RLG00000028006

Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
17620086 .. 17622115
2030 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028006

Sequence Viewer

Length: 1053 bp
ATGGCGTTCATGGCCGCCGTTTCACGCGCCGCGCTCTTTTCCCGTGCCGGAATCATCCGCTGCATGAGCAACATCCCCGAGAACACCGTCTACGGCGGCCCAAAGTCCCAGAGCCCCGACCACCGCGTCACCGTCACCCAAATCAAGCAGAAGCACAGCAAGGGCGAGCCCATCACCATGGTCACCGCCTACGACTACCCCTCCGCGGTCCACCTCGACTCCGCCGGAATTGACATTGCCTTGGTCGGCGACTCGGCTGCGATGGTCGTGCACGGCTATGACACCACCCTCCCTATAACGCTTGAAGAGATGCTCGTCCACTGCCGCGCGGTGGCGCGTGGGGCCAAGCGCCCGCTTTTGGTTGGGGACTTGCCGTTTGGATTCTACGAATCTAGCTCCATTCAGGCTATCGATACAGCGGTGAGGATTTTGAAGGAAGGAGCAATGGATGCAATAAAATTGGAAGGAGGGGCACCTTCGAGGATTACTGCGGCAAAATCTATTGTTGAGGCTGGAATTGCTGTGATGGGGCATGTGGGACTTACTCCGCAGGCGATTAGTGTTCTCGGGGGGTTTAGGCCTCAAGGAAGGAATGTGGCTAGTGCTGTAAAGGTTGTGGAGACCGCATTGGCTTTGCAAGAAGCTGGGTGCTTTTCTGTTGTTTTGGAATGTGTACCGCCACTTGTGGCGGCTGCAGCAACGTCTGCTCTTCGGATTCCTACAATTGGCATTGGAGCAGGGCCTTTTTGTAGTGGACAGGTGCTAGTTTACCATGATCTTCTTGGAATGATGCAGCACCCACATCATGCCAAGGTTACCCCTAAATTCTGTAAGCAGTTTGCACAGGTTGGAGATGTCATCAACAAAGCTCTTGTAGACTACAAGGAAGAAGTGACTAGTAGGACGTTCCCAGGCGCTGCCCACAGCCCATACAAGATTAACCCTGCTGAGGTTGATGGCTTTTTAAGCGAGTTACGAAAAATGGGTTTGGACAAGGCTGCATCTGCGGCAGCTGAAGCAGCTGAGAAGATAAATACAAATAAATCAAAGTAA

Protein Analysis

351

Amino Acids

36.86

Weight (kDa)

8.45

Isoelectric Point (pI)

