Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0008368

Physical Location & Seq

Genomic Coordinates Reverse (-)

21401416 .. 21406341

Gene Structure 4926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028322

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGAGTTTTGGGGGTTTTCTTGACAGTAGTACCGGCAGTAGTGGCGGTGCAAGAATCGTCGCTGATATTCCTTACAACAACCACCACCACCACCATCACCACAACGCCAACCACACCAGTATGCCCTCTAGTGCAATCGCTCAGCCTCGACTCGTAACTCAGTCTCTCACCAAATCAATGTTCAACAACTCACCAGGCCTCTCACTCGCTCTTCAGACTAATGCCGACGGAGGCGGAGACGCGCCGAGAATGGCTGAGAATTTCGAGGCGAATAATAACGTCGGCGGGCGGAGGAGCCGGGAGGAGGAGAACGAGATCAGTAGATCTGGCAGCGACAACATGGACGGCGCCGGCTCCGGCGACGAAGGAGACGCCGCGGATAACAGCAACCCTCGTAAGAAGAAGAGATACCACCGACACACCCCGCAGCAAATCCAAGAGCTCGAAGCGTTATTCAAGGAGTGCCCTCATCCTGATGAGAAGCAAAGGTTGGAGCTTAGCAGAAGGCTAAATCTTGAGACCCGGCAAGTCAAGTTCTGGTTCCAAAATCGCCGAACCCAGATGAAGACTCAACTTGAACGGCATGAGAACTCTTTGCTGAGGCAAGAGAACGATAAGCTTCGAGCCGAAAACATGTCCATCAGGGATGCCATGAGGAACCCAATTTGCACGAACTGCGGTGGTCCGGCCATGATAGGCGATATTTCTATTGAAGAGCAACATCTCAGGATTGACAATGCCCGATTAAAGGACGAGTTAGACCGGGTTTGTGCACTTGCCGGCAAGTTCTTGGGCCGCCCAATTTCGTCTCTAGGTCCATCAATGGGGCCGCCACTGCCGAGTTCAGCTCTAGAACTCGGAGTTGGGAACAATGGGTTCGGTGGGATGAGCTCAGTGGCTACAACAATGCCATTGGGACCCGATTTCGGAGCGGGGCTTGGGGGTGGCATGCCTATTGTGGCTCACACTAGGCCGGTGGCGGGAGGGCTCGACGAGAGGACTATGTTGTTAGAGCTAGCTTTGGCCGCCATGGATGAGCTTGTGAAGCTGGCTCAGAGTGATGAGCCACTTTGGCTGAGGAGCTTGGAAGGTGGGAGAGAGGTGCTGAATCACGAGGAGTACATGAGGAGTTTCACGCCTTGCATTGGGTTGAAGCCTAATGGCTTTGTTACCGAGGCTTCTAGGGAGACTGGTATGGTCATTATCAACAGTTTGGCTCTGGTTGAGACTCTGATGGACTCGAATCGATGGCTGGAGATGTTTCCTTGTATGATTGCCAGAACTTCTACCACTGATGTGATTTCCAGCGGTATGGGAGGGACCAGAAATGGTGCACTTCAACTGATGCGTGCTGAGCTTCAAGTCCTATCGCCTTTGGTTCCAGTCCGTGAGGTCAACTTCCTCCGCTTCTGCAAGCAGCATGCCGAGGGTGTGTGGGCGGTGGTGGATGTGTCTGTTGACACAGTCAGAGACAATTCCGGTGCACCCACATTTGTAAACTGCAGGAGGCTCCCTTCTGGCTGTGTTGTACAAGATATGCCTAATGGTTACTCCAAGGTTACATGGGTTGAGCATGCAGAGTATGACGAGAGCCAAGTCCATCACCTGTACCGACCCTTGTTGAGTTCCGGCATGGGGTTCGGCGCGCAGAGGTGGGTCGCCACCCTCCAGCGCCAATGCCAGTGCCTCGCTATCCTCATGTCCTCCACGGTCCCGGCCCGCGACCACGCCAATACCATCACCCAGAGCGGGAGGAAGAGCATGTTGAAGCTGGCGCAGCGAATGACTGACAACTTCTGCGCCGGGGTCTGCGCCTCGACGGTCCACAAATGGAATAAGCTGAACGCCGGCAATGTGGACGAGGACGTCCGCTACATGACCAGAGAGAGCATGGACGACCCCGGCGAGCCGCCGGGCGTTGTGCTCAGCGCTGCCACTTCGGTCTGGCTCCCAGTCTCCCCACAAAGGCTCTTCAATTTCTTGCGCGACGAGCGACTCAGGAGCGAGTGGGACATCCTCTCCAACGGTGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAGGACCAAGGCAACTGCGTCTCCCTCCTCCGCGCCAGAGCCATGAACGCAAACCAAAACAGCATGCTGATATTACAAGAGACGTGCATCGATGCGGCCGGGTCGCTTGTGGTGTACGCGCCGGTGGATATTCCGGCCATGCACGTGGTGATGAACGGAGGGGACTCGGCCTACGTGGCGCTGCTGCCGTCGGGGTTCGCGATAGTCCCGGACGGGCCTGGCTCGCGTGGTTCGGAGGCGAAGGCGGGCCAGGGCAGCAGCAACGGCGGCGGTGAGGCCAGAGTGAGTGGGTCACTGTTAACGATGACGTTTCAGATATTGGTCAACAGTCTGCCGTCGGCCAAGTTGACCGTGGAGTCGGTGGAGACTGTCAACAATCTCATCTCCTGCACCGTTCAGAAGATCAAGGCCGCGCTCCAGTGCGAGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042335 GO:0042545 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0045229 GO:0045595 GO:0045596 GO:0048364 GO:0048367 GO:0048437 GO:0048468 GO:0048469 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090627 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

832

Amino Acids

90.36

Weight (kDa)

6.12

Isoelectric Point (pI)

47.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	134 - 189	1.7e-19	Homeodomain
START	PF01852	338 - 562	5.5e-55	START domain
PDF2_C	PF25797	582 - 829	7.3e-105	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61150 AT4G00730 AT4G00730
fragaria_vesca	FvH4_7g13350 FvH4_7g13350
malus_domestica	MD01G1050200.v1.1 MD07G1127600.v1.1
prunus_persica	Prupe.2G156900_v2.0.a1 Prupe.2G156900_v2.0.a1
pyrus_communis	pycom01g07490 pycom07g12270
rosa_chinensis	RchiOBHm_Chr1g0352671
rosa_laevigata	RLG00000028322
rosa_multiflora	Rmu_co8513183.1_g000001 Rmu_sc0005118.1_g000003
rosa_roxburghii	Rroxscaffold_4G00302500
rosa_rugosa	Rorug01G0230700 Rorug01G0230800 Rorug01G0230900
rosa_samantha	Rh1AG243900 Rh1BG214500 Rh1CG227900 Rh1DG240600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1865, 2419
AatII	GACGTC	1 cut(s)	1869
AccB1I	GGYRCC	1 cut(s)	347
AccBSI	CCGCTC	2 cut(s)	932, 1749
AcoI	YGGCCR	5 cut(s)	687, 1023, 2160, 2199, 2403
AcsI	RAATTY	1 cut(s)	259
AcuI	CTGAAG	1 cut(s)	197
AcvI	CACGTG	1 cut(s)	2209
AcyI	GRCGYC	3 cut(s)	348, 372, 1866
AdeI	CACNNNGTG	1 cut(s)	2212
