Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0008368

Physical Location & Seq

Genomic Coordinates Reverse (-)

13556264 .. 13561864

Gene Structure 5601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g12270.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGAGTTTTGGGGGTTTTCTGGACAACAGTGCCGGCAGTGGTGTCGGTGCAAGAATCGTGGCTGACATTCCGTACACAAACAACAGCAACAACATGCCCTCCAGTGCAATCGCTCAGCCACGCCTTGTCACTCAGTCTCTCACTAAATCCATGTTCAACTCTCCGGGACTCTCACTTGCCCTACAGACAAATGTGGATGGGCAAGGAGATGTGACGAGAGTGGCTGAGAATTATGAGGCAAACAACGGCGGGAGAAGGAGCAGAGAGGAAGAGCACGAGAGCAGATCTGGGAGTGACAACATGGATGGTGCTTCTGGGGACGATCAAGATGCCGCTGACAACCACCACCCTCGTAAGAAGAAGCGTTACCACCGACACACCCCTCAGCAAATCCAAGAACTTGAAGCGCTGTTCAAAGAGTGTCCTCATCCTGATGAGAAGCAAAGATTAGAGCTGAGCAGAAGGCTTAACTTGGAGACTAGACAAGTCAAATTCTGGTTCCAAAATCGCCGAACCCAAATGAAGACGCAACTGGAACGCCATGAGAACTCGTTGCTGAGGCAAGAGAACGATAAGCTCCGAGCGGAGAACATGTCGATTCGTGAGGCTATGAGGAACCCAATTTGCTCAAACTGTGGCGGTCCGGCAATTATTGGAGATATATCACTAGAAGAGCAGCACCTCAGGATCGAAAATGCTCGATTGAAGGATGATTTGGACCGAGTTTGTGCACTCGCCGGAAAATTTCTAGGCCGACCCATTTCATCCCTGGCTGCATCCATGGGGCCTCCGCTCCCGAGCTCCACTTTGGAGCTCGGAGTTGGGAGCAATGGGTTTGGTGGGATGAGCAATGTGGCTACATCGATGTCCATGGGAAATGATTTTGGAGGTGGGATTGGGAGTGCTATGTCAGTTGTGTCTCATGGCAGGCCTAGTGTGACGGGGCTAGACCGGTCGATGGAGAGATCAATCTTTCTAGAGCTTGCTTTGGCTGCCATGGATGAATTGGTTAAGATGGCTCAGACGGATGAGCCCCTTTGGCTTAGGAGCTTAGAAGGTGCAAGGGAGGTTTTGAACCATGAGGAATACATGAGAAATTTCACTCCTTGCATTGGATTGAAACCGAATGGTTTCGTCTCCGAGGCTTCTAGGGAGTCTGGAATGGTCATCATCAACAGCTTAACTCTTGTTGAAACTTTGATGGATTCGAATCGATGGTTGGAGATGTTTCCTGGTGTGATTGCAAGAACCTCAACCACTGATGTGATTTCCAGTGGCATGGGAGGAACTAGAAATGGTGCACTTCAACTCATGCATGCTGAACTGCAAATCCTATCGCCCTTGGTTCCGGTTCGTGAGGTCAATTTCCTCCGTTTCTGCAAGCAGCACGCAGAGGGCGTGTGGGCTGTGGTTGACGTGTCGGTTGACGCCATCCGTGACACCTCCGGGGTACCGACATTTATGAACTGTAGGAGGCTCCCTTCTGGCTGTGTTGTGCAAGACATGCCCAATGGGTACTCTAAGGTTACATGGGTTGAGCATGCAGAGTACGATGAGAGCCAAGTCCACCACCTATACCGACCCTTGTTAAGTTCCGGCATGGGCTTCGGCGCCCAACGGTGGGTTGCCACCCTTCAACGCCAATCCGAGTGCCAGGCCATTCTCATGTCCTCCTCCGTCCCCTCCCGCGACCACACTGCTATCACTGCCAGCGGAAGGAGGAGCATGCTGAAGCTGGCGCATCGGATGACGGACAACTTCTGTGCCGGGGTGTGTGCGTCGACGGTGCACAAATGGACCAAGTTGAACGCCGGGAATGTCGACGAGGACGTCAGGGTCATGACTCGGGAAAGCCTAGACGACCCTGGCGAGCCGCCCGGTGTCGTGCTCAGCGCTGCCACTTCGGTCTGGCTGCCAGTCTCCCCACAGAGGCTATTTGATTTCTTGCGCGATGAGCGACTAAGGAGCGAGTGGGACATACTCTCCAACGGTGGGCCTATGCAGGAGATGGCCCACATCGCCAAGGGCCAGGACCCCGGCAACTGCGTCTCCCTCCTGCGCGCCAGAGCAAACGCAAACCAAGGTAGCATGCTGATCCTACAAGAGACATGCATAGACGCGGCAGGGTCTCTTGTTGTGTACGCGCCTGTTGACATTCCGGCCATGCACGTGGTTATGAACGGCGGGGACTCCGCCTATGTGGCGCTCCTGCCATCCGGGTTCGCAATTGTCCCTGATGGCCCGGGCTCGCGCGGGCCCATGTTTGGCAAAGGTGGCAGTCACGGCAGCGGCAACAGTGGCGGTGGCGTTGACGACGGTCTCCATAGAGTGAGCGGGTCCCTCCTGACGATGACGTTTCAGATCCTGGTGAACAGCCTGCCGACGGCCAAGCTGACCGTGGAGTCGGTGGAGACGGTGAACCACCTCATATCCTGTACCGTCCAGAAGATCAAGGCCGCCCTCCATTGTGAGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042335 GO:0042545 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0045229 GO:0045595 GO:0045596 GO:0048364 GO:0048367 GO:0048437 GO:0048468 GO:0048469 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090627 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

826

Amino Acids

89.75

Weight (kDa)

6.03

Isoelectric Point (pI)

47.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61150 AT4G00730 AT4G00730
fragaria_vesca	FvH4_7g13350 FvH4_7g13350
malus_domestica	MD01G1050200.v1.1 MD07G1127600.v1.1
prunus_persica	Prupe.2G156900_v2.0.a1 Prupe.2G156900_v2.0.a1
pyrus_communis	pycom01g07490 pycom07g12270
rosa_chinensis	RchiOBHm_Chr1g0352671
rosa_laevigata	RLG00000028322
rosa_multiflora	Rmu_co8513183.1_g000001 Rmu_sc0005118.1_g000003
rosa_roxburghii	Rroxscaffold_4G00302500
rosa_rugosa	Rorug01G0230700 Rorug01G0230800 Rorug01G0230900
rosa_samantha	Rh1AG243900 Rh1BG214500 Rh1CG227900 Rh1DG240600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	1829, 1835, 2401
AatII	GACGTC	1 cut(s)	1833
Acc65I	GGTACC	1 cut(s)	1450
AccB1I	GGYRCC	2 cut(s)	1450, 1610
AccBSI	CCGCTC	3 cut(s)	584, 793, 2334
AccI	GTMKAC	2 cut(s)	1781, 1821
AccII	CGCG	7 cut(s)	1689, 1950, 2061, 2120, 2144, 2251, 2253
AclWI	GGATC	3 cut(s)	695, 2089, 2356
AcoI	YGGCCR	2 cut(s)	2160, 2385
AcsI	RAATTY	3 cut(s)	491, 743, 1096
AcuI	CTGAAG	1 cut(s)	1751
AcvI	CACGTG	1 cut(s)	2170
AcyI	GRCGYC	3 cut(s)	1428, 1611, 1830
AfaI	GTAC	6 cut(s)	74, 1452, 1517, 1550, 2141, 2437
AfeI	AGCGCT	2 cut(s)	408, 1894
AfiI	CCNNNNNNNGG	9 cut(s)	958, 1112, 1620, 1621, 1716, 1929, 1992, 2264, 2383
AflIII	ACRYGT	2 cut(s)	591, 1416
AgeI	ACCGGT	1 cut(s)	951
AjiI	CACGTC	1 cut(s)	1417
AjnI	CCWGG	6 cut(s)	768, 1231, 1653, 1864, 2028, 2364
AjuI	GAANNNNNNNTTGG	4 cut(s)	698, 730, 1202, 1234
