COBRA-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15630 AT5G15630 AT5G15630 AT5G15630 AT5G15630 |
| fragaria_vesca | FvH4_5g13560 FvH4_6g46470 FvH4_6g46470 |
| malus_domestica | MD06G1203800.v1.1 MD09G1072900.v1.1 MD14G1214900.v1.1 MD17G1064300.v1.1 |
| prunus_persica | Prupe.3G250300_v2.0.a1 Prupe.5G207900_v2.0.a1 Prupe.5G207900_v2.0.a1 |
| pyrus_communis | pycom06g18200 pycom17g06440 |
| rosa_chinensis | RchiOBHm_Chr2g0165021 RchiOBHm_Chr7g0183391 |
| rosa_laevigata | RLG00000005050 RLG00000021507 |
| rosa_multiflora | Rmu_sc0000951.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00086110 Rroxscaffold_3G00270480 |
| rosa_rugosa | Rorug02G0512400 Rorug02G0512400 Rorug06G0457600 Rorug06G0457700 |
| rosa_samantha | Rh2AG580400 Rh2BG591700 Rh2CG562200 Rh2DG601800 Rh7AG058800 Rh7BG058800 Rh7CG060400 Rh7DG058500 |
| rosa_wichuraiana | Rw2G048180 Rw7G004840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 731 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 96, 1063 |
| AccII | CGCG | 1 cut(s) | 233 |
| AciI | CCGC | 3 cut(s) | 231, 233, 375 |
| AclI | AACGTT | 1 cut(s) | 1086 |
| AclWI | GGATC | 4 cut(s) | 56, 65, 78, 395 |
| AcoI | YGGCCR | 1 cut(s) | 444 |
| AcsI | RAATTY | 2 cut(s) | 750, 1098 |
| AcuI | CTGAAG | 1 cut(s) | 390 |
| AfaI | GTAC | 4 cut(s) | 451, 512, 610, 869 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 96, 506, 721, 1063 |
| AflII | CTTAAG | 1 cut(s) | 1106 |
| AflIII | ACRYGT | 1 cut(s) | 819 |
| AgsI | TTSAA | 6 cut(s) | 277, 456, 1042, 1051, 1135, 1171 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 106 |
| AjnI | CCWGG | 4 cut(s) | 181, 476, 499, 505 |
| AleI | CACNNNNGTG | 1 cut(s) | 317 |
| AluBI | AGCT | 9 cut(s) | 20, 53, 410, 430, 584, 622, 978, 1240, 1289 |
| AluI | AGCT | 9 cut(s) | 20, 53, 410, 430, 584, 622, 978, 1240, 1289 |
| Alw21I | GWGCWC | 1 cut(s) | 244 |
| Alw26I | GTCTC | 1 cut(s) | 421 |
| AlwI | GGATC | 4 cut(s) | 56, 65, 78, 395 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 413, 625 |
| AoxI | GGCC | 5 cut(s) | 394, 420, 444, 627, 1073 |
| ApeKI | GCWGC | 2 cut(s) | 50, 53 |
| ApoI | RAATTY | 2 cut(s) | 750, 1098 |
| AseI | ATTAAT | 2 cut(s) | 1061, 1271 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1046, 1101 |
| AspS9I | GGNCC | 6 cut(s) | 228, 394, 497, 503, 628, 1073 |
| AsuC2I | CCSGG | 3 cut(s) | 333, 827, 1072 |