AfaI	GTAC	5 cut(s)	31, 1121, 1530, 1610, 2180
AfeI	AGCGCT	1 cut(s)	1930
AflIII	ACRYGT	1 cut(s)	633
AgsI	TTSAA	9 cut(s)	184, 457, 578, 713, 1153, 1340, 1361, 1768, 1975
AjiI	CACGTC	1 cut(s)	2148
AjnI	CCWGG	4 cut(s)	193, 2064, 2281, 2313
AjuI	GAANNNNNNNTTGG	6 cut(s)	164, 196, 473, 505, 846, 878
AleI	CACNNNNGTG	1 cut(s)	1295
Alw21I	GWGCWC	6 cut(s)	444, 775, 893, 1336, 1486, 1926
Alw44I	GTGCAC	3 cut(s)	771, 1332, 1482
Aor51HI	AGCGCT	1 cut(s)	1930
ApaI	GGGCCC	1 cut(s)	2034
ApaLI	GTGCAC	3 cut(s)	771, 1332, 1482
ApeKI	GCWGC	9 cut(s)	330, 427, 1417, 1777, 1931, 2245, 2248, 2319, 2322
ApoI	RAATTY	1 cut(s)	259
AsuC2I	CCSGG	9 cut(s)	299, 523, 764, 1715, 1804, 1902, 1914, 2164, 2273
AsuHPI	GGTGA	7 cut(s)	89, 160, 183, 1595, 1732, 2224, 2348
AsuNHI	GCTAGC	1 cut(s)	1015
AvaII	GGWCC	7 cut(s)	683, 815, 917, 1320, 1711, 1822, 2068
BaeGI	GKGCMC	5 cut(s)	467, 775, 1336, 1486, 2034
BaeI	ACNNNNGTAYC	2 cut(s)	13, 46
BanI	GGYRCC	1 cut(s)	347
BanII	GRGCYC	4 cut(s)	444, 893, 990, 2034
BarI	GAAGNNNNNNTAC	2 cut(s)	392, 424
BauI	CACGAG	1 cut(s)	1112
BbrPI	CACGTG	1 cut(s)	2209
BbsI	GAAGAC	1 cut(s)	572
Bbv12I	GWGCWC	6 cut(s)	444, 775, 893, 1336, 1486, 1926
BbvCI	CCTCAGC	2 cut(s)	599, 1076
BbvI	GCAGC	9 cut(s)	342, 439, 1429, 1789, 1918, 2232, 2235, 2331, 2334
BccI	CCATC	8 cut(s)	102, 647, 826, 1228, 1242, 1608, 1745, 2038
BceAI	ACGGC	5 cut(s)	361, 596, 2236, 2344, 2383
BcgI	CGANNNNNNTGC	2 cut(s)	1621, 1655
BciT130I	CCWGG	4 cut(s)	195, 2066, 2283, 2315
BcnI	CCSGG	9 cut(s)	299, 523, 764, 1715, 1804, 1902, 1914, 2164, 2273
BfaI	CTAG	6 cut(s)	129, 812, 851, 969, 1016, 1182
BfmI	CTRYAG	1 cut(s)	1501
BfoI	RGCGCY	4 cut(s)	351, 1675, 1932, 2246
BglI	GCCNNNNNGGC	2 cut(s)	1072, 2240
BglII	AGATCT	1 cut(s)	323
BlpI	GCTNAGC	4 cut(s)	141, 497, 1353, 1925
Bme18I	GGWCC	7 cut(s)	683, 815, 917, 1320, 1711, 1822, 2068
BmgBI	CACGTC	1 cut(s)	2148
BmrI	ACTGGG	1 cut(s)	1946
BmsI	GCATC	4 cut(s)	637, 1335, 2146, 2160
BmtI	GCTAGC	1 cut(s)	1019
BmuI	ACTGGG	1 cut(s)	1946
BpiI	GAAGAC	1 cut(s)	572
BplI	GAGNNNNNCTC	2 cut(s)	832, 864
BpmI	CTGGAG	3 cut(s)	1274, 1652, 2465
Bpu10I	CCTNAGC	2 cut(s)	599, 1076
Bpu1102I	GCTNAGC	4 cut(s)	141, 497, 1353, 1925