AleI	CACNNNNGTG	1 cut(s)	1262
AloI	GAACNNNNNNTCC	2 cut(s)	1314, 1346
Alw21I	GWGCWC	7 cut(s)	276, 733, 803, 816, 1303, 1791, 1890
Alw44I	GTGCAC	3 cut(s)	729, 1299, 1787
AlwI	GGATC	3 cut(s)	695, 2089, 2356
AlwNI	CAGNNNCTG	1 cut(s)	2365
Ama87I	CYCGRG	3 cut(s)	796, 1845, 2242
Aor51HI	AGCGCT	2 cut(s)	408, 1894
ApaI	GGGCCC	1 cut(s)	2259
ApaLI	GTGCAC	3 cut(s)	729, 1299, 1787
ApeKI	GCWGC	7 cut(s)	676, 773, 992, 1384, 1895, 1912, 2286
ApoI	RAATTY	3 cut(s)	491, 743, 1096
AsiGI	ACCGGT	1 cut(s)	951
Asp700I	GAANNNNTTC	1 cut(s)	1130
Asp718I	GGTACC	1 cut(s)	1450
AsuC2I	CCSGG	9 cut(s)	165, 1447, 1768, 1813, 1878, 2037, 2218, 2243, 2244
AsuHPI	GGTGA	2 cut(s)	2380, 2428
AsuII	TTCGAA	1 cut(s)	1208
AvaI	CYCGRG	3 cut(s)	796, 1845, 2242
AvaII	GGWCC	5 cut(s)	641, 718, 1797, 2032, 2337
AxyI	CCTNAGG	1 cut(s)	683
BaeGI	GKGCMC	4 cut(s)	733, 1303, 1791, 2259
BanI	GGYRCC	2 cut(s)	1450, 1610
BanII	GRGCYC	5 cut(s)	803, 816, 1035, 2249, 2259
BarI	GAAGNNNNNNTAC	2 cut(s)	350, 382
BauI	CACGAG	1 cut(s)	275
BbrPI	CACGTG	1 cut(s)	2170
BbsI	GAAGAC	1 cut(s)	530
Bbv12I	GWGCWC	7 cut(s)	276, 733, 803, 816, 1303, 1791, 1890
BbvCI	CCTCAGC	2 cut(s)	384, 557
BbvI	GCAGC	7 cut(s)	688, 760, 979, 1396, 1882, 1899, 2298
BceAI	ACGGC	4 cut(s)	262, 2197, 2299, 2400
BcgI	CGANNNNNNTGC	8 cut(s)	25, 59, 311, 345, 1588, 1622, 1679, 1713
BciT130I	CCWGG	6 cut(s)	770, 1233, 1655, 1866, 2030, 2366
BcnI	CCSGG	9 cut(s)	165, 1447, 1768, 1813, 1878, 2037, 2218, 2243, 2244
BfaI	CTAG	9 cut(s)	480, 668, 749, 933, 947, 977, 1149, 1290, 1856
BfmI	CTRYAG	2 cut(s)	182, 1468
BfoI	RGCGCY	4 cut(s)	410, 1614, 1896, 2207
BglI	GCCNNNNNGGC	2 cut(s)	1039, 2201
BglII	AGATCT	1 cut(s)	284
BlpI	GCTNAGC	3 cut(s)	114, 455, 1889
Bme18I	GGWCC	5 cut(s)	641, 718, 1797, 2032, 2337
BmeT110I	CYCGRG	3 cut(s)	796, 1845, 2242
BmgBI	CACGTC	1 cut(s)	1417
BmsI	GCATC	3 cut(s)	319, 785, 1750
BoxI	GACNNNNGTC	1 cut(s)	2316
BpiI	GAAGAC	1 cut(s)	530
BpmI	CTGGAG	1 cut(s)	85
Bpu10I	CCTNAGC	3 cut(s)	384, 557, 1043
Bpu1102I	GCTNAGC	3 cut(s)	114, 455, 1889
Bpu14I	TTCGAA	1 cut(s)	1208
BpuMI	CCSGG	9 cut(s)	165, 1447, 1768, 1813, 1878, 2037, 2218, 2243, 2244
Bsa29I	ATCGAT	2 cut(s)	863, 1213
BsaAI	YACGTR	1 cut(s)	2170
BsaBI	GATNNNNATC	1 cut(s)	1209
BsaHI	GRCGYC	3 cut(s)	1428, 1611, 1830
BsaI	GGTCTC	2 cut(s)	2133, 2324
BsaWI	WCCGGW	2 cut(s)	951, 1348
