Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005118.1

Orthogroup ID

OG0008368

Physical Location & Seq

Genomic Coordinates Reverse (-)

10617 .. 15505

Gene Structure 4889 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005118.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

atgagttttgggggttttcttgacagtagtaccggcagtagtggcggtgcaagaatcgtcgctgatattccttacaacaacaaccaccaccaccaccaccaccacaacgccaaccacaccagtatgccctctagtgcaatcgctcagcctcgactcgtgactcagtctctcaccaaatcaatgttcaacaactcaccaggcctctcactcgctcttcagactaatgccgacggaggcggagacgcgccgagaatgcctgagaatttcgagccgaataataacgtcggcgggcggaggagccgggaggaggagaacgagatcagtagatctggcagcgataacatggacggcgccggctccggcgacgaaggagacgccgcggataacagcaaccctcgtaagaagaagagataccaccgacacaccccgcagcaaatccaagagctcgaagcgttattcaaggagtgccctcatcctgatgagaagcaaaggttggagcttagcagaaggctaaatcttgagacccggcaagtcaagttctggttccaaaatcgccgaacccagatgaagactcaacttgaacggcatgagaactctttgctgaggcaagagaacgataagcttcgagccgaaaacatgtccatcagggatgccatgaggaacccaatttgcacaaactgcggcggtccggccatgataggcgatatttctattgaagagcaacatctcaggattgacaatgcccgattaaaggacgagttagaccgggtttgtgcacttgccggcaagttcttgggccgcccaatttcgtctctaggtccatcaatggggcctccactgccgagttcagctctagaactcggagttgggaacaatgggttcggtgggatgagctcagttgctacaacaatgccattgggacctgatttcggggcggggcttggaggtggcatgccgattgtggctcacactaggccggtggcgggagggctcgacgagaggactatgtttttggagctagctttggccgccatggatgagcttgtgaagctggctcagactgatgagctttggctgaggagcttggaaggtgggagagaggtgctgaatcacgaggagtacatgaggagtttcacgccttgcattgggttgaagcctaatggctttgttaccgaggcttctagggagactggtatggtcatcatcaacagtttggctctggttgagactctgatggactcgaatcgatggttggagatgtttccttgtatgattgccagaacttctaccactgatgtgatttccagcggtatgggagggactagaaatggtgcacttcaactgatgcatgctgagcttcaagtcctatcgcctttggttccagtccgtgaggtcaacttcctccgcttctgcaagcagcacgccgagggtgtgtgggcggtggtggatgtgtccgtcgacacaatcagagacaattctggtgcacccacatttgtaaactgcaggaggctcccttctggctgtgttgtacaagatatgcctaatggttactccaaggttacatgggttgagcatgcagagtacgacgagagccaagtccaccacctgtaccgacccttgttaagttccggcatggggttcggcgcgcagaggtgggtcgccaccctccagcgccaatgccagtgcctcgctatcctcatgtcctccacggtcccggcccgcgaccacgccaataccatcactcagagcgggaggaagagcatgttgaagctggcgcagcgaatgactgacaacttctgcgccggggtctgcgcctcgacggtccacaaatggaacaagctgcacgccggcaacgtggacgaggacgtccgctacatgaccagagagagcatggacgaccccggcgagccgccgggcattgtgctcagcgctgccacttcggtctggctcccagtctccccacaaagactcttcaatttcttgcgcgacgagcgactcaggagcgagtgggacatcctctccaacggtgggcccatgcaggagatggcccacatcgccaagggccaggaccaaggcaactgcgtctccctcctccgcgccagagccatgaacgcaaaccaaaacagcatgctgatattacaagagacgtgcatcgacgcggccgggtcgcttgtggtgtacgcgccggtggatattcctgccatgcacgtggtgatgaacggaggggactcggcctacgtggcgctgctgccgtcggggttcgcgatagtcccggacgggccgggctcgcgtggttcggaggccaaggcgggccagggcagcagcaacggcggcggcggggaggccagggtgagtgggtcactgttaacgatgacgtttcagatattggtcaacagtctgccgtcggcgaagttgaccgtggagtcggtggagactgtcaacaatctcatctcctgcaccgttcagaagatcaaggccgcgctccagtgcgagagctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042335 GO:0042545 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0045229 GO:0045595 GO:0045596 GO:0048364 GO:0048367 GO:0048437 GO:0048468 GO:0048469 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090627 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