| AsuHPI | GGTGA | 3 cut(s) | 272, 549, 1187 |
| AvaII | GGWCC | 3 cut(s) | 228, 497, 503 |
| BaeGI | GKGCMC | 1 cut(s) | 827 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 502, 535 |
| BamHI | GGATCC | 1 cut(s) | 70 |
| BanII | GRGCYC | 1 cut(s) | 182 |
| Bbv12I | GWGCWC | 1 cut(s) | 244 |
| BbvI | GCAGC | 2 cut(s) | 40, 62 |
| BccI | CCATC | 4 cut(s) | 90, 116, 703, 1239 |
| BciT130I | CCWGG | 4 cut(s) | 183, 478, 501, 507 |
| BcnI | CCSGG | 3 cut(s) | 333, 827, 1072 |
| BcoDI | GTCTC | 1 cut(s) | 421 |
| BfaI | CTAG | 1 cut(s) | 494 |
| BfrI | CTTAAG | 1 cut(s) | 1106 |
| BisI | GCNGC | 2 cut(s) | 51, 54 |
| BlsI | GCNGC | 2 cut(s) | 52, 55 |
| BmcAI | AGTACT | 1 cut(s) | 869 |
| Bme1390I | CCNGG | 7 cut(s) | 183, 333, 478, 501, 507, 827, 1072 |
| Bme18I | GGWCC | 3 cut(s) | 228, 497, 503 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 106 |
| BmgT120I | GGNCC | 6 cut(s) | 228, 394, 497, 503, 628, 1073 |
| BmiI | GGNNCC | 2 cut(s) | 72, 395 |
| BmrFI | CCNGG | 7 cut(s) | 183, 333, 478, 501, 507, 827, 1072 |
| BmsI | GCATC | 1 cut(s) | 1179 |
| BoxI | GACNNNNGTC | 1 cut(s) | 932 |
| BpuEI | CTTGAG | 1 cut(s) | 564 |
| BpuMI | CCSGG | 3 cut(s) | 333, 827, 1072 |
| BsaJI | CCNNGG | 6 cut(s) | 66, 181, 182, 231, 476, 506 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 96, 506, 721, 1063 |
| Bse118I | RCCGGY | 1 cut(s) | 446 |
| Bse1I | ACTGG | 3 cut(s) | 845, 875, 1027 |
| Bse3DI | GCAATG | 1 cut(s) | 812 |
| BseBI | CCWGG | 4 cut(s) | 183, 478, 501, 507 |
| BseDI | CCNNGG | 6 cut(s) | 66, 181, 182, 231, 476, 506 |
| BseGI | GGATG | 1 cut(s) | 915 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 96, 506, 721, 1063 |
| BseMI | GCAATG | 1 cut(s) | 812 |
| BseMII | CTCAG | 3 cut(s) | 422, 746, 1266 |
| BseNI | ACTGG | 3 cut(s) | 845, 875, 1027 |
| BseSI | GKGCMC | 1 cut(s) | 827 |
| BseXI | GCAGC | 2 cut(s) | 40, 62 |
| Bsh1236I | CGCG | 1 cut(s) | 233 |
| BshFI | GGCC | 5 cut(s) | 396, 422, 446, 629, 1075 |
| BsiHKAI | GWGCWC | 1 cut(s) | 244 |
| BsiSI | CCGG | 4 cut(s) | 333, 447, 827, 1071 |
| BslFI | GGGAC | 1 cut(s) | 113 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 96, 506, 721, 1063 |
| BsmAI | GTCTC | 1 cut(s) | 421 |
| BsmFI | GGGAC | 1 cut(s) | 113 |
| BsnI | GGCC | 5 cut(s) | 396, 422, 446, 629, 1075 |
| Bsp1286I | GDGCHC | 3 cut(s) | 182, 244, 827 |
| Bsp143I | GATC | 4 cut(s) | 61, 70, 400, 562 |
