Rh6AG475000

acetyltransferase At3g50280-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
65660488 .. 65662501
2014 bp
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UTR
Exon/CDS
Intron
Rh6AG475000.1

Sequence Viewer

Length: 1380 bp
ATGGCTTCCCCAAATGTCAAACACATCTCAGAGTGCTTCATCCAGCCACACTATGCTTCCCAAGAATCGAAGCAATCCTTTTACTTGACCCCCACTGACCTCGCCATGCTCTCCGCCCACTATATCCAGAAAGGCCTCCTCTTCAACAAACCTCCTGAAGCCAACAGCCCCAATTTTCTCGATACCCTTTTGGCGAAACTGAAGTACTCTCTTTCCCTCGCACTCGTTCACTTCTACCCCCTCGCCGGTCGCCTTGTGACCAAGAAAGAACAAGACCCTCATCTCTACTTGGTGTACGTGGATTGCAGCAACAGCCCCGGAGCCAAGTTCATCCATGCTTCTCTTGACATGTCCATCTCCGACATTCTTTCCCCAACTGATGTGCCCTTGGTGGTTCAGTCCTTGTTTGATCACGACAGGGCGGTCAACCACGACGGCCACACCATGTCACTGCTGACGGCTCAAGTCACAGAATTGGTGGACGGCGTTTTCATCGGGCTGTCAATGAATCATGCAGTGGGAGACGGAACATCTTACTGGCATTTCTTCAACACTTGGTCTGAAAATTTCCAAGCACAAGAAAAGAATGTCCTGATTTCAGAGAATATTTCCAACCCACCAGTGTTGGATCGGTGGTTTCTAGAAGGTCATGGTCCGATTATCAGCCTGCCTTTCACCGACCCAAGTGAGTTCATTGACAGATTCGAAGCACCAAAACTCAGAGAGAGAATGTTTCACTTCTCCGAAGAATCCCTAGCCAAACTCAAAGCCAAGGCCAATTCAGAGTGCGACACCAGCAAAATCTCCTCCTTCCAGGCCTTGTCTGCGCTTCTCTGGAGGACTATTACTCGAGCGCGTCTTCTGCCACCAGATCAAGAAACCAGTTGTAGATTGGCTGCGAATAGTAGAGCAAGATTAGACCCGCCATTGCCTCCAAATTACTTTGGCAACTCAATTTATCCTATCAGATCTGAAGTGATCAAATCTGGTGAGTTGCTTGAACACGGGCTTGGATGGGCGGCGTGGAAATTGCACCAGGCTGTGGTTAACCTCAATGACCAAGCACTAAAAGGATTTCTTACTGAATGGTTACAGTCTCCCACTGTGTTTACTCTGCGATTTTTCGATCCATTTAGCGTGATGATGGGGAGTAGTCCGAGATTTGACATGTATAAAAATGAATTTGGGATGGGAAAAGCTATGGCGCTACGAAGTGGGTATGCCAACAAGTTCAGTGGCAAAGTGTCTTCGTTTCAAGGGCGCGAAGCAGGAAGCATCGACTTGGAGGTGTGTCTTCCTCCGAAGGTAATGAGGGCTCTCGAATCTGATTATGAATTTATGGAAGCTGCCTCTGCACCAAGTTATGAGTGGTCAAGCTAG

Protein Analysis

459

Amino Acids

51.54

Weight (kDa)

5.93

Isoelectric Point (pI)