832

Amino Acids

90.57

Weight (kDa)

6.11

Isoelectric Point (pI)

48.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61150 AT4G00730 AT4G00730
fragaria_vesca	FvH4_7g13350 FvH4_7g13350
malus_domestica	MD01G1050200.v1.1 MD07G1127600.v1.1
prunus_persica	Prupe.2G156900_v2.0.a1 Prupe.2G156900_v2.0.a1
pyrus_communis	pycom01g07490 pycom07g12270
rosa_chinensis	RchiOBHm_Chr1g0352671
rosa_laevigata	RLG00000028322
rosa_multiflora	Rmu_co8513183.1_g000001 Rmu_sc0005118.1_g000003
rosa_roxburghii	Rroxscaffold_4G00302500
rosa_rugosa	Rorug01G0230700 Rorug01G0230800 Rorug01G0230900
rosa_samantha	Rh1AG243900 Rh1BG214500 Rh1CG227900 Rh1DG240600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1865, 2422
AatII	GACGTC	1 cut(s)	1869
AccB1I	GGYRCC	1 cut(s)	350
AccBSI	CCGCTC	1 cut(s)	1749
AccI	GTMKAC	1 cut(s)	1458
AcoI	YGGCCR	3 cut(s)	690, 1026, 2160
AcsI	RAATTY	1 cut(s)	262
AcuI	CTGAAG	1 cut(s)	200
AcvI	CACGTG	1 cut(s)	2209
AcyI	GRCGYC	3 cut(s)	351, 375, 1866
AdeI	CACNNNGTG	1 cut(s)	2212
AfaI	GTAC	6 cut(s)	31, 1121, 1530, 1583, 1610, 2180
AfeI	AGCGCT	1 cut(s)	1930
AfiI	CCNNNNNNNGG	8 cut(s)	307, 751, 827, 929, 983, 1145, 1635, 2028
AflIII	ACRYGT	1 cut(s)	636
AgsI	TTSAA	9 cut(s)	187, 460, 581, 716, 1153, 1340, 1361, 1768, 1975
AjiI	CACGTC	1 cut(s)	2148
AjnI	CCWGG	4 cut(s)	196, 2064, 2313, 2345
AjuI	GAANNNNNNNTTGG	8 cut(s)	167, 199, 476, 508, 849, 881, 1235, 1267
AleI	CACNNNNGTG	1 cut(s)	1295
Alw21I	GWGCWC	6 cut(s)	447, 778, 896, 1336, 1486, 1926
Alw44I	GTGCAC	3 cut(s)	774, 1332, 1482
Aor51HI	AGCGCT	1 cut(s)	1930
ApaI	GGGCCC	1 cut(s)	2034
ApaLI	GTGCAC	3 cut(s)	774, 1332, 1482
ApoI	RAATTY	1 cut(s)	262
ArsI	GACNNNNNNTTYG	2 cut(s)	994, 1026
AsuHPI	GGTGA	4 cut(s)	163, 186, 2224, 2362
AsuNHI	GCTAGC	1 cut(s)	1018
AvaII	GGWCC	6 cut(s)	686, 818, 920, 1711, 1822, 2068
BaeGI	GKGCMC	5 cut(s)	470, 778, 1336, 1486, 2034
BaeI	ACNNNNGTAYC	2 cut(s)	13, 46
BanI	GGYRCC	1 cut(s)	350
BanII	GRGCYC	5 cut(s)	447, 896, 993, 2034, 2288
BarI	GAAGNNNNNNTAC	2 cut(s)	395, 427
BauI	CACGAG	2 cut(s)	155, 1112
BbrPI	CACGTG	1 cut(s)	2209
BbsI	GAAGAC	1 cut(s)	575
Bbv12I	GWGCWC	6 cut(s)	447, 778, 896, 1336, 1486, 1926
BbvCI	CCTCAGC	2 cut(s)	602, 1076
BccI	CCATC	6 cut(s)	650, 829, 1228, 1242, 1745, 2038
BceAI	ACGGC	5 cut(s)	364, 599, 2236, 2344, 2386