| BspACI | CCGC | 3 cut(s) | 231, 233, 375 |
| BspANI | GGCC | 5 cut(s) | 396, 422, 446, 629, 1075 |
| BspCNI | CTCAG | 3 cut(s) | 423, 747, 1265 |
| BspFNI | CGCG | 1 cut(s) | 233 |
| BspHI | TCATGA | 1 cut(s) | 588 |
| BspLI | GGNNCC | 2 cut(s) | 72, 395 |
| BspPI | GGATC | 4 cut(s) | 56, 65, 78, 395 |
| BspTI | CTTAAG | 1 cut(s) | 1106 |
| BsrDI | GCAATG | 1 cut(s) | 812 |
| BsrFI | RCCGGY | 1 cut(s) | 446 |
| BsrI | ACTGG | 3 cut(s) | 845, 875, 1027 |
| BssAI | RCCGGY | 1 cut(s) | 446 |
| BssECI | CCNNGG | 6 cut(s) | 66, 181, 182, 231, 476, 506 |
| BssMI | GATC | 4 cut(s) | 61, 70, 400, 562 |
| BssT1I | CCWWGG | 1 cut(s) | 66 |
| Bst2UI | CCWGG | 4 cut(s) | 183, 478, 501, 507 |
| Bst4CI | ACNGT | 6 cut(s) | 139, 316, 365, 466, 547, 728 |
| BstAFI | CTTAAG | 1 cut(s) | 1106 |
| BstC8I | GCNNGC | 1 cut(s) | 338 |
| BstDEI | CTNAG | 3 cut(s) | 431, 755, 1252 |
| BstDSI | CCRYGG | 1 cut(s) | 231 |
| BstF5I | GGATG | 1 cut(s) | 915 |
| BstFNI | CGCG | 1 cut(s) | 233 |
| BstKTI | GATC | 4 cut(s) | 64, 73, 403, 565 |
| BstMAI | GTCTC | 1 cut(s) | 421 |
| BstMBI | GATC | 4 cut(s) | 61, 70, 400, 562 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 239 |
| BstNI | CCWGG | 4 cut(s) | 183, 478, 501, 507 |
| BstNSI | RCATGY | 2 cut(s) | 823, 848 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 932 |
| BstSCI | CCNGG | 7 cut(s) | 181, 331, 476, 499, 505, 825, 1070 |
| BstSLI | GKGCMC | 1 cut(s) | 827 |
| BstUI | CGCG | 1 cut(s) | 233 |
| BstV1I | GCAGC | 2 cut(s) | 40, 62 |
| BstX2I | RGATCY | 2 cut(s) | 70, 400 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 319 |
| BstYI | RGATCY | 2 cut(s) | 70, 400 |
| BsuRI | GGCC | 5 cut(s) | 396, 422, 446, 629, 1075 |
| BtgI | CCRYGG | 1 cut(s) | 231 |
| BtsCI | GGATG | 1 cut(s) | 915 |
| BtsIMutI | CAGTG | 2 cut(s) | 838, 1020 |
| Cac8I | GCNNGC | 1 cut(s) | 338 |
| CaiI | CAGNNNCTG | 2 cut(s) | 413, 625 |
| CciI | TCATGA | 1 cut(s) | 588 |
| Cfr10I | RCCGGY | 1 cut(s) | 446 |
| Cfr13I | GGNCC | 6 cut(s) | 228, 394, 497, 503, 628, 1073 |
| Cfr42I | CCGCGG | 1 cut(s) | 234 |
| CsiI | ACCWGGT | 1 cut(s) | 499 |
| Csp6I | GTAC | 4 cut(s) | 450, 511, 609, 868 |
| CviAII | CATG | 5 cut(s) | 204, 589, 760, 820, 845 |
| CviQI | GTAC | 4 cut(s) | 450, 511, 609, 868 |
| DdeI | CTNAG | 3 cut(s) | 431, 755, 1252 |
| DpnI | GATC | 4 cut(s) | 63, 72, 402, 564 |
| DpnII | GATC | 4 cut(s) | 61, 70, 400, 562 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 731 |