BpuEI	CTTGAG	1 cut(s)	536
BpuMI	CCSGG	9 cut(s)	299, 523, 764, 1715, 1804, 1902, 1914, 2164, 2273
Bsa29I	ATCGAT	2 cut(s)	1246, 2154
BsaAI	YACGTR	2 cut(s)	2209, 2239
BsaHI	GRCGYC	3 cut(s)	348, 372, 1866
BsaI	GGTCTC	1 cut(s)	512
BsaWI	WCCGGW	1 cut(s)	1478
BsaXI	ACNNNNNCTCC	4 cut(s)	2003, 2033, 2069, 2099
Bse118I	RCCGGY	6 cut(s)	32, 350, 779, 973, 1847, 2185
Bse1I	ACTGG	6 cut(s)	117, 1195, 1382, 1681, 1952, 2482
Bse3DI	GCAATG	1 cut(s)	1858
BseBI	CCWGG	4 cut(s)	195, 2066, 2283, 2315
BseCI	ATCGAT	2 cut(s)	1246, 2154
BseGI	GGATG	6 cut(s)	469, 652, 891, 1039, 1453, 2013
BseMI	GCAATG	1 cut(s)	1858
BseNI	ACTGG	6 cut(s)	117, 1195, 1382, 1681, 1952, 2482
BsePI	GCGCGC	1 cut(s)	1644
BseRI	GAGGAG	7 cut(s)	307, 317, 320, 1093, 1130, 1141, 2081
BseSI	GKGCMC	5 cut(s)	467, 775, 1336, 1486, 2034
BseX3I	CGGCCG	1 cut(s)	2160
BseXI	GCAGC	9 cut(s)	342, 439, 1429, 1789, 1918, 2232, 2235, 2331, 2334
BsgI	GTGCAG	1 cut(s)	2437
Bsh1285I	CGRYCG	1 cut(s)	2163
BshNI	GGYRCC	1 cut(s)	347
BshVI	ATCGAT	2 cut(s)	1246, 2154
BsiEI	CGRYCG	1 cut(s)	2163
BsiHKAI	GWGCWC	6 cut(s)	444, 775, 893, 1336, 1486, 1926
BslFI	GGGAC	6 cut(s)	930, 1333, 1697, 2024, 2240, 2255
BsmBI	CGTCTC	5 cut(s)	231, 363, 813, 2089, 2138
BsmFI	GGGAC	6 cut(s)	930, 1333, 1697, 2024, 2240, 2255
Bso31I	GGTCTC	1 cut(s)	512
Bsp120I	GGGCCC	1 cut(s)	2030
Bsp1286I	GDGCHC	9 cut(s)	444, 467, 775, 893, 990, 1336, 1486, 1926, 2034
Bsp1407I	TGTACA	1 cut(s)	1528
Bsp143I	GATC	3 cut(s)	315, 323, 2466
Bsp1720I	GCTNAGC	4 cut(s)	141, 497, 1353, 1925
Bsp19I	CCATGG	1 cut(s)	1029
Bsp68I	TCGCGA	1 cut(s)	2264
BspDI	ATCGAT	2 cut(s)	1246, 2154
BspMAI	CTGCAG	1 cut(s)	1505
BspOI	GCTAGC	1 cut(s)	1019
BspQI	GCTCTTC	4 cut(s)	216, 708, 1751, 1976
BspT107I	GGYRCC	1 cut(s)	347
BspTNI	GGTCTC	1 cut(s)	512
BsrBI	CCGCTC	2 cut(s)	932, 1749
BsrDI	GCAATG	1 cut(s)	1858
BsrFI	RCCGGY	6 cut(s)	32, 350, 779, 973, 1847, 2185
BsrGI	TGTACA	1 cut(s)	1528
BsrI	ACTGG	6 cut(s)	117, 1195, 1382, 1681, 1952, 2482
BssAI	RCCGGY	6 cut(s)	32, 350, 779, 973, 1847, 2185
BssHII	GCGCGC	1 cut(s)	1644
BssMI	GATC	3 cut(s)	315, 323, 2466
BssNI	GRCGYC	3 cut(s)	348, 372, 1866
BssSI	CACGAG	1 cut(s)	1112
