Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0008368

Physical Location & Seq

Genomic Coordinates Reverse (-)

18026791 .. 18033492

Gene Structure 6702 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1127600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGAGTTTTGGGGGTTTTCTGGACAACAGTACCGGCAGTGGTGTCGGTGCAAGAATCGTGGCTGATATTCCGTACACAAACAACAGCAACAACATGCCCTCCAGTGCAATAGCTCAGCCACGCCTTGTCACTCAGTCTCTCACTAAATCCATGTTCAACTCTCCGGGACTCTCACTTGCCCTAACAAATGTGGATGGGCAAGGAGATGTGACGAGAGTGGCTGAGAATTATGAGGCAAACAACGGCGGGAGAAGGAGCAGAGAGGAAGAGCACGAGAGCAGATCTGGGAGTGACAACATGGATGGTGCTTCTGGGGACGATCAAGATGCCGCTGACAACCACCACCCTCGTAAGAAGAAGCGTTACCACCGACACACCCCTCAGCAAATCCAAGAACTTGAAGCGCTGTTCAAAGAGTGCCCTCATCCTGATGAGAAGCAAAGATTAGAGCTCAGCAGAAGGCTTAACTTGGAGACTAGACAAGTCAAATTCTGGTTCCAAAATCGCCGAACCCAAATGAAGACGCAACTGGAACGCCATGAGAACTCGTTGCTGAGGCAAGAGAACGATAAGCTCCGAGCGGAGAACATGTCGATTCGTGAGGCTATGAGGAACCCAATTTGCTCAAACTGTGGCGGTCCGGCAATTATTGGAGATATATCACTAGAAGAGCAGCACCTCAGGATCGAAAATGCTCGATTGAAGGATGATTTGGACCGAGTTTGTGCACTCGCCGGAAAGTTTCTAGGCCGACCCATCTCATCCCTGGCTGCATCCATGGGGCCTCCGCTCCCGAGCTCCACTTTGGAGCTCGGAGTTGGGAGCAATGGGTTTGGTGGGATGAGCAATGTGGCTACATCGATGTCCATGGGAAATGATTTTGGAGGTGGGATTGGGAGTGCTATGTCAGTTGTGTCTCATGGCAGGCCTAGTGTGACGGGGCTAGACCGGTCGATGGAAAGATCAATCTTTCTAGAGCTTGCTTTGGCTGCCATGGATGAATTGGTTAAGATGGCTCAGACGGATGAGCCCCTTTGGCTTAGGAGCTTAGAAGGTGGAAGGGAGGTTTTGAACCATGAGGAATACATGAGAAATTTCACTCCTTGCATTGGATTGAAACCGAATGGTTTCGTCTCCGAGGCTTCTAGGGAGTCTGGAACGGTCATCATCAACAGCTTAACTCTTGTTGAAACTTTGATGGATTCGAATCGATGGTTGGAGATGTTTCCTGGTGTGCTTGCAAGAACCTCAACCACTGATGTGATTTCCAGTGGCATGGGAGGAACTAGAAATGGTGCACTTCAACTGATGCACGCTGAACTGCAAGTCCTATCGCCTTTGGTTCCGGTTCGTGAGGTCAATTTCCTCCGTTTCTGCAAGCAACACGCAGAGGGCGTGTGGGCTGTGGTTGACGTGTCAGTTGACGCCATCCGTGACACCACCGGGGTACCGACATTTATGAACTGTAGGAGGCTTCCTTCTGGCTGTGTTGTGCAAGACATGCCCAATGGGTACTCTAAGGTTACTTGGGTTGAGCATGCAGAGTACGATGAGAGCCAAGTCCACCACCTATACCGACCCTTGTTAAGTTCCGGCATGGGCTTCGGCGCCCAACGGTGGGTTGCCACCCTTCAACGCCAATCCGAGTGCCAGGCCATTCTCATGTCCTCCTGCGTCACCTCCCGCGACCACACTGCCATCACTGCCAGCGGAAGGAGGAGCATGCTGAAGCTGGCGCAGCGGATGACGGACAACTTCTGTGCCGGGGTATGCGCATCGACGGTGCACAAATGGACCAAGCTGAACGCCGGGAATGTCGACGAGGACGTCAGGGTCATGACTCGGGAGAGCCTAGACGACCCTGGAGAGCCGCCCGGTGTCGTGCTCAGCGCTGCCACTTCGGTCTGGCTGCCAGTCTCCCCACAGAGGCTATTTGATTTCTTGCGCGATGAGCGACTAAGGAGCGAGTGGGACATACTCTCCAACGGTGGGCCTATGCAGGAGATGGCCCACATCGCCAAGGGCCAGGACCCCGGCAACTGCGTCTCCCTCCTGCGCGCCAGAGCAAACGCAAACCAAGGTAGCATGCTGATCCTACAGGAGACATGCATAGACGCGGCAGGGTCGCTTGTTGTGTACGCGCCTGTTGACATTCCGGCCATGCACGTGGTTATGAACGGCGGGGACTCCGCCTATGTGGCGCTCCTGCCATCCGGGTTCGCAATCGTACCTGATGGCCCAGGCTCGCGCGGGCCCATGTTTGGCAAAGGCGGCAGTCACGGCAGCGGCAACAGTGGCGGTGGCGTTGACGACGGTGGCCATAGAGTGAGCGGGTCCCTCCTGACGATGACGTTTCAGATCCTGGTGAACAGCCTGCCGACAGCGAAGCTGACCGTGGAGTCGGTGGAGACGGTGAACCACCTCATATCGTGTACCGTCCAGAAGATCAAGGCCGCCCTCCATTGTGAGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042335 GO:0042545 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0045229 GO:0045595 GO:0045596 GO:0048364 GO:0048367 GO:0048437 GO:0048468 GO:0048469 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090627 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

825

Amino Acids

89.56

Weight (kDa)

6.0

Isoelectric Point (pI)

46.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	119 - 174	1.7e-19	Homeodomain
START	PF01852	326 - 549	2.3e-52	START domain
PDF2_C	PF25797	569 - 822	1.3e-101	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61150 AT4G00730 AT4G00730
fragaria_vesca	FvH4_7g13350 FvH4_7g13350
malus_domestica	MD01G1050200.v1.1 MD07G1127600.v1.1
prunus_persica	Prupe.2G156900_v2.0.a1 Prupe.2G156900_v2.0.a1
pyrus_communis	pycom01g07490 pycom07g12270
rosa_chinensis	RchiOBHm_Chr1g0352671
rosa_laevigata	RLG00000028322
rosa_multiflora	Rmu_co8513183.1_g000001 Rmu_sc0005118.1_g000003
rosa_roxburghii	Rroxscaffold_4G00302500
rosa_rugosa	Rorug01G0230700 Rorug01G0230800 Rorug01G0230900
rosa_samantha	Rh1AG243900 Rh1BG214500 Rh1CG227900 Rh1DG240600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	1826, 1832, 2398
AatII	GACGTC	1 cut(s)	1830
Acc16I	TGCGCA	1 cut(s)	1774
Acc65I	GGTACC	1 cut(s)	1447
AccB1I	GGYRCC	2 cut(s)	1447, 1607
AccBSI	CCGCTC	3 cut(s)	581, 790, 2331
AccI	GTMKAC	1 cut(s)	1818
AccII	CGCG	7 cut(s)	1686, 1947, 2058, 2117, 2141, 2248, 2250
AclWI	GGATC	3 cut(s)	692, 2086, 2353
AcoI	YGGCCR	2 cut(s)	2157, 2317
AcsI	RAATTY	2 cut(s)	488, 1093
AcuI	CTGAAG	1 cut(s)	1748
AcvI	CACGTG	1 cut(s)	2167
AcyI	GRCGYC	3 cut(s)	1425, 1608, 1827
AfaI	GTAC	8 cut(s)	31, 74, 1449, 1514, 1547, 2138, 2229, 2434
AfeI	AGCGCT	2 cut(s)	405, 1891
AfiI	CCNNNNNNNGG	8 cut(s)	955, 1109, 1617, 1618, 1713, 1926, 1989, 2261
AflIII	ACRYGT	2 cut(s)	588, 1413