BsaXI	ACNNNNNCTCC	8 cut(s)	83, 113, 578, 608, 1967, 1997, 2033, 2063
Bsc4I	CCNNNNNNNGG	9 cut(s)	958, 1112, 1620, 1621, 1716, 1929, 1992, 2264, 2383
Bse118I	RCCGGY	2 cut(s)	32, 951
Bse1I	ACTGG	4 cut(s)	102, 537, 1272, 1916
Bse21I	CCTNAGG	1 cut(s)	683
Bse3DI	GCAATG	2 cut(s)	835, 856
Bse8I	GATNNNNATC	1 cut(s)	1209
BseBI	CCWGG	6 cut(s)	770, 1233, 1655, 1866, 2030, 2366
BseCI	ATCGAT	2 cut(s)	863, 1213
BseJI	GATNNNNATC	1 cut(s)	1209
BseLI	CCNNNNNNNGG	9 cut(s)	958, 1112, 1620, 1621, 1716, 1929, 1992, 2264, 2383
BseMI	GCAATG	2 cut(s)	835, 856
BseMII	CTCAG	9 cut(s)	128, 146, 216, 398, 446, 548, 697, 1034, 1903
BseNI	ACTGG	4 cut(s)	102, 537, 1272, 1916
BsePI	GCGCGC	1 cut(s)	2059
BseRI	GAGGAG	2 cut(s)	1663, 1735
BseSI	GKGCMC	4 cut(s)	733, 1303, 1791, 2259
BseXI	GCAGC	7 cut(s)	688, 760, 979, 1396, 1882, 1899, 2298
Bsh1236I	CGCG	7 cut(s)	1689, 1950, 2061, 2120, 2144, 2251, 2253
Bsh1285I	CGRYCG	1 cut(s)	956
BshNI	GGYRCC	2 cut(s)	1450, 1610
BshTI	ACCGGT	1 cut(s)	951
BshVI	ATCGAT	2 cut(s)	863, 1213
BsiEI	CGRYCG	1 cut(s)	956
BsiHKAI	GWGCWC	7 cut(s)	276, 733, 803, 816, 1303, 1791, 1890
BsiHKCI	CYCGRG	3 cut(s)	796, 1845, 2242
BslFI	GGGAC	7 cut(s)	180, 332, 1664, 1988, 2201, 2216, 2323
BslI	CCNNNNNNNGG	9 cut(s)	958, 1112, 1620, 1621, 1716, 1929, 1992, 2264, 2383
BsmBI	CGTCTC	3 cut(s)	1141, 2053, 2405
BsmFI	GGGAC	7 cut(s)	180, 332, 1664, 1988, 2201, 2216, 2323
Bso31I	GGTCTC	2 cut(s)	2133, 2324
BsoBI	CYCGRG	3 cut(s)	796, 1845, 2242
Bsp119I	TTCGAA	1 cut(s)	1208
Bsp120I	GGGCCC	1 cut(s)	2255
Bsp143I	GATC	7 cut(s)	284, 322, 687, 965, 2094, 2361, 2448
Bsp1720I	GCTNAGC	3 cut(s)	114, 455, 1889
Bsp19I	CCATGG	3 cut(s)	780, 870, 996
BspCNI	CTCAG	9 cut(s)	127, 145, 217, 397, 447, 549, 696, 1033, 1902
BspDI	ATCGAT	2 cut(s)	863, 1213
BspFNI	CGCG	7 cut(s)	1689, 1950, 2061, 2120, 2144, 2251, 2253
BspHI	TCATGA	1 cut(s)	1839
BspPI	GGATC	3 cut(s)	695, 2089, 2356
BspQI	GCTCTTC	2 cut(s)	264, 666
BspT104I	TTCGAA	1 cut(s)	1208
BspT107I	GGYRCC	2 cut(s)	1450, 1610
BspTNI	GGTCTC	2 cut(s)	2133, 2324
BsrBI	CCGCTC	3 cut(s)	584, 793, 2334
BsrDI	GCAATG	2 cut(s)	835, 856
BsrFI	RCCGGY	2 cut(s)	32, 951
BsrI	ACTGG	4 cut(s)	102, 537, 1272, 1916
BssAI	RCCGGY	2 cut(s)	32, 951
BssHII	GCGCGC	1 cut(s)	2059
BssMI	GATC	7 cut(s)	284, 322, 687, 965, 2094, 2361, 2448
BssNI	GRCGYC	3 cut(s)	1428, 1611, 1830