BcgI	CGANNNNNNTGC	2 cut(s)	1621, 1655
BciT130I	CCWGG	4 cut(s)	198, 2066, 2315, 2347
BfaI	CTAG	7 cut(s)	132, 815, 854, 972, 1019, 1182, 1323
BfmI	CTRYAG	1 cut(s)	1501
BfoI	RGCGCY	4 cut(s)	354, 1675, 1932, 2246
BglI	GCCNNNNNGGC	1 cut(s)	2240
BglII	AGATCT	1 cut(s)	326
BlpI	GCTNAGC	4 cut(s)	144, 500, 1353, 1925
Bme18I	GGWCC	6 cut(s)	686, 818, 920, 1711, 1822, 2068
BmgBI	CACGTC	1 cut(s)	2148
BmrI	ACTGGG	1 cut(s)	1946
BmsI	GCATC	3 cut(s)	640, 1335, 2160
BmtI	GCTAGC	1 cut(s)	1022
BmuI	ACTGGG	1 cut(s)	1946
BpiI	GAAGAC	1 cut(s)	575
BplI	GAGNNNNNCTC	2 cut(s)	835, 867
BpmI	CTGGAG	2 cut(s)	1652, 2468
Bpu10I	CCTNAGC	2 cut(s)	602, 1076
Bpu1102I	GCTNAGC	4 cut(s)	144, 500, 1353, 1925
BpuEI	CTTGAG	1 cut(s)	539
Bsa29I	ATCGAT	1 cut(s)	1246
BsaAI	YACGTR	2 cut(s)	2209, 2239
BsaHI	GRCGYC	3 cut(s)	351, 375, 1866
BsaI	GGTCTC	1 cut(s)	515
BsaXI	ACNNNNNCTCC	4 cut(s)	2003, 2033, 2069, 2099
Bsc4I	CCNNNNNNNGG	8 cut(s)	307, 751, 827, 929, 983, 1145, 1635, 2028
Bse118I	RCCGGY	6 cut(s)	32, 353, 782, 976, 1847, 2185
Bse1I	ACTGG	6 cut(s)	120, 1195, 1382, 1681, 1952, 2485
BseBI	CCWGG	4 cut(s)	198, 2066, 2315, 2347
BseCI	ATCGAT	1 cut(s)	1246
BseGI	GGATG	6 cut(s)	472, 655, 894, 1042, 1453, 2013
BseLI	CCNNNNNNNGG	8 cut(s)	307, 751, 827, 929, 983, 1145, 1635, 2028
BseNI	ACTGG	6 cut(s)	120, 1195, 1382, 1681, 1952, 2485
BsePI	GCGCGC	1 cut(s)	1644
BseRI	GAGGAG	7 cut(s)	310, 320, 323, 1093, 1130, 1141, 2081
BseSI	GKGCMC	5 cut(s)	470, 778, 1336, 1486, 2034
BseX3I	CGGCCG	1 cut(s)	2160
BsgI	GTGCAG	2 cut(s)	1826, 2440
Bsh1285I	CGRYCG	1 cut(s)	2163
BshNI	GGYRCC	1 cut(s)	350
BshVI	ATCGAT	1 cut(s)	1246
BsiEI	CGRYCG	1 cut(s)	2163
BsiHKAI	GWGCWC	6 cut(s)	447, 778, 896, 1336, 1486, 1926
BslFI	GGGAC	6 cut(s)	933, 1333, 1697, 2024, 2240, 2255
BslI	CCNNNNNNNGG	8 cut(s)	307, 751, 827, 929, 983, 1145, 1635, 2028
BsmBI	CGTCTC	5 cut(s)	234, 366, 816, 2089, 2138
BsmFI	GGGAC	6 cut(s)	933, 1333, 1697, 2024, 2240, 2255
BsmI	GAATGC	1 cut(s)	258
Bso31I	GGTCTC	1 cut(s)	515
Bsp120I	GGGCCC	1 cut(s)	2030
Bsp1407I	TGTACA	1 cut(s)	1528
Bsp143I	GATC	3 cut(s)	318, 326, 2469
Bsp1720I	GCTNAGC	4 cut(s)	144, 500, 1353, 1925
Bsp19I	CCATGG	1 cut(s)	1032
Bsp68I	TCGCGA	1 cut(s)	2264
BspDI	ATCGAT	1 cut(s)	1246
BspMAI	CTGCAG	1 cut(s)	1505
