Acids

51.45

Weight (kDa)

8.86

Isoelectric Point (pI)

37.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COBRA	PF04833	65 - 228	3.3e-66	COBRA-like protein
COB_C	PF25079	237 - 426	3.2e-54	COBRA family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002884)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15630 AT5G15630 AT5G15630 AT5G15630 AT5G15630
fragaria_vesca	FvH4_5g13560 FvH4_6g46470 FvH4_6g46470
malus_domestica	MD06G1203800.v1.1 MD09G1072900.v1.1 MD14G1214900.v1.1 MD17G1064300.v1.1
prunus_persica	Prupe.3G250300_v2.0.a1 Prupe.5G207900_v2.0.a1 Prupe.5G207900_v2.0.a1
pyrus_communis	pycom06g18200 pycom17g06440
rosa_chinensis	RchiOBHm_Chr2g0165021 RchiOBHm_Chr7g0183391
rosa_laevigata	RLG00000005050 RLG00000021507
rosa_multiflora	Rmu_sc0000951.1_g000011
rosa_roxburghii	Rroxscaffold_2G00086110 Rroxscaffold_3G00270480
rosa_rugosa	Rorug02G0512400 Rorug02G0512400 Rorug06G0457600 Rorug06G0457700
rosa_samantha	Rh2AG580400 Rh2BG591700 Rh2CG562200 Rh2DG601800 Rh7AG058800 Rh7BG058800 Rh7CG060400 Rh7DG058500
rosa_wichuraiana	Rw2G048180 Rw7G004840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	121
Acc16I	TGCGCA	1 cut(s)	1175
Acc36I	ACCTGC	1 cut(s)	121
AccI	GTMKAC	1 cut(s)	387
AccII	CGCG	1 cut(s)	942
AciI	CCGC	3 cut(s)	40, 585, 1262
AclWI	GGATC	5 cut(s)	122, 131, 144, 461, 474
AcoI	YGGCCR	2 cut(s)	84, 1294
AcsI	RAATTY	3 cut(s)	5, 338, 1303
AcuI	CTGAAG	1 cut(s)	854
AdeI	CACNNNGTG	1 cut(s)	990
AfaI	GTAC	3 cut(s)	230, 578, 903
AfiI	CCNNNNNNNGG	6 cut(s)	572, 573, 595, 1129, 1292, 1324
AflIII	ACRYGT	1 cut(s)	47
AgsI	TTSAA	5 cut(s)	343, 522, 967, 1201, 1237
AjiI	CACGTC	2 cut(s)	672, 913
AjnI	CCWGG	3 cut(s)	15, 492, 571
AluBI	AGCT	5 cut(s)	308, 476, 711, 1044, 1136
AluI	AGCT	5 cut(s)	308, 476, 711, 1044, 1136
Alw21I	GWGCWC	4 cut(s)	93, 310, 677, 878
Alw26I	GTCTC	3 cut(s)	321, 487, 803
Alw44I	GTGCAC	2 cut(s)	673, 874
AlwI	GGATC	5 cut(s)	122, 131, 144, 461, 474
AlwNI	CAGNNNCTG	1 cut(s)	1334
Ama87I	CYCGRG	1 cut(s)	247
AoxI	GGCC	5 cut(s)	18, 84, 586, 1139, 1294
ApaLI	GTGCAC	2 cut(s)	673, 874
ApeKI	GCWGC	6 cut(s)	200, 347, 363, 476, 1255, 1328
ApoI	RAATTY	3 cut(s)	5, 338, 1303
ArsI	GACNNNNNNTTYG	2 cut(s)	429, 461
AseI	ATTAAT	1 cut(s)	1127
Asp700I	GAANNNNTTC	2 cut(s)	218, 1190