48.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 7 - 447 1.3e-71 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 422
AccB7I CCANNNNNTGG 1 cut(s) 1042
AccII CGCG 2 cut(s) 856, 1263
AciI CCGC 4 cut(s) 114, 422, 923, 1019
AclWI GGATC 2 cut(s) 636, 1121
AcoI YGGCCR 1 cut(s) 436
AcsI RAATTY 3 cut(s) 565, 1181, 1334
AcuI CTGAAG 3 cut(s) 177, 221, 993
AfaI GTAC 2 cut(s) 206, 296
AfiI CCNNNNNNNGG 2 cut(s) 245, 1042
AflIII ACRYGT 2 cut(s) 348, 1167
AgsI TTSAA 4 cut(s) 145, 550, 1001, 1256
AjnI CCWGG 2 cut(s) 813, 1035
AjuI GAANNNNNNNTTGG 2 cut(s) 993, 1025
AluBI AGCT 3 cut(s) 1199, 1346, 1377
AluI AGCT 3 cut(s) 1199, 1346, 1377
Alw26I GTCTC 2 cut(s) 516, 1101
AlwI GGATC 2 cut(s) 636, 1121
Ama87I CYCGRG 1 cut(s) 849
AoxI GGCC 4 cut(s) 133, 436, 774, 816
ApeKI GCWGC 3 cut(s) 306, 896, 1346
ApoI RAATTY 3 cut(s) 565, 1181, 1334
AspLEI GCGC 4 cut(s) 829, 856, 1207, 1263
AspS9I GGNCC 1 cut(s) 653
AsuC2I CCSGG 1 cut(s) 318
AsuHPI GGTGA 2 cut(s) 667, 1001
AsuII TTCGAA 1 cut(s) 705
AvaI CYCGRG 1 cut(s) 849
AvaII GGWCC 1 cut(s) 653
BaeGI GKGCMC 1 cut(s) 387
BanII GRGCYC 1 cut(s) 1318
BbsI GAAGAC 3 cut(s) 851, 1239, 1286
BbvI GCAGC 3 cut(s) 318, 883, 1333
BccI CCATC 4 cut(s) 362, 1008, 1138, 1183
BceAI ACGGC 3 cut(s) 451, 474, 499
BciT130I CCWGG 2 cut(s) 815, 1037
BclI TGATCA 2 cut(s) 409, 978
BcnI CCSGG 1 cut(s) 318
BcoDI GTCTC 2 cut(s) 516, 1101
BfaI CTAG 3 cut(s) 641, 755, 1378
BfoI RGCGCY 1 cut(s) 1208
BglII AGATCT 1 cut(s) 968
BisI GCNGC 4 cut(s) 307, 897, 1020, 1347
BlsI GCNGC 4 cut(s) 308, 898, 1021, 1348
BmcAI AGTACT 1 cut(s) 206
Bme1390I CCNGG 3 cut(s) 318, 815, 1037
Bme18I GGWCC 1 cut(s) 653
BmeT110I CYCGRG 1 cut(s) 849
BmgT120I GGNCC 1 cut(s) 653
BmiI GGNNCC 1 cut(s) 322
BmrFI CCNGG 3 cut(s) 318, 815, 1037
BmsI GCATC 1 cut(s) 1284
BpiI GAAGAC 3 cut(s) 851, 1239, 1286
BpmI CTGGAG 1 cut(s) 856
Bpu14I TTCGAA 1 cut(s) 705
BpuEI CTTGAG 1 cut(s) 447
BpuMI CCSGG 1 cut(s) 318
BsaAI YACGTR 1 cut(s) 298
BsaJI CCNNGG 3 cut(s) 316, 387, 771
Bsc4I CCNNNNNNNGG 2 cut(s) 245, 1042
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 3 cut(s) 542, 620, 882
Bse3DI GCAATG 1 cut(s) 926
BseBI CCWGG 2 cut(s) 815, 1037
BseDI CCNNGG 3 cut(s) 316, 387, 771
BseGI GGATG 4 cut(s) 39, 330, 1019, 1194
BseLI CCNNNNNNNGG 2 cut(s) 245, 1042
BseMI GCAATG 1 cut(s) 926
BseMII CTCAG 2 cut(s) 42, 733
BseNI ACTGG 3 cut(s) 542, 620, 882
BseRI GAGGAG 2 cut(s) 128, 796
BseSI GKGCMC 1 cut(s) 387
BseXI GCAGC 3 cut(s) 318, 883, 1333
BsgI GTGCAG 1 cut(s) 1338
Bsh1236I CGCG 2 cut(s) 856, 1263