BssT1I	CCWWGG	4 cut(s)	1029, 1554, 2058, 2071
Bst2BI	CACGAG	1 cut(s)	1112
Bst2UI	CCWGG	4 cut(s)	195, 2066, 2283, 2315
Bst6I	CTCTTC	5 cut(s)	216, 398, 708, 1751, 1976
BstACI	GRCGYC	3 cut(s)	348, 372, 1866
BstAPI	GCANNNNNTGC	1 cut(s)	675
BstAUI	TGTACA	1 cut(s)	1528
BstBAI	YACGTR	2 cut(s)	2209, 2239
BstDSI	CCRYGG	4 cut(s)	375, 1029, 1707, 2415
BstF5I	GGATG	6 cut(s)	469, 652, 891, 1039, 1453, 2013
BstH2I	RGCGCY	4 cut(s)	351, 1675, 1932, 2246
BstKTI	GATC	3 cut(s)	318, 326, 2469
BstMBI	GATC	3 cut(s)	315, 323, 2466
BstMCI	CGRYCG	1 cut(s)	2163
BstNI	CCWGG	4 cut(s)	195, 2066, 2283, 2315
BstNSI	RCATGY	6 cut(s)	637, 952, 1424, 1577, 1765, 2131
BstSFI	CTRYAG	1 cut(s)	1501
BstSLI	GKGCMC	5 cut(s)	467, 775, 1336, 1486, 2034
BstV1I	GCAGC	9 cut(s)	342, 439, 1429, 1789, 1918, 2232, 2235, 2331, 2334
BstV2I	GAAGAC	1 cut(s)	572
BstX2I	RGATCY	1 cut(s)	323
BstXI	CCANNNNNNTGG	2 cut(s)	1312, 2209
BstYI	RGATCY	1 cut(s)	323
BstZI	CGGCCG	1 cut(s)	2160
Bsu15I	ATCGAT	2 cut(s)	1246, 2154
BsuTUI	ATCGAT	2 cut(s)	1246, 2154
BtgI	CCRYGG	4 cut(s)	375, 1029, 1707, 2415
BtgZI	GCGATG	1 cut(s)	2038
BtrI	CACGTC	1 cut(s)	2148
BtsCI	GGATG	6 cut(s)	469, 652, 891, 1039, 1453, 2013
BtsI	GCAGTG	1 cut(s)	833
BtsIMutI	CAGTG	6 cut(s)	833, 900, 1290, 1688, 2357, 2489
BtuMI	TCGCGA	1 cut(s)	2264
Cfr10I	RCCGGY	6 cut(s)	32, 350, 779, 973, 1847, 2185
Cfr42I	CCGCGG	1 cut(s)	378
ClaI	ATCGAT	2 cut(s)	1246, 2154
CseI	GACGC	3 cut(s)	248, 380, 2071
Csp6I	GTAC	5 cut(s)	30, 1120, 1529, 1609, 2179
CviQI	GTAC	5 cut(s)	30, 1120, 1529, 1609, 2179
DinI	GGCGCC	1 cut(s)	349
DpnI	GATC	3 cut(s)	317, 325, 2468
DpnII	GATC	3 cut(s)	315, 323, 2466
DraIII	CACNNNGTG	1 cut(s)	2212
DrdI	GACNNNNNNGTC	2 cut(s)	1865, 2419
DseDI	GACNNNNNNGTC	2 cut(s)	1865, 2419
EaeI	YGGCCR	5 cut(s)	687, 1023, 2160, 2199, 2403
EagI	CGGCCG	1 cut(s)	2160
Eam1104I	CTCTTC	5 cut(s)	216, 398, 708, 1751, 1976
EarI	CTCTTC	5 cut(s)	216, 398, 708, 1751, 1976
EciI	GGCGGA	2 cut(s)	249, 304
Ecl136II	GAGCTC	2 cut(s)	442, 891
EclXI	CGGCCG	1 cut(s)	2160
Eco130I	CCWWGG	4 cut(s)	1029, 1554, 2058, 2071
Eco147I	AGGCCT	1 cut(s)	198
Eco24I	GRGCYC	4 cut(s)	444, 893, 990, 2034
Eco31I	GGTCTC	1 cut(s)	512
