Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0002329

Physical Location & Seq

Genomic Coordinates Forward (+)

8110785 .. 8112239

Gene Structure 1455 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1096500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1101 bp

ATGAAGAAAAATGGATTCCCCAATGTTGAACAAATTTTAGAGTGCTTTGTCCAGCCACACCATGCTTCTGAAGAGTCAGATAAGCCCTTCTTCTTGACACCAGGTGATCTTGCCATGTCTCTTTCCGTTGCGCTTGGTCATTTCTACCCGCTTGCAGGTCGCTTGGTTACCAAGAAATCTGAGGACCCGGCTTTGTATTTGGTGTATGTGGATATCAACAACAGCCCTGGGGCCAAATTCATATATGCAACTCTGGACATGTCAATCTCCGACATTCTTTCACCGACTGATGTCCCGTTGGTGGTCCAATCATTCTTCGATCATGACAGGGCAGTAAACCATGACGGGCACACCATGTCTTTGCTGACGATTCAGGTCACGGAACTTGTGGATGGAATCTTGATAGGGCCTTCCATGAATCACTGCCTTGGTGATGGAACCTCGTTCTGGCATTTCTTCAACATTTGGTCTGAAATCTTTCAAGCACAAGCACAAGGACGTCACAATGATTTTGTAGCCAATATCTCGCAGCCACCTGTTCTCGAGAGCTGGTTTCCGGATGGTCATGGCCCAATCATCAACCTACGTTTCAAACACTCGGATGAGTTCATTGGCAGATTTGAAGCTCCCCCTCTCAGGGAGAGAATGTTTCACTTGTCCTCGGAATCCATAGCCAAACTTAAAGCAAAGGCCAATGCAGAGTCCAAGACAACAAAAATTTCTTCCTTCCAGTCCTTATCTGCCCTTCTCTGGCGCTCCATTACTCGTGCGCGTTGTCTATCACCGGATCAAGGAACCAGCTGCAGGCATAAGGCGGTGGTTAACCACAATGACAACGTGATACGAGAGCTTATTGATGCGTGGCTGAAGTCTCCCGCTGTGTACCAAGTAAGCTATTTTGATCCATTCAGTATTATGATGGGGAGTTCACCAAGATTCAACATGTATGGAAATGAATTTGGAATGGGAAAAGCGATAGCACTTCGAAGTGGATACGCAACCAAGTTTAGTGGCAAAGTGTCATCGTATGAAGGACGCGAAGAAGGAAGCATAGACTTGGAGGTGTGTCTTCCACCTGAAGCAATGAGTGAGTGTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010143 GO:0016043 GO:0030154 GO:0032502 GO:0032989 GO:0043170 GO:0044424 GO:0044464 GO:0048468 GO:0048856 GO:0048869 GO:0051179 GO:0071704 GO:0071840 GO:0090558 GO:0090626 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Transferase

Protein Analysis

367

Amino Acids

40.8

Weight (kDa)

5.86

Isoelectric Point (pI)