35.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pantoate_transf PF02548 42 - 305 1.9e-104 Ketopantoate hydroxymethyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 125
AccB1I GGYRCC 1 cut(s) 472
AccI GTMKAC 2 cut(s) 90, 876
AccII CGCG 7 cut(s) 27, 32, 126, 206, 327, 329, 337
AcoI YGGCCR 1 cut(s) 12
AcsI RAATTY 1 cut(s) 824
AcuI CTGAAG 1 cut(s) 1035
AfaI GTAC 1 cut(s) 675
AfiI CCNNNNNNNGG 5 cut(s) 205, 331, 358, 725, 949
AgsI TTSAA 2 cut(s) 305, 433
AhlI ACTAGT 1 cut(s) 896
AjnI CCWGG 1 cut(s) 910
AluBI AGCT 5 cut(s) 396, 644, 869, 1013, 1022
AluI AGCT 5 cut(s) 396, 644, 869, 1013, 1022
Alw21I GWGCWC 1 cut(s) 273
Alw26I GTCTC 1 cut(s) 614
Alw44I GTGCAC 1 cut(s) 269
AlwNI CAGNNNCTG 1 cut(s) 917
Ama87I CYCGRG 2 cut(s) 77, 566
AoxI GGCC 5 cut(s) 12, 97, 342, 578, 740
ApaLI GTGCAC 1 cut(s) 269
ApeKI GCWGC 9 cut(s) 60, 257, 692, 695, 793, 917, 998, 1010, 1019
ApoI RAATTY 1 cut(s) 824
ArsI GACNNNNNNTTYG 2 cut(s) 359, 391
AspLEI GCGC 6 cut(s) 29, 34, 329, 337, 351, 917
AspS9I GGNCC 4 cut(s) 98, 208, 342, 740
AsuHPI GGTGA 5 cut(s) 121, 127, 166, 175, 433
AvaI CYCGRG 2 cut(s) 77, 566
AvaII GGWCC 1 cut(s) 208
BaeGI GKGCMC 2 cut(s) 273, 475
BaeI ACNNNNGTAYC 2 cut(s) 405, 438
BanI GGYRCC 1 cut(s) 472
BanII GRGCYC 2 cut(s) 116, 171
Bbv12I GWGCWC 1 cut(s) 273
BbvCI CCTCAGC 1 cut(s) 948
BbvI GCAGC 9 cut(s) 47, 244, 679, 707, 805, 904, 985, 1022, 1031
BccI CCATC 4 cut(s) 179, 256, 520, 950
BceAI ACGGC 4 cut(s) 2, 109, 289, 358
BcgI CGANNNNNNTGC 4 cut(s) 239, 250, 273, 284
BciT130I CCWGG 1 cut(s) 912
BcoDI GTCTC 1 cut(s) 614
BcuI ACTAGT 1 cut(s) 896
BfaI CTAG 4 cut(s) 393, 600, 764, 897
BfmI CTRYAG 1 cut(s) 693
BfoI RGCGCY 2 cut(s) 352, 918
Bme1390I CCNGG 1 cut(s) 912
Bme18I GGWCC 1 cut(s) 208
BmeT110I CYCGRG 2 cut(s) 77, 566
BmgT120I GGNCC 4 cut(s) 98, 208, 342, 740
BmiI GGNNCC 2 cut(s) 343, 474
BmrFI CCNGG 1 cut(s) 912
BmsI GCATC 4 cut(s) 300, 439, 780, 1010
Bpu10I CCTNAGC 1 cut(s) 948
BpuEI CTTGAG 1 cut(s) 567
Bsa29I ATCGAT 1 cut(s) 411
BsaI GGTCTC 1 cut(s) 614
BsaJI CCNNGG 5 cut(s) 177, 204, 240, 810, 910
BsaXI ACNNNNNCTCC 4 cut(s) 185, 203, 215, 233
Bsc4I CCNNNNNNNGG 5 cut(s) 205, 331, 358, 725, 949
Bse3DI GCAATG 2 cut(s) 234, 450
BseBI CCWGG 1 cut(s) 912
BseCI ATCGAT 1 cut(s) 411
BseDI CCNNGG 5 cut(s) 177, 204, 240, 810, 910
BseGI GGATG 3 cut(s) 54, 72, 454
BseLI CCNNNNNNNGG 5 cut(s) 205, 331, 358, 725, 949
BseMI GCAATG 2 cut(s) 234, 450
BseMII CTCAG 2 cut(s) 939, 1014
BseSI GKGCMC 2 cut(s) 273, 475
BseXI GCAGC 9 cut(s) 47, 244, 679, 707, 805, 904, 985, 1022, 1031
