Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0004079

Physical Location & Seq

Genomic Coordinates Forward (+)

10042163 .. 10043859

Gene Structure 1697 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1113200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1125 bp

ATGGAAGCTCCGGAGTACTACAAGAAAACTTTCTGCCCACAATTCACACCTGAAAAGCGCCACTCCTTCGACAGCAGTAACAACAAGACCGCCGTTGGTGGCGGCGGGGACCACTTTATGGTGGAGGACCTCCTCGACTTTTCCAACGACGACGACGCTGTCATTACCGACGGTGGTTGTCCTGCTGCTTTTGACAACGTCATCGGAAACTCCACCGACTCTTCGCCACTTAACGTCATCGACAGCTGCAATTCGTCCTCCTTATCGGGCTCTGAACCCAATTTCGGGTCCCGGAATCTCGCCGACGGCCCCTTCTCCAGTGACCTCTGCGTCCCGTGCGACGATTTGGCTGAGCTCGAATGGCTGTCGAATTTCGTGGAGGAGTCGTTTTCCAGCGAGGACCTGCAGAAGCTGCAGCTGATATCCGGAATGAAACCCCGACCCGACCAGGCCGCCTTCGAGACCAGCCAATTCCAACCGGACCCCACCCTAACCAATAACAATCCTAATGGCAATAACAACCCGATATTCAACCCGGAAGTTTCGGTCCCCGCCAAGGCCCGAAGCAAGCGGTCCCGGGCCGCCCCGTGCAACTGGACCTCCCGCCTCCTCCTCCTCTCGACTCCGGAGCAATCCGACGTCGTGGTTTCAGCGGCGGAGGCAGCGTCTCCATTACCGCCGCCTTCCAGCACTGGGAAGAAGACTGTGAAGTCGGCACCGAAGAAGAAGGAGAGCCAGGAAGGTTCGGGCGGTGGGCCCGGTGACGGGAGAAAGTGCATGCATTGCGCAACGGACAAGACGCCGCAGTGGCGGACGGGGCCGATGGGTCCGAAGACACTGTGCAACGCGTGCGGGGTTCGATACAAGTCGGGTCGACTAGTGCCGGAGTACCGACCCGCGGCGAGCCCGACGTTCGTGCTGACAAAGCACTCCAACTCGCACCGTAAGGTGCTGGAGTTGCGGCGGCAGAAGGAGATAGTGAGGGCGCAGCAGACTTTCATTCACCAGGTGCCGCCGCCGCATCATCACCACCACCACCATCAGAATATGGTCTTTGACGTATCCAACGGCGGAGATTACTTGATTCATCAGCACGTGGGGCCCGATTTCCGGCAGCTGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905177 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GATA

Protein Analysis

375

Amino Acids

40.86

Weight (kDa)

6.31

Isoelectric Point (pI)

