MD07G1131200.v1.1

Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
18790267 .. 18792890
2624 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1131200.v1.1.491

Sequence Viewer

Length: 1056 bp
ATGGCACTGTTAGCAGCCGCCGTCAAGCGAGCCACATCGATGTCGCGAGCCTTCTCTCCAATCCTCCGTTGCATGAGCAACGTGCCGGAAAACACCGTATACGGTGGGCCAAAGCCCCAAAACCCGGACCAGAGAGTCACGGTGACCCACTTGAAGCAGAAGCACAAGAAGGGCGAGCCGATCACCATGGTCACCGCCTACGATTACCCTTCTGCGGTGCACTTGGATTCCGCCGGCATAGACATTTGCTTGGTCGGCGATTCGGCGGCGATGGTGGTTCATGGCTACGACACCACTCTGCCCATCACGCTTGACGAAATGCTTGTTCACTGCCGAGCTGTGGCGCGTGGCGCAAAGCGGCCGCTTTTGGTTGGGGACTTGCCGTTTGGGTTCTATGAGTCTAGCTCCAATCAGGCTGTCGATACGGCGGTGAGGGTTTTAAAGGAGGGAGGAATGGATGCGATTAAATTGGAAGGAGGGGCACCTTCGAGGATTACTGCGGCAAAATCTATCGTTGAAGCTGGAATTGCTGTGATGGGGCATGTGGGACTTACTCCTCAGGCCATTAGTGTTCTTGGGGGTTTTAGGCCCCAGGGAAGGAATGTTGCTAGTGCTGTAAAGGTTGTGGAGACAGCACTGGCTCTGCAAGAAGCTGGGTGCTTTTCTGTTGTTTTAGAATGCGTACCTCCGCCGGTCGCTGCTGCTGCAACATCTGCTCTTCAGATTCCTACCATTGGCATTGGCGCAGGGCCTTTCTGCAGTGGTCAGGTGCTAGTTTACCATGATCTTCTTGGAATGATGCAACATCCACATCATGCCAAGGTTACCCCGAAATTCTGCAAGCAGTTTGCACATGTTGGAGAAGTCATCAACAAAGCTCTAGTAGAATACAAGGAAGAAGTGACTAGTGGTACGTTTCCTGGTGCGGCACACAGCCCATATAAAATCAGTGCTGCTGATGTTGATGGCTTTTCAAGTGAGTTACAGAAGTTGGGTTTCGACAAGGCAGCATCTGCAGCAACTGCAGCAGTTGAGAAGATCAATAGAGGCGAATAA

Protein Analysis

352

Amino Acids

36.79

Weight (kDa)

7.66

Isoelectric Point (pI)

