Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0008368

Physical Location & Seq

Genomic Coordinates Forward (+)

21026888 .. 21033545

Gene Structure 6658 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G156900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGAGTTTTGGGGGTTTTCTTGACAACAGTACCGGCAGTGGTGGCGGTGCAAGAATTGTGGCTGATATCTCTTACAACAACACTTCAAGCAGCACCCACAGCAACAATATGCCCTCCAGTGCACTTGCTCAGCCACGTCTTGTAACTCAGTCTCTCACTAAGTCCATGTTCAACTCTCCAGGACTCTCACTCGCCCTTCAGACAAATGCGGATGGGCAAGGCGATGTGACGAGAATGGCTGAGAATTTTGAGACCAACGTTGGGAGGAGGAGCCGAGAGGAAGAGCACGAGAGCAGATCTGGGAGTGATAATATGGATGGTGGTTCTGGGGACGATCAAGATGCTGCTGATAATACCAATCCTCGTAAGAAAAAACGATACCACCGACACACCCCGCAGCAAATCCAAGAACTTGAAGCGCTGTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAAAGATTGGAGCTCAGCAGAAGGCTTTGCTTGGAGACCAGACAAGTCAAATTCTGGTTCCAAAATCGCCGAACCCAGATGAAGACTCAACTGGAACGCCATGAGAACTCACTGCTGAGGCAAGAGAATGACAAACTTCGAGCGGAGAACATGTCGATTCGGGACGCAATGAGGAACCCAATTTGCTCAAACTGTGGTGGTCCTGCAATTATAGGAGAGATATCACTCGAAGAGCAACACCTCAGGATCGAAAATGCCCGATTGAAGGACGAGTTGGATCGAGTTTGTGCCCTCGCTGGGAAGTTTCTAGGCCGCCCCATTTCGTCCCTGGCCACATCAATGGGGCCTCCACTACCGAGCTCAACCTTGGAGCTCGGAGTTGGGAGCAATGGCTTTGGTGGGTTGAGCTCTGTGGCTACATCAATGCCAGTGGGGCCTGATTTTGGAGGTGGGATTGGGAGCGCCATGTCAGTTGTGCCTCACTCTAGGCCTAGTGTGACCGGCCTGGACCGGTCGATGGAGAGATCGATGTTTCTAGAGCTTGCCTTGGCTGCCATGGATGAGTTGGTGAAGCTGGCTCAGACAGATGAGCCACTTTGGCTGAGGAGCTTGGAGGGTGGAAGAGAGGTTTTGAACCATGAAGAATACATGAGAAGTTTCACTCCTTGCATTGGGTTGAAGCCAAATGGTTTTGTTACCGAGGCTTCTAGGGAGACTGGCATGGTCATTATCAACAGCTTGGCCCTTGTTGAGACTTTGATGGAATCGAATCGGTGGTTGGAGATGTTTCCTTGTTTGGTTGCTAGAACCTCGACCACTGATGTCATTTCTAGTGGAATGGGAGGAACTAGAAATGGTGCACTTCAACTGATGCATGCTGAGCTACAAGTACTATCCCCTTTGGTTCCGGTTCGGGAGGTAAATTTCCTCCGCTTCTGCAAGCAGCACGCAGAGGGCGTGTGGGCTGTGGTCGATGTGTCGGTCGACACCATCCGTGACACCTCCGGTGCACCTACATTTATGAACTGCAGGAGGCTCCCTTCTGGTTGTGTTGTGCAAGATATGCCTAATGGGTATTCTAAGGTTACATGGGTTGAGCATGCAGAGTACGATGAGAGCCAAGTCCACCAGCTCTACCGACCCATGCTGAGCTCCGGCATGGGCTTCGGCGCGCAACGGTGGGTCGCTACCCTCCAACGCCAATGCGAGTGCCTCGCCATTCTCATGTCCTCCTCCGTTCCCACCCGCGACCACACTGCGATCACGGCGAGCGGGCGGAGGAGCATGCTGAAGCTGGCGCAGCGGATGACGGACAACTTCTGTGCTGGCGTGTGTGCGTCCACAGTGCACAAATGGAACAAGCTGAACGCGCGGAACGTGGACGAGGACGTCCGGGTCATGACCAGGGAGAGCCTTGACGACCCGGGCGAGCCGCCCGGGATCGTGCTCAGCGCTGCCACTTCAGTCTGGCTGCCCGTCTCCCCACAGAGGCTCTTTGATTTCCTGCGTGACGAACGACTCAGGAGCGAGTGGGACATACTCTCCAACGGTGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAGGATCCAGGCAACTGCGTCTCCCTCCTTCGCGCCAGAGCAATGAACGCAAACCAAAGCAGCATGCTGATCTTGCAAGAGACATGCATAGACTCTGCGGGAGGCCTTGTGGTATACGCGCCTGTTGACATTCCGGCCATGCACGTTGTCATGAACGGCGGGGATTCCGCCTACGTGGCGCTCCTCCCGTCCGGGTTCGCCATTGTCCCGGATGGGCCAGGCTCGCGTGGGCCTATGACCGTCAAAGGTGGCGGTCACGGAAGCAGCAATGGGGGAGGAGGCGAGGACGCCACGCATAGAGTGAGTGGGTCCCTACTGACAATGACGTTTCAGATCCTGGTGAACAGCCTGCCCTCAGCCAAGCTGACGGTGGAGTCGGTGGAGACCGTCAACAACCTCATCTCGTGCACTGTCCAGAAGATCAAGGCCGCCCTACATTGTGAAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042335 GO:0042545 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0045229 GO:0045595 GO:0045596 GO:0048364 GO:0048367 GO:0048437 GO:0048468 GO:0048469 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090627 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

830

Amino Acids

90.22

Weight (kDa)

5.97

Isoelectric Point (pI)

49.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61150 AT4G00730 AT4G00730
fragaria_vesca	FvH4_7g13350 FvH4_7g13350
malus_domestica	MD01G1050200.v1.1 MD07G1127600.v1.1
prunus_persica	Prupe.2G156900_v2.0.a1 Prupe.2G156900_v2.0.a1
pyrus_communis	pycom01g07490 pycom07g12270
rosa_chinensis	RchiOBHm_Chr1g0352671
rosa_laevigata	RLG00000028322
rosa_multiflora	Rmu_co8513183.1_g000001 Rmu_sc0005118.1_g000003
rosa_roxburghii	Rroxscaffold_4G00302500
rosa_rugosa	Rorug01G0230700 Rorug01G0230800 Rorug01G0230900
rosa_samantha	Rh1AG243900 Rh1BG214500 Rh1CG227900 Rh1DG240600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	1841, 1847, 2413
AatII	GACGTC	1 cut(s)	1845
AccBSI	CCGCTC	2 cut(s)	596, 1725
AccI	GTMKAC	2 cut(s)	1437, 2154
AccII	CGCG	7 cut(s)	1625, 1701, 1823, 1825, 2073, 2159, 2266
AclI	AACGTT	1 cut(s)	258
AclWI	GGATC	6 cut(s)	707, 738, 1901, 2039, 2052, 2368
AcoI	YGGCCR	2 cut(s)	783, 2175
AcsI	RAATTY	3 cut(s)	244, 503, 1375
AcuI	CTGAAG	3 cut(s)	182, 1763, 1899
AcyI	GRCGYC	2 cut(s)	1842, 2328