BspOI	GCTAGC	1 cut(s)	1022
BspQI	GCTCTTC	3 cut(s)	219, 711, 1751
BspT107I	GGYRCC	1 cut(s)	350
BspTNI	GGTCTC	1 cut(s)	515
BsrBI	CCGCTC	1 cut(s)	1749
BsrFI	RCCGGY	6 cut(s)	32, 353, 782, 976, 1847, 2185
BsrGI	TGTACA	1 cut(s)	1528
BsrI	ACTGG	6 cut(s)	120, 1195, 1382, 1681, 1952, 2485
BssAI	RCCGGY	6 cut(s)	32, 353, 782, 976, 1847, 2185
BssHII	GCGCGC	1 cut(s)	1644
BssMI	GATC	3 cut(s)	318, 326, 2469
BssNI	GRCGYC	3 cut(s)	351, 375, 1866
BssSI	CACGAG	2 cut(s)	155, 1112
BssT1I	CCWWGG	5 cut(s)	1032, 1554, 2058, 2071, 2304
Bst2BI	CACGAG	2 cut(s)	155, 1112
Bst2UI	CCWGG	4 cut(s)	198, 2066, 2315, 2347
Bst6I	CTCTTC	5 cut(s)	219, 401, 711, 1751, 1976
BstACI	GRCGYC	3 cut(s)	351, 375, 1866
BstAPI	GCANNNNNTGC	1 cut(s)	678
BstAUI	TGTACA	1 cut(s)	1528
BstBAI	YACGTR	2 cut(s)	2209, 2239
BstDSI	CCRYGG	4 cut(s)	378, 1032, 1707, 2418
BstF5I	GGATG	6 cut(s)	472, 655, 894, 1042, 1453, 2013
BstH2I	RGCGCY	4 cut(s)	354, 1675, 1932, 2246
BstKTI	GATC	3 cut(s)	321, 329, 2472
BstMBI	GATC	3 cut(s)	318, 326, 2469
BstMCI	CGRYCG	1 cut(s)	2163
BstNI	CCWGG	4 cut(s)	198, 2066, 2315, 2347
BstNSI	RCATGY	6 cut(s)	640, 955, 1352, 1577, 1765, 2131
BstSFI	CTRYAG	1 cut(s)	1501
BstSLI	GKGCMC	5 cut(s)	470, 778, 1336, 1486, 2034
BstV2I	GAAGAC	1 cut(s)	575
BstX2I	RGATCY	1 cut(s)	326
BstXI	CCANNNNNNTGG	2 cut(s)	1312, 2209
BstYI	RGATCY	1 cut(s)	326
BstZI	CGGCCG	1 cut(s)	2160
Bsu15I	ATCGAT	1 cut(s)	1246
BsuTUI	ATCGAT	1 cut(s)	1246
BtgI	CCRYGG	4 cut(s)	378, 1032, 1707, 2418
BtgZI	GCGATG	1 cut(s)	2038
BtrI	CACGTC	1 cut(s)	2148
BtsCI	GGATG	6 cut(s)	472, 655, 894, 1042, 1453, 2013
BtsI	GCAGTG	1 cut(s)	836
BtsIMutI	CAGTG	5 cut(s)	836, 1290, 1688, 2360, 2492
BtuMI	TCGCGA	1 cut(s)	2264
Cfr10I	RCCGGY	6 cut(s)	32, 353, 782, 976, 1847, 2185
Cfr42I	CCGCGG	1 cut(s)	381
ClaI	ATCGAT	1 cut(s)	1246
CpoI	CGGWCCG	1 cut(s)	686
CseI	GACGC	4 cut(s)	251, 383, 2071, 2165
Csp6I	GTAC	6 cut(s)	30, 1120, 1529, 1582, 1609, 2179
CspI	CGGWCCG	1 cut(s)	686
CviQI	GTAC	6 cut(s)	30, 1120, 1529, 1582, 1609, 2179
DinI	GGCGCC	1 cut(s)	352
DpnI	GATC	3 cut(s)	320, 328, 2471
DpnII	GATC	3 cut(s)	318, 326, 2469
DraIII	CACNNNGTG	1 cut(s)	2212
DrdI	GACNNNNNNGTC	2 cut(s)	1865, 2422
DseDI	GACNNNNNNGTC	2 cut(s)	1865, 2422
EaeI	YGGCCR	3 cut(s)	690, 1026, 2160
EagI	CGGCCG	1 cut(s)	2160