| DriI | GACNNNNNGTC | 1 cut(s) | 106 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 731 |
| EaeI | YGGCCR | 1 cut(s) | 444 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 106 |
| EciI | GGCGGA | 1 cut(s) | 390 |
| Eco130I | CCWWGG | 1 cut(s) | 66 |
| Eco24I | GRGCYC | 1 cut(s) | 182 |
| Eco47I | GGWCC | 3 cut(s) | 228, 497, 503 |
| Eco57I | CTGAAG | 1 cut(s) | 390 |
| EcoRII | CCWGG | 4 cut(s) | 181, 476, 499, 505 |
| EcoT14I | CCWWGG | 1 cut(s) | 66 |
| EcoT38I | GRGCYC | 1 cut(s) | 182 |
| ErhI | CCWWGG | 1 cut(s) | 66 |
| FaeI | CATG | 5 cut(s) | 207, 592, 763, 823, 848 |
| FaqI | GGGAC | 1 cut(s) | 113 |
| FatI | CATG | 5 cut(s) | 203, 588, 759, 819, 844 |
| FauNDI | CATATG | 1 cut(s) | 46 |
| Fnu4HI | GCNGC | 2 cut(s) | 51, 54 |
| FokI | GGATG | 1 cut(s) | 922 |
| FriOI | GRGCYC | 1 cut(s) | 182 |
| Fsp4HI | GCNGC | 2 cut(s) | 51, 54 |
| FspBI | CTAG | 1 cut(s) | 494 |
| GluI | GCNGC | 2 cut(s) | 51, 54 |
| HaeIII | GGCC | 5 cut(s) | 396, 422, 446, 629, 1075 |
| HapII | CCGG | 4 cut(s) | 333, 447, 827, 1071 |
| Hin1II | CATG | 5 cut(s) | 207, 592, 763, 823, 848 |
| HincII | GTYRAC | 1 cut(s) | 772 |
| HindII | GTYRAC | 1 cut(s) | 772 |
| HinfI | GANTC | 4 cut(s) | 577, 835, 928, 1007 |
| HpaI | GTTAAC | 1 cut(s) | 772 |
| HpaII | CCGG | 4 cut(s) | 333, 447, 827, 1071 |
| HphI | GGTGA | 3 cut(s) | 272, 549, 1187 |
| Hpy166II | GTNNAC | 5 cut(s) | 189, 322, 513, 772, 1165 |
| Hpy188I | TCNGA | 3 cut(s) | 756, 909, 1096 |
| Hpy188III | TCNNGA | 1 cut(s) | 589 |
| Hpy8I | GTNNAC | 5 cut(s) | 189, 322, 513, 772, 1165 |
| Hpy99I | CGWCG | 2 cut(s) | 570, 573 |
| HpyAV | CCTTC | 5 cut(s) | 38, 414, 433, 874, 1105 |
| HpyCH4III | ACNGT | 6 cut(s) | 139, 316, 365, 466, 547, 728 |
| HpyCH4IV | ACGT | 1 cut(s) | 1086 |
| HpyCH4V | TGCA | 6 cut(s) | 50, 56, 300, 369, 805, 810 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 239 |
| HpyF3I | CTNAG | 3 cut(s) | 431, 755, 1252 |
| HpySE526I | ACGT | 1 cut(s) | 1086 |
| Hsp92II | CATG | 5 cut(s) | 207, 592, 763, 823, 848 |
| KspAI | GTTAAC | 1 cut(s) | 772 |
| KspI | CCGCGG | 1 cut(s) | 234 |
| Kzo9I | GATC | 4 cut(s) | 61, 70, 400, 562 |
| LmnI | GCTCC | 2 cut(s) | 239, 272 |
| Lsp1109I | GCAGC | 2 cut(s) | 40, 62 |
| LweI | GCATC | 1 cut(s) | 1179 |
| MabI | ACCWGGT | 1 cut(s) | 499 |
| MaeI | CTAG | 1 cut(s) | 494 |