AgeI	ACCGGT	1 cut(s)	948
AgsI	TTSAA	9 cut(s)	157, 401, 412, 703, 1072, 1117, 1190, 1304, 1634
AjiI	CACGTC	1 cut(s)	1414
AjnI	CCWGG	7 cut(s)	765, 1228, 1650, 1861, 2025, 2239, 2361
AjuI	GAANNNNNNNTTGG	4 cut(s)	695, 727, 1199, 1231
AleI	CACNNNNGTG	1 cut(s)	1259
AloI	GAACNNNNNNTCC	2 cut(s)	1311, 1343
Alw21I	GWGCWC	8 cut(s)	273, 453, 730, 800, 813, 1300, 1788, 1887
Alw26I	GTCTC	8 cut(s)	141, 467, 921, 1138, 1921, 2050, 2096, 2402
Alw44I	GTGCAC	3 cut(s)	726, 1296, 1784
AlwI	GGATC	3 cut(s)	692, 2086, 2353
AlwNI	CAGNNNCTG	1 cut(s)	2362
Ama87I	CYCGRG	2 cut(s)	793, 1842
Aor51HI	AGCGCT	2 cut(s)	405, 1891
ApaI	GGGCCC	1 cut(s)	2256
ApaLI	GTGCAC	3 cut(s)	726, 1296, 1784
ApeKI	GCWGC	7 cut(s)	673, 770, 989, 1738, 1892, 1909, 2283
ApoI	RAATTY	2 cut(s)	488, 1093
AsiGI	ACCGGT	1 cut(s)	948
Asp700I	GAANNNNTTC	1 cut(s)	1127
Asp718I	GGTACC	1 cut(s)	1447
AsuC2I	CCSGG	7 cut(s)	165, 1444, 1765, 1810, 1875, 2034, 2215
AsuHPI	GGTGA	3 cut(s)	1669, 2377, 2425
AsuII	TTCGAA	1 cut(s)	1205
AvaI	CYCGRG	2 cut(s)	793, 1842
AvaII	GGWCC	5 cut(s)	638, 715, 1794, 2029, 2334
AxyI	CCTNAGG	1 cut(s)	680
BaeGI	GKGCMC	5 cut(s)	422, 730, 1300, 1788, 2256
BaeI	ACNNNNGTAYC	4 cut(s)	13, 46, 1431, 1464
BalI	TGGCCA	1 cut(s)	2319
BanI	GGYRCC	2 cut(s)	1447, 1607
BanII	GRGCYC	5 cut(s)	453, 800, 813, 1032, 2256
BarI	GAAGNNNNNNTAC	2 cut(s)	347, 379
BauI	CACGAG	1 cut(s)	272
BbrPI	CACGTG	1 cut(s)	2167
BbsI	GAAGAC	1 cut(s)	527
Bbv12I	GWGCWC	8 cut(s)	273, 453, 730, 800, 813, 1300, 1788, 1887
BbvCI	CCTCAGC	2 cut(s)	381, 554
BbvI	GCAGC	7 cut(s)	685, 757, 976, 1750, 1879, 1896, 2295
BceAI	ACGGC	3 cut(s)	259, 2194, 2296
BcgI	CGANNNNNNTGC	8 cut(s)	25, 59, 308, 342, 1585, 1619, 1676, 1710
BciT130I	CCWGG	7 cut(s)	767, 1230, 1652, 1863, 2027, 2241, 2363
BcnI	CCSGG	7 cut(s)	165, 1444, 1765, 1810, 1875, 2034, 2215
BcoDI	GTCTC	8 cut(s)	141, 467, 921, 1138, 1921, 2050, 2096, 2402
BfaI	CTAG	9 cut(s)	477, 665, 746, 930, 944, 974, 1146, 1287, 1853
BfmI	CTRYAG	2 cut(s)	1465, 2096
BfoI	RGCGCY	4 cut(s)	407, 1611, 1893, 2204
BglI	GCCNNNNNGGC	2 cut(s)	1036, 2198
BglII	AGATCT	1 cut(s)	281
BlpI	GCTNAGC	3 cut(s)	114, 452, 1886
Bme18I	GGWCC	5 cut(s)	638, 715, 1794, 2029, 2334
BmeT110I	CYCGRG	2 cut(s)	793, 1842
BmgBI	CACGTC	1 cut(s)	1414
BmsI	GCATC	4 cut(s)	316, 782, 1299, 1784
BpiI	GAAGAC	1 cut(s)	527
BpmI	CTGGAG	2 cut(s)	85, 1884