AfaI	GTAC	3 cut(s)	31, 1344, 1562
AfeI	AGCGCT	2 cut(s)	420, 1906
AfiI	CCNNNNNNNGG	8 cut(s)	261, 718, 750, 896, 970, 1124, 1941, 2004
AflIII	ACRYGT	1 cut(s)	603
AgeI	ACCGGT	1 cut(s)	963
AgsI	TTSAA	8 cut(s)	87, 172, 416, 427, 718, 1087, 1132, 1319
AjiI	CACGTC	1 cut(s)	137
AjnI	CCWGG	8 cut(s)	178, 780, 957, 1856, 2040, 2047, 2257, 2376
AjuI	GAANNNNNNNTTGG	6 cut(s)	443, 475, 710, 742, 1214, 1246
Alw26I	GTCTC	9 cut(s)	156, 245, 482, 1160, 1199, 1936, 2065, 2114, 2417
Alw44I	GTGCAC	5 cut(s)	120, 1311, 1461, 1799, 2446
AlwI	GGATC	6 cut(s)	707, 738, 1901, 2039, 2052, 2368
AlwNI	CAGNNNCTG	1 cut(s)	2377
Ama87I	CYCGRG	2 cut(s)	1876, 1889
Aor51HI	AGCGCT	2 cut(s)	420, 1906
ApaI	GGGCCC	1 cut(s)	2010
ApaLI	GTGCAC	5 cut(s)	120, 1311, 1461, 1799, 2446
ApoI	RAATTY	3 cut(s)	244, 503, 1375
AsiGI	ACCGGT	1 cut(s)	963
AsuC2I	CCSGG	7 cut(s)	1847, 1877, 1878, 1890, 1891, 2233, 2249
AsuHPI	GGTGA	2 cut(s)	1033, 2392
AvaI	CYCGRG	2 cut(s)	1876, 1889
AvaII	GGWCC	3 cut(s)	653, 961, 2349
AxyI	CCTNAGG	1 cut(s)	695
BaeGI	GKGCMC	7 cut(s)	124, 745, 1315, 1465, 1803, 2010, 2450
BaeI	ACNNNNGTAYC	2 cut(s)	13, 46
BalI	TGGCCA	1 cut(s)	785
BamHI	GGATCC	1 cut(s)	2044
BanII	GRGCYC	6 cut(s)	468, 815, 828, 863, 1607, 2010
BauI	CACGAG	2 cut(s)	287, 2443
BbsI	GAAGAC	1 cut(s)	542
BbvCI	CCTCAGC	3 cut(s)	569, 1055, 2395
BccI	CCATC	7 cut(s)	206, 311, 964, 1207, 1451, 2014, 2246
BceAI	ACGGC	2 cut(s)	1734, 2212
BcgI	CGANNNNNNTGC	6 cut(s)	323, 357, 1600, 1634, 1691, 1725
BciT130I	CCWGG	8 cut(s)	180, 782, 959, 1858, 2042, 2049, 2259, 2378
BcnI	CCSGG	7 cut(s)	1847, 1877, 1878, 1890, 1891, 2233, 2249
BcoDI	GTCTC	9 cut(s)	156, 245, 482, 1160, 1199, 1936, 2065, 2114, 2417
BfaI	CTAG	8 cut(s)	761, 939, 945, 989, 1161, 1257, 1284, 1302
BfmI	CTRYAG	1 cut(s)	1480
BfoI	RGCGCY	4 cut(s)	422, 918, 1908, 2222
BglI	GCCNNNNNGGC	3 cut(s)	886, 1051, 2216
BglII	AGATCT	1 cut(s)	296
BlpI	GCTNAGC	5 cut(s)	129, 467, 1332, 1601, 1901
BmcAI	AGTACT	1 cut(s)	1344
Bme18I	GGWCC	3 cut(s)	653, 961, 2349
BmeT110I	CYCGRG	2 cut(s)	1876, 1889
BmgBI	CACGTC	1 cut(s)	137
BmsI	GCATC	2 cut(s)	331, 1314
BpiI	GAAGAC	1 cut(s)	542
