Rw6G041500

acetyltransferase At3g50280-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
65192136 .. 65193503
1368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G041500.1

Sequence Viewer

Length: 1314 bp
ATGGAGTCCCCAAATGTCAAACACATCTCAGAATGCTTTATCCAACCTCACAATGCTTCGAAAGAATCAAAGAAGCCCTTTTATTTGACCCCCACAGACCTCGCCATGCTCTCCGAGCACTATATCCAGAAAGGTCTCCTCTTCACCAAACCTCCAAAAGCCAACAACCCTAATTTTCTTGACACCCTTTTGGCGAAACTGAAGTACTCTCTTTCCCTCGCACTCGTTCACTTCTACCCGCTAGCGGGTCGCCTTGTGACCAAGAAAGAACAAGACCCTCATCTCTACTTGGTCTATGTGGATTGCAGCAATAGCCCTGGAGCTAAATTCATCCATGCTTCTCTTGACATGTCCATCTCGGACATTCTTTCCCCAACTGATGTGCCCTTGGTGGTTCAGTCCTTGTTTGATCACGACAGGGAGGTCAACCACGACGGACACACCACGTCGTTGTTGACGGCTCAAGTCACGGAATTGGTGGACGGCGTTTTCATCGGGTTATCAATGAACCATTGTCTCGGTGACGGAACATCTTACTGGAATTTCTTCAACACTTGGTCTGAAATTTTCCAAGCGCAAGAAAACAATGTCACTCTTTCCAAGATCTCCAATCCACCAGTGTTGGATCGGTGGTTTCCAGAAGGTCATGGTCCGATTATCAGCCTTCCTTTCACAGACCCAAGTGAGTTCATTGACAGAGTCGAAGCACCAAAACTCAGAGAGAGAATGTTTCATTTCTCCGCAGAATCCCTAGCCAAACTCAAAGCCAAGGCCAATTCAGAGAACGAGACCAGCAACATCTCCACCTTCCAGGCCTTGTCTGCGCTTCTCTGGAGGACTATAACTCGAGCGCCAAGATTGGACCCGCCATTGCCTCCGAATTACTTTGGCAACGCCATTTATCCGATCAAATCAGAACTGATCAATGCTGGTGAGTTGCTTGATCATGGGCTTGGATGGGCCGCGTGGAAATTGCACCAGGCTGTGGTTAACCTCAATGACCAAGTACTAAAACGGTATCTTGATTACTGGTTAAAGTCTCCGACTGTGTTTACTATGCGATATTTCGATCCATTTAGTGTGATGATGGGGAGTAGTCCGAGATTCGACATGTATAAAAATGAATTTGGGCTGGGAAAAGCTGTGGCTCTACGAAGTGGGTATGCCAACAAGTTTAGTGGCAAAGTGTCGTCGTTTCAAGGGCGCGAAGCAGGAAGCGTTGACTTGGAGGTGTGTCTTCTTCCAGAGGTAATGAGGGCTCTTGAATCTGATGATGAGTTTATGGAAGCTGCCTCTGTACCAAGTTATGAGTAG

Protein Analysis

437

Amino Acids

49.18

Weight (kDa)

5.8

Isoelectric Point (pI)

38.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 6 - 428 1.5e-59 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 422
AccB7I CCANNNNNTGG 1 cut(s) 985
AccII CGCG 2 cut(s) 965, 1206
AciI CCGC 5 cut(s) 239, 245, 741, 866, 963
AclWI GGATC 2 cut(s) 633, 1064
AcsI RAATTY 4 cut(s) 326, 541, 564, 1124
AcuI CTGAAG 1 cut(s) 221
AfaI GTAC 3 cut(s) 206, 1008, 1299
AfiI CCNNNNNNNGG 3 cut(s) 244, 245, 985
AflIII ACRYGT 2 cut(s) 348, 1110
AgsI TTSAA 3 cut(s) 550, 1199, 1265
AjiI CACGTC 1 cut(s) 447
AjnI CCWGG 3 cut(s) 316, 810, 978
AluBI AGCT 3 cut(s) 323, 1142, 1289
AluI AGCT 3 cut(s) 323, 1142, 1289
Alw21I GWGCWC 1 cut(s) 120
Alw26I GTCTC 4 cut(s) 140, 521, 782, 1044
AlwI GGATC 2 cut(s) 633, 1064
Ama87I CYCGRG 1 cut(s) 846
AoxI GGCC 3 cut(s) 771, 813, 960
ApeKI GCWGC 2 cut(s) 306, 1289
ApoI RAATTY 4 cut(s) 326, 541, 564, 1124
Asp700I GAANNNNTTC 1 cut(s) 545
AspLEI GCGC 4 cut(s) 577, 826, 853, 1206
AspS9I GGNCC 3 cut(s) 650, 862, 960
AsuHPI GGTGA 3 cut(s) 136, 533, 944
AsuII TTCGAA 1 cut(s) 59
AsuNHI GCTAGC 1 cut(s) 241
AvaI CYCGRG 1 cut(s) 846
AvaII GGWCC 2 cut(s) 650, 862
BaeGI GKGCMC 1 cut(s) 387
BanII GRGCYC 1 cut(s) 1261
BbsI GAAGAC 1 cut(s) 1229
Bbv12I GWGCWC 1 cut(s) 120
BbvI GCAGC 2 cut(s) 318, 1276
BccI CCATC 3 cut(s) 362, 951, 1081
BceAI ACGGC 2 cut(s) 474, 499
BciT130I CCWGG 3 cut(s) 318, 812, 980
BclI TGATCA 3 cut(s) 409, 921, 943
BcoDI GTCTC 4 cut(s) 140, 521, 782, 1044
BfaI CTAG 2 cut(s) 242, 752
BfoI RGCGCY 1 cut(s) 854
BglII AGATCT 1 cut(s) 603
BisI GCNGC 3 cut(s) 307, 963, 1290
BlsI GCNGC 3 cut(s) 308, 964, 1291
BmcAI AGTACT 2 cut(s) 206, 1008
Bme1390I CCNGG 3 cut(s) 318, 812, 980
Bme18I GGWCC 2 cut(s) 650, 862
BmeT110I CYCGRG 1 cut(s) 846
BmgBI CACGTC 1 cut(s) 447
BmgT120I GGNCC 3 cut(s) 650, 862, 960
BmiI GGNNCC 1 cut(s) 864
BmrFI CCNGG 3 cut(s) 318, 812, 980
BmtI GCTAGC 1 cut(s) 245
BpiI GAAGAC 1 cut(s) 1229
BpmI CTGGAG 2 cut(s) 339, 853
Bpu14I TTCGAA 1 cut(s) 59
BpuEI CTTGAG 1 cut(s) 447
BsaI GGTCTC 2 cut(s) 140, 782
BsaJI CCNNGG 3 cut(s) 316, 387, 768
BsaXI ACNNNNNCTCC 2 cut(s) 136, 166
Bsc4I CCNNNNNNNGG 3 cut(s) 244, 245, 985
Bse1I ACTGG 3 cut(s) 542, 617, 1034
Bse3DI GCAATG 1 cut(s) 869
BseBI CCWGG 3 cut(s) 318, 812, 980
BseDI CCNNGG 3 cut(s) 316, 387, 768
BseGI GGATG 2 cut(s) 330, 962
BseLI CCNNNNNNNGG 3 cut(s) 244, 245, 985
BseMI GCAATG 1 cut(s) 869
BseMII CTCAG 2 cut(s) 42, 730
BseNI ACTGG 3 cut(s) 542, 617, 1034
BseRI GAGGAG 1 cut(s) 128
BseSI GKGCMC 1 cut(s) 387
BseXI GCAGC 2 cut(s) 318, 1276
BseYI CCCAGC 1 cut(s) 1132