Bpu10I	CCTNAGC	3 cut(s)	381, 554, 1040
Bpu1102I	GCTNAGC	3 cut(s)	114, 452, 1886
Bpu14I	TTCGAA	1 cut(s)	1205
BpuMI	CCSGG	7 cut(s)	165, 1444, 1765, 1810, 1875, 2034, 2215
Bsa29I	ATCGAT	2 cut(s)	860, 1210
BsaAI	YACGTR	1 cut(s)	2167
BsaBI	GATNNNNATC	1 cut(s)	1206
BsaHI	GRCGYC	3 cut(s)	1425, 1608, 1827
BsaWI	WCCGGW	2 cut(s)	948, 1345
BsaXI	ACNNNNNCTCC	8 cut(s)	83, 113, 575, 605, 1964, 1994, 2030, 2060
Bsc4I	CCNNNNNNNGG	8 cut(s)	955, 1109, 1617, 1618, 1713, 1926, 1989, 2261
Bse118I	RCCGGY	2 cut(s)	32, 948
Bse1I	ACTGG	4 cut(s)	102, 534, 1269, 1913
Bse21I	CCTNAGG	1 cut(s)	680
Bse3DI	GCAATG	2 cut(s)	832, 853
Bse8I	GATNNNNATC	1 cut(s)	1206
BseBI	CCWGG	7 cut(s)	767, 1230, 1652, 1863, 2027, 2241, 2363
BseCI	ATCGAT	2 cut(s)	860, 1210
BseJI	GATNNNNATC	1 cut(s)	1206
BseLI	CCNNNNNNNGG	8 cut(s)	955, 1109, 1617, 1618, 1713, 1926, 1989, 2261
BseMI	GCAATG	2 cut(s)	832, 853
BseMII	CTCAG	9 cut(s)	128, 146, 213, 395, 466, 545, 694, 1031, 1900
BseNI	ACTGG	4 cut(s)	102, 534, 1269, 1913
BsePI	GCGCGC	1 cut(s)	2056
BseRI	GAGGAG	1 cut(s)	1732
BseSI	GKGCMC	5 cut(s)	422, 730, 1300, 1788, 2256
BseXI	GCAGC	7 cut(s)	685, 757, 976, 1750, 1879, 1896, 2295
Bsh1236I	CGCG	7 cut(s)	1686, 1947, 2058, 2117, 2141, 2248, 2250
Bsh1285I	CGRYCG	1 cut(s)	953
BshNI	GGYRCC	2 cut(s)	1447, 1607
BshTI	ACCGGT	1 cut(s)	948
BshVI	ATCGAT	2 cut(s)	860, 1210
BsiEI	CGRYCG	1 cut(s)	953
BsiHKAI	GWGCWC	8 cut(s)	273, 453, 730, 800, 813, 1300, 1788, 1887
BsiHKCI	CYCGRG	2 cut(s)	793, 1842
BslFI	GGGAC	5 cut(s)	180, 329, 1985, 2198, 2320
BslI	CCNNNNNNNGG	8 cut(s)	955, 1109, 1617, 1618, 1713, 1926, 1989, 2261
BsmAI	GTCTC	8 cut(s)	141, 467, 921, 1138, 1921, 2050, 2096, 2402
BsmBI	CGTCTC	3 cut(s)	1138, 2050, 2402
BsmFI	GGGAC	5 cut(s)	180, 329, 1985, 2198, 2320
BsoBI	CYCGRG	2 cut(s)	793, 1842
Bsp119I	TTCGAA	1 cut(s)	1205
Bsp120I	GGGCCC	1 cut(s)	2252
Bsp143I	GATC	7 cut(s)	281, 319, 684, 962, 2091, 2358, 2445
Bsp1720I	GCTNAGC	3 cut(s)	114, 452, 1886
Bsp19I	CCATGG	3 cut(s)	777, 867, 993
BspCNI	CTCAG	9 cut(s)	127, 145, 214, 394, 465, 546, 693, 1030, 1899
BspDI	ATCGAT	2 cut(s)	860, 1210
BspFNI	CGCG	7 cut(s)	1686, 1947, 2058, 2117, 2141, 2248, 2250
BspHI	TCATGA	1 cut(s)	1836
BspPI	GGATC	3 cut(s)	692, 2086, 2353
BspQI	GCTCTTC	2 cut(s)	261, 663
BspT104I	TTCGAA	1 cut(s)	1205
BspT107I	GGYRCC	2 cut(s)	1447, 1607