| MaeII | ACGT | 1 cut(s) | 1086 |
| MaeIII | GTNAC | 6 cut(s) | 139, 260, 555, 601, 889, 961 |
| MalI | GATC | 4 cut(s) | 63, 72, 402, 564 |
| MboI | GATC | 4 cut(s) | 61, 70, 400, 562 |
| MboII | GAAGA | 1 cut(s) | 1094 |
| MfeI | CAATTG | 1 cut(s) | 681 |
| MflI | RGATCY | 2 cut(s) | 70, 400 |
| MhlI | GDGCHC | 3 cut(s) | 182, 244, 827 |
| MluCI | AATT | 7 cut(s) | 681, 750, 856, 1058, 1098, 1222, 1272 |
| MlyI | GAGTC | 3 cut(s) | 571, 922, 1016 |
| MmeI | TCCRAC | 3 cut(s) | 179, 418, 1074 |
| MnlI | CCTC | 5 cut(s) | 300, 549, 1002, 1132, 1164 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1046, 1101 |
| MseI | TTAA | 5 cut(s) | 771, 900, 1061, 1107, 1271 |
| MslI | CAYNNNNRTG | 3 cut(s) | 317, 843, 1025 |
| MspA1I | CMGCKG | 3 cut(s) | 53, 233, 430 |
| MspCI | CTTAAG | 1 cut(s) | 1106 |
| MspI | CCGG | 4 cut(s) | 333, 447, 827, 1071 |
| MspR9I | CCNGG | 7 cut(s) | 183, 333, 478, 501, 507, 827, 1072 |
| MunI | CAATTG | 1 cut(s) | 681 |
| MvaI | CCWGG | 4 cut(s) | 183, 478, 501, 507 |
| MvnI | CGCG | 1 cut(s) | 233 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 239 |
| NciI | CCSGG | 3 cut(s) | 333, 827, 1072 |
| NdeI | CATATG | 1 cut(s) | 46 |
| NdeII | GATC | 4 cut(s) | 61, 70, 400, 562 |
| NlaIII | CATG | 5 cut(s) | 207, 592, 763, 823, 848 |
| NlaIV | GGNNCC | 2 cut(s) | 72, 395 |
| NmeAIII | GCCGAG | 1 cut(s) | 398 |
| NmuCI | GTSAC | 4 cut(s) | 260, 555, 601, 961 |
| NspI | RCATGY | 2 cut(s) | 823, 848 |
| OliI | CACNNNNGTG | 1 cut(s) | 317 |
| PagI | TCATGA | 1 cut(s) | 588 |
| PasI | CCCWGGG | 1 cut(s) | 182 |
| PciI | ACATGT | 1 cut(s) | 819 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1046, 1101 |
| PfeI | GAWTC | 1 cut(s) | 835 |
| PflFI | GACNNNGTC | 1 cut(s) | 501 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 96, 1063 |
| PkrI | GCNGC | 2 cut(s) | 52, 55 |
| PleI | GAGTC | 3 cut(s) | 571, 922, 1015 |
| PpsI | GAGTC | 3 cut(s) | 571, 922, 1015 |
| PscI | ACATGT | 1 cut(s) | 819 |
| PshAI | GACNNNNGTC | 1 cut(s) | 932 |
| PshBI | ATTAAT | 2 cut(s) | 1061, 1271 |
| Psp1406I | AACGTT | 1 cut(s) | 1086 |
| Psp6I | CCWGG | 4 cut(s) | 181, 476, 499, 505 |
| PspGI | CCWGG | 4 cut(s) | 181, 476, 499, 505 |
| PspN4I | GGNNCC | 2 cut(s) | 72, 395 |
| PspPI | GGNCC | 6 cut(s) | 228, 394, 497, 503, 628, 1073 |
| PstNI | CAGNNNCTG | 2 cut(s) | 413, 625 |
| PsuI | RGATCY | 2 cut(s) | 70, 400 |
| PsyI | GACNNNGTC | 1 cut(s) | 501 |