Bsh1236I CGCG 2 cut(s) 965, 1206
BshFI GGCC 3 cut(s) 773, 815, 962
BsiHKAI GWGCWC 1 cut(s) 120
BsiHKCI CYCGRG 1 cut(s) 846
BslI CCNNNNNNNGG 3 cut(s) 244, 245, 985
BsmAI GTCTC 4 cut(s) 140, 521, 782, 1044
BsmI GAATGC 1 cut(s) 38
BsnI GGCC 3 cut(s) 773, 815, 962
Bso31I GGTCTC 2 cut(s) 140, 782
BsoBI CYCGRG 1 cut(s) 846
Bsp119I TTCGAA 1 cut(s) 59
Bsp1286I GDGCHC 3 cut(s) 120, 387, 1261
Bsp143I GATC 7 cut(s) 409, 603, 625, 906, 921, 943, 1069
BspACI CCGC 5 cut(s) 239, 245, 741, 866, 963
BspANI GGCC 3 cut(s) 773, 815, 962
BspCNI CTCAG 2 cut(s) 41, 729
BspFNI CGCG 2 cut(s) 965, 1206
BspLI GGNNCC 1 cut(s) 864
BspOI GCTAGC 1 cut(s) 245
BspPI GGATC 2 cut(s) 633, 1064
BspT104I TTCGAA 1 cut(s) 59
BspTNI GGTCTC 2 cut(s) 140, 782
BsrDI GCAATG 1 cut(s) 869
BsrI ACTGG 3 cut(s) 542, 617, 1034
BssECI CCNNGG 3 cut(s) 316, 387, 768
BssMI GATC 7 cut(s) 409, 603, 625, 906, 921, 943, 1069
BssT1I CCWWGG 2 cut(s) 387, 768
Bst2UI CCWGG 3 cut(s) 318, 812, 980
Bst4CI ACNGT 2 cut(s) 1017, 1048
Bst6I CTCTTC 1 cut(s) 146
BstBI TTCGAA 1 cut(s) 59
BstC8I GCNNGC 1 cut(s) 243
BstDEI CTNAG 2 cut(s) 28, 716
BstF5I GGATG 2 cut(s) 330, 962
BstFNI CGCG 2 cut(s) 965, 1206
BstH2I RGCGCY 1 cut(s) 854
BstHHI GCGC 4 cut(s) 577, 826, 853, 1206
BstKTI GATC 7 cut(s) 412, 606, 628, 909, 924, 946, 1072
BstMAI GTCTC 4 cut(s) 140, 521, 782, 1044
BstMBI GATC 7 cut(s) 409, 603, 625, 906, 921, 943, 1069
BstMWI GCNNNNNNNGC 3 cut(s) 115, 312, 821
BstNI CCWGG 3 cut(s) 318, 812, 980
BstNSI RCATGY 2 cut(s) 352, 1114
BstSCI CCNGG 3 cut(s) 316, 810, 978
BstSLI GKGCMC 1 cut(s) 387
BstUI CGCG 2 cut(s) 965, 1206
BstV1I GCAGC 2 cut(s) 318, 1276
BstV2I GAAGAC 1 cut(s) 1229
BstX2I RGATCY 1 cut(s) 603
BstYI RGATCY 1 cut(s) 603
BsuRI GGCC 3 cut(s) 773, 815, 962
BtrI CACGTC 1 cut(s) 447
BtsCI GGATG 2 cut(s) 330, 962
BtsIMutI CAGTG 1 cut(s) 624
Cac8I GCNNGC 1 cut(s) 243
CfoI GCGC 4 cut(s) 577, 826, 853, 1206
Cfr13I GGNCC 3 cut(s) 650, 862, 960
Csp6I GTAC 3 cut(s) 205, 1007, 1298
CspCI CAANNNNNGTGG 4 cut(s) 603, 638, 1159, 1194
CviAII CATG 6 cut(s) 106, 335, 349, 647, 947, 1111
CviQI GTAC 3 cut(s) 205, 1007, 1298
DdeI CTNAG 2 cut(s) 28, 716
DpnI GATC 7 cut(s) 411, 605, 627, 908, 923, 945, 1071
DpnII GATC 7 cut(s) 409, 603, 625, 906, 921, 943, 1069
DrdI GACNNNNNNGTC 1 cut(s) 422
DseDI GACNNNNNNGTC 1 cut(s) 422
Eam1104I CTCTTC 1 cut(s) 146
EarI CTCTTC 1 cut(s) 146
Eco130I CCWWGG 2 cut(s) 387, 768
Eco147I AGGCCT 1 cut(s) 815
Eco24I GRGCYC 1 cut(s) 1261
Eco31I GGTCTC 2 cut(s) 140, 782
Eco47I GGWCC 2 cut(s) 650, 862
Eco57I CTGAAG 1 cut(s) 221