BsrBI	CCGCTC	3 cut(s)	581, 790, 2331
BsrDI	GCAATG	2 cut(s)	832, 853
BsrFI	RCCGGY	2 cut(s)	32, 948
BsrI	ACTGG	4 cut(s)	102, 534, 1269, 1913
BssAI	RCCGGY	2 cut(s)	32, 948
BssHII	GCGCGC	1 cut(s)	2056
BssMI	GATC	7 cut(s)	281, 319, 684, 962, 2091, 2358, 2445
BssNI	GRCGYC	3 cut(s)	1425, 1608, 1827
BssSI	CACGAG	1 cut(s)	272
BssT1I	CCWWGG	5 cut(s)	777, 867, 993, 2019, 2077
Bst2BI	CACGAG	1 cut(s)	272
Bst2UI	CCWGG	7 cut(s)	767, 1230, 1652, 1863, 2027, 2241, 2363
Bst6I	CTCTTC	2 cut(s)	261, 663
BstACI	GRCGYC	3 cut(s)	1425, 1608, 1827
BstAPI	GCANNNNNTGC	1 cut(s)	1501
BstBAI	YACGTR	1 cut(s)	2167
BstBI	TTCGAA	1 cut(s)	1205
BstDSI	CCRYGG	4 cut(s)	777, 867, 993, 2394
BstFNI	CGCG	7 cut(s)	1686, 1947, 2058, 2117, 2141, 2248, 2250
BstH2I	RGCGCY	4 cut(s)	407, 1611, 1893, 2204
BstKTI	GATC	7 cut(s)	284, 322, 687, 965, 2094, 2361, 2448
BstMAI	GTCTC	8 cut(s)	141, 467, 921, 1138, 1921, 2050, 2096, 2402
BstMBI	GATC	7 cut(s)	281, 319, 684, 962, 2091, 2358, 2445
BstMCI	CGRYCG	1 cut(s)	953
BstNI	CCWGG	7 cut(s)	767, 1230, 1652, 1863, 2027, 2241, 2363
BstNSI	RCATGY	7 cut(s)	97, 592, 1504, 1541, 1726, 2089, 2109
BstSFI	CTRYAG	2 cut(s)	1465, 2096
BstSLI	GKGCMC	5 cut(s)	422, 730, 1300, 1788, 2256
BstUI	CGCG	7 cut(s)	1686, 1947, 2058, 2117, 2141, 2248, 2250
BstV1I	GCAGC	7 cut(s)	685, 757, 976, 1750, 1879, 1896, 2295
BstV2I	GAAGAC	1 cut(s)	527
BstX2I	RGATCY	2 cut(s)	281, 2358
BstXI	CCANNNNNNTGG	2 cut(s)	1276, 2167
BstYI	RGATCY	2 cut(s)	281, 2358
Bsu15I	ATCGAT	2 cut(s)	860, 1210
Bsu36I	CCTNAGG	1 cut(s)	680
BsuTUI	ATCGAT	2 cut(s)	860, 1210
BtgI	CCRYGG	4 cut(s)	777, 867, 993, 2394
BtgZI	GCGATG	2 cut(s)	1962, 1999
BtrI	CACGTC	1 cut(s)	1414
BtsI	GCAGTG	3 cut(s)	43, 1692, 1701
BtsIMutI	CAGTG	7 cut(s)	43, 109, 1254, 1276, 1692, 1701, 2299
CaiI	CAGNNNCTG	1 cut(s)	2362
CciI	TCATGA	1 cut(s)	1836
Cfr10I	RCCGGY	2 cut(s)	32, 948
ClaI	ATCGAT	2 cut(s)	860, 1210
CpoI	CGGWCCG	1 cut(s)	638
CseI	GACGC	5 cut(s)	532, 1433, 1663, 2032, 2123
Csp6I	GTAC	8 cut(s)	30, 73, 1448, 1513, 1546, 2137, 2228, 2433
CspAI	ACCGGT	1 cut(s)	948
CspCI	CAANNNNNGTGG	2 cut(s)	39, 74
CspI	CGGWCCG	1 cut(s)	638
CviQI	GTAC	8 cut(s)	30, 73, 1448, 1513, 1546, 2137, 2228, 2433
DinI	GGCGCC	1 cut(s)	1609
DpnI	GATC	7 cut(s)	283, 321, 686, 964, 2093, 2360, 2447
DpnII	GATC	7 cut(s)	281, 319, 684, 962, 2091, 2358, 2445
DrdI	GACNNNNNNGTC	3 cut(s)	1826, 1832, 2398