BseYI CCCAGC 1 cut(s) 644
Bsh1236I CGCG 7 cut(s) 27, 32, 126, 206, 327, 329, 337
BshFI GGCC 5 cut(s) 14, 99, 344, 580, 742
BshNI GGYRCC 1 cut(s) 472
BshVI ATCGAT 1 cut(s) 411
BsiHKAI GWGCWC 1 cut(s) 273
BsiHKCI CYCGRG 2 cut(s) 77, 566
BsiSI CCGG 2 cut(s) 48, 225
BslFI GGGAC 3 cut(s) 91, 380, 552
BslI CCNNNNNNNGG 5 cut(s) 205, 331, 358, 725, 949
BsmAI GTCTC 1 cut(s) 614
BsmFI GGGAC 3 cut(s) 91, 380, 552
BsnI GGCC 5 cut(s) 14, 99, 344, 580, 742
Bso31I GGTCTC 1 cut(s) 614
BsoBI CYCGRG 2 cut(s) 77, 566
Bsp1286I GDGCHC 4 cut(s) 116, 171, 273, 475
Bsp143I GATC 1 cut(s) 775
Bsp19I CCATGG 1 cut(s) 177
BspANI GGCC 5 cut(s) 14, 99, 344, 580, 742
BspCNI CTCAG 2 cut(s) 940, 1015
BspDI ATCGAT 1 cut(s) 411
BspFNI CGCG 7 cut(s) 27, 32, 126, 206, 327, 329, 337
BspLI GGNNCC 2 cut(s) 343, 474
BspMAI CTGCAG 1 cut(s) 697
BspQI GCTCTTC 1 cut(s) 714
BspT107I GGYRCC 1 cut(s) 472
BspTNI GGTCTC 1 cut(s) 614
BsrDI GCAATG 2 cut(s) 234, 450
BssECI CCNNGG 5 cut(s) 177, 204, 240, 810, 910
BssMI GATC 1 cut(s) 775
BssT1I CCWWGG 3 cut(s) 177, 240, 810
Bst2UI CCWGG 1 cut(s) 912
Bst4CI ACNGT 2 cut(s) 88, 133
Bst6I CTCTTC 2 cut(s) 300, 714
BstAPI GCANNNNNTGC 2 cut(s) 449, 704
BstC8I GCNNGC 3 cut(s) 167, 353, 552
BstDEI CTNAG 2 cut(s) 948, 1023
BstDSI CCRYGG 2 cut(s) 177, 204
BstEII GGTNACC 2 cut(s) 181, 814
BstF5I GGATG 3 cut(s) 54, 72, 454
BstFNI CGCG 7 cut(s) 27, 32, 126, 206, 327, 329, 337
BstH2I RGCGCY 2 cut(s) 352, 918
BstHHI GCGC 6 cut(s) 29, 34, 329, 337, 351, 917
BstKTI GATC 1 cut(s) 778
BstMAI GTCTC 1 cut(s) 614
BstMBI GATC 1 cut(s) 775
BstNI CCWGG 1 cut(s) 912
BstNSI RCATGY 1 cut(s) 536
BstPI GGTNACC 2 cut(s) 181, 814
BstSCI CCNGG 1 cut(s) 910
BstSFI CTRYAG 1 cut(s) 693
BstSLI GKGCMC 2 cut(s) 273, 475
BstUI CGCG 7 cut(s) 27, 32, 126, 206, 327, 329, 337
BstV1I GCAGC 9 cut(s) 47, 244, 679, 707, 805, 904, 985, 1022, 1031
BstXI CCANNNNNNTGG 1 cut(s) 178
Bsu15I ATCGAT 1 cut(s) 411
BsuRI GGCC 5 cut(s) 14, 99, 344, 580, 742
BsuTUI ATCGAT 1 cut(s) 411
BtgI CCRYGG 2 cut(s) 177, 204
BtgZI GCGATG 1 cut(s) 275
BtsCI GGATG 3 cut(s) 54, 72, 454
BtsI GCAGTG 1 cut(s) 319
BtsIMutI CAGTG 1 cut(s) 319
Cac8I GCNNGC 3 cut(s) 167, 353, 552
CaiI CAGNNNCTG 1 cut(s) 917
CfoI GCGC 6 cut(s) 29, 34, 329, 337, 351, 917
Cfr13I GGNCC 4 cut(s) 98, 208, 342, 740
Cfr42I CCGCGG 1 cut(s) 207
ClaI ATCGAT 1 cut(s) 411
CseI GACGC 1 cut(s) 115
Csp6I GTAC 1 cut(s) 674
CviAII CATG 6 cut(s) 10, 64, 178, 533, 773, 806
CviQI GTAC 1 cut(s) 674
DdeI CTNAG 2 cut(s) 948, 1023
DpnI GATC 1 cut(s) 777
DpnII GATC 1 cut(s) 775
DrdI GACNNNNNNGTC 1 cut(s) 125