Eco88I CYCGRG 1 cut(s) 846
EcoRII CCWGG 3 cut(s) 316, 810, 978
EcoT14I CCWWGG 2 cut(s) 387, 768
EcoT38I GRGCYC 1 cut(s) 1261
ErhI CCWWGG 2 cut(s) 387, 768
FaeI CATG 6 cut(s) 109, 338, 352, 650, 950, 1114
FalI AAGNNNNNCTT 2 cut(s) 62, 94
FatI CATG 6 cut(s) 105, 334, 348, 646, 946, 1110
FauI CCCGC 3 cut(s) 238, 246, 873
FbaI TGATCA 3 cut(s) 409, 921, 943
Fnu4HI GCNGC 3 cut(s) 307, 963, 1290
FokI GGATG 2 cut(s) 317, 969
FriOI GRGCYC 1 cut(s) 1261
Fsp4HI GCNGC 3 cut(s) 307, 963, 1290
FspBI CTAG 2 cut(s) 242, 752
GlaI GCGC 4 cut(s) 576, 825, 852, 1205
GluI GCNGC 3 cut(s) 307, 963, 1290
GsaI CCCAGC 1 cut(s) 1136
GsuI CTGGAG 2 cut(s) 339, 853
HaeII RGCGCY 1 cut(s) 854
HaeIII GGCC 3 cut(s) 773, 815, 962
HhaI GCGC 4 cut(s) 577, 826, 853, 1206
Hin1II CATG 6 cut(s) 109, 338, 352, 650, 950, 1114
Hin6I GCGC 4 cut(s) 575, 824, 851, 1204
HinP1I GCGC 4 cut(s) 575, 824, 851, 1204
HincII GTYRAC 4 cut(s) 427, 456, 991, 1222
HindII GTYRAC 4 cut(s) 427, 456, 991, 1222
HinfI GANTC 6 cut(s) 5, 65, 699, 746, 1104, 1265
HpaI GTTAAC 1 cut(s) 991
HphI GGTGA 3 cut(s) 136, 533, 944
Hpy166II GTNNAC 7 cut(s) 229, 427, 456, 481, 991, 1053, 1222
Hpy188III TCNNGA 9 cut(s) 127, 179, 344, 413, 638, 832, 1022, 1244, 1262
Hpy8I GTNNAC 7 cut(s) 229, 427, 456, 481, 991, 1053, 1222
Hpy99I CGWCG 3 cut(s) 437, 451, 1195
HpyAV CCTTC 3 cut(s) 635, 674, 817
HpyCH4III ACNGT 2 cut(s) 1017, 1048
HpyCH4IV ACGT 1 cut(s) 446
HpyCH4V TGCA 2 cut(s) 306, 976
HpyF10VI GCNNNNNNNGC 3 cut(s) 115, 312, 821
HpyF3I CTNAG 2 cut(s) 28, 716
HpySE526I ACGT 1 cut(s) 446
Hsp92II CATG 6 cut(s) 109, 338, 352, 650, 950, 1114
HspAI GCGC 4 cut(s) 575, 824, 851, 1204
Ksp22I TGATCA 3 cut(s) 409, 921, 943
KspAI GTTAAC 1 cut(s) 991
Kzo9I GATC 7 cut(s) 409, 603, 625, 906, 921, 943, 1069
LmnI GCTCC 1 cut(s) 320
Lsp1109I GCAGC 2 cut(s) 318, 1276
MaeI CTAG 2 cut(s) 242, 752
MaeII ACGT 1 cut(s) 446
MaeIII GTNAC 4 cut(s) 256, 466, 521, 589
MalI GATC 7 cut(s) 411, 605, 627, 908, 923, 945, 1071
MboI GATC 7 cut(s) 409, 603, 625, 906, 921, 943, 1069
MboII GAAGA 4 cut(s) 133, 538, 1229, 1232
MflI RGATCY 1 cut(s) 603
MhlI GDGCHC 3 cut(s) 120, 387, 1261
MluCI AATT 9 cut(s) 172, 326, 473, 541, 564, 775, 880, 971, 1124
MlyI GAGTC 2 cut(s) 14, 708
MmeI TCCRAC 3 cut(s) 67, 603, 1067
MroXI GAANNNNTTC 1 cut(s) 545
MseI TTAA 2 cut(s) 990, 1034
MspR9I CCNGG 3 cut(s) 318, 812, 980
Mva1269I GAATGC 1 cut(s) 38
MvaI CCWGG 3 cut(s) 318, 812, 980
MvnI CGCG 2 cut(s) 965, 1206
MwoI GCNNNNNNNGC 3 cut(s) 115, 312, 821
NdeII GATC 7 cut(s) 409, 603, 625, 906, 921, 943, 1069