Eco47I	GGWCC	7 cut(s)	683, 815, 917, 1320, 1711, 1822, 2068
Eco47III	AGCGCT	1 cut(s)	1930
Eco52I	CGGCCG	1 cut(s)	2160
Eco53kI	GAGCTC	2 cut(s)	442, 891
Eco57I	CTGAAG	1 cut(s)	197
Eco72I	CACGTG	1 cut(s)	2209
EcoICRI	GAGCTC	2 cut(s)	442, 891
EcoO109I	RGGNCCY	1 cut(s)	917
EcoRII	CCWGG	4 cut(s)	193, 2064, 2281, 2313
EcoT14I	CCWWGG	4 cut(s)	1029, 1554, 2058, 2071
EcoT38I	GRGCYC	4 cut(s)	444, 893, 990, 2034
EgeI	GGCGCC	1 cut(s)	349
EheI	GGCGCC	1 cut(s)	349
ErhI	CCWWGG	4 cut(s)	1029, 1554, 2058, 2071
Esp3I	CGTCTC	5 cut(s)	231, 363, 813, 2089, 2138
FaqI	GGGAC	6 cut(s)	930, 1333, 1697, 2024, 2240, 2255
FauI	CCCGC	7 cut(s)	278, 432, 925, 973, 1727, 1742, 2302
FokI	GGATG	6 cut(s)	456, 659, 898, 1046, 1460, 2000
FriOI	GRGCYC	4 cut(s)	444, 893, 990, 2034
FspBI	CTAG	6 cut(s)	129, 812, 851, 969, 1016, 1182
GsuI	CTGGAG	3 cut(s)	1274, 1652, 2465
HaeII	RGCGCY	4 cut(s)	351, 1675, 1932, 2246
HgaI	GACGC	3 cut(s)	248, 380, 2071
Hin1I	GRCGYC	3 cut(s)	348, 372, 1866
HincII	GTYRAC	6 cut(s)	1396, 1459, 2364, 2389, 2412, 2437
HindII	GTYRAC	6 cut(s)	1396, 1459, 2364, 2389, 2412, 2437
HindIII	AAGCTT	1 cut(s)	617
HpaI	GTTAAC	1 cut(s)	2364
HphI	GGTGA	7 cut(s)	89, 160, 183, 1595, 1732, 2224, 2348
Hpy188I	TCNGA	9 cut(s)	216, 860, 929, 1056, 1233, 1469, 2299, 2379, 2463
Hpy188III	TCNNGA	8 cut(s)	20, 473, 515, 727, 851, 1112, 1999, 2263
Hpy99I	CGWCG	9 cut(s)	62, 230, 284, 365, 995, 1822, 1991, 2257, 2404
HpyAV	CCTTC	5 cut(s)	359, 498, 1082, 1524, 2299
HpyCH4IV	ACGT	6 cut(s)	279, 1866, 2147, 2208, 2238, 2372
HpySE526I	ACGT	6 cut(s)	279, 1866, 2147, 2208, 2238, 2372
Hsp92I	GRCGYC	3 cut(s)	348, 372, 1866
KasI	GGCGCC	1 cut(s)	347
KflI	GGGWCCC	1 cut(s)	917
KroI	GCCGGC	3 cut(s)	350, 779, 1847
KroNI	GCCGGC	3 cut(s)	352, 781, 1849
KspAI	GTTAAC	1 cut(s)	2364
KspI	CCGCGG	1 cut(s)	378
Kzo9I	GATC	3 cut(s)	315, 323, 2466
LguI	GCTCTTC	4 cut(s)	216, 708, 1751, 1976
LmnI	GCTCC	9 cut(s)	294, 359, 493, 929, 1080, 1515, 1953, 2001, 2484
Lsp1109I	GCAGC	9 cut(s)	342, 439, 1429, 1789, 1918, 2232, 2235, 2331, 2334
LweI	GCATC	4 cut(s)	637, 1335, 2146, 2160
MaeI	CTAG	6 cut(s)	129, 812, 851, 969, 1016, 1182
MaeII	ACGT	6 cut(s)	279, 1866, 2147, 2208, 2238, 2372