35.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pantoate_transf PF02548 45 - 308 2.7e-107 Ketopantoate hydroxymethyltransferase
PEP_mutase PF13714 52 - 160 6.9e-07 Phosphoenolpyruvate phosphomutase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 134
AccB1I GGYRCC 1 cut(s) 481
AccI GTMKAC 1 cut(s) 99
AccII CGCG 2 cut(s) 46, 346
AcoI YGGCCR 1 cut(s) 359
AcsI RAATTY 1 cut(s) 833
AcuI CTGAAG 1 cut(s) 704
AfaI GTAC 2 cut(s) 684, 913
AfiI CCNNNNNNNGG 5 cut(s) 124, 214, 340, 597, 734
AflIII ACRYGT 1 cut(s) 853
AgsI TTSAA 3 cut(s) 154, 518, 975
AhlI ACTAGT 1 cut(s) 905
AjnI CCWGG 2 cut(s) 591, 919
AluBI AGCT 5 cut(s) 338, 405, 521, 653, 878
AluI AGCT 5 cut(s) 338, 405, 521, 653, 878
Alw21I GWGCWC 1 cut(s) 222
Alw26I GTCTC 1 cut(s) 623
Alw44I GTGCAC 1 cut(s) 218
AlwNI CAGNNNCTG 2 cut(s) 1013, 1022
AoxI GGCC 5 cut(s) 107, 359, 561, 587, 749
ApaLI GTGCAC 1 cut(s) 218
ApeKI GCWGC 8 cut(s) 14, 698, 701, 704, 953, 1007, 1016, 1025
ApoI RAATTY 1 cut(s) 833
ArsI GACNNNNNNTTYG 2 cut(s) 368, 400
AspLEI GCGC 3 cut(s) 346, 353, 746
AspS9I GGNCC 4 cut(s) 107, 127, 588, 749
AsuC2I CCSGG 1 cut(s) 125
AsuHPI GGTGA 4 cut(s) 154, 175, 184, 442
AvaII GGWCC 1 cut(s) 127
AxyI CCTNAGG 1 cut(s) 558
BaeGI GKGCMC 2 cut(s) 222, 484
BaeI ACNNNNGTAYC 2 cut(s) 414, 447
BanI GGYRCC 1 cut(s) 481
Bbv12I GWGCWC 1 cut(s) 222
BbvI GCAGC 8 cut(s) 26, 685, 688, 691, 940, 1019, 1028, 1037
BccI CCATC 4 cut(s) 265, 311, 529, 959
BceAI ACGGC 3 cut(s) 5, 367, 441
BciT130I CCWGG 2 cut(s) 593, 921
BcnI CCSGG 1 cut(s) 125
BcoDI GTCTC 1 cut(s) 623
BcuI ACTAGT 1 cut(s) 905
BfaI CTAG 5 cut(s) 402, 609, 773, 881, 906
BfmI CTRYAG 3 cut(s) 757, 1014, 1023
Bme1390I CCNGG 3 cut(s) 125, 593, 921
Bme18I GGWCC 1 cut(s) 127
BmgT120I GGNCC 4 cut(s) 107, 127, 588, 749
BmiI GGNNCC 2 cut(s) 483, 590
BmrFI CCNGG 3 cut(s) 125, 593, 921
BmsI GCATC 3 cut(s) 448, 789, 1019
BplI GAGNNNNNCTC 2 cut(s) 389, 421
BpuMI CCSGG 1 cut(s) 125
Bsa29I ATCGAT 1 cut(s) 38
BsaJI CCNNGG 4 cut(s) 186, 591, 592, 819
Bsc4I CCNNNNNNNGG 5 cut(s) 124, 214, 340, 597, 734
Bse118I RCCGGY 2 cut(s) 233, 691
Bse1I ACTGG 1 cut(s) 642
Bse21I CCTNAGG 1 cut(s) 558
BseBI CCWGG 2 cut(s) 593, 921
BseCI ATCGAT 1 cut(s) 38
BseDI CCNNGG 4 cut(s) 186, 591, 592, 819
BseGI GGATG 2 cut(s) 463, 805
BseLI CCNNNNNNNGG 5 cut(s) 124, 214, 340, 597, 734
BseMII CTCAG 1 cut(s) 572
BseNI ACTGG 1 cut(s) 642
BseRI GAGGAG 1 cut(s) 546
BseSI GKGCMC 2 cut(s) 222, 484
BseX3I CGGCCG 1 cut(s) 359
BseXI GCAGC 8 cut(s) 26, 685, 688, 691, 940, 1019, 1028, 1037
BseYI CCCAGC 1 cut(s) 653