AspLEI	GCGC	3 cut(s)	770, 942, 1176
AspS9I	GGNCC	5 cut(s)	563, 569, 587, 1139, 1180
AsuC2I	CCSGG	4 cut(s)	248, 249, 399, 567
AsuHPI	GGTGA	4 cut(s)	102, 544, 544, 949
AsuII	TTCGAA	1 cut(s)	9
AvaI	CYCGRG	1 cut(s)	247
AvaII	GGWCC	3 cut(s)	563, 569, 1180
BaeGI	GKGCMC	3 cut(s)	677, 878, 893
BamHI	GGATCC	2 cut(s)	136, 466
BanII	GRGCYC	1 cut(s)	310
BbsI	GAAGAC	1 cut(s)	607
Bbv12I	GWGCWC	4 cut(s)	93, 310, 677, 878
BbvI	GCAGC	6 cut(s)	187, 350, 359, 463, 1242, 1340
BccI	CCATC	4 cut(s)	182, 359, 1203, 1285
BceAI	ACGGC	2 cut(s)	71, 589
BciT130I	CCWGG	3 cut(s)	17, 494, 573
BcnI	CCSGG	4 cut(s)	248, 249, 399, 567
BcoDI	GTCTC	3 cut(s)	321, 487, 803
BfaI	CTAG	1 cut(s)	449
BfmI	CTRYAG	2 cut(s)	201, 477
BfuAI	ACCTGC	1 cut(s)	121
BisI	GCNGC	7 cut(s)	201, 348, 364, 477, 586, 1256, 1329
BlsI	GCNGC	7 cut(s)	202, 349, 365, 478, 587, 1257, 1330
Bme1390I	CCNGG	7 cut(s)	17, 248, 249, 399, 494, 567, 573
Bme18I	GGWCC	3 cut(s)	563, 569, 1180
BmeT110I	CYCGRG	1 cut(s)	247
BmgBI	CACGTC	2 cut(s)	672, 913
BmgT120I	GGNCC	5 cut(s)	563, 569, 587, 1139, 1180
BmiI	GGNNCC	3 cut(s)	138, 468, 565
BmrFI	CCNGG	7 cut(s)	17, 248, 249, 399, 494, 567, 573
BmsI	GCATC	3 cut(s)	125, 712, 1258
BpiI	GAAGAC	1 cut(s)	607
Bpu10I	CCTNAGC	1 cut(s)	472
Bpu14I	TTCGAA	1 cut(s)	9
BpuEI	CTTGAG	3 cut(s)	630, 785, 1017
BpuMI	CCSGG	4 cut(s)	248, 249, 399, 567
BsaAI	YACGTR	1 cut(s)	1300
BsaJI	CCNNGG	3 cut(s)	247, 248, 572
BsaWI	WCCGGW	1 cut(s)	143
Bsc4I	CCNNNNNNNGG	6 cut(s)	572, 573, 595, 1129, 1292, 1324
Bse118I	RCCGGY	3 cut(s)	231, 512, 633
Bse1I	ACTGG	3 cut(s)	911, 941, 1093
Bse3DI	GCAATG	2 cut(s)	358, 863
BseBI	CCWGG	3 cut(s)	17, 494, 573
BseDI	CCNNGG	3 cut(s)	247, 248, 572
BseGI	GGATG	9 cut(s)	36, 72, 172, 351, 703, 981, 1009, 1062, 1214
BseLI	CCNNNNNNNGG	6 cut(s)	572, 573, 595, 1129, 1292, 1324
BseMI	GCAATG	2 cut(s)	358, 863
BseMII	CTCAG	2 cut(s)	825, 1152
BseNI	ACTGG	3 cut(s)	911, 941, 1093
BseSI	GKGCMC	3 cut(s)	677, 878, 893
BseXI	GCAGC	6 cut(s)	187, 350, 359, 463, 1242, 1340
BseYI	CCCAGC	1 cut(s)	1136
Bsh1236I	CGCG	1 cut(s)	942
BshFI	GGCC	5 cut(s)	20, 86, 588, 1141, 1296
BsiHKAI	GWGCWC	4 cut(s)	93, 310, 677, 878
BsiHKCI	CYCGRG	1 cut(s)	247
BsiSI	CCGG	9 cut(s)	144, 232, 248, 399, 486, 513, 567, 634, 1293
BslFI	GGGAC	2 cut(s)	474, 549
BslI	CCNNNNNNNGG	6 cut(s)	572, 573, 595, 1129, 1292, 1324