55.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	36 - 266	1.9e-33	Transferase family
Transferase	PF02458	270 - 364	2.8e-09	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002329)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07850 AT5G42830
fragaria_vesca	FvH4_2g34050 FvH4_2g34060 FvH4_2g34061
malus_domestica	MD08G1096500.v1.1 MD08G1096600.v1.1 MD15G1079200.v1.1 MD15G1079300.v1.1
prunus_persica	Prupe.1G432300_v2.0.a1 Prupe.1G432400_v2.0.a1 Prupe.1G432500_v2.0.a1
pyrus_communis	pycom08g07870 pycom15g07380
rosa_chinensis	RchiOBHm_Chr6g0308291 RchiOBHm_Chr6g0308301 RchiOBHm_Chr6g0308421
rosa_laevigata	RLG00000010650
rosa_multiflora	Rmu_co8463877.1_g000001 Rmu_sc0003583.1_g000001 Rmu_sc0005523.1_g000006 Rmu_sc0011796.1_g000002 Rmu_ssc0000355.1_g000011
rosa_roxburghii	Rroxscaffold_7G00160150 Rroxscaffold_7G00160240 Rroxscaffold_7G00160280
rosa_rugosa	Rorug06G0366000 Rorug06G0366500
rosa_samantha	Rh6AG474900 Rh6AG475000 Rh6AG476200 Rh6BG485500 Rh6BG485600 Rh6BG485700 Rh6BG486400 Rh6CG490600 Rh6CG490800 Rh6CG490900 Rh6CG491600 Rh6DG477200
rosa_wichuraiana	Rw6G041430 Rw6G041500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	502
Acc36I	ACCTGC	1 cut(s)	146
AccII	CGCG	2 cut(s)	772, 1038
AccIII	TCCGGA	1 cut(s)	556
AciI	CCGC	3 cut(s)	149, 815, 876
AclWI	GGATC	2 cut(s)	795, 896
AcsI	RAATTY	4 cut(s)	33, 236, 717, 956
AcuI	CTGAAG	3 cut(s)	90, 887, 1098
AcyI	GRCGYC	1 cut(s)	499
AdeI	CACNNNGTG	1 cut(s)	104
AfaI	GTAC	1 cut(s)	884
AfiI	CCNNNNNNNGG	8 cut(s)	155, 301, 447, 636, 637, 750, 791, 804
AflIII	ACRYGT	2 cut(s)	258, 942
AgsI	TTSAA	6 cut(s)	29, 460, 482, 592, 623, 940
AjnI	CCWGG	2 cut(s)	100, 226
AluBI	AGCT	5 cut(s)	549, 626, 801, 850, 894
AluI	AGCT	5 cut(s)	549, 626, 801, 850, 894
Alw26I	GTCTC	2 cut(s)	123, 876
AlwI	GGATC	2 cut(s)	795, 896
Ama87I	CYCGRG	1 cut(s)	542
Aor13HI	TCCGGA	1 cut(s)	556
AoxI	GGCC	4 cut(s)	231, 407, 568, 690
ApeKI	GCWGC	2 cut(s)	529, 801
ApoI	RAATTY	4 cut(s)	33, 236, 717, 956
Asp700I	GAANNNNTTC	1 cut(s)	477
AspLEI	GCGC	3 cut(s)	133, 756, 772
AspS9I	GGNCC	5 cut(s)	184, 231, 304, 407, 569
AsuC2I	CCSGG	1 cut(s)	188
AsuHPI	GGTGA	5 cut(s)	116, 273, 443, 774, 921
AsuII	TTCGAA	1 cut(s)	985
AvaI	CYCGRG	1 cut(s)	542