Bsh1285I CGRYCG 1 cut(s) 250
BshFI GGCC 4 cut(s) 135, 438, 776, 818
BsiEI CGRYCG 1 cut(s) 250
BsiHKCI CYCGRG 1 cut(s) 849
BsiSI CCGG 2 cut(s) 246, 318
BslI CCNNNNNNNGG 2 cut(s) 245, 1042
BsmAI GTCTC 2 cut(s) 516, 1101
BsmBI CGTCTC 1 cut(s) 516
BsnI GGCC 4 cut(s) 135, 438, 776, 818
BsoBI CYCGRG 1 cut(s) 849
Bsp119I TTCGAA 1 cut(s) 705
Bsp1286I GDGCHC 2 cut(s) 387, 1318
Bsp143I GATC 6 cut(s) 409, 628, 871, 968, 978, 1126
BspACI CCGC 4 cut(s) 114, 422, 923, 1019
BspANI GGCC 4 cut(s) 135, 438, 776, 818
BspCNI CTCAG 2 cut(s) 41, 732
BspFNI CGCG 2 cut(s) 856, 1263
BspLI GGNNCC 1 cut(s) 322
BspPI GGATC 2 cut(s) 636, 1121
BspT104I TTCGAA 1 cut(s) 705
BsrDI GCAATG 1 cut(s) 926
BsrFI RCCGGY 1 cut(s) 245
BsrI ACTGG 3 cut(s) 542, 620, 882
BssAI RCCGGY 1 cut(s) 245
BssECI CCNNGG 3 cut(s) 316, 387, 771
BssMI GATC 6 cut(s) 409, 628, 871, 968, 978, 1126
BssT1I CCWWGG 2 cut(s) 387, 771
Bst2UI CCWGG 2 cut(s) 815, 1037
Bst4CI ACNGT 2 cut(s) 1095, 1105
Bst6I CTCTTC 1 cut(s) 146
BstBAI YACGTR 1 cut(s) 298
BstBI TTCGAA 1 cut(s) 705
BstC8I GCNNGC 1 cut(s) 668
BstDEI CTNAG 2 cut(s) 28, 719
BstF5I GGATG 4 cut(s) 39, 330, 1019, 1194
BstFNI CGCG 2 cut(s) 856, 1263
BstH2I RGCGCY 1 cut(s) 1208
BstHHI GCGC 4 cut(s) 829, 856, 1207, 1263
BstKTI GATC 6 cut(s) 412, 631, 874, 971, 981, 1129
BstMAI GTCTC 2 cut(s) 516, 1101
BstMBI GATC 6 cut(s) 409, 628, 871, 968, 978, 1126
BstMCI CGRYCG 1 cut(s) 250
BstMWI GCNNNNNNNGC 5 cut(s) 312, 795, 824, 862, 1352
BstNI CCWGG 2 cut(s) 815, 1037
BstNSI RCATGY 2 cut(s) 352, 1171
BstSCI CCNGG 3 cut(s) 316, 813, 1035
BstSLI GKGCMC 1 cut(s) 387
BstUI CGCG 2 cut(s) 856, 1263
BstV1I GCAGC 3 cut(s) 318, 883, 1333
BstV2I GAAGAC 3 cut(s) 851, 1239, 1286
BstX2I RGATCY 1 cut(s) 968
BstYI RGATCY 1 cut(s) 968
BsuRI GGCC 4 cut(s) 135, 438, 776, 818
BtsCI GGATG 4 cut(s) 39, 330, 1019, 1194
BtsI GCAGTG 2 cut(s) 449, 522
BtsIMutI CAGTG 6 cut(s) 93, 449, 522, 627, 1101, 1240
Cac8I GCNNGC 1 cut(s) 668
CfoI GCGC 4 cut(s) 829, 856, 1207, 1263
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 1 cut(s) 653
CseI GACGC 1 cut(s) 845
Csp6I GTAC 2 cut(s) 205, 295
CspCI CAANNNNNGTGG 4 cut(s) 606, 641, 1216, 1251
CviAII CATG 7 cut(s) 106, 335, 349, 445, 512, 650, 1168
CviQI GTAC 2 cut(s) 205, 295
DdeI CTNAG 2 cut(s) 28, 719
DpnI GATC 6 cut(s) 411, 630, 873, 970, 980, 1128
DpnII GATC 6 cut(s) 409, 628, 871, 968, 978, 1126
DrdI GACNNNNNNGTC 1 cut(s) 422
DseDI GACNNNNNNGTC 1 cut(s) 422
EaeI YGGCCR 1 cut(s) 436
Eam1104I CTCTTC 1 cut(s) 146
EarI CTCTTC 1 cut(s) 146
EciI GGCGGA 1 cut(s) 103