DseDI	GACNNNNNNGTC	3 cut(s)	1826, 1832, 2398
EaeI	YGGCCR	2 cut(s)	2157, 2317
Eam1104I	CTCTTC	2 cut(s)	261, 663
EarI	CTCTTC	2 cut(s)	261, 663
EciI	GGCGGA	1 cut(s)	2179
Ecl136II	GAGCTC	3 cut(s)	451, 798, 811
Eco130I	CCWWGG	5 cut(s)	777, 867, 993, 2019, 2077
Eco147I	AGGCCT	1 cut(s)	928
Eco24I	GRGCYC	5 cut(s)	453, 800, 813, 1032, 2256
Eco47I	GGWCC	5 cut(s)	638, 715, 1794, 2029, 2334
Eco47III	AGCGCT	2 cut(s)	405, 1891
Eco53kI	GAGCTC	3 cut(s)	451, 798, 811
Eco57I	CTGAAG	1 cut(s)	1748
Eco72I	CACGTG	1 cut(s)	2167
Eco81I	CCTNAGG	1 cut(s)	680
Eco88I	CYCGRG	2 cut(s)	793, 1842
EcoICRI	GAGCTC	3 cut(s)	451, 798, 811
EcoO109I	RGGNCCY	3 cut(s)	782, 2029, 2334
EcoRII	CCWGG	7 cut(s)	765, 1228, 1650, 1861, 2025, 2239, 2361
EcoT14I	CCWWGG	5 cut(s)	777, 867, 993, 2019, 2077
EcoT22I	ATGCAT	1 cut(s)	2111
EcoT38I	GRGCYC	5 cut(s)	453, 800, 813, 1032, 2256
EgeI	GGCGCC	1 cut(s)	1609
EheI	GGCGCC	1 cut(s)	1609
ErhI	CCWWGG	5 cut(s)	777, 867, 993, 2019, 2077
Esp3I	CGTCTC	3 cut(s)	1138, 2050, 2402
FaqI	GGGAC	5 cut(s)	180, 329, 1985, 2198, 2320
FauI	CCCGC	5 cut(s)	239, 1691, 2174, 2243, 2324
FblI	GTMKAC	1 cut(s)	1818
FriOI	GRGCYC	5 cut(s)	453, 800, 813, 1032, 2256
FspAI	RTGCGCAY	1 cut(s)	1774
FspBI	CTAG	9 cut(s)	477, 665, 746, 930, 944, 974, 1146, 1287, 1853
FspI	TGCGCA	1 cut(s)	1774
GsuI	CTGGAG	2 cut(s)	85, 1884
HaeII	RGCGCY	4 cut(s)	407, 1611, 1893, 2204
HgaI	GACGC	5 cut(s)	532, 1433, 1663, 2032, 2123
Hin1I	GRCGYC	3 cut(s)	1425, 1608, 1827
HincII	GTYRAC	5 cut(s)	1411, 1423, 1819, 2149, 2308
HindII	GTYRAC	5 cut(s)	1411, 1423, 1819, 2149, 2308
HinfI	GANTC	9 cut(s)	54, 168, 595, 1151, 1202, 1207, 1840, 2186, 2399
HphI	GGTGA	3 cut(s)	1669, 2377, 2425
Hpy188I	TCNGA	6 cut(s)	578, 815, 1020, 1138, 1645, 2358
Hpy99I	CGWCG	3 cut(s)	1783, 1823, 2315
HpyAV	CCTTC	8 cut(s)	246, 453, 697, 1046, 1053, 1488, 1640, 1707
HpyCH4IV	ACGT	4 cut(s)	1413, 1827, 2166, 2351
HpySE526I	ACGT	4 cut(s)	1413, 1827, 2166, 2351
Hsp92I	GRCGYC	3 cut(s)	1425, 1608, 1827
KasI	GGCGCC	1 cut(s)	1607
KflI	GGGWCCC	1 cut(s)	2334
KpnI	GGTACC	1 cut(s)	1451
Kzo9I	GATC	7 cut(s)	281, 319, 684, 962, 2091, 2358, 2445
LguI	GCTCTTC	2 cut(s)	261, 663
Lsp1109I	GCAGC	7 cut(s)	685, 757, 976, 1750, 1879, 1896, 2295
LweI	GCATC	4 cut(s)	316, 782, 1299, 1784
MaeI	CTAG	9 cut(s)	477, 665, 746, 930, 944, 974, 1146, 1287, 1853