AvaII	GGWCC	2 cut(s)	184, 304
BaeGI	GKGCMC	1 cut(s)	351
BauI	CACGAG	1 cut(s)	765
BbsI	GAAGAC	1 cut(s)	1061
BbvI	GCAGC	2 cut(s)	541, 788
BccI	CCATC	4 cut(s)	386, 428, 554, 913
BciT130I	CCWGG	2 cut(s)	102, 228
BciVI	GTATCC	1 cut(s)	986
BcnI	CCSGG	1 cut(s)	188
BcoDI	GTCTC	2 cut(s)	123, 876
BfmI	CTRYAG	1 cut(s)	802
BfoI	RGCGCY	1 cut(s)	757
BfuAI	ACCTGC	1 cut(s)	146
BfuI	GTATCC	1 cut(s)	986
BisI	GCNGC	2 cut(s)	530, 802
BlsI	GCNGC	2 cut(s)	531, 803
Bme1390I	CCNGG	3 cut(s)	102, 188, 228
Bme18I	GGWCC	2 cut(s)	184, 304
BmeT110I	CYCGRG	1 cut(s)	542
BmgT120I	GGNCC	5 cut(s)	184, 231, 304, 407, 569
BmiI	GGNNCC	4 cut(s)	186, 232, 439, 796
BmrFI	CCNGG	3 cut(s)	102, 188, 228
BmsI	GCATC	1 cut(s)	847
BoxI	GACNNNNGTC	1 cut(s)	290
BpiI	GAAGAC	1 cut(s)	1061
Bpu14I	TTCGAA	1 cut(s)	985
BpuMI	CCSGG	1 cut(s)	188
BsaHI	GRCGYC	1 cut(s)	499
BsaJI	CCNNGG	4 cut(s)	226, 227, 427, 660
BsaWI	WCCGGW	2 cut(s)	556, 784
BsaXI	ACNNNNNCTCC	2 cut(s)	632, 662
Bsc4I	CCNNNNNNNGG	8 cut(s)	155, 301, 447, 636, 637, 750, 791, 804
Bse1I	ACTGG	1 cut(s)	730
Bse3DI	GCAATG	1 cut(s)	1089
BseAI	TCCGGA	1 cut(s)	556
BseBI	CCWGG	2 cut(s)	102, 228
BseDI	CCNNGG	4 cut(s)	226, 227, 427, 660
BseGI	GGATG	3 cut(s)	397, 565, 607
BseLI	CCNNNNNNNGG	8 cut(s)	155, 301, 447, 636, 637, 750, 791, 804
BseMI	GCAATG	1 cut(s)	1089
BseMII	CTCAG	2 cut(s)	171, 649
BseNI	ACTGG	1 cut(s)	730
BseSI	GKGCMC	1 cut(s)	351
BseXI	GCAGC	2 cut(s)	541, 788
Bsh1236I	CGCG	2 cut(s)	772, 1038
BshFI	GGCC	4 cut(s)	233, 409, 570, 692
BsiHKCI	CYCGRG	1 cut(s)	542
BsiSI	CCGG	3 cut(s)	188, 557, 785
BslFI	GGGAC	1 cut(s)	278
BslI	CCNNNNNNNGG	8 cut(s)	155, 301, 447, 636, 637, 750, 791, 804
BsmAI	GTCTC	2 cut(s)	123, 876
BsmFI	GGGAC	1 cut(s)	278
BsnI	GGCC	4 cut(s)	233, 409, 570, 692
BsoBI	CYCGRG	1 cut(s)	542
Bsp119I	TTCGAA	1 cut(s)	985
Bsp1286I	GDGCHC	1 cut(s)	351
Bsp13I	TCCGGA	1 cut(s)	556
Bsp143I	GATC	4 cut(s)	106, 319, 787, 901
BspACI	CCGC	3 cut(s)	149, 815, 876
BspANI	GGCC	4 cut(s)	233, 409, 570, 692
BspCNI	CTCAG	2 cut(s)	172, 648
BspEI	TCCGGA	1 cut(s)	556
BspFNI	CGCG	2 cut(s)	772, 1038
BspHI	TCATGA	1 cut(s)	322
BspLI	GGNNCC	4 cut(s)	186, 232, 439, 796
BspMAI	CTGCAG	1 cut(s)	806
BspMI	ACCTGC	1 cut(s)	146
BspPI	GGATC	2 cut(s)	795, 896
BspT104I	TTCGAA	1 cut(s)	985