Eco130I CCWWGG 2 cut(s) 387, 771
Eco147I AGGCCT 2 cut(s) 135, 818
Eco24I GRGCYC 1 cut(s) 1318
Eco47I GGWCC 1 cut(s) 653
Eco57I CTGAAG 3 cut(s) 177, 221, 993
Eco88I CYCGRG 1 cut(s) 849
EcoRII CCWGG 2 cut(s) 813, 1035
EcoT14I CCWWGG 2 cut(s) 387, 771
EcoT38I GRGCYC 1 cut(s) 1318
ErhI CCWWGG 2 cut(s) 387, 771
Esp3I CGTCTC 1 cut(s) 516
FaeI CATG 7 cut(s) 109, 338, 352, 448, 515, 653, 1171
FalI AAGNNNNNCTT 4 cut(s) 62, 94, 1062, 1094
FatI CATG 7 cut(s) 105, 334, 348, 444, 511, 649, 1167
FauI CCCGC 1 cut(s) 930
FbaI TGATCA 2 cut(s) 409, 978
Fnu4HI GCNGC 4 cut(s) 307, 897, 1020, 1347
FokI GGATG 4 cut(s) 26, 317, 1026, 1201
FriOI GRGCYC 1 cut(s) 1318
Fsp4HI GCNGC 4 cut(s) 307, 897, 1020, 1347
FspBI CTAG 3 cut(s) 641, 755, 1378
GlaI GCGC 4 cut(s) 828, 855, 1206, 1262
GluI GCNGC 4 cut(s) 307, 897, 1020, 1347
GsuI CTGGAG 1 cut(s) 856
HaeII RGCGCY 1 cut(s) 1208
HaeIII GGCC 4 cut(s) 135, 438, 776, 818
HapII CCGG 2 cut(s) 246, 318
HgaI GACGC 1 cut(s) 845
HhaI GCGC 4 cut(s) 829, 856, 1207, 1263
Hin1II CATG 7 cut(s) 109, 338, 352, 448, 515, 653, 1171
Hin6I GCGC 4 cut(s) 827, 854, 1205, 1261
HinP1I GCGC 4 cut(s) 827, 854, 1205, 1261
HincII GTYRAC 2 cut(s) 427, 1048
HindII GTYRAC 2 cut(s) 427, 1048
HinfI GANTC 5 cut(s) 65, 508, 702, 749, 1322
HpaI GTTAAC 1 cut(s) 1048
HpaII CCGG 2 cut(s) 246, 318
HphI GGTGA 2 cut(s) 667, 1001
Hpy166II GTNNAC 6 cut(s) 229, 295, 427, 481, 1048, 1110
Hpy8I GTNNAC 6 cut(s) 229, 295, 427, 481, 1048, 1110
Hpy99I CGWCG 1 cut(s) 437
HpyAV CCTTC 3 cut(s) 638, 820, 1297
HpyCH4III ACNGT 2 cut(s) 1095, 1105
HpyCH4IV ACGT 1 cut(s) 297
HpyCH4V TGCA 4 cut(s) 306, 515, 1033, 1355
HpyF10VI GCNNNNNNNGC 5 cut(s) 312, 795, 824, 862, 1352
HpyF3I CTNAG 2 cut(s) 28, 719
HpySE526I ACGT 1 cut(s) 297
Hsp92II CATG 7 cut(s) 109, 338, 352, 448, 515, 653, 1171
HspAI GCGC 4 cut(s) 827, 854, 1205, 1261
Ksp22I TGATCA 2 cut(s) 409, 978
KspAI GTTAAC 1 cut(s) 1048
Kzo9I GATC 6 cut(s) 409, 628, 871, 968, 978, 1126
LmnI GCTCC 1 cut(s) 320
Lsp1109I GCAGC 3 cut(s) 318, 883, 1333
LweI GCATC 1 cut(s) 1284
MaeI CTAG 3 cut(s) 641, 755, 1378
MaeII ACGT 1 cut(s) 297
MaeIII GTNAC 4 cut(s) 256, 447, 466, 1089
MalI GATC 6 cut(s) 411, 630, 873, 970, 980, 1128
MboI GATC 6 cut(s) 409, 628, 871, 968, 978, 1126
MboII GAAGA 6 cut(s) 133, 538, 758, 851, 1239, 1286
MflI RGATCY 1 cut(s) 968
MhlI GDGCHC 2 cut(s) 387, 1318
MluCI AATT 9 cut(s) 172, 473, 565, 778, 937, 954, 1028, 1181, 1334
MmeI TCCRAC 3 cut(s) 384, 606, 636
MseI TTAA 1 cut(s) 1047
MspI CCGG 2 cut(s) 246, 318
MspR9I CCNGG 3 cut(s) 318, 815, 1037