BssSI	CACGAG	1 cut(s)	275
BssT1I	CCWWGG	6 cut(s)	780, 870, 996, 1341, 2022, 2080
Bst2BI	CACGAG	1 cut(s)	275
Bst2UI	CCWGG	6 cut(s)	770, 1233, 1655, 1866, 2030, 2366
Bst6I	CTCTTC	2 cut(s)	264, 666
BstACI	GRCGYC	3 cut(s)	1428, 1611, 1830
BstAPI	GCANNNNNTGC	1 cut(s)	1504
BstBAI	YACGTR	1 cut(s)	2170
BstBI	TTCGAA	1 cut(s)	1208
BstDSI	CCRYGG	4 cut(s)	780, 870, 996, 2397
BstFNI	CGCG	7 cut(s)	1689, 1950, 2061, 2120, 2144, 2251, 2253
BstH2I	RGCGCY	4 cut(s)	410, 1614, 1896, 2207
BstKTI	GATC	7 cut(s)	287, 325, 690, 968, 2097, 2364, 2451
BstMBI	GATC	7 cut(s)	284, 322, 687, 965, 2094, 2361, 2448
BstMCI	CGRYCG	1 cut(s)	956
BstNI	CCWGG	6 cut(s)	770, 1233, 1655, 1866, 2030, 2366
BstNSI	RCATGY	8 cut(s)	97, 595, 1319, 1507, 1544, 1729, 2092, 2112
BstPAI	GACNNNNGTC	1 cut(s)	2316
BstSFI	CTRYAG	2 cut(s)	182, 1468
BstSLI	GKGCMC	4 cut(s)	733, 1303, 1791, 2259
BstUI	CGCG	7 cut(s)	1689, 1950, 2061, 2120, 2144, 2251, 2253
BstV1I	GCAGC	7 cut(s)	688, 760, 979, 1396, 1882, 1899, 2298
BstV2I	GAAGAC	1 cut(s)	530
BstX2I	RGATCY	2 cut(s)	284, 2361
BstXI	CCANNNNNNTGG	2 cut(s)	1279, 2170
BstYI	RGATCY	2 cut(s)	284, 2361
Bsu15I	ATCGAT	2 cut(s)	863, 1213
Bsu36I	CCTNAGG	1 cut(s)	683
BsuTUI	ATCGAT	2 cut(s)	863, 1213
BtgI	CCRYGG	4 cut(s)	780, 870, 996, 2397
BtgZI	GCGATG	2 cut(s)	1965, 2002
BtrI	CACGTC	1 cut(s)	1417
BtsI	GCAGTG	3 cut(s)	43, 1695, 1704
BtsIMutI	CAGTG	8 cut(s)	34, 43, 109, 1257, 1279, 1695, 1704, 2302
CaiI	CAGNNNCTG	1 cut(s)	2365
CciI	TCATGA	1 cut(s)	1839
Cfr10I	RCCGGY	2 cut(s)	32, 951
Cfr9I	CCCGGG	1 cut(s)	2242
ClaI	ATCGAT	2 cut(s)	863, 1213
CpoI	CGGWCCG	1 cut(s)	641
CseI	GACGC	5 cut(s)	535, 1436, 1767, 2035, 2126
Csp6I	GTAC	6 cut(s)	73, 1451, 1516, 1549, 2140, 2436
CspAI	ACCGGT	1 cut(s)	951
CspCI	CAANNNNNGTGG	2 cut(s)	39, 74
CspI	CGGWCCG	1 cut(s)	641
CviQI	GTAC	6 cut(s)	73, 1451, 1516, 1549, 2140, 2436
DinI	GGCGCC	1 cut(s)	1612
DpnI	GATC	7 cut(s)	286, 324, 689, 967, 2096, 2363, 2450
DpnII	GATC	7 cut(s)	284, 322, 687, 965, 2094, 2361, 2448
DrdI	GACNNNNNNGTC	3 cut(s)	1829, 1835, 2401
DseDI	GACNNNNNNGTC	3 cut(s)	1829, 1835, 2401
EaeI	YGGCCR	2 cut(s)	2160, 2385
Eam1104I	CTCTTC	2 cut(s)	264, 666
EarI	CTCTTC	2 cut(s)	264, 666
EciI	GGCGGA	1 cut(s)	2182
Ecl136II	GAGCTC	2 cut(s)	801, 814
Eco130I	CCWWGG	6 cut(s)	780, 870, 996, 1341, 2022, 2080
Eco147I	AGGCCT	1 cut(s)	931