NheI GCTAGC 1 cut(s) 241
NlaIII CATG 6 cut(s) 109, 338, 352, 650, 950, 1114
NlaIV GGNNCC 1 cut(s) 864
NmuCI GTSAC 4 cut(s) 256, 466, 521, 589
NspI RCATGY 2 cut(s) 352, 1114
NspV TTCGAA 1 cut(s) 59
PaeR7I CTCGAG 1 cut(s) 846
PceI AGGCCT 1 cut(s) 815
PciI ACATGT 2 cut(s) 348, 1110
PctI GAATGC 1 cut(s) 38
PdmI GAANNNNTTC 1 cut(s) 545
PfeI GAWTC 4 cut(s) 65, 746, 1104, 1265
PflFI GACNNNGTC 1 cut(s) 698
PflMI CCANNNNNTGG 1 cut(s) 985
PkrI GCNGC 3 cut(s) 308, 964, 1291
PleI GAGTC 2 cut(s) 13, 707
PpsI GAGTC 2 cut(s) 13, 707
PscI ACATGT 2 cut(s) 348, 1110
Psp6I CCWGG 3 cut(s) 316, 810, 978
PspFI CCCAGC 1 cut(s) 1132
PspGI CCWGG 3 cut(s) 316, 810, 978
PspN4I GGNNCC 1 cut(s) 864
PspPI GGNCC 3 cut(s) 650, 862, 960
PspXI VCTCGAGB 1 cut(s) 846
PsuI RGATCY 1 cut(s) 603
PsyI GACNNNGTC 1 cut(s) 698
RsaI GTAC 3 cut(s) 206, 1008, 1299
RsaNI GTAC 3 cut(s) 205, 1007, 1298
SaqAI TTAA 2 cut(s) 990, 1034
SatI GCNGC 3 cut(s) 307, 963, 1290
Sau3AI GATC 7 cut(s) 409, 603, 625, 906, 921, 943, 1069
Sau96I GGNCC 3 cut(s) 650, 862, 960
ScaI AGTACT 2 cut(s) 206, 1008
SchI GAGTC 2 cut(s) 14, 708
ScrFI CCNGG 3 cut(s) 318, 812, 980
SduI GDGCHC 3 cut(s) 120, 387, 1261
Sfr274I CTCGAG 1 cut(s) 846
SfuI TTCGAA 1 cut(s) 59
SinI GGWCC 2 cut(s) 650, 862
SlaI CTCGAG 1 cut(s) 846
SmlI CTYRAG 2 cut(s) 462, 846
SmoI CTYRAG 2 cut(s) 462, 846
Sse9I AATT 9 cut(s) 172, 326, 473, 541, 564, 775, 880, 971, 1124
SseBI AGGCCT 1 cut(s) 815
SsiI CCGC 5 cut(s) 239, 245, 741, 866, 963
SspMI CTAG 2 cut(s) 242, 752
StuI AGGCCT 1 cut(s) 815
StyD4I CCNGG 3 cut(s) 316, 810, 978
StyI CCWWGG 2 cut(s) 387, 768
TaaI ACNGT 2 cut(s) 1017, 1048
TaiI ACGT 1 cut(s) 449
TaqI TCGA 5 cut(s) 59, 702, 847, 1068, 1107
TasI AATT 9 cut(s) 172, 326, 473, 541, 564, 775, 880, 971, 1124
TatI WGTACW 2 cut(s) 204, 1006
TauI GCSGC 1 cut(s) 965
TfiI GAWTC 4 cut(s) 65, 746, 1104, 1265
Tru1I TTAA 2 cut(s) 990, 1034
Tru9I TTAA 2 cut(s) 990, 1034
TscAI CASTG 1 cut(s) 624
TseFI GTSAC 4 cut(s) 256, 466, 521, 589
TseI GCWGC 2 cut(s) 306, 1289
Tsp45I GTSAC 4 cut(s) 256, 466, 521, 589
TspDTI ATGAA 6 cut(s) 319, 481, 521, 679, 722, 1137
TspGWI ACGGA 3 cut(s) 450, 485, 540
TspRI CASTG 1 cut(s) 624
Tth111I GACNNNGTC 1 cut(s) 698
Van91I CCANNNNNTGG 1 cut(s) 985
VpaK11BI GGWCC 2 cut(s) 650, 862
XapI RAATTY 4 cut(s) 326, 541, 564, 1124
XceI RCATGY 2 cut(s) 352, 1114
XhoI CTCGAG 1 cut(s) 846
XmnI GAANNNNTTC 1 cut(s) 545
XspI CTAG 2 cut(s) 242, 752
ZrmI AGTACT 2 cut(s) 206, 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.