54.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATA	PF00320	259 - 293	3.7e-15	GATA zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32890 AT5G25830
fragaria_vesca	FvH4_2g35450 FvH4_6g32190
malus_domestica	MD08G1113200.v1.1 MD09G1205600.v1.1 MD15G1092500.v1.1 MD17G1185900.v1.1
prunus_persica	Prupe.1G447300_v2.0.a1 Prupe.1G447400_v2.0.a1 Prupe.3G060900_v2.0.a1
pyrus_communis	pycom08g09390 pycom17g19520
rosa_chinensis	RchiOBHm_Chr2g0140091
rosa_laevigata	RLG00000010798 RLG00000019848
rosa_multiflora	Rmu_co8403039.1_g000001 Rmu_sc0002971.1_g000022 Rmu_sc0003244.1_g000030
rosa_roxburghii	Rroxscaffold_2G00105070 Rroxscaffold_7G00161780
rosa_rugosa	Rorug02G0361000.1 Rorug06G0349300
rosa_samantha	Rh2AG411700 Rh2BG422000 Rh2CG397800 Rh2DG431400 Rh6AG461600 Rh6BG439500 Rh6CG475600 Rh6DG462400
rosa_wichuraiana	Rw2G033730 Rw6G040230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	158, 329, 709
AatII	GACGTC	1 cut(s)	642
Acc16I	TGCGCA	1 cut(s)	787
Acc36I	ACCTGC	1 cut(s)	411
AccB1I	GGYRCC	2 cut(s)	715, 1009
AccB7I	CCANNNNNTGG	1 cut(s)	118
AccI	GTMKAC	1 cut(s)	874
AccII	CGCG	2 cut(s)	848, 899
AccIII	TCCGGA	3 cut(s)	10, 425, 625
AcsI	RAATTY	1 cut(s)	370
AcvI	CACGTG	1 cut(s)	1096
AcyI	GRCGYC	2 cut(s)	639, 800
AdeI	CACNNNGTG	1 cut(s)	1009
AfaI	GTAC	2 cut(s)	17, 890
AfiI	CCNNNNNNNGG	9 cut(s)	118, 284, 285, 556, 693, 764, 765, 898, 1110
AflIII	ACRYGT	1 cut(s)	846
AgsI	TTSAA	1 cut(s)	532
AhlI	ACTAGT	1 cut(s)	877
AjnI	CCWGG	3 cut(s)	447, 735, 1005
AluBI	AGCT	6 cut(s)	8, 246, 355, 412, 418, 1117
AluI	AGCT	6 cut(s)	8, 246, 355, 412, 418, 1117
Alw21I	GWGCWC	1 cut(s)	357
Alw26I	GTCTC	2 cut(s)	455, 672
AlwNI	CAGNNNCTG	1 cut(s)	412
Ama87I	CYCGRG	1 cut(s)	576
Aor13HI	TCCGGA	3 cut(s)	10, 425, 625
AoxI	GGCC	7 cut(s)	307, 450, 558, 579, 755, 818, 1100
ApaI	GGGCCC	2 cut(s)	759, 1104
ApeKI	GCWGC	7 cut(s)	185, 246, 412, 415, 662, 988, 1114
ApoI	RAATTY	1 cut(s)	370
Asp700I	GAANNNNTTC	1 cut(s)	29
AspLEI	GCGC	3 cut(s)	60, 788, 988
AsuC2I	CCSGG	5 cut(s)	292, 536, 577, 578, 759
AsuHPI	GGTGA	3 cut(s)	773, 995, 1019
AvaI	CYCGRG	1 cut(s)	576
AvaII	GGWCC	9 cut(s)	109, 127, 288, 400, 481, 547, 573, 597, 827
BaeGI	GKGCMC	2 cut(s)	759, 1104
BanI	GGYRCC	2 cut(s)	715, 1009
BanII	GRGCYC	5 cut(s)	272, 357, 759, 908, 1104
BbrPI	CACGTG	1 cut(s)	1096
BbsI	GAAGAC	2 cut(s)	707, 839
Bbv12I	GWGCWC	1 cut(s)	357
BbvI	GCAGC	6 cut(s)	172, 233, 399, 427, 674, 1000
BccI	CCATC	2 cut(s)	817, 1047
BceAI	ACGGC	3 cut(s)	77, 322, 1084
BcgI	CGANNNNNNTGC	2 cut(s)	898, 932