Bsh1236I CGCG 2 cut(s) 46, 346
Bsh1285I CGRYCG 2 cut(s) 362, 696
BshFI GGCC 5 cut(s) 109, 361, 563, 589, 751
BshNI GGYRCC 1 cut(s) 481
BshVI ATCGAT 1 cut(s) 38
BsiEI CGRYCG 2 cut(s) 362, 696
BsiHKAI GWGCWC 1 cut(s) 222
BsiSI CCGG 4 cut(s) 86, 125, 234, 692
BslFI GGGAC 2 cut(s) 389, 561
BslI CCNNNNNNNGG 5 cut(s) 124, 214, 340, 597, 734
BsmAI GTCTC 1 cut(s) 623
BsmFI GGGAC 2 cut(s) 389, 561
BsmI GAATGC 1 cut(s) 683
BsnI GGCC 5 cut(s) 109, 361, 563, 589, 751
Bsp1286I GDGCHC 2 cut(s) 222, 484
Bsp143I GATC 3 cut(s) 180, 784, 1038
Bsp19I CCATGG 1 cut(s) 186
Bsp68I TCGCGA 1 cut(s) 46
BspANI GGCC 5 cut(s) 109, 361, 563, 589, 751
BspCNI CTCAG 1 cut(s) 571
BspDI ATCGAT 1 cut(s) 38
BspFNI CGCG 2 cut(s) 46, 346
BspLI GGNNCC 2 cut(s) 483, 590
BspMAI CTGCAG 3 cut(s) 761, 1018, 1027
BspQI GCTCTTC 1 cut(s) 723
BspT107I GGYRCC 1 cut(s) 481
BsrFI RCCGGY 2 cut(s) 233, 691
BsrI ACTGG 1 cut(s) 642
BssAI RCCGGY 2 cut(s) 233, 691
BssECI CCNNGG 4 cut(s) 186, 591, 592, 819
BssMI GATC 3 cut(s) 180, 784, 1038
BssNAI GTATAC 1 cut(s) 100
BssT1I CCWWGG 2 cut(s) 186, 819
Bst1107I GTATAC 1 cut(s) 100
Bst2UI CCWGG 2 cut(s) 593, 921
Bst4CI ACNGT 4 cut(s) 9, 97, 104, 142
Bst6I CTCTTC 1 cut(s) 723
BstAPI GCANNNNNTGC 3 cut(s) 713, 1013, 1022
BstC8I GCNNGC 5 cut(s) 30, 48, 176, 235, 842
BstDEI CTNAG 1 cut(s) 558
BstDSI CCRYGG 1 cut(s) 186
BstEII GGTNACC 3 cut(s) 142, 190, 823
BstF5I GGATG 2 cut(s) 463, 805
BstFNI CGCG 2 cut(s) 46, 346
BstHHI GCGC 3 cut(s) 346, 353, 746
BstKTI GATC 3 cut(s) 183, 787, 1041
BstMAI GTCTC 1 cut(s) 623
BstMBI GATC 3 cut(s) 180, 784, 1038
BstMCI CGRYCG 2 cut(s) 362, 696
BstNI CCWGG 2 cut(s) 593, 921
BstNSI RCATGY 2 cut(s) 545, 857
BstPI GGTNACC 3 cut(s) 142, 190, 823
BstSCI CCNGG 3 cut(s) 123, 591, 919
BstSFI CTRYAG 3 cut(s) 757, 1014, 1023
BstSLI GKGCMC 2 cut(s) 222, 484
BstUI CGCG 2 cut(s) 46, 346
BstV1I GCAGC 8 cut(s) 26, 685, 688, 691, 940, 1019, 1028, 1037
BstZ17I GTATAC 1 cut(s) 100
BstZI CGGCCG 1 cut(s) 359
Bsu15I ATCGAT 1 cut(s) 38
Bsu36I CCTNAGG 1 cut(s) 558
BsuRI GGCC 5 cut(s) 109, 361, 563, 589, 751
BsuTUI ATCGAT 1 cut(s) 38
BtgI CCRYGG 1 cut(s) 186
BtgZI GCGATG 1 cut(s) 284
BtsCI GGATG 2 cut(s) 463, 805
BtsI GCAGTG 2 cut(s) 328, 766
BtsIMutI CAGTG 5 cut(s) 5, 328, 635, 766, 955
BtuMI TCGCGA 1 cut(s) 46
Cac8I GCNNGC 5 cut(s) 30, 48, 176, 235, 842
CaiI CAGNNNCTG 2 cut(s) 1013, 1022
CciNI GCGGCCGC 1 cut(s) 359
CfoI GCGC 3 cut(s) 346, 353, 746
Cfr10I RCCGGY 2 cut(s) 233, 691
Cfr13I GGNCC 4 cut(s) 107, 127, 588, 749
ClaI ATCGAT 1 cut(s) 38
Csp6I GTAC 2 cut(s) 683, 912