MaeII	ACGT	4 cut(s)	1413, 1827, 2166, 2351
MaeIII	GTNAC	9 cut(s)	127, 208, 290, 362, 934, 1433, 1522, 1675, 2276
MalI	GATC	7 cut(s)	283, 321, 686, 964, 2093, 2360, 2447
MbiI	CCGCTC	3 cut(s)	581, 790, 2331
MboI	GATC	7 cut(s)	281, 319, 684, 962, 2091, 2358, 2445
MboII	GAAGA	5 cut(s)	278, 367, 532, 680, 2455
MflI	RGATCY	2 cut(s)	281, 2358
MlsI	TGGCCA	1 cut(s)	2319
MluCI	AATT	7 cut(s)	226, 488, 618, 645, 1001, 1093, 1360
MluNI	TGGCCA	1 cut(s)	2319
Mly113I	GGCGCC	1 cut(s)	1608
MlyI	GAGTC	5 cut(s)	162, 1160, 1834, 2180, 2408
MmeI	TCCRAC	2 cut(s)	1197, 2007
Mox20I	TGGCCA	1 cut(s)	2319
Mph1103I	ATGCAT	1 cut(s)	2111
MroXI	GAANNNNTTC	1 cut(s)	1127
MscI	TGGCCA	1 cut(s)	2319
MseI	TTAA	4 cut(s)	465, 1008, 1178, 1586
MslI	CAYNNNNRTG	4 cut(s)	429, 1259, 1661, 2165
Msp20I	TGGCCA	1 cut(s)	2319
MspA1I	CMGCKG	4 cut(s)	332, 1710, 1741, 2286
MvaI	CCWGG	7 cut(s)	767, 1230, 1652, 1863, 2027, 2241, 2363
MvnI	CGCG	7 cut(s)	1686, 1947, 2058, 2117, 2141, 2248, 2250
NarI	GGCGCC	1 cut(s)	1608
NciI	CCSGG	7 cut(s)	165, 1444, 1765, 1810, 1875, 2034, 2215
NcoI	CCATGG	3 cut(s)	777, 867, 993
NdeII	GATC	7 cut(s)	281, 319, 684, 962, 2091, 2358, 2445
NmuCI	GTSAC	7 cut(s)	127, 208, 290, 934, 1433, 1675, 2276
NsbI	TGCGCA	1 cut(s)	1774
NsiI	ATGCAT	1 cut(s)	2111
NspI	RCATGY	7 cut(s)	97, 592, 1504, 1541, 1726, 2089, 2109
NspV	TTCGAA	1 cut(s)	1205
OliI	CACNNNNGTG	1 cut(s)	1259
PaeI	GCATGC	3 cut(s)	1541, 1726, 2089
PagI	TCATGA	1 cut(s)	1836
PauI	GCGCGC	1 cut(s)	2056
PceI	AGGCCT	1 cut(s)	928
PciI	ACATGT	1 cut(s)	588
PciSI	GCTCTTC	2 cut(s)	261, 663
PcsI	WCGNNNNNNNCGW	2 cut(s)	1392, 1824
PdmI	GAANNNNTTC	1 cut(s)	1127
PfeI	GAWTC	4 cut(s)	54, 595, 1202, 1207
PfoI	TCCNGGA	1 cut(s)	163
PinAI	ACCGGT	1 cut(s)	948
PleI	GAGTC	5 cut(s)	162, 1159, 1834, 2180, 2407
PluTI	GGCGCC	1 cut(s)	1611
PmaCI	CACGTG	1 cut(s)	2167
PmlI	CACGTG	1 cut(s)	2167
PpsI	GAGTC	5 cut(s)	162, 1159, 1834, 2180, 2407
Ppu21I	YACGTR	1 cut(s)	2167
PpuMI	RGGWCCY	2 cut(s)	2029, 2334
PscI	ACATGT	1 cut(s)	588
Psp124BI	GAGCTC	3 cut(s)	453, 800, 813
Psp5II	RGGWCCY	2 cut(s)	2029, 2334
Psp6I	CCWGG	7 cut(s)	765, 1228, 1650, 1861, 2025, 2239, 2361
PspCI	CACGTG	1 cut(s)	2167
PspGI	CCWGG	7 cut(s)	765, 1228, 1650, 1861, 2025, 2239, 2361
PspOMI	GGGCCC	1 cut(s)	2252
PspPPI	RGGWCCY	2 cut(s)	2029, 2334
PstNI	CAGNNNCTG	1 cut(s)	2362