BciT130I	CCWGG	3 cut(s)	449, 737, 1007
BciVI	GTATCC	1 cut(s)	1072
BcnI	CCSGG	5 cut(s)	292, 536, 577, 578, 759
BcoDI	GTCTC	2 cut(s)	455, 672
BcuI	ACTAGT	1 cut(s)	877
BfaI	CTAG	2 cut(s)	878, 1123
BfmI	CTRYAG	2 cut(s)	404, 413
BfoI	RGCGCY	1 cut(s)	61
BfuAI	ACCTGC	1 cut(s)	411
BfuI	GTATCC	1 cut(s)	1072
BglI	GCCNNNNNGGC	1 cut(s)	808
BlpI	GCTNAGC	1 cut(s)	351
BmcAI	AGTACT	1 cut(s)	17
Bme1390I	CCNGG	8 cut(s)	292, 449, 536, 577, 578, 737, 759, 1007
Bme18I	GGWCC	9 cut(s)	109, 127, 288, 400, 481, 547, 573, 597, 827
BmeT110I	CYCGRG	1 cut(s)	576
BmrFI	CCNGG	8 cut(s)	292, 449, 536, 577, 578, 737, 759, 1007
BmrI	ACTGGG	1 cut(s)	702
BmsI	GCATC	1 cut(s)	1030
BmuI	ACTGGG	1 cut(s)	702
BpiI	GAAGAC	2 cut(s)	707, 839
BpmI	CTGGAG	2 cut(s)	301, 974
Bpu1102I	GCTNAGC	1 cut(s)	351
BpuMI	CCSGG	5 cut(s)	292, 536, 577, 578, 759
BsaAI	YACGTR	1 cut(s)	1096
BsaHI	GRCGYC	2 cut(s)	639, 800
BsaI	GGTCTC	1 cut(s)	455
BsaJI	CCNNGG	3 cut(s)	555, 576, 897
BsaWI	WCCGGW	4 cut(s)	10, 425, 478, 625
BsaXI	ACNNNNNCTCC	6 cut(s)	371, 401, 584, 614, 650, 680
Bsc4I	CCNNNNNNNGG	9 cut(s)	118, 284, 285, 556, 693, 764, 765, 898, 1110
Bse1I	ACTGG	3 cut(s)	318, 599, 697
Bse3DI	GCAATG	1 cut(s)	781
BseAI	TCCGGA	3 cut(s)	10, 425, 625
BseBI	CCWGG	3 cut(s)	449, 737, 1007
BseDI	CCNNGG	3 cut(s)	555, 576, 897
BseLI	CCNNNNNNNGG	9 cut(s)	118, 284, 285, 556, 693, 764, 765, 898, 1110
BseMI	GCAATG	1 cut(s)	781
BseMII	CTCAG	1 cut(s)	342
BseNI	ACTGG	3 cut(s)	318, 599, 697
BseRI	GAGGAG	5 cut(s)	122, 395, 599, 602, 605
BseSI	GKGCMC	2 cut(s)	759, 1104
BseXI	GCAGC	6 cut(s)	172, 233, 399, 427, 674, 1000
Bsh1236I	CGCG	2 cut(s)	848, 899
BshFI	GGCC	7 cut(s)	309, 452, 560, 581, 757, 820, 1102
BshNI	GGYRCC	2 cut(s)	715, 1009
BsiHKAI	GWGCWC	1 cut(s)	357
BsiHKCI	CYCGRG	1 cut(s)	576
BslFI	GGGAC	5 cut(s)	122, 274, 317, 533, 559
BslI	CCNNNNNNNGG	9 cut(s)	118, 284, 285, 556, 693, 764, 765, 898, 1110
BsmAI	GTCTC	2 cut(s)	455, 672
BsmBI	CGTCTC	1 cut(s)	672
BsmFI	GGGAC	5 cut(s)	122, 274, 317, 533, 559
BsnI	GGCC	7 cut(s)	309, 452, 560, 581, 757, 820, 1102
Bso31I	GGTCTC	1 cut(s)	455
BsoBI	CYCGRG	1 cut(s)	576
Bsp120I	GGGCCC	2 cut(s)	755, 1100
Bsp1286I	GDGCHC	5 cut(s)	272, 357, 759, 908, 1104
Bsp13I	TCCGGA	3 cut(s)	10, 425, 625
Bsp143I	GATC	1 cut(s)	1119
Bsp1720I	GCTNAGC	1 cut(s)	351
BspANI	GGCC	7 cut(s)	309, 452, 560, 581, 757, 820, 1102
BspCNI	CTCAG	1 cut(s)	343
BspEI	TCCGGA	3 cut(s)	10, 425, 625
BspFNI	CGCG	2 cut(s)	848, 899
BspMAI	CTGCAG	2 cut(s)	408, 417
BspMI	ACCTGC	1 cut(s)	411
BspT107I	GGYRCC	2 cut(s)	715, 1009
BspTNI	GGTCTC	1 cut(s)	455