MvaI CCWGG 2 cut(s) 815, 1037
MvnI CGCG 2 cut(s) 856, 1263
MwoI GCNNNNNNNGC 5 cut(s) 312, 795, 824, 862, 1352
NciI CCSGG 1 cut(s) 318
NdeII GATC 6 cut(s) 409, 628, 871, 968, 978, 1126
NlaIII CATG 7 cut(s) 109, 338, 352, 448, 515, 653, 1171
NlaIV GGNNCC 1 cut(s) 322
NmuCI GTSAC 3 cut(s) 256, 447, 466
NspI RCATGY 2 cut(s) 352, 1171
NspV TTCGAA 1 cut(s) 705
PaeR7I CTCGAG 1 cut(s) 849
PceI AGGCCT 2 cut(s) 135, 818
PciI ACATGT 2 cut(s) 348, 1167
PfeI GAWTC 5 cut(s) 65, 508, 702, 749, 1322
PflMI CCANNNNNTGG 1 cut(s) 1042
PkrI GCNGC 4 cut(s) 308, 898, 1021, 1348
Ppu21I YACGTR 1 cut(s) 298
PscI ACATGT 2 cut(s) 348, 1167
Psp6I CCWGG 2 cut(s) 813, 1035
PspGI CCWGG 2 cut(s) 813, 1035
PspN4I GGNNCC 1 cut(s) 322
PspPI GGNCC 1 cut(s) 653
PspXI VCTCGAGB 1 cut(s) 849
PsuI RGATCY 1 cut(s) 968
RsaI GTAC 2 cut(s) 206, 296
RsaNI GTAC 2 cut(s) 205, 295
SaqAI TTAA 1 cut(s) 1047
SatI GCNGC 4 cut(s) 307, 897, 1020, 1347
Sau3AI GATC 6 cut(s) 409, 628, 871, 968, 978, 1126
Sau96I GGNCC 1 cut(s) 653
ScaI AGTACT 1 cut(s) 206
ScrFI CCNGG 3 cut(s) 318, 815, 1037
SduI GDGCHC 2 cut(s) 387, 1318
SfaNI GCATC 1 cut(s) 1284
Sfr274I CTCGAG 1 cut(s) 849
SfuI TTCGAA 1 cut(s) 705
SinI GGWCC 1 cut(s) 653
SlaI CTCGAG 1 cut(s) 849
SmlI CTYRAG 2 cut(s) 462, 849
SmoI CTYRAG 2 cut(s) 462, 849
Sse9I AATT 9 cut(s) 172, 473, 565, 778, 937, 954, 1028, 1181, 1334
SseBI AGGCCT 2 cut(s) 135, 818
SsiI CCGC 4 cut(s) 114, 422, 923, 1019
SspI AATATT 1 cut(s) 607
SspMI CTAG 3 cut(s) 641, 755, 1378
StuI AGGCCT 2 cut(s) 135, 818
StyD4I CCNGG 3 cut(s) 316, 813, 1035
StyI CCWWGG 2 cut(s) 387, 771
TaaI ACNGT 2 cut(s) 1095, 1105
TaiI ACGT 1 cut(s) 300
TaqI TCGA 7 cut(s) 68, 180, 705, 850, 1125, 1278, 1320
TasI AATT 9 cut(s) 172, 473, 565, 778, 937, 954, 1028, 1181, 1334
TatI WGTACW 1 cut(s) 204
TauI GCSGC 1 cut(s) 1022
TfiI GAWTC 5 cut(s) 65, 508, 702, 749, 1322
Tru1I TTAA 1 cut(s) 1047
Tru9I TTAA 1 cut(s) 1047
TscAI CASTG 6 cut(s) 100, 456, 522, 627, 1108, 1240
TseFI GTSAC 3 cut(s) 256, 447, 466
TseI GCWGC 3 cut(s) 306, 896, 1346
Tsp45I GTSAC 3 cut(s) 256, 447, 466
TspDTI ATGAA 7 cut(s) 28, 319, 481, 521, 682, 1194, 1347
TspGWI ACGGA 1 cut(s) 540
TspRI CASTG 6 cut(s) 100, 456, 522, 627, 1108, 1240
Van91I CCANNNNNTGG 1 cut(s) 1042
VpaK11BI GGWCC 1 cut(s) 653
XapI RAATTY 3 cut(s) 565, 1181, 1334
XbaI TCTAGA 1 cut(s) 640
XceI RCATGY 2 cut(s) 352, 1171
XcmI CCANNNNNNNNNTGG 2 cut(s) 889, 1365
XhoI CTCGAG 1 cut(s) 849
XspI CTAG 3 cut(s) 641, 755, 1378
ZrmI AGTACT 1 cut(s) 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.