BsrDI	GCAATG	1 cut(s)	1089
BsrI	ACTGG	1 cut(s)	730
BssECI	CCNNGG	4 cut(s)	226, 227, 427, 660
BssMI	GATC	4 cut(s)	106, 319, 787, 901
BssNI	GRCGYC	1 cut(s)	499
BssSI	CACGAG	1 cut(s)	765
BssT1I	CCWWGG	1 cut(s)	427
Bst2BI	CACGAG	1 cut(s)	765
Bst2UI	CCWGG	2 cut(s)	102, 228
Bst6I	CTCTTC	1 cut(s)	66
BstACI	GRCGYC	1 cut(s)	499
BstBI	TTCGAA	1 cut(s)	985
BstC8I	GCNNGC	2 cut(s)	153, 806
BstDEI	CTNAG	2 cut(s)	180, 635
BstEII	GGTNACC	1 cut(s)	166
BstF5I	GGATG	3 cut(s)	397, 565, 607
BstFNI	CGCG	2 cut(s)	772, 1038
BstH2I	RGCGCY	1 cut(s)	757
BstHHI	GCGC	3 cut(s)	133, 756, 772
BstKTI	GATC	4 cut(s)	109, 322, 790, 904
BstMAI	GTCTC	2 cut(s)	123, 876
BstMBI	GATC	4 cut(s)	106, 319, 787, 901
BstNI	CCWGG	2 cut(s)	102, 228
BstNSI	RCATGY	2 cut(s)	262, 946
BstPAI	GACNNNNGTC	1 cut(s)	290
BstPI	GGTNACC	1 cut(s)	166
BstSCI	CCNGG	3 cut(s)	100, 186, 226
BstSFI	CTRYAG	1 cut(s)	802
BstSLI	GKGCMC	1 cut(s)	351
BstUI	CGCG	2 cut(s)	772, 1038
BstV1I	GCAGC	2 cut(s)	541, 788
BstV2I	GAAGAC	1 cut(s)	1061
BsuI	GTATCC	1 cut(s)	986
BsuRI	GGCC	4 cut(s)	233, 409, 570, 692
BtsCI	GGATG	3 cut(s)	397, 565, 607
BtsI	GCAGTG	1 cut(s)	421
BtsIMutI	CAGTG	1 cut(s)	421
BveI	ACCTGC	1 cut(s)	146
Cac8I	GCNNGC	2 cut(s)	153, 806
CciI	TCATGA	1 cut(s)	322
CfoI	GCGC	3 cut(s)	133, 756, 772
Cfr13I	GGNCC	5 cut(s)	184, 231, 304, 407, 569
CseI	GACGC	1 cut(s)	1044
CsiI	ACCWGGT	1 cut(s)	100
Csp6I	GTAC	1 cut(s)	883
CspCI	CAANNNNNGTGG	2 cut(s)	991, 1026
CviAII	CATG	9 cut(s)	62, 115, 259, 323, 341, 355, 415, 566, 943
CviQI	GTAC	1 cut(s)	883
DdeI	CTNAG	2 cut(s)	180, 635
DpnI	GATC	4 cut(s)	108, 321, 789, 903
DpnII	GATC	4 cut(s)	106, 319, 787, 901
DraIII	CACNNNGTG	1 cut(s)	104
Eam1104I	CTCTTC	1 cut(s)	66
EarI	CTCTTC	1 cut(s)	66
Eco130I	CCWWGG	1 cut(s)	427
Eco32I	GATATC	1 cut(s)	214
Eco47I	GGWCC	2 cut(s)	184, 304
Eco57I	CTGAAG	3 cut(s)	90, 887, 1098
Eco88I	CYCGRG	1 cut(s)	542
Eco91I	GGTNACC	1 cut(s)	166
EcoO109I	RGGNCCY	2 cut(s)	184, 407
EcoO65I	GGTNACC	1 cut(s)	166
EcoRII	CCWGG	2 cut(s)	100, 226
EcoRV	GATATC	1 cut(s)	214
EcoT14I	CCWWGG	1 cut(s)	427
ErhI	CCWWGG	1 cut(s)	427
FaeI	CATG	9 cut(s)	65, 118, 262, 326, 344, 358, 418, 569, 946
FalI	AAGNNNNNCTT	2 cut(s)	74, 106
FaqI	GGGAC	1 cut(s)	278
FatI	CATG	9 cut(s)	61, 114, 258, 322, 340, 354, 414, 565, 942