DseDI GACNNNNNNGTC 1 cut(s) 125
EaeI YGGCCR 1 cut(s) 12
Eam1104I CTCTTC 2 cut(s) 300, 714
EarI CTCTTC 2 cut(s) 300, 714
EciI GGCGGA 1 cut(s) 211
Eco130I CCWWGG 3 cut(s) 177, 240, 810
Eco147I AGGCCT 1 cut(s) 580
Eco24I GRGCYC 2 cut(s) 116, 171
Eco31I GGTCTC 1 cut(s) 614
Eco47I GGWCC 1 cut(s) 208
Eco57I CTGAAG 1 cut(s) 1035
Eco88I CYCGRG 2 cut(s) 77, 566
Eco91I GGTNACC 2 cut(s) 181, 814
EcoO109I RGGNCCY 1 cut(s) 740
EcoO65I GGTNACC 2 cut(s) 181, 814
EcoRII CCWGG 1 cut(s) 910
EcoT14I CCWWGG 3 cut(s) 177, 240, 810
EcoT38I GRGCYC 2 cut(s) 116, 171
ErhI CCWWGG 3 cut(s) 177, 240, 810
FaeI CATG 6 cut(s) 13, 67, 181, 536, 776, 809
FaiI YATR 9 cut(s) 11, 65, 179, 279, 296, 534, 774, 807, 931
FaqI GGGAC 3 cut(s) 91, 380, 552
FatI CATG 6 cut(s) 9, 63, 177, 532, 772, 805
FauI CCCGC 1 cut(s) 360
FblI GTMKAC 2 cut(s) 90, 876
FokI GGATG 3 cut(s) 41, 59, 461
FriOI GRGCYC 2 cut(s) 116, 171
FspBI CTAG 4 cut(s) 393, 600, 764, 897
GlaI GCGC 6 cut(s) 28, 33, 328, 336, 350, 916
GsaI CCCAGC 1 cut(s) 648
HaeII RGCGCY 2 cut(s) 352, 918
HaeIII GGCC 5 cut(s) 14, 99, 344, 580, 742
HapII CCGG 2 cut(s) 48, 225
HgaI GACGC 1 cut(s) 115
HhaI GCGC 6 cut(s) 29, 34, 329, 337, 351, 917
Hin1II CATG 6 cut(s) 13, 67, 181, 536, 776, 809
Hin6I GCGC 6 cut(s) 27, 32, 327, 335, 349, 915
HinP1I GCGC 6 cut(s) 27, 32, 327, 335, 349, 915
HinfI GANTC 6 cut(s) 51, 218, 251, 381, 389, 715
HpaII CCGG 2 cut(s) 48, 225
HphI GGTGA 5 cut(s) 121, 127, 166, 175, 433
Hpy166II GTNNAC 8 cut(s) 91, 211, 271, 319, 674, 755, 769, 877
Hpy188I TCNGA 1 cut(s) 714
Hpy8I GTNNAC 8 cut(s) 91, 211, 271, 319, 674, 755, 769, 877
HpyAV CCTTC 5 cut(s) 427, 431, 458, 486, 582
HpyCH4III ACNGT 2 cut(s) 88, 133
HpyCH4IV ACGT 2 cut(s) 701, 905
HpyCH4V TGCA 8 cut(s) 63, 271, 452, 637, 695, 793, 842, 1001
HpyF3I CTNAG 2 cut(s) 948, 1023
HpySE526I ACGT 2 cut(s) 701, 905
Hsp92II CATG 6 cut(s) 13, 67, 181, 536, 776, 809
HspAI GCGC 6 cut(s) 27, 32, 327, 335, 349, 915
KspI CCGCGG 1 cut(s) 207
Kzo9I GATC 1 cut(s) 775
LguI GCTCTTC 1 cut(s) 714
LmnI GCTCC 3 cut(s) 401, 440, 734
Lsp1109I GCAGC 9 cut(s) 47, 244, 679, 707, 805, 904, 985, 1022, 1031
LweI GCATC 4 cut(s) 300, 439, 780, 1010
MaeI CTAG 4 cut(s) 393, 600, 764, 897
MaeII ACGT 2 cut(s) 701, 905
MaeIII GTNAC 6 cut(s) 127, 133, 181, 814, 892, 972
MalI GATC 1 cut(s) 777
MboI GATC 1 cut(s) 775
MboII GAAGA 5 cut(s) 317, 701, 770, 899, 1039
MfeI CAATTG 1 cut(s) 723
MhlI GDGCHC 4 cut(s) 116, 171, 273, 475
MluCI AATT 5 cut(s) 228, 458, 516, 723, 824
MlyI GAGTC 2 cut(s) 212, 245
MmeI TCCRAC 1 cut(s) 829