BpmI	CTGGAG	2 cut(s)	100, 162
Bpu10I	CCTNAGC	3 cut(s)	569, 1055, 2395
Bpu1102I	GCTNAGC	5 cut(s)	129, 467, 1332, 1601, 1901
BpuMI	CCSGG	7 cut(s)	1847, 1877, 1878, 1890, 1891, 2233, 2249
Bsa29I	ATCGAT	1 cut(s)	980
BsaAI	YACGTR	1 cut(s)	2215
BsaHI	GRCGYC	2 cut(s)	1842, 2328
BsaI	GGTCTC	3 cut(s)	245, 482, 2417
BsaJI	CCNNGG	9 cut(s)	780, 819, 999, 1008, 1152, 1857, 1876, 1889, 2034
BsaWI	WCCGGW	3 cut(s)	963, 1360, 1457
BsaXI	ACNNNNNCTCC	8 cut(s)	590, 620, 1979, 2009, 2045, 2075, 2133, 2163
Bsc4I	CCNNNNNNNGG	8 cut(s)	261, 718, 750, 896, 970, 1124, 1941, 2004
Bse118I	RCCGGY	3 cut(s)	32, 953, 963
Bse1I	ACTGG	4 cut(s)	117, 549, 881, 1174
Bse21I	CCTNAGG	1 cut(s)	695
Bse3DI	GCAATG	4 cut(s)	627, 847, 2088, 2314
BseBI	CCWGG	8 cut(s)	180, 782, 959, 1858, 2042, 2049, 2259, 2378
BseCI	ATCGAT	1 cut(s)	980
BseDI	CCNNGG	9 cut(s)	780, 819, 999, 1008, 1152, 1857, 1876, 1889, 2034
BseGI	GGATG	7 cut(s)	217, 322, 439, 1018, 1443, 1764, 2257
BseLI	CCNNNNNNNGG	8 cut(s)	261, 718, 750, 896, 970, 1124, 1941, 2004
BseMI	GCAATG	4 cut(s)	627, 847, 2088, 2314
BseNI	ACTGG	4 cut(s)	117, 549, 881, 1174
BsePI	GCGCGC	1 cut(s)	1623
BseRI	GAGGAG	7 cut(s)	280, 283, 1072, 1675, 1747, 2213, 2331
BseSI	GKGCMC	7 cut(s)	124, 745, 1315, 1465, 1803, 2010, 2450
BseYI	CCCAGC	1 cut(s)	749
Bsh1236I	CGCG	7 cut(s)	1625, 1701, 1823, 1825, 2073, 2159, 2266
Bsh1285I	CGRYCG	2 cut(s)	968, 1437
BshTI	ACCGGT	1 cut(s)	963
BshVI	ATCGAT	1 cut(s)	980
BsiEI	CGRYCG	2 cut(s)	968, 1437
BsiHKCI	CYCGRG	2 cut(s)	1876, 1889
BslFI	GGGAC	6 cut(s)	344, 629, 763, 2000, 2231, 2335
BslI	CCNNNNNNNGG	8 cut(s)	261, 718, 750, 896, 970, 1124, 1941, 2004
BsmAI	GTCTC	9 cut(s)	156, 245, 482, 1160, 1199, 1936, 2065, 2114, 2417
BsmBI	CGTCTC	2 cut(s)	1936, 2065
BsmFI	GGGAC	6 cut(s)	344, 629, 763, 2000, 2231, 2335
Bso31I	GGTCTC	3 cut(s)	245, 482, 2417
BsoBI	CYCGRG	2 cut(s)	1876, 1889
Bsp120I	GGGCCC	1 cut(s)	2006
Bsp1720I	GCTNAGC	5 cut(s)	129, 467, 1332, 1601, 1901
Bsp19I	CCATGG	1 cut(s)	1008
BspDI	ATCGAT	1 cut(s)	980
BspFNI	CGCG	7 cut(s)	1625, 1701, 1823, 1825, 2073, 2159, 2266
BspHI	TCATGA	2 cut(s)	1851, 2190
BspMAI	CTGCAG	1 cut(s)	1484