BsmAI	GTCTC	3 cut(s)	321, 487, 803
BsmFI	GGGAC	2 cut(s)	474, 549
BsmI	GAATGC	1 cut(s)	1253
BsnI	GGCC	5 cut(s)	20, 86, 588, 1141, 1296
BsoBI	CYCGRG	1 cut(s)	247
Bsp119I	TTCGAA	1 cut(s)	9
Bsp1286I	GDGCHC	5 cut(s)	93, 310, 677, 878, 893
Bsp143I	GATC	5 cut(s)	127, 136, 156, 466, 628
BspACI	CCGC	3 cut(s)	40, 585, 1262
BspANI	GGCC	5 cut(s)	20, 86, 588, 1141, 1296
BspCNI	CTCAG	2 cut(s)	824, 1153
BspFNI	CGCG	1 cut(s)	942
BspHI	TCATGA	1 cut(s)	654
BspLI	GGNNCC	3 cut(s)	138, 468, 565
BspMAI	CTGCAG	2 cut(s)	205, 481
BspMI	ACCTGC	1 cut(s)	121
BspPI	GGATC	5 cut(s)	122, 131, 144, 461, 474
BspT104I	TTCGAA	1 cut(s)	9
BsrDI	GCAATG	2 cut(s)	358, 863
BsrFI	RCCGGY	3 cut(s)	231, 512, 633
BsrI	ACTGG	3 cut(s)	911, 941, 1093
BssAI	RCCGGY	3 cut(s)	231, 512, 633
BssECI	CCNNGG	3 cut(s)	247, 248, 572
BssMI	GATC	5 cut(s)	127, 136, 156, 466, 628
Bst2UI	CCWGG	3 cut(s)	17, 494, 573
Bst4CI	ACNGT	4 cut(s)	332, 382, 532, 613
Bst6I	CTCTTC	1 cut(s)	1219
BstBAI	YACGTR	1 cut(s)	1300
BstBI	TTCGAA	1 cut(s)	9
BstC8I	GCNNGC	4 cut(s)	510, 514, 635, 1253
BstDEI	CTNAG	3 cut(s)	472, 811, 1161
BstENI	CCTNNNNNAGG	1 cut(s)	1322
BstF5I	GGATG	9 cut(s)	36, 72, 172, 351, 703, 981, 1009, 1062, 1214
BstFNI	CGCG	1 cut(s)	942
BstHHI	GCGC	3 cut(s)	770, 942, 1176
BstKTI	GATC	5 cut(s)	130, 139, 159, 469, 631
BstMAI	GTCTC	3 cut(s)	321, 487, 803
BstMBI	GATC	5 cut(s)	127, 136, 156, 466, 628
BstMWI	GCNNNNNNNGC	4 cut(s)	765, 916, 1248, 1261
BstNI	CCWGG	3 cut(s)	17, 494, 573
BstNSI	RCATGY	2 cut(s)	51, 1255
BstSCI	CCNGG	7 cut(s)	15, 246, 247, 397, 492, 565, 571
BstSFI	CTRYAG	2 cut(s)	201, 477
BstSLI	GKGCMC	3 cut(s)	677, 878, 893
BstUI	CGCG	1 cut(s)	942
BstV1I	GCAGC	6 cut(s)	187, 350, 359, 463, 1242, 1340
BstV2I	GAAGAC	1 cut(s)	607
BstX2I	RGATCY	2 cut(s)	136, 466
BstYI	RGATCY	2 cut(s)	136, 466
BsuRI	GGCC	5 cut(s)	20, 86, 588, 1141, 1296
BtgZI	GCGATG	1 cut(s)	1257
BtrI	CACGTC	2 cut(s)	672, 913
BtsCI	GGATG	9 cut(s)	36, 72, 172, 351, 703, 981, 1009, 1062, 1214
BtsI	GCAGTG	1 cut(s)	210
BtsIMutI	CAGTG	6 cut(s)	210, 505, 819, 878, 904, 1086
BveI	ACCTGC	1 cut(s)	121
Cac8I	GCNNGC	4 cut(s)	510, 514, 635, 1253
CaiI	CAGNNNCTG	1 cut(s)	1334
CciI	TCATGA	1 cut(s)	654
CfoI	GCGC	3 cut(s)	770, 942, 1176
Cfr10I	RCCGGY	3 cut(s)	231, 512, 633