Eam1104I	CTCTTC	5 cut(s)	219, 401, 711, 1751, 1976
EarI	CTCTTC	5 cut(s)	219, 401, 711, 1751, 1976
EciI	GGCGGA	2 cut(s)	252, 307
Ecl136II	GAGCTC	2 cut(s)	445, 894
EclXI	CGGCCG	1 cut(s)	2160
Eco130I	CCWWGG	5 cut(s)	1032, 1554, 2058, 2071, 2304
Eco147I	AGGCCT	1 cut(s)	201
Eco24I	GRGCYC	5 cut(s)	447, 896, 993, 2034, 2288
Eco31I	GGTCTC	1 cut(s)	515
Eco47I	GGWCC	6 cut(s)	686, 818, 920, 1711, 1822, 2068
Eco47III	AGCGCT	1 cut(s)	1930
Eco52I	CGGCCG	1 cut(s)	2160
Eco53kI	GAGCTC	2 cut(s)	445, 894
Eco57I	CTGAAG	1 cut(s)	200
Eco72I	CACGTG	1 cut(s)	2209
EcoICRI	GAGCTC	2 cut(s)	445, 894
EcoO109I	RGGNCCY	2 cut(s)	830, 920
EcoRII	CCWGG	4 cut(s)	196, 2064, 2313, 2345
EcoT14I	CCWWGG	5 cut(s)	1032, 1554, 2058, 2071, 2304
EcoT22I	ATGCAT	1 cut(s)	1350
EcoT38I	GRGCYC	5 cut(s)	447, 896, 993, 2034, 2288
EgeI	GGCGCC	1 cut(s)	352
EheI	GGCGCC	1 cut(s)	352
ErhI	CCWWGG	5 cut(s)	1032, 1554, 2058, 2071, 2304
Esp3I	CGTCTC	5 cut(s)	234, 366, 816, 2089, 2138
FaqI	GGGAC	6 cut(s)	933, 1333, 1697, 2024, 2240, 2255
FauI	CCCGC	8 cut(s)	281, 435, 928, 976, 1727, 1742, 2302, 2330
FblI	GTMKAC	1 cut(s)	1458
FokI	GGATG	6 cut(s)	459, 662, 901, 1049, 1460, 2000
FriOI	GRGCYC	5 cut(s)	447, 896, 993, 2034, 2288
FspBI	CTAG	7 cut(s)	132, 815, 854, 972, 1019, 1182, 1323
GsuI	CTGGAG	2 cut(s)	1652, 2468
HaeII	RGCGCY	4 cut(s)	354, 1675, 1932, 2246
HgaI	GACGC	4 cut(s)	251, 383, 2071, 2165
Hin1I	GRCGYC	3 cut(s)	351, 375, 1866
HincII	GTYRAC	6 cut(s)	1396, 1459, 2367, 2392, 2415, 2440
HindII	GTYRAC	6 cut(s)	1396, 1459, 2367, 2392, 2415, 2440
HindIII	AAGCTT	1 cut(s)	620
HpaI	GTTAAC	1 cut(s)	2367
HphI	GGTGA	4 cut(s)	163, 186, 2224, 2362
Hpy188I	TCNGA	9 cut(s)	219, 863, 1059, 1233, 1469, 1746, 2299, 2382, 2466
Hpy188III	TCNNGA	9 cut(s)	20, 157, 476, 518, 730, 854, 1112, 1999, 2263
HpyAV	CCTTC	4 cut(s)	362, 501, 1082, 1524
HpyCH4IV	ACGT	7 cut(s)	282, 1854, 1866, 2147, 2208, 2238, 2375
HpySE526I	ACGT	7 cut(s)	282, 1854, 1866, 2147, 2208, 2238, 2375
Hsp92I	GRCGYC	3 cut(s)	351, 375, 1866
KasI	GGCGCC	1 cut(s)	350
KroI	GCCGGC	3 cut(s)	353, 782, 1847
KroNI	GCCGGC	3 cut(s)	355, 784, 1849
KspAI	GTTAAC	1 cut(s)	2367
KspI	CCGCGG	1 cut(s)	381
Kzo9I	GATC	3 cut(s)	318, 326, 2469
LguI	GCTCTTC	3 cut(s)	219, 711, 1751