BspPI	GGATC	6 cut(s)	707, 738, 1901, 2039, 2052, 2368
BspQI	GCTCTTC	2 cut(s)	276, 678
BspTNI	GGTCTC	3 cut(s)	245, 482, 2417
BsrBI	CCGCTC	2 cut(s)	596, 1725
BsrDI	GCAATG	4 cut(s)	627, 847, 2088, 2314
BsrFI	RCCGGY	3 cut(s)	32, 953, 963
BsrI	ACTGG	4 cut(s)	117, 549, 881, 1174
BssAI	RCCGGY	3 cut(s)	32, 953, 963
BssECI	CCNNGG	9 cut(s)	780, 819, 999, 1008, 1152, 1857, 1876, 1889, 2034
BssHII	GCGCGC	1 cut(s)	1623
BssNAI	GTATAC	1 cut(s)	2155
BssNI	GRCGYC	2 cut(s)	1842, 2328
BssSI	CACGAG	2 cut(s)	287, 2443
BssT1I	CCWWGG	4 cut(s)	819, 999, 1008, 2034
Bst1107I	GTATAC	1 cut(s)	2155
Bst2BI	CACGAG	2 cut(s)	287, 2443
Bst2UI	CCWGG	8 cut(s)	180, 782, 959, 1858, 2042, 2049, 2259, 2378
Bst4CI	ACNGT	9 cut(s)	29, 647, 1632, 1798, 2003, 2281, 2410, 2428, 2452
Bst6I	CTCTTC	3 cut(s)	276, 678, 1069
BstACI	GRCGYC	2 cut(s)	1842, 2328
BstAPI	GCANNNNNTGC	1 cut(s)	1516
BstBAI	YACGTR	1 cut(s)	2215
BstDSI	CCRYGG	1 cut(s)	1008
BstF5I	GGATG	7 cut(s)	217, 322, 439, 1018, 1443, 1764, 2257
BstFNI	CGCG	7 cut(s)	1625, 1701, 1823, 1825, 2073, 2159, 2266
BstH2I	RGCGCY	4 cut(s)	422, 918, 1908, 2222
BstMAI	GTCTC	9 cut(s)	156, 245, 482, 1160, 1199, 1936, 2065, 2114, 2417
BstMCI	CGRYCG	2 cut(s)	968, 1437
BstNI	CCWGG	8 cut(s)	180, 782, 959, 1858, 2042, 2049, 2259, 2378
BstNSI	RCATGY	6 cut(s)	607, 1331, 1556, 1741, 2107, 2127
BstSFI	CTRYAG	1 cut(s)	1480
BstSLI	GKGCMC	7 cut(s)	124, 745, 1315, 1465, 1803, 2010, 2450
BstUI	CGCG	7 cut(s)	1625, 1701, 1823, 1825, 2073, 2159, 2266
BstV2I	GAAGAC	1 cut(s)	542
BstX2I	RGATCY	3 cut(s)	296, 2044, 2373
BstXI	CCANNNNNNTGG	1 cut(s)	793
BstYI	RGATCY	3 cut(s)	296, 2044, 2373
BstZ17I	GTATAC	1 cut(s)	2155
Bsu15I	ATCGAT	1 cut(s)	980
Bsu36I	CCTNAGG	1 cut(s)	695
BsuTUI	ATCGAT	1 cut(s)	980
BtgI	CCRYGG	1 cut(s)	1008
BtgZI	GCGATG	2 cut(s)	237, 2014
BtrI	CACGTC	1 cut(s)	137
BtsCI	GGATG	7 cut(s)	217, 322, 439, 1018, 1443, 1764, 2257
BtsI	GCAGTG	3 cut(s)	43, 563, 1707
BtsIMutI	CAGTG	8 cut(s)	43, 124, 563, 888, 1269, 1707, 1803, 2448
CaiI	CAGNNNCTG	1 cut(s)	2377
CciI	TCATGA	2 cut(s)	1851, 2190
Cfr10I	RCCGGY	3 cut(s)	32, 953, 963
Cfr9I	CCCGGG	2 cut(s)	1876, 1889
ClaI	ATCGAT	1 cut(s)	980