Eco24I	GRGCYC	5 cut(s)	803, 816, 1035, 2249, 2259
Eco31I	GGTCTC	2 cut(s)	2133, 2324
Eco47I	GGWCC	5 cut(s)	641, 718, 1797, 2032, 2337
Eco47III	AGCGCT	2 cut(s)	408, 1894
Eco53kI	GAGCTC	2 cut(s)	801, 814
Eco57I	CTGAAG	1 cut(s)	1751
Eco72I	CACGTG	1 cut(s)	2170
Eco81I	CCTNAGG	1 cut(s)	683
Eco88I	CYCGRG	3 cut(s)	796, 1845, 2242
EcoICRI	GAGCTC	2 cut(s)	801, 814
EcoO109I	RGGNCCY	3 cut(s)	785, 2032, 2337
EcoRII	CCWGG	6 cut(s)	768, 1231, 1653, 1864, 2028, 2364
EcoT14I	CCWWGG	6 cut(s)	780, 870, 996, 1341, 2022, 2080
EcoT22I	ATGCAT	2 cut(s)	1317, 2114
EcoT38I	GRGCYC	5 cut(s)	803, 816, 1035, 2249, 2259
EgeI	GGCGCC	1 cut(s)	1612
EheI	GGCGCC	1 cut(s)	1612
ErhI	CCWWGG	6 cut(s)	780, 870, 996, 1341, 2022, 2080
Esp3I	CGTCTC	3 cut(s)	1141, 2053, 2405
FaqI	GGGAC	7 cut(s)	180, 332, 1664, 1988, 2201, 2216, 2323
FauI	CCCGC	5 cut(s)	242, 1694, 2177, 2246, 2327
FblI	GTMKAC	2 cut(s)	1781, 1821
FriOI	GRGCYC	5 cut(s)	803, 816, 1035, 2249, 2259
FspBI	CTAG	9 cut(s)	480, 668, 749, 933, 947, 977, 1149, 1290, 1856
GsuI	CTGGAG	1 cut(s)	85
HaeII	RGCGCY	4 cut(s)	410, 1614, 1896, 2207
HgaI	GACGC	5 cut(s)	535, 1436, 1767, 2035, 2126
Hin1I	GRCGYC	3 cut(s)	1428, 1611, 1830
HincII	GTYRAC	6 cut(s)	1414, 1426, 1782, 1822, 2152, 2311
HindII	GTYRAC	6 cut(s)	1414, 1426, 1782, 1822, 2152, 2311
HinfI	GANTC	9 cut(s)	54, 168, 598, 1154, 1205, 1210, 1843, 2189, 2402
HphI	GGTGA	2 cut(s)	2380, 2428
Hpy188I	TCNGA	7 cut(s)	581, 818, 1023, 1141, 1648, 1746, 2361
Hpy99I	CGWCG	5 cut(s)	1783, 1786, 1826, 2318, 2386
HpyAV	CCTTC	7 cut(s)	249, 456, 700, 1049, 1491, 1643, 1710
HpyCH4IV	ACGT	4 cut(s)	1416, 1830, 2169, 2354
HpySE526I	ACGT	4 cut(s)	1416, 1830, 2169, 2354
Hsp92I	GRCGYC	3 cut(s)	1428, 1611, 1830
KasI	GGCGCC	1 cut(s)	1610
KflI	GGGWCCC	1 cut(s)	2337
KpnI	GGTACC	1 cut(s)	1454
KroI	GCCGGC	1 cut(s)	32
KroNI	GCCGGC	1 cut(s)	34
Kzo9I	GATC	7 cut(s)	284, 322, 687, 965, 2094, 2361, 2448
LguI	GCTCTTC	2 cut(s)	264, 666
Lsp1109I	GCAGC	7 cut(s)	688, 760, 979, 1396, 1882, 1899, 2298
LweI	GCATC	3 cut(s)	319, 785, 1750
MaeI	CTAG	9 cut(s)	480, 668, 749, 933, 947, 977, 1149, 1290, 1856
MaeII	ACGT	4 cut(s)	1416, 1830, 2169, 2354
MaeIII	GTNAC	8 cut(s)	127, 211, 293, 365, 937, 1436, 1525, 2279
MalI	GATC	7 cut(s)	286, 324, 689, 967, 2096, 2363, 2450
MbiI	CCGCTC	3 cut(s)	584, 793, 2334