FauI	CCCGC	2 cut(s)	156, 883
Fnu4HI	GCNGC	2 cut(s)	530, 802
FokI	GGATG	3 cut(s)	404, 572, 614
Fsp4HI	GCNGC	2 cut(s)	530, 802
GlaI	GCGC	3 cut(s)	132, 755, 771
GluI	GCNGC	2 cut(s)	530, 802
HaeII	RGCGCY	1 cut(s)	757
HaeIII	GGCC	4 cut(s)	233, 409, 570, 692
HapII	CCGG	3 cut(s)	188, 557, 785
HgaI	GACGC	1 cut(s)	1044
HhaI	GCGC	3 cut(s)	133, 756, 772
Hin1I	GRCGYC	1 cut(s)	499
Hin1II	CATG	9 cut(s)	65, 118, 262, 326, 344, 358, 418, 569, 946
Hin6I	GCGC	3 cut(s)	131, 754, 770
HinP1I	GCGC	3 cut(s)	131, 754, 770
HincII	GTYRAC	1 cut(s)	823
HindII	GTYRAC	1 cut(s)	823
HinfI	GANTC	8 cut(s)	15, 74, 370, 396, 418, 665, 701, 936
HpaI	GTTAAC	1 cut(s)	823
HpaII	CCGG	3 cut(s)	188, 557, 785
HphI	GGTGA	5 cut(s)	116, 273, 443, 774, 921
Hpy166II	GTNNAC	4 cut(s)	337, 823, 883, 929
Hpy188I	TCNGA	7 cut(s)	70, 79, 181, 271, 472, 601, 664
Hpy188III	TCNNGA	8 cut(s)	94, 254, 323, 400, 542, 544, 557, 1098
Hpy8I	GTNNAC	4 cut(s)	337, 823, 883, 929
HpyAV	CCTTC	6 cut(s)	97, 420, 736, 755, 1025, 1037
HpyCH4IV	ACGT	3 cut(s)	499, 586, 837
HpyCH4V	TGCA	4 cut(s)	155, 248, 698, 804
HpyF3I	CTNAG	2 cut(s)	180, 635
HpySE526I	ACGT	3 cut(s)	499, 586, 837
Hsp92I	GRCGYC	1 cut(s)	499
Hsp92II	CATG	9 cut(s)	65, 118, 262, 326, 344, 358, 418, 569, 946
HspAI	GCGC	3 cut(s)	131, 754, 770
Kpn2I	TCCGGA	1 cut(s)	556
KspAI	GTTAAC	1 cut(s)	823
Kzo9I	GATC	4 cut(s)	106, 319, 787, 901
LmnI	GCTCC	2 cut(s)	631, 761
Lsp1109I	GCAGC	2 cut(s)	541, 788
LweI	GCATC	1 cut(s)	847
MabI	ACCWGGT	1 cut(s)	100
MaeII	ACGT	3 cut(s)	499, 586, 837
MaeIII	GTNAC	3 cut(s)	166, 376, 500
MalI	GATC	4 cut(s)	108, 321, 789, 903
MboI	GATC	4 cut(s)	106, 319, 787, 901
MboII	GAAGA	8 cut(s)	16, 82, 83, 307, 448, 714, 1052, 1061
MhlI	GDGCHC	1 cut(s)	351
MluCI	AATT	4 cut(s)	33, 236, 717, 956
MlyI	GAGTC	2 cut(s)	83, 710
MmeI	TCCRAC	1 cut(s)	294
MnlI	CCTC	5 cut(s)	175, 451, 642, 670, 1054
MroI	TCCGGA	1 cut(s)	556
MroXI	GAANNNNTTC	1 cut(s)	477
MseI	TTAA	2 cut(s)	681, 822
MslI	CAYNNNNRTG	1 cut(s)	600
MspA1I	CMGCKG	2 cut(s)	801, 878
MspI	CCGG	3 cut(s)	188, 557, 785
MspR9I	CCNGG	3 cut(s)	102, 188, 228
MvaI	CCWGG	2 cut(s)	102, 228
MvnI	CGCG	2 cut(s)	772, 1038
NciI	CCSGG	1 cut(s)	188
NdeII	GATC	4 cut(s)	106, 319, 787, 901