CseI	GACGC	4 cut(s)	626, 1779, 2047, 2336
Csp6I	GTAC	3 cut(s)	30, 1343, 1561
CspAI	ACCGGT	1 cut(s)	963
CspCI	CAANNNNNGTGG	4 cut(s)	39, 74, 864, 899
CviQI	GTAC	3 cut(s)	30, 1343, 1561
DrdI	GACNNNNNNGTC	3 cut(s)	1841, 1847, 2413
DseDI	GACNNNNNNGTC	3 cut(s)	1841, 1847, 2413
EaeI	YGGCCR	2 cut(s)	783, 2175
Eam1104I	CTCTTC	3 cut(s)	276, 678, 1069
EarI	CTCTTC	3 cut(s)	276, 678, 1069
EciI	GGCGGA	2 cut(s)	1744, 2197
Ecl136II	GAGCTC	5 cut(s)	466, 813, 826, 861, 1605
Eco130I	CCWWGG	4 cut(s)	819, 999, 1008, 2034
Eco147I	AGGCCT	2 cut(s)	943, 2145
Eco24I	GRGCYC	6 cut(s)	468, 815, 828, 863, 1607, 2010
Eco31I	GGTCTC	3 cut(s)	245, 482, 2417
Eco32I	GATATC	2 cut(s)	67, 675
Eco47I	GGWCC	3 cut(s)	653, 961, 2349
Eco47III	AGCGCT	2 cut(s)	420, 1906
Eco53kI	GAGCTC	5 cut(s)	466, 813, 826, 861, 1605
Eco57I	CTGAAG	3 cut(s)	182, 1763, 1899
Eco81I	CCTNAGG	1 cut(s)	695
Eco88I	CYCGRG	2 cut(s)	1876, 1889
EcoICRI	GAGCTC	5 cut(s)	466, 813, 826, 861, 1605
EcoO109I	RGGNCCY	3 cut(s)	797, 887, 2349
EcoRII	CCWGG	8 cut(s)	178, 780, 957, 1856, 2040, 2047, 2257, 2376
EcoRV	GATATC	2 cut(s)	67, 675
EcoT14I	CCWWGG	4 cut(s)	819, 999, 1008, 2034
EcoT22I	ATGCAT	2 cut(s)	1329, 2129
EcoT38I	GRGCYC	6 cut(s)	468, 815, 828, 863, 1607, 2010
ErhI	CCWWGG	4 cut(s)	819, 999, 1008, 2034
Esp3I	CGTCTC	2 cut(s)	1936, 2065
FaqI	GGGAC	6 cut(s)	344, 629, 763, 2000, 2231, 2335
FauI	CCCGC	5 cut(s)	402, 1706, 1718, 2131, 2192
FblI	GTMKAC	2 cut(s)	1437, 2154
FokI	GGATG	7 cut(s)	224, 329, 426, 1025, 1430, 1771, 2264
FriOI	GRGCYC	6 cut(s)	468, 815, 828, 863, 1607, 2010
FspBI	CTAG	8 cut(s)	761, 939, 945, 989, 1161, 1257, 1284, 1302
GsaI	CCCAGC	1 cut(s)	753
GsuI	CTGGAG	2 cut(s)	100, 162
HaeII	RGCGCY	4 cut(s)	422, 918, 1908, 2222
HgaI	GACGC	4 cut(s)	626, 1779, 2047, 2336
Hin1I	GRCGYC	2 cut(s)	1842, 2328
HincII	GTYRAC	3 cut(s)	1438, 2167, 2431
HindII	GTYRAC	3 cut(s)	1438, 2167, 2431
HinfI	GANTC	9 cut(s)	183, 538, 610, 1217, 1222, 1971, 2132, 2204, 2414
HphI	GGTGA	2 cut(s)	1033, 2392
Hpy188I	TCNGA	4 cut(s)	201, 830, 1035, 2373
HpyAV	CCTTC	5 cut(s)	206, 468, 712, 1503, 2078
HpyCH4III	ACNGT	9 cut(s)	29, 647, 1632, 1798, 2003, 2281, 2410, 2428, 2452