MnlI CCTC 9 cut(s) 211, 224, 299, 417, 461, 474, 502, 591, 943
MseI TTAA 2 cut(s) 939, 965
MslI CAYNNNNRTG 2 cut(s) 176, 276
MspA1I CMGCKG 5 cut(s) 60, 206, 419, 1013, 1022
MspI CCGG 2 cut(s) 48, 225
MspR9I CCNGG 1 cut(s) 912
MteI GCGCNGCGC 1 cut(s) 30
MunI CAATTG 1 cut(s) 723
MvaI CCWGG 1 cut(s) 912
MvnI CGCG 7 cut(s) 27, 32, 126, 206, 327, 329, 337
NcoI CCATGG 1 cut(s) 177
NdeII GATC 1 cut(s) 775
NlaIII CATG 6 cut(s) 13, 67, 181, 536, 776, 809
NlaIV GGNNCC 2 cut(s) 343, 474
NmeAIII GCCGAG 1 cut(s) 233
NmuCI GTSAC 4 cut(s) 127, 133, 181, 892
NspI RCATGY 1 cut(s) 536
PceI AGGCCT 1 cut(s) 580
PciSI GCTCTTC 1 cut(s) 714
PfeI GAWTC 4 cut(s) 51, 381, 389, 715
PleI GAGTC 2 cut(s) 212, 245
PpsI GAGTC 2 cut(s) 212, 245
Psp6I CCWGG 1 cut(s) 910
PspEI GGTNACC 2 cut(s) 181, 814
PspFI CCCAGC 1 cut(s) 644
PspGI CCWGG 1 cut(s) 910
PspN4I GGNNCC 2 cut(s) 343, 474
PspPI GGNCC 4 cut(s) 98, 208, 342, 740
PsrI GAACNNNNNNTAC 2 cut(s) 74, 106
PstI CTGCAG 1 cut(s) 697
PstNI CAGNNNCTG 1 cut(s) 917
PvuII CAGCTG 2 cut(s) 1013, 1022
RsaI GTAC 1 cut(s) 675
RsaNI GTAC 1 cut(s) 674
RseI CAYNNNNRTG 2 cut(s) 176, 276
SacII CCGCGG 1 cut(s) 207
SapI GCTCTTC 1 cut(s) 714
SaqAI TTAA 2 cut(s) 939, 965
Sau3AI GATC 1 cut(s) 775
Sau96I GGNCC 4 cut(s) 98, 208, 342, 740
SchI GAGTC 2 cut(s) 212, 245
ScrFI CCNGG 1 cut(s) 912
SduI GDGCHC 4 cut(s) 116, 171, 273, 475
SfaNI GCATC 4 cut(s) 300, 439, 780, 1010
SfcI CTRYAG 1 cut(s) 693
Sfr303I CCGCGG 1 cut(s) 207
SgrBI CCGCGG 1 cut(s) 207
SinI GGWCC 1 cut(s) 208
SmiMI CAYNNNNRTG 2 cut(s) 176, 276
SmlI CTYRAG 1 cut(s) 582
SmoI CTYRAG 1 cut(s) 582
SpeI ACTAGT 1 cut(s) 896
Sse9I AATT 5 cut(s) 228, 458, 516, 723, 824
SseBI AGGCCT 1 cut(s) 580
SspMI CTAG 4 cut(s) 393, 600, 764, 897
StuI AGGCCT 1 cut(s) 580
StyD4I CCNGG 1 cut(s) 910
StyI CCWWGG 3 cut(s) 177, 240, 810
TaaI ACNGT 2 cut(s) 88, 133
TaiI ACGT 2 cut(s) 704, 908
TaqI TCGA 3 cut(s) 216, 411, 479
TasI AATT 5 cut(s) 228, 458, 516, 723, 824
TauI GCSGC 7 cut(s) 17, 32, 99, 327, 494, 692, 1010
TfiI GAWTC 4 cut(s) 51, 381, 389, 715
Tru1I TTAA 2 cut(s) 939, 965
Tru9I TTAA 2 cut(s) 939, 965
TscAI CASTG 1 cut(s) 326
TseFI GTSAC 4 cut(s) 127, 133, 181, 892
TseI GCWGC 9 cut(s) 60, 257, 692, 695, 793, 917, 998, 1010, 1019
Tsp45I GTSAC 4 cut(s) 127, 133, 181, 892
TspRI CASTG 1 cut(s) 326
VneI GTGCAC 1 cut(s) 269
VpaK11BI GGWCC 1 cut(s) 208
XapI RAATTY 1 cut(s) 824
XceI RCATGY 1 cut(s) 536
XcmI CCANNNNNNNNNTGG 1 cut(s) 779
XmiI GTMKAC 2 cut(s) 90, 876
XspI CTAG 4 cut(s) 393, 600, 764, 897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.