BsrDI	GCAATG	1 cut(s)	781
BsrI	ACTGG	3 cut(s)	318, 599, 697
BssECI	CCNNGG	3 cut(s)	555, 576, 897
BssMI	GATC	1 cut(s)	1119
BssNI	GRCGYC	2 cut(s)	639, 800
BssT1I	CCWWGG	1 cut(s)	555
Bst2UI	CCWGG	3 cut(s)	449, 737, 1007
Bst4CI	ACNGT	4 cut(s)	173, 706, 840, 944
Bst6I	CTCTTC	1 cut(s)	226
BstACI	GRCGYC	2 cut(s)	639, 800
BstAPI	GCANNNNNTGC	3 cut(s)	412, 783, 849
BstBAI	YACGTR	1 cut(s)	1096
BstC8I	GCNNGC	4 cut(s)	569, 779, 850, 904
BstDEI	CTNAG	1 cut(s)	351
BstDSI	CCRYGG	1 cut(s)	897
BstFNI	CGCG	2 cut(s)	848, 899
BstH2I	RGCGCY	1 cut(s)	61
BstHHI	GCGC	3 cut(s)	60, 788, 988
BstKTI	GATC	1 cut(s)	1122
BstMAI	GTCTC	2 cut(s)	455, 672
BstMBI	GATC	1 cut(s)	1119
BstNI	CCWGG	3 cut(s)	449, 737, 1007
BstNSI	RCATGY	1 cut(s)	781
BstSCI	CCNGG	8 cut(s)	290, 447, 534, 575, 576, 735, 757, 1005
BstSFI	CTRYAG	2 cut(s)	404, 413
BstSLI	GKGCMC	2 cut(s)	759, 1104
BstUI	CGCG	2 cut(s)	848, 899
BstV1I	GCAGC	6 cut(s)	172, 233, 399, 427, 674, 1000
BstV2I	GAAGAC	2 cut(s)	707, 839
BsuI	GTATCC	1 cut(s)	1072
BsuRI	GGCC	7 cut(s)	309, 452, 560, 581, 757, 820, 1102
BtgI	CCRYGG	1 cut(s)	897
BtsI	GCAGTG	1 cut(s)	812
BtsIMutI	CAGTG	4 cut(s)	325, 690, 812, 836
BveI	ACCTGC	1 cut(s)	411
Cac8I	GCNNGC	4 cut(s)	569, 779, 850, 904
CaiI	CAGNNNCTG	1 cut(s)	412
CfoI	GCGC	3 cut(s)	60, 788, 988
Cfr42I	CCGCGG	1 cut(s)	900
Cfr9I	CCCGGG	1 cut(s)	576
CseI	GACGC	4 cut(s)	164, 319, 654, 808
CsiI	ACCWGGT	1 cut(s)	1005
Csp6I	GTAC	2 cut(s)	16, 889
CviAII	CATG	1 cut(s)	778
CviQI	GTAC	2 cut(s)	16, 889
DdeI	CTNAG	1 cut(s)	351
DpnI	GATC	1 cut(s)	1121
DpnII	GATC	1 cut(s)	1119
DraIII	CACNNNGTG	1 cut(s)	1009
DrdI	GACNNNNNNGTC	3 cut(s)	158, 329, 709
DseDI	GACNNNNNNGTC	3 cut(s)	158, 329, 709
Eam1104I	CTCTTC	1 cut(s)	226
EarI	CTCTTC	1 cut(s)	226
EciI	GGCGGA	3 cut(s)	671, 826, 1086
Ecl136II	GAGCTC	1 cut(s)	355
Eco130I	CCWWGG	1 cut(s)	555
Eco24I	GRGCYC	5 cut(s)	272, 357, 759, 908, 1104
Eco31I	GGTCTC	1 cut(s)	455
Eco32I	GATATC	1 cut(s)	423
Eco47I	GGWCC	9 cut(s)	109, 127, 288, 400, 481, 547, 573, 597, 827
Eco53kI	GAGCTC	1 cut(s)	355
Eco72I	CACGTG	1 cut(s)	1096
Eco88I	CYCGRG	1 cut(s)	576
EcoICRI	GAGCTC	1 cut(s)	355
EcoO109I	RGGNCCY	4 cut(s)	127, 288, 400, 1100
EcoRII	CCWGG	3 cut(s)	447, 735, 1005
EcoRV	GATATC	1 cut(s)	423
EcoT14I	CCWWGG	1 cut(s)	555
EcoT22I	ATGCAT	1 cut(s)	783
EcoT38I	GRGCYC	5 cut(s)	272, 357, 759, 908, 1104
ErhI	CCWWGG	1 cut(s)	555
Esp3I	CGTCTC	1 cut(s)	672
FaeI	CATG	1 cut(s)	781
FaiI	YATR	3 cut(s)	119, 779, 1049
FaqI	GGGAC	5 cut(s)	122, 274, 317, 533, 559
FatI	CATG	1 cut(s)	777