HpyCH4IV	ACGT	7 cut(s)	136, 258, 1830, 1842, 2184, 2214, 2366
HpySE526I	ACGT	7 cut(s)	136, 258, 1830, 1842, 2184, 2214, 2366
Hsp92I	GRCGYC	2 cut(s)	1842, 2328
KflI	GGGWCCC	1 cut(s)	2349
LguI	GCTCTTC	2 cut(s)	276, 678
LweI	GCATC	2 cut(s)	331, 1314
MaeI	CTAG	8 cut(s)	761, 939, 945, 989, 1161, 1257, 1284, 1302
MaeII	ACGT	7 cut(s)	136, 258, 1830, 1842, 2184, 2214, 2366
MaeIII	GTNAC	8 cut(s)	142, 226, 949, 1147, 1448, 1537, 1961, 2294
MbiI	CCGCTC	2 cut(s)	596, 1725
MboII	GAAGA	6 cut(s)	293, 547, 695, 1086, 1106, 2470
MflI	RGATCY	3 cut(s)	296, 2044, 2373
MlsI	TGGCCA	1 cut(s)	785
MluCI	AATT	6 cut(s)	54, 244, 503, 633, 660, 1375
MluNI	TGGCCA	1 cut(s)	785
MlyI	GAGTC	5 cut(s)	177, 532, 1965, 2126, 2423
MmeI	TCCRAC	4 cut(s)	708, 1212, 1672, 2022
Mox20I	TGGCCA	1 cut(s)	785
Mph1103I	ATGCAT	2 cut(s)	1329, 2129
MscI	TGGCCA	1 cut(s)	785
MslI	CAYNNNNRTG	3 cut(s)	444, 791, 1676
Msp20I	TGGCCA	1 cut(s)	785
MspA1I	CMGCKG	1 cut(s)	1756
MvaI	CCWGG	8 cut(s)	180, 782, 959, 1858, 2042, 2049, 2259, 2378
MvnI	CGCG	7 cut(s)	1625, 1701, 1823, 1825, 2073, 2159, 2266
NciI	CCSGG	7 cut(s)	1847, 1877, 1878, 1890, 1891, 2233, 2249
NcoI	CCATGG	1 cut(s)	1008
NmeAIII	GCCGAG	1 cut(s)	299
NmuCI	GTSAC	5 cut(s)	226, 949, 1448, 1961, 2294
NsiI	ATGCAT	2 cut(s)	1329, 2129
NspI	RCATGY	6 cut(s)	607, 1331, 1556, 1741, 2107, 2127
PaeI	GCATGC	4 cut(s)	1331, 1556, 1741, 2107
PagI	TCATGA	2 cut(s)	1851, 2190
PauI	GCGCGC	1 cut(s)	1623
PceI	AGGCCT	2 cut(s)	943, 2145
PciI	ACATGT	1 cut(s)	603
PciSI	GCTCTTC	2 cut(s)	276, 678
PcsI	WCGNNNNNNNCGW	4 cut(s)	382, 1407, 1827, 1878
PfeI	GAWTC	4 cut(s)	610, 1217, 1222, 2204
PfoI	TCCNGGA	2 cut(s)	178, 2247
PinAI	ACCGGT	1 cut(s)	963
PleI	GAGTC	5 cut(s)	177, 532, 1965, 2126, 2422
PpsI	GAGTC	5 cut(s)	177, 532, 1965, 2126, 2422
Ppu21I	YACGTR	1 cut(s)	2215
PpuMI	RGGWCCY	1 cut(s)	2349
PscI	ACATGT	1 cut(s)	603
Psp124BI	GAGCTC	5 cut(s)	468, 815, 828, 863, 1607
Psp1406I	AACGTT	1 cut(s)	258
Psp5II	RGGWCCY	1 cut(s)	2349
Psp6I	CCWGG	8 cut(s)	178, 780, 957, 1856, 2040, 2047, 2257, 2376
PspFI	CCCAGC	1 cut(s)	749
PspGI	CCWGG	8 cut(s)	178, 780, 957, 1856, 2040, 2047, 2257, 2376
PspOMI	GGGCCC	1 cut(s)	2006