Cfr13I	GGNCC	5 cut(s)	563, 569, 587, 1139, 1180
Cfr9I	CCCGGG	1 cut(s)	247
CseI	GACGC	3 cut(s)	441, 931, 1003
Csp6I	GTAC	3 cut(s)	229, 577, 902
CviAII	CATG	7 cut(s)	48, 264, 655, 660, 756, 1105, 1252
CviQI	GTAC	3 cut(s)	229, 577, 902
DdeI	CTNAG	3 cut(s)	472, 811, 1161
DpnI	GATC	5 cut(s)	129, 138, 158, 468, 630
DpnII	GATC	5 cut(s)	127, 136, 156, 466, 628
DraIII	CACNNNGTG	1 cut(s)	990
EaeI	YGGCCR	2 cut(s)	84, 1294
Eam1104I	CTCTTC	1 cut(s)	1219
EarI	CTCTTC	1 cut(s)	1219
EciI	GGCGGA	1 cut(s)	29
Ecl136II	GAGCTC	1 cut(s)	308
Eco24I	GRGCYC	1 cut(s)	310
Eco47I	GGWCC	3 cut(s)	563, 569, 1180
Eco53kI	GAGCTC	1 cut(s)	308
Eco57I	CTGAAG	1 cut(s)	854
Eco88I	CYCGRG	1 cut(s)	247
EcoICRI	GAGCTC	1 cut(s)	308
EcoNI	CCTNNNNNAGG	1 cut(s)	1322
EcoRI	GAATTC	1 cut(s)	5
EcoRII	CCWGG	3 cut(s)	15, 492, 571
EcoT22I	ATGCAT	2 cut(s)	1253, 1273
EcoT38I	GRGCYC	1 cut(s)	310
FaeI	CATG	7 cut(s)	51, 267, 658, 663, 759, 1108, 1255
FaqI	GGGAC	2 cut(s)	474, 549
FatI	CATG	7 cut(s)	47, 263, 654, 659, 755, 1104, 1251
FauI	CCCGC	1 cut(s)	1269
FauNDI	CATATG	2 cut(s)	124, 885
FblI	GTMKAC	1 cut(s)	387
Fnu4HI	GCNGC	7 cut(s)	201, 348, 364, 477, 586, 1256, 1329
FokI	GGATG	9 cut(s)	23, 79, 179, 338, 690, 988, 996, 1049, 1221
FriOI	GRGCYC	1 cut(s)	310
Fsp4HI	GCNGC	7 cut(s)	201, 348, 364, 477, 586, 1256, 1329
FspBI	CTAG	1 cut(s)	449
FspI	TGCGCA	1 cut(s)	1175
GlaI	GCGC	3 cut(s)	769, 941, 1175
GluI	GCNGC	7 cut(s)	201, 348, 364, 477, 586, 1256, 1329
GsaI	CCCAGC	1 cut(s)	1140
HaeIII	GGCC	5 cut(s)	20, 86, 588, 1141, 1296
HapII	CCGG	9 cut(s)	144, 232, 248, 399, 486, 513, 567, 634, 1293
HgaI	GACGC	3 cut(s)	441, 931, 1003
HhaI	GCGC	3 cut(s)	770, 942, 1176
Hin1II	CATG	7 cut(s)	51, 267, 658, 663, 759, 1108, 1255
Hin6I	GCGC	3 cut(s)	768, 940, 1174
HinP1I	GCGC	3 cut(s)	768, 940, 1174
HincII	GTYRAC	1 cut(s)	388
HindII	GTYRAC	1 cut(s)	388
HinfI	GANTC	3 cut(s)	256, 643, 809
HpaII	CCGG	9 cut(s)	144, 232, 248, 399, 486, 513, 567, 634, 1293
HphI	GGTGA	4 cut(s)	102, 544, 544, 949
Hpy188I	TCNGA	4 cut(s)	708, 899, 975, 1162
Hpy188III	TCNNGA	4 cut(s)	622, 655, 802, 946
HpyAV	CCTTC	2 cut(s)	742, 1201
HpyCH4III	ACNGT	4 cut(s)	332, 382, 532, 613
HpyCH4IV	ACGT	6 cut(s)	77, 671, 912, 1026, 1196, 1299
HpyF10VI	GCNNNNNNNGC	4 cut(s)	765, 916, 1248, 1261
HpyF3I	CTNAG	3 cut(s)	472, 811, 1161