LmnI	GCTCC	9 cut(s)	297, 362, 496, 1015, 1080, 1515, 1953, 2001, 2487
LweI	GCATC	3 cut(s)	640, 1335, 2160
MaeI	CTAG	7 cut(s)	132, 815, 854, 972, 1019, 1182, 1323
MaeII	ACGT	7 cut(s)	282, 1854, 1866, 2147, 2208, 2238, 2375
MaeIII	GTNAC	5 cut(s)	157, 1168, 1547, 1558, 2358
MalI	GATC	3 cut(s)	320, 328, 2471
MbiI	CCGCTC	1 cut(s)	1749
MboI	GATC	3 cut(s)	318, 326, 2469
MboII	GAAGA	8 cut(s)	206, 415, 418, 580, 728, 1768, 1963, 2479
MflI	RGATCY	1 cut(s)	326
MluCI	AATT	5 cut(s)	262, 666, 804, 1474, 1975
Mly113I	GGCGCC	1 cut(s)	351
MlyI	GAGTC	9 cut(s)	147, 154, 565, 1222, 1232, 1962, 1989, 2222, 2432
MmeI	TCCRAC	3 cut(s)	474, 1233, 2046
Mph1103I	ATGCAT	1 cut(s)	1350
MroNI	GCCGGC	3 cut(s)	353, 782, 1847
MseI	TTAA	3 cut(s)	749, 1622, 2366
MslI	CAYNNNNRTG	4 cut(s)	122, 477, 1295, 2207
MspA1I	CMGCKG	2 cut(s)	380, 1308
Mva1269I	GAATGC	1 cut(s)	258
MvaI	CCWGG	4 cut(s)	198, 2066, 2315, 2347
NaeI	GCCGGC	3 cut(s)	355, 784, 1849
NarI	GGCGCC	1 cut(s)	351
NcoI	CCATGG	1 cut(s)	1032
NdeII	GATC	3 cut(s)	318, 326, 2469
NgoMIV	GCCGGC	3 cut(s)	353, 782, 1847
NheI	GCTAGC	1 cut(s)	1018
NmeAIII	GCCGAG	4 cut(s)	273, 867, 1450, 2210
NmuCI	GTSAC	2 cut(s)	157, 2358
NruI	TCGCGA	1 cut(s)	2264
NsiI	ATGCAT	1 cut(s)	1350
NspI	RCATGY	6 cut(s)	640, 955, 1352, 1577, 1765, 2131
OliI	CACNNNNGTG	1 cut(s)	1295
PaeI	GCATGC	4 cut(s)	955, 1352, 1577, 2131
PauI	GCGCGC	1 cut(s)	1644
PceI	AGGCCT	1 cut(s)	201
PciI	ACATGT	1 cut(s)	636
PciSI	GCTCTTC	3 cut(s)	219, 711, 1751
PcsI	WCGNNNNNNNCGW	3 cut(s)	1851, 1902, 2261
PctI	GAATGC	1 cut(s)	258
PdiI	GCCGGC	3 cut(s)	355, 784, 1849
PfeI	GAWTC	3 cut(s)	54, 1108, 1243
PflFI	GACNNNGTC	1 cut(s)	163
PfoI	TCCNGGA	1 cut(s)	2271
PleI	GAGTC	9 cut(s)	147, 154, 565, 1222, 1232, 1962, 1989, 2222, 2431
PluTI	GGCGCC	1 cut(s)	354
PmaCI	CACGTG	1 cut(s)	2209
PmlI	CACGTG	1 cut(s)	2209
PpsI	GAGTC	9 cut(s)	147, 154, 565, 1222, 1232, 1962, 1989, 2222, 2431
Ppu21I	YACGTR	2 cut(s)	2209, 2239
PpuMI	RGGWCCY	1 cut(s)	920
PscI	ACATGT	1 cut(s)	636
Psp124BI	GAGCTC	2 cut(s)	447, 896
Psp5II	RGGWCCY	1 cut(s)	920
Psp6I	CCWGG	4 cut(s)	196, 2064, 2313, 2345
PspCI	CACGTG	1 cut(s)	2209
PspGI	CCWGG	4 cut(s)	196, 2064, 2313, 2345
PspOMI	GGGCCC	1 cut(s)	2030
PspPPI	RGGWCCY	1 cut(s)	920
PstI	CTGCAG	1 cut(s)	1505
PsuI	RGATCY	1 cut(s)	326
PsyI	GACNNNGTC	1 cut(s)	163