CviAII CATG 7 cut(s) 73, 187, 281, 542, 782, 815, 854
CviQI GTAC 2 cut(s) 683, 912
DdeI CTNAG 1 cut(s) 558
DpnI GATC 3 cut(s) 182, 786, 1040
DpnII GATC 3 cut(s) 180, 784, 1038
DraI TTTAAA 1 cut(s) 441
DrdI GACNNNNNNGTC 1 cut(s) 134
DseDI GACNNNNNNGTC 1 cut(s) 134
EaeI YGGCCR 1 cut(s) 359
EagI CGGCCG 1 cut(s) 359
Eam1104I CTCTTC 1 cut(s) 723
EarI CTCTTC 1 cut(s) 723
EciI GGCGGA 2 cut(s) 220, 678
EclXI CGGCCG 1 cut(s) 359
Eco130I CCWWGG 2 cut(s) 186, 819
Eco47I GGWCC 1 cut(s) 127
Eco52I CGGCCG 1 cut(s) 359
Eco57I CTGAAG 1 cut(s) 704
Eco81I CCTNAGG 1 cut(s) 558
Eco91I GGTNACC 3 cut(s) 142, 190, 823
EcoO109I RGGNCCY 2 cut(s) 588, 749
EcoO65I GGTNACC 3 cut(s) 142, 190, 823
EcoRII CCWGG 2 cut(s) 591, 919
EcoT14I CCWWGG 2 cut(s) 186, 819
ErhI CCWWGG 2 cut(s) 186, 819
FaeI CATG 7 cut(s) 76, 190, 284, 545, 785, 818, 857
FaqI GGGAC 2 cut(s) 389, 561
FatI CATG 7 cut(s) 72, 186, 280, 541, 781, 814, 853
FblI GTMKAC 1 cut(s) 99
FokI GGATG 2 cut(s) 470, 792
FspBI CTAG 5 cut(s) 402, 609, 773, 881, 906
GlaI GCGC 3 cut(s) 345, 352, 745
GsaI CCCAGC 1 cut(s) 657
HaeIII GGCC 5 cut(s) 109, 361, 563, 589, 751
HapII CCGG 4 cut(s) 86, 125, 234, 692
HhaI GCGC 3 cut(s) 346, 353, 746
Hin1II CATG 7 cut(s) 76, 190, 284, 545, 785, 818, 857
Hin6I GCGC 3 cut(s) 344, 351, 744
HinP1I GCGC 3 cut(s) 344, 351, 744
HinfI GANTC 5 cut(s) 135, 227, 260, 398, 724
HpaII CCGG 4 cut(s) 86, 125, 234, 692
HphI GGTGA 4 cut(s) 154, 175, 184, 442
Hpy166II GTNNAC 4 cut(s) 100, 220, 328, 778
Hpy188I TCNGA 1 cut(s) 723
Hpy188III TCNNGA 1 cut(s) 45
Hpy8I GTNNAC 4 cut(s) 100, 220, 328, 778
HpyAV CCTTC 6 cut(s) 61, 163, 219, 467, 495, 591
HpyCH4III ACNGT 4 cut(s) 9, 97, 104, 142
HpyCH4IV ACGT 2 cut(s) 81, 914
HpyF3I CTNAG 1 cut(s) 558
HpySE526I ACGT 2 cut(s) 81, 914
Hsp92II CATG 7 cut(s) 76, 190, 284, 545, 785, 818, 857
HspAI GCGC 3 cut(s) 344, 351, 744
KroI GCCGGC 1 cut(s) 233
KroNI GCCGGC 1 cut(s) 235
Kzo9I GATC 3 cut(s) 180, 784, 1038
LguI GCTCTTC 1 cut(s) 723
LmnI GCTCC 1 cut(s) 410
Lsp1109I GCAGC 8 cut(s) 26, 685, 688, 691, 940, 1019, 1028, 1037
LweI GCATC 3 cut(s) 448, 789, 1019
MaeI CTAG 5 cut(s) 402, 609, 773, 881, 906
MaeII ACGT 2 cut(s) 81, 914
MaeIII GTNAC 6 cut(s) 136, 142, 190, 823, 901, 981
MalI GATC 3 cut(s) 182, 786, 1040
MboI GATC 3 cut(s) 180, 784, 1038
MboII GAAGA 4 cut(s) 710, 779, 908, 1048
MhlI GDGCHC 2 cut(s) 222, 484
MluCI AATT 3 cut(s) 467, 525, 833
MlyI GAGTC 2 cut(s) 144, 407
MmeI TCCRAC 1 cut(s) 838
MnlI CCTC 9 cut(s) 74, 426, 439, 443, 470, 483, 567, 696, 1040
MroNI GCCGGC 1 cut(s) 233
MseI TTAA 2 cut(s) 440, 465