PsuI	RGATCY	2 cut(s)	281, 2358
PteI	GCGCGC	1 cut(s)	2056
RsaI	GTAC	8 cut(s)	31, 74, 1449, 1514, 1547, 2138, 2229, 2434
RsaNI	GTAC	8 cut(s)	30, 73, 1448, 1513, 1546, 2137, 2228, 2433
RseI	CAYNNNNRTG	4 cut(s)	429, 1259, 1661, 2165
Rsr2I	CGGWCCG	1 cut(s)	638
RsrII	CGGWCCG	1 cut(s)	638
SacI	GAGCTC	3 cut(s)	453, 800, 813
SalI	GTCGAC	1 cut(s)	1817
SapI	GCTCTTC	2 cut(s)	261, 663
SaqAI	TTAA	4 cut(s)	465, 1008, 1178, 1586
Sau3AI	GATC	7 cut(s)	281, 319, 684, 962, 2091, 2358, 2445
SchI	GAGTC	5 cut(s)	162, 1160, 1834, 2180, 2408
SfaNI	GCATC	4 cut(s)	316, 782, 1299, 1784
SfcI	CTRYAG	2 cut(s)	1465, 2096
SfoI	GGCGCC	1 cut(s)	1609
SfuI	TTCGAA	1 cut(s)	1205
SinI	GGWCC	5 cut(s)	638, 715, 1794, 2029, 2334
SmiMI	CAYNNNNRTG	4 cut(s)	429, 1259, 1661, 2165
SphI	GCATGC	3 cut(s)	1541, 1726, 2089
Sse9I	AATT	7 cut(s)	226, 488, 618, 645, 1001, 1093, 1360
SseBI	AGGCCT	1 cut(s)	928
SspDI	GGCGCC	1 cut(s)	1607
SspMI	CTAG	9 cut(s)	477, 665, 746, 930, 944, 974, 1146, 1287, 1853
SstI	GAGCTC	3 cut(s)	453, 800, 813
StuI	AGGCCT	1 cut(s)	928
StyI	CCWWGG	5 cut(s)	777, 867, 993, 2019, 2077
TaiI	ACGT	4 cut(s)	1416, 1830, 2169, 2354
TaqI	TCGA	9 cut(s)	593, 687, 697, 860, 953, 1205, 1210, 1778, 1818
TaqII	GACCGA	2 cut(s)	732, 1891
TasI	AATT	7 cut(s)	226, 488, 618, 645, 1001, 1093, 1360
TauI	GCSGC	6 cut(s)	332, 1873, 2120, 2274, 2289, 2456
TfiI	GAWTC	4 cut(s)	54, 595, 1202, 1207
Tru1I	TTAA	4 cut(s)	465, 1008, 1178, 1586
Tru9I	TTAA	4 cut(s)	465, 1008, 1178, 1586
TscAI	CASTG	7 cut(s)	43, 109, 1261, 1276, 1699, 1708, 2299
TseFI	GTSAC	7 cut(s)	127, 208, 290, 934, 1433, 1675, 2276
TseI	GCWGC	7 cut(s)	673, 770, 989, 1738, 1892, 1909, 2283
Tsp45I	GTSAC	7 cut(s)	127, 208, 290, 934, 1433, 1675, 2276
TspDTI	ATGAA	4 cut(s)	533, 1014, 1475, 2189
TspGWI	ACGGA	5 cut(s)	60, 1037, 1358, 1421, 1763
TspRI	CASTG	7 cut(s)	43, 109, 1261, 1276, 1699, 1708, 2299
VneI	GTGCAC	3 cut(s)	726, 1296, 1784
VpaK11BI	GGWCC	5 cut(s)	638, 715, 1794, 2029, 2334
XapI	RAATTY	2 cut(s)	488, 1093
XbaI	TCTAGA	1 cut(s)	973
XceI	RCATGY	7 cut(s)	97, 592, 1504, 1541, 1726, 2089, 2109
XcmI	CCANNNNNNNNNTGG	2 cut(s)	763, 1000
XmiI	GTMKAC	1 cut(s)	1818
XmnI	GAANNNNTTC	1 cut(s)	1127
XspI	CTAG	9 cut(s)	477, 665, 746, 930, 944, 974, 1146, 1287, 1853
ZraI	GACGTC	1 cut(s)	1828
Zsp2I	ATGCAT	1 cut(s)	2111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.