MaeIII	GTNAC	5 cut(s)	154, 1168, 1547, 1558, 2355
MalI	GATC	3 cut(s)	317, 325, 2468
MbiI	CCGCTC	2 cut(s)	932, 1749
MboI	GATC	3 cut(s)	315, 323, 2466
MboII	GAAGA	8 cut(s)	203, 412, 415, 577, 725, 1768, 1963, 2476
MflI	RGATCY	1 cut(s)	323
MhlI	GDGCHC	9 cut(s)	444, 467, 775, 893, 990, 1336, 1486, 1926, 2034
MluCI	AATT	5 cut(s)	259, 663, 801, 1474, 1975
Mly113I	GGCGCC	1 cut(s)	348
MlyI	GAGTC	7 cut(s)	144, 562, 1222, 1232, 1989, 2222, 2429
MmeI	TCCRAC	2 cut(s)	471, 2046
MroNI	GCCGGC	3 cut(s)	350, 779, 1847
MseI	TTAA	2 cut(s)	746, 2363
MslI	CAYNNNNRTG	4 cut(s)	119, 474, 1295, 2207
MspA1I	CMGCKG	2 cut(s)	377, 1308
MvaI	CCWGG	4 cut(s)	195, 2066, 2283, 2315
NaeI	GCCGGC	3 cut(s)	352, 781, 1849
NarI	GGCGCC	1 cut(s)	348
NciI	CCSGG	9 cut(s)	299, 523, 764, 1715, 1804, 1902, 1914, 2164, 2273
NcoI	CCATGG	1 cut(s)	1029
NdeII	GATC	3 cut(s)	315, 323, 2466
NgoMIV	GCCGGC	3 cut(s)	350, 779, 1847
NheI	GCTAGC	1 cut(s)	1015
NmeAIII	GCCGAG	4 cut(s)	270, 864, 1450, 2210
NmuCI	GTSAC	1 cut(s)	2355
NruI	TCGCGA	1 cut(s)	2264
NspI	RCATGY	6 cut(s)	637, 952, 1424, 1577, 1765, 2131
OliI	CACNNNNGTG	1 cut(s)	1295
PaeI	GCATGC	4 cut(s)	952, 1424, 1577, 2131
PauI	GCGCGC	1 cut(s)	1644
PceI	AGGCCT	1 cut(s)	198
PciI	ACATGT	1 cut(s)	633
PciSI	GCTCTTC	4 cut(s)	216, 708, 1751, 1976
PcsI	WCGNNNNNNNCGW	2 cut(s)	1902, 2261
PdiI	GCCGGC	3 cut(s)	352, 781, 1849
PfeI	GAWTC	3 cut(s)	54, 1108, 1243
PflFI	GACNNNGTC	1 cut(s)	1463
PfoI	TCCNGGA	1 cut(s)	2271
PleI	GAGTC	7 cut(s)	144, 562, 1222, 1232, 1989, 2222, 2428
PluTI	GGCGCC	1 cut(s)	351
PmaCI	CACGTG	1 cut(s)	2209
PmlI	CACGTG	1 cut(s)	2209
PpsI	GAGTC	7 cut(s)	144, 562, 1222, 1232, 1989, 2222, 2428
Ppu21I	YACGTR	2 cut(s)	2209, 2239
PpuMI	RGGWCCY	1 cut(s)	917
PscI	ACATGT	1 cut(s)	633
Psp124BI	GAGCTC	2 cut(s)	444, 893
Psp5II	RGGWCCY	1 cut(s)	917
Psp6I	CCWGG	4 cut(s)	193, 2064, 2281, 2313
PspCI	CACGTG	1 cut(s)	2209
PspGI	CCWGG	4 cut(s)	193, 2064, 2281, 2313
PspOMI	GGGCCC	1 cut(s)	2030
PspPPI	RGGWCCY	1 cut(s)	917
PstI	CTGCAG	1 cut(s)	1505
PsuI	RGATCY	1 cut(s)	323
PsyI	GACNNNGTC	1 cut(s)	1463
PteI	GCGCGC	1 cut(s)	1644
RruI	TCGCGA	1 cut(s)	2264
RsaI	GTAC	5 cut(s)	31, 1121, 1530, 1610, 2180