NlaIII	CATG	9 cut(s)	65, 118, 262, 326, 344, 358, 418, 569, 946
NlaIV	GGNNCC	4 cut(s)	186, 232, 439, 796
NmuCI	GTSAC	2 cut(s)	376, 500
NspI	RCATGY	2 cut(s)	262, 946
NspV	TTCGAA	1 cut(s)	985
PaeR7I	CTCGAG	1 cut(s)	542
PagI	TCATGA	1 cut(s)	322
PasI	CCCWGGG	1 cut(s)	227
PciI	ACATGT	2 cut(s)	258, 942
PdmI	GAANNNNTTC	1 cut(s)	477
PfeI	GAWTC	6 cut(s)	15, 370, 396, 418, 665, 936
PkrI	GCNGC	2 cut(s)	531, 803
PleI	GAGTC	2 cut(s)	82, 709
PpsI	GAGTC	2 cut(s)	82, 709
PpuMI	RGGWCCY	1 cut(s)	184
PscI	ACATGT	2 cut(s)	258, 942
PshAI	GACNNNNGTC	1 cut(s)	290
Psp5II	RGGWCCY	1 cut(s)	184
Psp6I	CCWGG	2 cut(s)	100, 226
PspEI	GGTNACC	1 cut(s)	166
PspGI	CCWGG	2 cut(s)	100, 226
PspN4I	GGNNCC	4 cut(s)	186, 232, 439, 796
PspPI	GGNCC	5 cut(s)	184, 231, 304, 407, 569
PspPPI	RGGWCCY	1 cut(s)	184
PstI	CTGCAG	1 cut(s)	806
PvuII	CAGCTG	1 cut(s)	801
RsaI	GTAC	1 cut(s)	884
RsaNI	GTAC	1 cut(s)	883
RseI	CAYNNNNRTG	1 cut(s)	600
SaqAI	TTAA	2 cut(s)	681, 822
SatI	GCNGC	2 cut(s)	530, 802
Sau3AI	GATC	4 cut(s)	106, 319, 787, 901
Sau96I	GGNCC	5 cut(s)	184, 231, 304, 407, 569
SchI	GAGTC	2 cut(s)	83, 710
ScrFI	CCNGG	3 cut(s)	102, 188, 228
SduI	GDGCHC	1 cut(s)	351
SexAI	ACCWGGT	1 cut(s)	100
SfaNI	GCATC	1 cut(s)	847
SfcI	CTRYAG	1 cut(s)	802
Sfr274I	CTCGAG	1 cut(s)	542
SfuI	TTCGAA	1 cut(s)	985
SinI	GGWCC	2 cut(s)	184, 304
SlaI	CTCGAG	1 cut(s)	542
SmiMI	CAYNNNNRTG	1 cut(s)	600
SmlI	CTYRAG	1 cut(s)	542
SmoI	CTYRAG	1 cut(s)	542
Sse9I	AATT	4 cut(s)	33, 236, 717, 956
SsiI	CCGC	3 cut(s)	149, 815, 876
StyD4I	CCNGG	3 cut(s)	100, 186, 226
StyI	CCWWGG	1 cut(s)	427
TaiI	ACGT	3 cut(s)	502, 589, 840
TaqI	TCGA	3 cut(s)	318, 543, 985
TasI	AATT	4 cut(s)	33, 236, 717, 956
TfiI	GAWTC	6 cut(s)	15, 370, 396, 418, 665, 936
Tru1I	TTAA	2 cut(s)	681, 822
Tru9I	TTAA	2 cut(s)	681, 822
TscAI	CASTG	1 cut(s)	428
TseFI	GTSAC	2 cut(s)	376, 500
TseI	GCWGC	2 cut(s)	529, 801
Tsp45I	GTSAC	2 cut(s)	376, 500
TspDTI	ATGAA	6 cut(s)	17, 229, 431, 598, 969, 1044
TspGWI	ACGGA	2 cut(s)	115, 395
TspRI	CASTG	1 cut(s)	428
VpaK11BI	GGWCC	2 cut(s)	184, 304
XapI	RAATTY	4 cut(s)	33, 236, 717, 956
XceI	RCATGY	2 cut(s)	262, 946
XhoI	CTCGAG	1 cut(s)	542
XmnI	GAANNNNTTC	1 cut(s)	477
ZraI	GACGTC	1 cut(s)	500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.