MslI CAYNNNNRTG 1 cut(s) 38
MspI CCGG 4 cut(s) 86, 125, 234, 692
MspR9I CCNGG 3 cut(s) 125, 593, 921
Mva1269I GAATGC 1 cut(s) 683
MvaI CCWGG 2 cut(s) 593, 921
MvnI CGCG 2 cut(s) 46, 346
NaeI GCCGGC 1 cut(s) 235
NciI CCSGG 1 cut(s) 125
NcoI CCATGG 1 cut(s) 186
NdeII GATC 3 cut(s) 180, 784, 1038
NgoMIV GCCGGC 1 cut(s) 233
NlaIII CATG 7 cut(s) 76, 190, 284, 545, 785, 818, 857
NlaIV GGNNCC 2 cut(s) 483, 590
NmeAIII GCCGAG 1 cut(s) 359
NmuCI GTSAC 4 cut(s) 136, 142, 190, 901
NotI GCGGCCGC 1 cut(s) 359
NruI TCGCGA 1 cut(s) 46
NspI RCATGY 2 cut(s) 545, 857
PasI CCCWGGG 1 cut(s) 592
PciI ACATGT 1 cut(s) 853
PciSI GCTCTTC 1 cut(s) 723
PctI GAATGC 1 cut(s) 683
PdiI GCCGGC 1 cut(s) 235
PfeI GAWTC 3 cut(s) 227, 260, 724
PleI GAGTC 2 cut(s) 143, 406
PpsI GAGTC 2 cut(s) 143, 406
PscI ACATGT 1 cut(s) 853
Psp6I CCWGG 2 cut(s) 591, 919
PspEI GGTNACC 3 cut(s) 142, 190, 823
PspFI CCCAGC 1 cut(s) 653
PspGI CCWGG 2 cut(s) 591, 919
PspN4I GGNNCC 2 cut(s) 483, 590
PspPI GGNCC 4 cut(s) 107, 127, 588, 749
PstI CTGCAG 3 cut(s) 761, 1018, 1027
PstNI CAGNNNCTG 2 cut(s) 1013, 1022
RruI TCGCGA 1 cut(s) 46
RsaI GTAC 2 cut(s) 684, 913
RsaNI GTAC 2 cut(s) 683, 912
RseI CAYNNNNRTG 1 cut(s) 38
SapI GCTCTTC 1 cut(s) 723
SaqAI TTAA 2 cut(s) 440, 465
Sau3AI GATC 3 cut(s) 180, 784, 1038
Sau96I GGNCC 4 cut(s) 107, 127, 588, 749
SchI GAGTC 2 cut(s) 144, 407
ScrFI CCNGG 3 cut(s) 125, 593, 921
SduI GDGCHC 2 cut(s) 222, 484
SfaNI GCATC 3 cut(s) 448, 789, 1019
SfcI CTRYAG 3 cut(s) 757, 1014, 1023
SinI GGWCC 1 cut(s) 127
SmiMI CAYNNNNRTG 1 cut(s) 38
SpeI ACTAGT 1 cut(s) 905
Sse9I AATT 3 cut(s) 467, 525, 833
SspMI CTAG 5 cut(s) 402, 609, 773, 881, 906
StyD4I CCNGG 3 cut(s) 123, 591, 919
StyI CCWWGG 2 cut(s) 186, 819
TaaI ACNGT 4 cut(s) 9, 97, 104, 142
TaiI ACGT 2 cut(s) 84, 917
TaqI TCGA 4 cut(s) 38, 420, 488, 999
TasI AATT 3 cut(s) 467, 525, 833
TauI GCSGC 6 cut(s) 20, 269, 361, 364, 503, 929
TfiI GAWTC 3 cut(s) 227, 260, 724
Tru1I TTAA 2 cut(s) 440, 465
Tru9I TTAA 2 cut(s) 440, 465
TscAI CASTG 5 cut(s) 12, 335, 642, 766, 955
TseFI GTSAC 4 cut(s) 136, 142, 190, 901
TseI GCWGC 8 cut(s) 14, 698, 701, 704, 953, 1007, 1016, 1025
Tsp45I GTSAC 4 cut(s) 136, 142, 190, 901
TspDTI ATGAA 1 cut(s) 269
TspGWI ACGGA 1 cut(s) 56
TspRI CASTG 5 cut(s) 12, 335, 642, 766, 955
VneI GTGCAC 1 cut(s) 218
VpaK11BI GGWCC 1 cut(s) 127
XapI RAATTY 1 cut(s) 833
XceI RCATGY 2 cut(s) 545, 857
XcmI CCANNNNNNNNNTGG 1 cut(s) 788
XmiI GTMKAC 1 cut(s) 99
XspI CTAG 5 cut(s) 402, 609, 773, 881, 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.