HpySE526I	ACGT	6 cut(s)	77, 671, 912, 1026, 1196, 1299
Hsp92II	CATG	7 cut(s)	51, 267, 658, 663, 759, 1108, 1255
HspAI	GCGC	3 cut(s)	768, 940, 1174
KroI	GCCGGC	2 cut(s)	512, 633
KroNI	GCCGGC	2 cut(s)	514, 635
Kzo9I	GATC	5 cut(s)	127, 136, 156, 466, 628
LmnI	GCTCC	1 cut(s)	305
Lsp1109I	GCAGC	6 cut(s)	187, 350, 359, 463, 1242, 1340
LweI	GCATC	3 cut(s)	125, 712, 1258
MaeI	CTAG	1 cut(s)	449
MaeII	ACGT	6 cut(s)	77, 671, 912, 1026, 1196, 1299
MaeIII	GTNAC	6 cut(s)	205, 667, 779, 806, 955, 1027
MalI	GATC	5 cut(s)	129, 138, 158, 468, 630
MboI	GATC	5 cut(s)	127, 136, 156, 466, 628
MboII	GAAGA	2 cut(s)	607, 1236
MflI	RGATCY	2 cut(s)	136, 466
MhlI	GDGCHC	5 cut(s)	93, 310, 677, 878, 893
MluCI	AATT	6 cut(s)	5, 338, 427, 793, 856, 1303
MlyI	GAGTC	3 cut(s)	250, 637, 803
MmeI	TCCRAC	3 cut(s)	114, 164, 401
MnlI	CCTC	7 cut(s)	53, 629, 706, 1070, 1156, 1230, 1342
Mph1103I	ATGCAT	2 cut(s)	1253, 1273
MreI	CGCCGGCG	1 cut(s)	633
MroNI	GCCGGC	2 cut(s)	512, 633
MroXI	GAANNNNTTC	2 cut(s)	218, 1190
MseI	TTAA	1 cut(s)	1127
MslI	CAYNNNNRTG	2 cut(s)	268, 1091
MspI	CCGG	9 cut(s)	144, 232, 248, 399, 486, 513, 567, 634, 1293
MspR9I	CCNGG	7 cut(s)	17, 248, 249, 399, 494, 567, 573
Mva1269I	GAATGC	1 cut(s)	1253
MvaI	CCWGG	3 cut(s)	17, 494, 573
MvnI	CGCG	1 cut(s)	942
MwoI	GCNNNNNNNGC	4 cut(s)	765, 916, 1248, 1261
NaeI	GCCGGC	2 cut(s)	514, 635
NciI	CCSGG	4 cut(s)	248, 249, 399, 567
NdeI	CATATG	2 cut(s)	124, 885
NdeII	GATC	5 cut(s)	127, 136, 156, 466, 628
NgoMIV	GCCGGC	2 cut(s)	512, 633
NlaIII	CATG	7 cut(s)	51, 267, 658, 663, 759, 1108, 1255
NlaIV	GGNNCC	3 cut(s)	138, 468, 565
NmuCI	GTSAC	6 cut(s)	205, 667, 779, 806, 955, 1027
NsbI	TGCGCA	1 cut(s)	1175
NsiI	ATGCAT	2 cut(s)	1253, 1273
NspI	RCATGY	2 cut(s)	51, 1255
NspV	TTCGAA	1 cut(s)	9
PaeI	GCATGC	1 cut(s)	1255
PagI	TCATGA	1 cut(s)	654
PaqCI	CACCTGC	1 cut(s)	121
PciI	ACATGT	1 cut(s)	47
PctI	GAATGC	1 cut(s)	1253
PdiI	GCCGGC	2 cut(s)	514, 635
PdmI	GAANNNNTTC	2 cut(s)	218, 1190
PfoI	TCCNGGA	2 cut(s)	397, 565
PkrI	GCNGC	7 cut(s)	202, 349, 365, 478, 587, 1257, 1330
PleI	GAGTC	3 cut(s)	250, 637, 803
PpsI	GAGTC	3 cut(s)	250, 637, 803
Ppu21I	YACGTR	1 cut(s)	1300
PscI	ACATGT	1 cut(s)	47
PshBI	ATTAAT	1 cut(s)	1127
Psp124BI	GAGCTC	1 cut(s)	310
Psp6I	CCWGG	3 cut(s)	15, 492, 571