FauI	CCCGC	5 cut(s)	98, 559, 611, 845, 904
FblI	GTMKAC	1 cut(s)	874
FriOI	GRGCYC	5 cut(s)	272, 357, 759, 908, 1104
FspBI	CTAG	2 cut(s)	878, 1123
FspI	TGCGCA	1 cut(s)	787
GlaI	GCGC	3 cut(s)	59, 787, 987
GsuI	CTGGAG	2 cut(s)	301, 974
HaeII	RGCGCY	1 cut(s)	61
HaeIII	GGCC	7 cut(s)	309, 452, 560, 581, 757, 820, 1102
HgaI	GACGC	4 cut(s)	164, 319, 654, 808
HhaI	GCGC	3 cut(s)	60, 788, 988
Hin1I	GRCGYC	2 cut(s)	639, 800
Hin1II	CATG	1 cut(s)	781
Hin6I	GCGC	3 cut(s)	58, 786, 986
HinP1I	GCGC	3 cut(s)	58, 786, 986
HincII	GTYRAC	1 cut(s)	875
HindII	GTYRAC	1 cut(s)	875
HinfI	GANTC	5 cut(s)	218, 295, 383, 622, 1084
HphI	GGTGA	3 cut(s)	773, 995, 1019
Hpy166II	GTNNAC	1 cut(s)	875
Hpy188I	TCNGA	5 cut(s)	206, 274, 637, 831, 1044
Hpy188III	TCNNGA	5 cut(s)	11, 426, 460, 619, 626
Hpy8I	GTNNAC	1 cut(s)	875
Hpy99I	CGWCG	9 cut(s)	152, 155, 158, 173, 308, 344, 641, 644, 913
HpyAV	CCTTC	7 cut(s)	76, 322, 466, 693, 721, 734, 964
HpyCH4III	ACNGT	4 cut(s)	173, 706, 840, 944
HpyCH4IV	ACGT	6 cut(s)	198, 234, 639, 911, 1059, 1095
HpyCH4V	TGCA	7 cut(s)	249, 406, 415, 591, 777, 781, 843
HpyF3I	CTNAG	1 cut(s)	351
HpySE526I	ACGT	6 cut(s)	198, 234, 639, 911, 1059, 1095
Hsp92I	GRCGYC	2 cut(s)	639, 800
Hsp92II	CATG	1 cut(s)	781
HspAI	GCGC	3 cut(s)	58, 786, 986
KflI	GGGWCCC	1 cut(s)	288
Kpn2I	TCCGGA	3 cut(s)	10, 425, 625
KspI	CCGCGG	1 cut(s)	900
Kzo9I	GATC	1 cut(s)	1119
LmnI	GCTCC	2 cut(s)	13, 628
Lsp1109I	GCAGC	6 cut(s)	172, 233, 399, 427, 674, 1000
LweI	GCATC	1 cut(s)	1030
MabI	ACCWGGT	1 cut(s)	1005
MaeI	CTAG	2 cut(s)	878, 1123
MaeII	ACGT	6 cut(s)	198, 234, 639, 911, 1059, 1095
MaeIII	GTNAC	3 cut(s)	77, 320, 761
MalI	GATC	1 cut(s)	1121
MboI	GATC	1 cut(s)	1119
MboII	GAAGA	6 cut(s)	213, 709, 712, 733, 736, 844
MhlI	GDGCHC	5 cut(s)	272, 357, 759, 908, 1104
MluCI	AATT	5 cut(s)	41, 250, 280, 370, 470
MluI	ACGCGT	1 cut(s)	846
MlyI	GAGTC	3 cut(s)	212, 392, 616
MmeI	TCCRAC	5 cut(s)	168, 499, 660, 957, 1089
Mph1103I	ATGCAT	1 cut(s)	783
MroI	TCCGGA	3 cut(s)	10, 425, 625
MroXI	GAANNNNTTC	1 cut(s)	29
MseI	TTAA	1 cut(s)	231
MspA1I	CMGCKG	5 cut(s)	246, 418, 653, 899, 1117
MspR9I	CCNGG	8 cut(s)	292, 449, 536, 577, 578, 737, 759, 1007
MvaI	CCWGG	3 cut(s)	449, 737, 1007
MvnI	CGCG	2 cut(s)	848, 899
NciI	CCSGG	5 cut(s)	292, 536, 577, 578, 759
NdeII	GATC	1 cut(s)	1119
NlaIII	CATG	1 cut(s)	781
NmuCI	GTSAC	2 cut(s)	320, 761
NsbI	TGCGCA	1 cut(s)	787
NsiI	ATGCAT	1 cut(s)	783
NspI	RCATGY	1 cut(s)	781
PaeI	GCATGC	1 cut(s)	781
PcsI	WCGNNNNNNNCGW	1 cut(s)	1101
PdmI	GAANNNNTTC	1 cut(s)	29
PfeI	GAWTC	2 cut(s)	295, 1084