MboI	GATC	7 cut(s)	284, 322, 687, 965, 2094, 2361, 2448
MboII	GAAGA	5 cut(s)	281, 370, 535, 683, 2458
MfeI	CAATTG	1 cut(s)	2226
MflI	RGATCY	2 cut(s)	284, 2361
MluCI	AATT	9 cut(s)	229, 491, 621, 648, 743, 1004, 1096, 1363, 2226
Mly113I	GGCGCC	1 cut(s)	1611
MlyI	GAGTC	5 cut(s)	162, 1163, 1837, 2183, 2411
MmeI	TCCRAC	2 cut(s)	1200, 2010
Mph1103I	ATGCAT	2 cut(s)	1317, 2114
MroNI	GCCGGC	1 cut(s)	32
MroXI	GAANNNNTTC	1 cut(s)	1130
MseI	TTAA	4 cut(s)	468, 1011, 1181, 1589
MslI	CAYNNNNRTG	4 cut(s)	432, 1262, 1664, 2168
MspA1I	CMGCKG	3 cut(s)	335, 1713, 2289
MunI	CAATTG	1 cut(s)	2226
MvaI	CCWGG	6 cut(s)	770, 1233, 1655, 1866, 2030, 2366
MvnI	CGCG	7 cut(s)	1689, 1950, 2061, 2120, 2144, 2251, 2253
NaeI	GCCGGC	1 cut(s)	34
NarI	GGCGCC	1 cut(s)	1611
NciI	CCSGG	9 cut(s)	165, 1447, 1768, 1813, 1878, 2037, 2218, 2243, 2244
NcoI	CCATGG	3 cut(s)	780, 870, 996
NdeII	GATC	7 cut(s)	284, 322, 687, 965, 2094, 2361, 2448
NgoMIV	GCCGGC	1 cut(s)	32
NmuCI	GTSAC	6 cut(s)	127, 211, 293, 937, 1436, 2279
NsiI	ATGCAT	2 cut(s)	1317, 2114
NspI	RCATGY	8 cut(s)	97, 595, 1319, 1507, 1544, 1729, 2092, 2112
NspV	TTCGAA	1 cut(s)	1208
OliI	CACNNNNGTG	1 cut(s)	1262
PaeI	GCATGC	4 cut(s)	1319, 1544, 1729, 2092
PagI	TCATGA	1 cut(s)	1839
PauI	GCGCGC	1 cut(s)	2059
PceI	AGGCCT	1 cut(s)	931
PciI	ACATGT	1 cut(s)	591
PciSI	GCTCTTC	2 cut(s)	264, 666
PcsI	WCGNNNNNNNCGW	3 cut(s)	1395, 1827, 1866
PdiI	GCCGGC	1 cut(s)	34
PdmI	GAANNNNTTC	1 cut(s)	1130
PfeI	GAWTC	4 cut(s)	54, 598, 1205, 1210
PfoI	TCCNGGA	1 cut(s)	163
PinAI	ACCGGT	1 cut(s)	951
PleI	GAGTC	5 cut(s)	162, 1162, 1837, 2183, 2410
PluTI	GGCGCC	1 cut(s)	1614
PmaCI	CACGTG	1 cut(s)	2170
PmlI	CACGTG	1 cut(s)	2170
PpsI	GAGTC	5 cut(s)	162, 1162, 1837, 2183, 2410
Ppu21I	YACGTR	1 cut(s)	2170
PpuMI	RGGWCCY	2 cut(s)	2032, 2337
PscI	ACATGT	1 cut(s)	591
PshAI	GACNNNNGTC	1 cut(s)	2316
Psp124BI	GAGCTC	2 cut(s)	803, 816
Psp5II	RGGWCCY	2 cut(s)	2032, 2337
Psp6I	CCWGG	6 cut(s)	768, 1231, 1653, 1864, 2028, 2364
PspCI	CACGTG	1 cut(s)	2170
PspGI	CCWGG	6 cut(s)	768, 1231, 1653, 1864, 2028, 2364
PspOMI	GGGCCC	1 cut(s)	2255
PspPPI	RGGWCCY	2 cut(s)	2032, 2337
PstNI	CAGNNNCTG	1 cut(s)	2365
PsuI	RGATCY	2 cut(s)	284, 2361
PteI	GCGCGC	1 cut(s)	2059
RsaI	GTAC	6 cut(s)	74, 1452, 1517, 1550, 2141, 2437
RsaNI	GTAC	6 cut(s)	73, 1451, 1516, 1549, 2140, 2436
RseI	CAYNNNNRTG	4 cut(s)	432, 1262, 1664, 2168