PspFI	CCCAGC	1 cut(s)	1136
PspGI	CCWGG	3 cut(s)	15, 492, 571
PspN4I	GGNNCC	3 cut(s)	138, 468, 565
PspPI	GGNCC	5 cut(s)	563, 569, 587, 1139, 1180
PstI	CTGCAG	2 cut(s)	205, 481
PstNI	CAGNNNCTG	1 cut(s)	1334
PsuI	RGATCY	2 cut(s)	136, 466
RsaI	GTAC	3 cut(s)	230, 578, 903
RsaNI	GTAC	3 cut(s)	229, 577, 902
RseI	CAYNNNNRTG	2 cut(s)	268, 1091
SacI	GAGCTC	1 cut(s)	310
SalI	GTCGAC	1 cut(s)	386
SaqAI	TTAA	1 cut(s)	1127
SatI	GCNGC	7 cut(s)	201, 348, 364, 477, 586, 1256, 1329
Sau3AI	GATC	5 cut(s)	127, 136, 156, 466, 628
Sau96I	GGNCC	5 cut(s)	563, 569, 587, 1139, 1180
SchI	GAGTC	3 cut(s)	250, 637, 803
ScrFI	CCNGG	7 cut(s)	17, 248, 249, 399, 494, 567, 573
SduI	GDGCHC	5 cut(s)	93, 310, 677, 878, 893
SfaNI	GCATC	3 cut(s)	125, 712, 1258
SfcI	CTRYAG	2 cut(s)	201, 477
SfuI	TTCGAA	1 cut(s)	9
SgrAI	CRCCGGYG	1 cut(s)	633
SinI	GGWCC	3 cut(s)	563, 569, 1180
SmaI	CCCGGG	1 cut(s)	249
SmiMI	CAYNNNNRTG	2 cut(s)	268, 1091
SmlI	CTYRAG	3 cut(s)	645, 800, 1032
SmoI	CTYRAG	3 cut(s)	645, 800, 1032
SphI	GCATGC	1 cut(s)	1255
Sse9I	AATT	6 cut(s)	5, 338, 427, 793, 856, 1303
SsiI	CCGC	3 cut(s)	40, 585, 1262
SspI	AATATT	1 cut(s)	1153
SspMI	CTAG	1 cut(s)	449
SstI	GAGCTC	1 cut(s)	310
StyD4I	CCNGG	7 cut(s)	15, 246, 247, 397, 492, 565, 571
TaaI	ACNGT	4 cut(s)	332, 382, 532, 613
TaiI	ACGT	6 cut(s)	80, 674, 915, 1029, 1199, 1302
TaqI	TCGA	3 cut(s)	9, 387, 1222
TasI	AATT	6 cut(s)	5, 338, 427, 793, 856, 1303
TatI	WGTACW	1 cut(s)	901
TauI	GCSGC	1 cut(s)	588
Tru1I	TTAA	1 cut(s)	1127
Tru9I	TTAA	1 cut(s)	1127
TscAI	CASTG	6 cut(s)	210, 505, 819, 878, 911, 1093
TseFI	GTSAC	6 cut(s)	205, 667, 779, 806, 955, 1027
TseI	GCWGC	6 cut(s)	200, 347, 363, 476, 1255, 1328
Tsp45I	GTSAC	6 cut(s)	205, 667, 779, 806, 955, 1027
TspDTI	ATGAA	6 cut(s)	83, 227, 756, 992, 1121, 1260
TspGWI	ACGGA	2 cut(s)	120, 1066
TspMI	CCCGGG	1 cut(s)	247
TspRI	CASTG	6 cut(s)	210, 505, 819, 878, 911, 1093
VneI	GTGCAC	2 cut(s)	673, 874
VpaK11BI	GGWCC	3 cut(s)	563, 569, 1180
VspI	ATTAAT	1 cut(s)	1127
XagI	CCTNNNNNAGG	1 cut(s)	1322
XapI	RAATTY	3 cut(s)	5, 338, 1303
XceI	RCATGY	2 cut(s)	51, 1255
XmaI	CCCGGG	1 cut(s)	247
XmiI	GTMKAC	1 cut(s)	387
XmnI	GAANNNNTTC	2 cut(s)	218, 1190
XspI	CTAG	1 cut(s)	449
Zsp2I	ATGCAT	2 cut(s)	1253, 1273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.