RsaNI	GTAC	5 cut(s)	30, 1120, 1529, 1609, 2179
RseI	CAYNNNNRTG	4 cut(s)	119, 474, 1295, 2207
SacI	GAGCTC	2 cut(s)	444, 893
SacII	CCGCGG	1 cut(s)	378
SapI	GCTCTTC	4 cut(s)	216, 708, 1751, 1976
SaqAI	TTAA	2 cut(s)	746, 2363
Sau3AI	GATC	3 cut(s)	315, 323, 2466
SchI	GAGTC	7 cut(s)	144, 562, 1222, 1232, 1989, 2222, 2429
SduI	GDGCHC	9 cut(s)	444, 467, 775, 893, 990, 1336, 1486, 1926, 2034
SfaNI	GCATC	4 cut(s)	637, 1335, 2146, 2160
SfcI	CTRYAG	1 cut(s)	1501
SfoI	GGCGCC	1 cut(s)	349
Sfr303I	CCGCGG	1 cut(s)	378
SgrAI	CRCCGGYG	1 cut(s)	2185
SgrBI	CCGCGG	1 cut(s)	378
SinI	GGWCC	7 cut(s)	683, 815, 917, 1320, 1711, 1822, 2068
SmiMI	CAYNNNNRTG	4 cut(s)	119, 474, 1295, 2207
SmlI	CTYRAG	1 cut(s)	515
SmoI	CTYRAG	1 cut(s)	515
SphI	GCATGC	4 cut(s)	952, 1424, 1577, 2131
Sse9I	AATT	5 cut(s)	259, 663, 801, 1474, 1975
SseBI	AGGCCT	1 cut(s)	198
SspDI	GGCGCC	1 cut(s)	347
SspMI	CTAG	6 cut(s)	129, 812, 851, 969, 1016, 1182
SstI	GAGCTC	2 cut(s)	444, 893
StuI	AGGCCT	1 cut(s)	198
StyI	CCWWGG	4 cut(s)	1029, 1554, 2058, 2071
TaiI	ACGT	6 cut(s)	282, 1869, 2150, 2211, 2241, 2375
TaqI	TCGA	9 cut(s)	148, 264, 444, 622, 990, 1241, 1246, 1817, 2154
TaqII	GACCGA	1 cut(s)	1930
TasI	AATT	5 cut(s)	259, 663, 801, 1474, 1975
TatI	WGTACW	2 cut(s)	1119, 1528
TauI	GCSGC	8 cut(s)	377, 798, 832, 1028, 1912, 2162, 2334, 2477
TfiI	GAWTC	3 cut(s)	54, 1108, 1243
Tru1I	TTAA	2 cut(s)	746, 2363
Tru9I	TTAA	2 cut(s)	746, 2363
TscAI	CASTG	6 cut(s)	840, 900, 1297, 1688, 2364, 2489
TseFI	GTSAC	1 cut(s)	2355
TseI	GCWGC	9 cut(s)	330, 427, 1417, 1777, 1931, 2245, 2248, 2319, 2322
Tsp45I	GTSAC	1 cut(s)	2355
TspDTI	ATGAA	3 cut(s)	578, 2123, 2231
TspGWI	ACGGA	3 cut(s)	243, 1376, 2235
TspRI	CASTG	6 cut(s)	840, 900, 1297, 1688, 2364, 2489
Tth111I	GACNNNGTC	1 cut(s)	1463
VneI	GTGCAC	3 cut(s)	771, 1332, 1482
VpaK11BI	GGWCC	7 cut(s)	683, 815, 917, 1320, 1711, 1822, 2068
XapI	RAATTY	1 cut(s)	259
XbaI	TCTAGA	1 cut(s)	850
XceI	RCATGY	6 cut(s)	637, 952, 1424, 1577, 1765, 2131
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1888, 2041, 2413
XspI	CTAG	6 cut(s)	129, 812, 851, 969, 1016, 1182
ZraI	GACGTC	1 cut(s)	1867

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.