| PvuII | CAGCTG | 2 cut(s) | 53, 430 |
| RsaI | GTAC | 4 cut(s) | 451, 512, 610, 869 |
| RsaNI | GTAC | 4 cut(s) | 450, 511, 609, 868 |
| RseI | CAYNNNNRTG | 3 cut(s) | 317, 843, 1025 |
| SacII | CCGCGG | 1 cut(s) | 234 |
| SaqAI | TTAA | 5 cut(s) | 771, 900, 1061, 1107, 1271 |
| SatI | GCNGC | 2 cut(s) | 51, 54 |
| Sau3AI | GATC | 4 cut(s) | 61, 70, 400, 562 |
| Sau96I | GGNCC | 6 cut(s) | 228, 394, 497, 503, 628, 1073 |
| ScaI | AGTACT | 1 cut(s) | 869 |
| SchI | GAGTC | 3 cut(s) | 571, 922, 1016 |
| ScrFI | CCNGG | 7 cut(s) | 183, 333, 478, 501, 507, 827, 1072 |
| SduI | GDGCHC | 3 cut(s) | 182, 244, 827 |
| SexAI | ACCWGGT | 1 cut(s) | 499 |
| SfaNI | GCATC | 1 cut(s) | 1179 |
| Sfr303I | CCGCGG | 1 cut(s) | 234 |
| SgrBI | CCGCGG | 1 cut(s) | 234 |
| SinI | GGWCC | 3 cut(s) | 228, 497, 503 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 317, 843, 1025 |
| SmlI | CTYRAG | 2 cut(s) | 579, 1106 |
| SmoI | CTYRAG | 2 cut(s) | 579, 1106 |
| Sse9I | AATT | 7 cut(s) | 681, 750, 856, 1058, 1098, 1222, 1272 |
| SsiI | CCGC | 3 cut(s) | 231, 233, 375 |
| SspMI | CTAG | 1 cut(s) | 494 |
| StyD4I | CCNGG | 7 cut(s) | 181, 331, 476, 499, 505, 825, 1070 |
| StyI | CCWWGG | 1 cut(s) | 66 |
| TaaI | ACNGT | 6 cut(s) | 139, 316, 365, 466, 547, 728 |
| TaiI | ACGT | 1 cut(s) | 1089 |
| TaqI | TCGA | 2 cut(s) | 746, 1156 |
| TasI | AATT | 7 cut(s) | 681, 750, 856, 1058, 1098, 1222, 1272 |
| TatI | WGTACW | 2 cut(s) | 608, 867 |
| TfiI | GAWTC | 1 cut(s) | 835 |
| Tru1I | TTAA | 5 cut(s) | 771, 900, 1061, 1107, 1271 |
| Tru9I | TTAA | 5 cut(s) | 771, 900, 1061, 1107, 1271 |
| TscAI | CASTG | 2 cut(s) | 845, 1027 |
| TseFI | GTSAC | 4 cut(s) | 260, 555, 601, 961 |
| TseI | GCWGC | 2 cut(s) | 50, 53 |
| Tsp45I | GTSAC | 4 cut(s) | 260, 555, 601, 961 |
| TspDTI | ATGAA | 3 cut(s) | 33, 926, 1236 |
| TspRI | CASTG | 2 cut(s) | 845, 1027 |
| Tth111I | GACNNNGTC | 1 cut(s) | 501 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 96, 1063 |
| Vha464I | CTTAAG | 1 cut(s) | 1106 |
| VpaK11BI | GGWCC | 3 cut(s) | 228, 497, 503 |
| VspI | ATTAAT | 2 cut(s) | 1061, 1271 |
| XapI | RAATTY | 2 cut(s) | 750, 1098 |
| XceI | RCATGY | 2 cut(s) | 823, 848 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 434 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1046, 1101 |
| XspI | CTAG | 1 cut(s) | 494 |
| ZrmI | AGTACT | 1 cut(s) | 869 |