PteI	GCGCGC	1 cut(s)	1644
RruI	TCGCGA	1 cut(s)	2264
RsaI	GTAC	6 cut(s)	31, 1121, 1530, 1583, 1610, 2180
RsaNI	GTAC	6 cut(s)	30, 1120, 1529, 1582, 1609, 2179
RseI	CAYNNNNRTG	4 cut(s)	122, 477, 1295, 2207
Rsr2I	CGGWCCG	1 cut(s)	686
RsrII	CGGWCCG	1 cut(s)	686
SacI	GAGCTC	2 cut(s)	447, 896
SacII	CCGCGG	1 cut(s)	381
SalI	GTCGAC	1 cut(s)	1457
SapI	GCTCTTC	3 cut(s)	219, 711, 1751
SaqAI	TTAA	3 cut(s)	749, 1622, 2366
Sau3AI	GATC	3 cut(s)	318, 326, 2469
SchI	GAGTC	9 cut(s)	147, 154, 565, 1222, 1232, 1962, 1989, 2222, 2432
SfaNI	GCATC	3 cut(s)	640, 1335, 2160
SfcI	CTRYAG	1 cut(s)	1501
SfoI	GGCGCC	1 cut(s)	352
Sfr303I	CCGCGG	1 cut(s)	381
SgrAI	CRCCGGYG	1 cut(s)	2185
SgrBI	CCGCGG	1 cut(s)	381
SinI	GGWCC	6 cut(s)	686, 818, 920, 1711, 1822, 2068
SmiMI	CAYNNNNRTG	4 cut(s)	122, 477, 1295, 2207
SmlI	CTYRAG	1 cut(s)	518
SmoI	CTYRAG	1 cut(s)	518
SphI	GCATGC	4 cut(s)	955, 1352, 1577, 2131
Sse9I	AATT	5 cut(s)	262, 666, 804, 1474, 1975
SseBI	AGGCCT	1 cut(s)	201
SspDI	GGCGCC	1 cut(s)	350
SspMI	CTAG	7 cut(s)	132, 815, 854, 972, 1019, 1182, 1323
SstI	GAGCTC	2 cut(s)	447, 896
StuI	AGGCCT	1 cut(s)	201
StyI	CCWWGG	5 cut(s)	1032, 1554, 2058, 2071, 2304
TaiI	ACGT	7 cut(s)	285, 1857, 1869, 2150, 2211, 2241, 2378
TaqII	GACCGA	1 cut(s)	1930
TasI	AATT	5 cut(s)	262, 666, 804, 1474, 1975
TatI	WGTACW	2 cut(s)	1119, 1528
TauI	GCSGC	9 cut(s)	380, 684, 801, 1031, 1912, 2162, 2334, 2337, 2480
TfiI	GAWTC	3 cut(s)	54, 1108, 1243
Tru1I	TTAA	3 cut(s)	749, 1622, 2366
Tru9I	TTAA	3 cut(s)	749, 1622, 2366
TscAI	CASTG	5 cut(s)	843, 1297, 1688, 2367, 2492
TseFI	GTSAC	2 cut(s)	157, 2358
Tsp45I	GTSAC	2 cut(s)	157, 2358
TspDTI	ATGAA	3 cut(s)	581, 2123, 2231
TspGWI	ACGGA	4 cut(s)	246, 1376, 1444, 2235
TspRI	CASTG	5 cut(s)	843, 1297, 1688, 2367, 2492
Tth111I	GACNNNGTC	1 cut(s)	163
VneI	GTGCAC	3 cut(s)	774, 1332, 1482
VpaK11BI	GGWCC	6 cut(s)	686, 818, 920, 1711, 1822, 2068
XapI	RAATTY	1 cut(s)	262
XbaI	TCTAGA	1 cut(s)	853
XceI	RCATGY	6 cut(s)	640, 955, 1352, 1577, 1765, 2131
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1888, 2041
XmiI	GTMKAC	1 cut(s)	1458
XspI	CTAG	7 cut(s)	132, 815, 854, 972, 1019, 1182, 1323
ZraI	GACGTC	1 cut(s)	1867
Zsp2I	ATGCAT	1 cut(s)	1350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.