Rsr2I	CGGWCCG	1 cut(s)	641
RsrII	CGGWCCG	1 cut(s)	641
SacI	GAGCTC	2 cut(s)	803, 816
SalI	GTCGAC	2 cut(s)	1780, 1820
SapI	GCTCTTC	2 cut(s)	264, 666
SaqAI	TTAA	4 cut(s)	468, 1011, 1181, 1589
Sau3AI	GATC	7 cut(s)	284, 322, 687, 965, 2094, 2361, 2448
SchI	GAGTC	5 cut(s)	162, 1163, 1837, 2183, 2411
SfaNI	GCATC	3 cut(s)	319, 785, 1750
SfcI	CTRYAG	2 cut(s)	182, 1468
SfoI	GGCGCC	1 cut(s)	1612
SfuI	TTCGAA	1 cut(s)	1208
SgrDI	CGTCGACG	1 cut(s)	1780
SinI	GGWCC	5 cut(s)	641, 718, 1797, 2032, 2337
SmaI	CCCGGG	1 cut(s)	2244
SmiMI	CAYNNNNRTG	4 cut(s)	432, 1262, 1664, 2168
SphI	GCATGC	4 cut(s)	1319, 1544, 1729, 2092
SrfI	GCCCGGGC	1 cut(s)	2244
Sse9I	AATT	9 cut(s)	229, 491, 621, 648, 743, 1004, 1096, 1363, 2226
SseBI	AGGCCT	1 cut(s)	931
SspDI	GGCGCC	1 cut(s)	1610
SspMI	CTAG	9 cut(s)	480, 668, 749, 933, 947, 977, 1149, 1290, 1856
SstI	GAGCTC	2 cut(s)	803, 816
StuI	AGGCCT	1 cut(s)	931
StyI	CCWWGG	6 cut(s)	780, 870, 996, 1341, 2022, 2080
TaiI	ACGT	4 cut(s)	1419, 1833, 2172, 2357
TaqI	TCGA	9 cut(s)	596, 690, 700, 863, 956, 1208, 1213, 1781, 1821
TaqII	GACCGA	2 cut(s)	735, 1894
TasI	AATT	9 cut(s)	229, 491, 621, 648, 743, 1004, 1096, 1363, 2226
TauI	GCSGC	5 cut(s)	335, 1876, 2123, 2292, 2459
TfiI	GAWTC	4 cut(s)	54, 598, 1205, 1210
Tru1I	TTAA	4 cut(s)	468, 1011, 1181, 1589
Tru9I	TTAA	4 cut(s)	468, 1011, 1181, 1589
TscAI	CASTG	8 cut(s)	34, 43, 109, 1264, 1279, 1702, 1711, 2302
TseFI	GTSAC	6 cut(s)	127, 211, 293, 937, 1436, 2279
TseI	GCWGC	7 cut(s)	676, 773, 992, 1384, 1895, 1912, 2286
Tsp45I	GTSAC	6 cut(s)	127, 211, 293, 937, 1436, 2279
TspDTI	ATGAA	5 cut(s)	536, 753, 1017, 1478, 2192
TspGWI	ACGGA	6 cut(s)	60, 1040, 1361, 1424, 1666, 1766
TspMI	CCCGGG	1 cut(s)	2242
TspRI	CASTG	8 cut(s)	34, 43, 109, 1264, 1279, 1702, 1711, 2302
VneI	GTGCAC	3 cut(s)	729, 1299, 1787
VpaK11BI	GGWCC	5 cut(s)	641, 718, 1797, 2032, 2337
XapI	RAATTY	3 cut(s)	491, 743, 1096
XbaI	TCTAGA	1 cut(s)	976
XceI	RCATGY	8 cut(s)	97, 595, 1319, 1507, 1544, 1729, 2092, 2112
XcmI	CCANNNNNNNNNTGG	3 cut(s)	766, 1003, 2395
XmaI	CCCGGG	1 cut(s)	2242
XmiI	GTMKAC	2 cut(s)	1781, 1821
XmnI	GAANNNNTTC	1 cut(s)	1130
XspI	CTAG	9 cut(s)	480, 668, 749, 933, 947, 977, 1149, 1290, 1856
ZraI	GACGTC	1 cut(s)	1831
Zsp2I	ATGCAT	2 cut(s)	1317, 2114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.