PflFI	GACNNNGTC	2 cut(s)	158, 197
PflMI	CCANNNNNTGG	1 cut(s)	118
PfoI	TCCNGGA	1 cut(s)	290
PleI	GAGTC	3 cut(s)	212, 391, 616
PmaCI	CACGTG	1 cut(s)	1096
PmlI	CACGTG	1 cut(s)	1096
PpsI	GAGTC	3 cut(s)	212, 391, 616
Ppu21I	YACGTR	1 cut(s)	1096
PpuMI	RGGWCCY	3 cut(s)	127, 288, 400
Psp124BI	GAGCTC	1 cut(s)	357
Psp5II	RGGWCCY	3 cut(s)	127, 288, 400
Psp6I	CCWGG	3 cut(s)	447, 735, 1005
PspCI	CACGTG	1 cut(s)	1096
PspGI	CCWGG	3 cut(s)	447, 735, 1005
PspOMI	GGGCCC	2 cut(s)	755, 1100
PspPPI	RGGWCCY	3 cut(s)	127, 288, 400
PstI	CTGCAG	2 cut(s)	408, 417
PstNI	CAGNNNCTG	1 cut(s)	412
PsyI	GACNNNGTC	2 cut(s)	158, 197
PvuII	CAGCTG	3 cut(s)	246, 418, 1117
RsaI	GTAC	2 cut(s)	17, 890
RsaNI	GTAC	2 cut(s)	16, 889
SacI	GAGCTC	1 cut(s)	357
SacII	CCGCGG	1 cut(s)	900
SalI	GTCGAC	1 cut(s)	873
SaqAI	TTAA	1 cut(s)	231
Sau3AI	GATC	1 cut(s)	1119
ScaI	AGTACT	1 cut(s)	17
SchI	GAGTC	3 cut(s)	212, 392, 616
ScrFI	CCNGG	8 cut(s)	292, 449, 536, 577, 578, 737, 759, 1007
SduI	GDGCHC	5 cut(s)	272, 357, 759, 908, 1104
SexAI	ACCWGGT	1 cut(s)	1005
SfaNI	GCATC	1 cut(s)	1030
SfcI	CTRYAG	2 cut(s)	404, 413
Sfr303I	CCGCGG	1 cut(s)	900
SgrBI	CCGCGG	1 cut(s)	900
SinI	GGWCC	9 cut(s)	109, 127, 288, 400, 481, 547, 573, 597, 827
SmaI	CCCGGG	1 cut(s)	578
SpeI	ACTAGT	1 cut(s)	877
SphI	GCATGC	1 cut(s)	781
Sse9I	AATT	5 cut(s)	41, 250, 280, 370, 470
SspMI	CTAG	2 cut(s)	878, 1123
SstI	GAGCTC	1 cut(s)	357
StyD4I	CCNGG	8 cut(s)	290, 447, 534, 575, 576, 735, 757, 1005
StyI	CCWWGG	1 cut(s)	555
TaaI	ACNGT	4 cut(s)	173, 706, 840, 944
TaiI	ACGT	6 cut(s)	201, 237, 642, 914, 1062, 1098
TaqI	TCGA	9 cut(s)	69, 135, 240, 357, 368, 459, 620, 859, 874
TaqII	GACCGA	1 cut(s)	535
TasI	AATT	5 cut(s)	41, 250, 280, 370, 470
TatI	WGTACW	1 cut(s)	15
TfiI	GAWTC	2 cut(s)	295, 1084
Tru1I	TTAA	1 cut(s)	231
Tru9I	TTAA	1 cut(s)	231
TscAI	CASTG	4 cut(s)	325, 697, 812, 843
TseFI	GTSAC	2 cut(s)	320, 761
TseI	GCWGC	7 cut(s)	185, 246, 412, 415, 662, 988, 1114
Tsp45I	GTSAC	2 cut(s)	320, 761
TspDTI	ATGAA	3 cut(s)	446, 988, 1076
TspGWI	ACGGA	1 cut(s)	806
TspMI	CCCGGG	1 cut(s)	576
TspRI	CASTG	4 cut(s)	325, 697, 812, 843
Tth111I	GACNNNGTC	2 cut(s)	158, 197
Van91I	CCANNNNNTGG	1 cut(s)	118
VpaK11BI	GGWCC	9 cut(s)	109, 127, 288, 400, 481, 547, 573, 597, 827
XapI	RAATTY	1 cut(s)	370
XceI	RCATGY	1 cut(s)	781
XmaI	CCCGGG	1 cut(s)	576
XmiI	GTMKAC	1 cut(s)	874
XmnI	GAANNNNTTC	1 cut(s)	29
XspI	CTAG	2 cut(s)	878, 1123
ZraI	GACGTC	1 cut(s)	640
ZrmI	AGTACT	1 cut(s)	17
Zsp2I	ATGCAT	1 cut(s)	783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.