PspPPI	RGGWCCY	1 cut(s)	2349
PstI	CTGCAG	1 cut(s)	1484
PstNI	CAGNNNCTG	1 cut(s)	2377
PsuI	RGATCY	3 cut(s)	296, 2044, 2373
PteI	GCGCGC	1 cut(s)	1623
RsaI	GTAC	3 cut(s)	31, 1344, 1562
RsaNI	GTAC	3 cut(s)	30, 1343, 1561
RseI	CAYNNNNRTG	3 cut(s)	444, 791, 1676
SacI	GAGCTC	5 cut(s)	468, 815, 828, 863, 1607
SalI	GTCGAC	1 cut(s)	1436
SapI	GCTCTTC	2 cut(s)	276, 678
ScaI	AGTACT	1 cut(s)	1344
SchI	GAGTC	5 cut(s)	177, 532, 1965, 2126, 2423
SfaNI	GCATC	2 cut(s)	331, 1314
SfcI	CTRYAG	1 cut(s)	1480
SinI	GGWCC	3 cut(s)	653, 961, 2349
SmaI	CCCGGG	2 cut(s)	1878, 1891
SmiMI	CAYNNNNRTG	3 cut(s)	444, 791, 1676
SphI	GCATGC	4 cut(s)	1331, 1556, 1741, 2107
Sse9I	AATT	6 cut(s)	54, 244, 503, 633, 660, 1375
SseBI	AGGCCT	2 cut(s)	943, 2145
SspMI	CTAG	8 cut(s)	761, 939, 945, 989, 1161, 1257, 1284, 1302
SstI	GAGCTC	5 cut(s)	468, 815, 828, 863, 1607
StuI	AGGCCT	2 cut(s)	943, 2145
StyI	CCWWGG	4 cut(s)	819, 999, 1008, 2034
TaaI	ACNGT	9 cut(s)	29, 647, 1632, 1798, 2003, 2281, 2410, 2428, 2452
TaiI	ACGT	7 cut(s)	139, 261, 1833, 1845, 2187, 2217, 2369
TaqII	GACCGA	1 cut(s)	1423
TasI	AATT	6 cut(s)	54, 244, 503, 633, 660, 1375
TatI	WGTACW	1 cut(s)	1342
TauI	GCSGC	3 cut(s)	768, 1888, 2471
TfiI	GAWTC	4 cut(s)	610, 1217, 1222, 2204
TscAI	CASTG	8 cut(s)	43, 124, 570, 888, 1276, 1714, 1803, 2455
TseFI	GTSAC	5 cut(s)	226, 949, 1448, 1961, 2294
Tsp45I	GTSAC	5 cut(s)	226, 949, 1448, 1961, 2294
TspDTI	ATGAA	5 cut(s)	548, 1107, 1490, 2099, 2207
TspGWI	ACGGA	4 cut(s)	1436, 1678, 1778, 2313
TspMI	CCCGGG	2 cut(s)	1876, 1889
TspRI	CASTG	8 cut(s)	43, 124, 570, 888, 1276, 1714, 1803, 2455
VneI	GTGCAC	5 cut(s)	120, 1311, 1461, 1799, 2446
VpaK11BI	GGWCC	3 cut(s)	653, 961, 2349
XapI	RAATTY	3 cut(s)	244, 503, 1375
XbaI	TCTAGA	1 cut(s)	988
XceI	RCATGY	6 cut(s)	607, 1331, 1556, 1741, 2107, 2127
XcmI	CCANNNNNNNNNTGG	4 cut(s)	778, 1015, 2017, 2407
XmaI	CCCGGG	2 cut(s)	1876, 1889
XmiI	GTMKAC	2 cut(s)	1437, 2154
XspI	CTAG	8 cut(s)	761, 939, 945, 989, 1161, 1257, 1284, 1302
ZraI	GACGTC	1 cut(s)	1843
ZrmI	AGTACT	1 cut(s)	1344
Zsp2I	ATGCAT	2 cut(s)	1329, 2129

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.