Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0004079

Physical Location & Seq

Genomic Coordinates Reverse (-)

63139311 .. 63140999

Gene Structure 1689 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG462400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGGAGGCACCCGAATATTTTCAGAACAGCTTCTGCCCACAATTCGTAACCGAAAAGCAGCGACACTCTTTCGACAACACCAAGGCCAACAATGGCGCCGGTGCAGGCGACGGTTTCATGGTGGAGGACCTTCTTGACTTTTCTAACGACGACGCTGTCATTACCGACGCTGCTGCTGCTGCTGCTGCTGCTTTTGATAACGTCACCGGAAACTCCACAGACTCCTCCACCCTCACCGTCATCGACAGCAGCTGCAATTCTTCCTCGTTATCCGGCTGCGAACCGGCCAATTTCCCCGCCGATTTCGGAAGCCGGAATTTCAACGAAGTCCCCTTCTCCAGTGACCTCTGCGTTCCGTACGACGATTTAGCTGAGCTCGAATGGCAGCTCTCGAGTTTCTCGGAGGAGTCGTTTTCCAGCGAGGACCTCCAGAAGCTGCAGCTCATATCCGGAATGAAAGCCCGACCCGACGAGGCCGCCTCCGAGACCCGCCACTTCCAACCTGACCCAAACAACCACATCATCAGCAACCACAATAATAACAACCCGATATTCAACTCGGACATTTCGGTACCCGCCAAGGCGCGGAGTAAACGGTCCCGGGCAGCCCCGTGCAACTGGACTTCCCGTCTCCTCCTTCTCACGCCTAAAGAATCCTCTCCGGAGTCGTCCGACGTCGTCATTTCGGAACCGCCGTCGCTGCCTCCGGTGGAGTCTAGTGTCGGCAAGAAGACACTAAAGGCCGCGCCAAAGAAGAAGGAGAATCCAGAAGGCGGCGCCGCCGTGCCCGGGGACGGCCGGAAGTGTCTGCATTGCTCAACGGATAAGACTCCGCAGTGGCGGACCGGGCCCATGGGCCCGAAGACACTTTGCAACGCCTGCGGAGTCAGGTATAAGTCGGGCCGGCTCGTGCCTGAGTACAGGCCCGCGGCCAGCCCAACTTTTGTGCTAACGAAGCACTCCAACTCGCACCGTAAGGTGCTGGAGCTGCGGCGGCAGAAAGAGATGGTGAGAGCTCAGCACCAGTACATTCATCACCAGCCACCGCCGCACCACCATCACCACCACCACCACCATAATCCCAACATGATTTTCGACGTTAATGGCGGTGATTACTTAATTCACCAACACGTGGGGCCCGATTTCAGGCAGCTGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905177 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GATA

Protein Analysis

386

Amino Acids

42.54

Weight (kDa)

6.22

Isoelectric Point (pI)

50.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATA	PF00320	269 - 303	6.6e-15	GATA zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32890 AT5G25830
fragaria_vesca	FvH4_2g35450 FvH4_6g32190
malus_domestica	MD08G1113200.v1.1 MD09G1205600.v1.1 MD15G1092500.v1.1 MD17G1185900.v1.1
prunus_persica	Prupe.1G447300_v2.0.a1 Prupe.1G447400_v2.0.a1 Prupe.3G060900_v2.0.a1
pyrus_communis	pycom08g09390 pycom17g19520
rosa_chinensis	RchiOBHm_Chr2g0140091
rosa_laevigata	RLG00000010798 RLG00000019848
rosa_multiflora	Rmu_co8403039.1_g000001 Rmu_sc0002971.1_g000022 Rmu_sc0003244.1_g000030
rosa_roxburghii	Rroxscaffold_2G00105070 Rroxscaffold_7G00161780
rosa_rugosa	Rorug02G0361000.1 Rorug06G0349300
rosa_samantha	Rh2AG411700 Rh2BG422000 Rh2CG397800 Rh2DG431400 Rh6AG461600 Rh6BG439500 Rh6CG475600 Rh6DG462400
rosa_wichuraiana	Rw2G033730 Rw6G040230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	155
AatII	GACGTC	1 cut(s)	678
Acc65I	GGTACC	1 cut(s)	571
AccB1I	GGYRCC	4 cut(s)	7, 95, 571, 776
AccB7I	CCANNNNNTGG	1 cut(s)	1132
AccII	CGCG	3 cut(s)	586, 746, 929
AccIII	TCCGGA	2 cut(s)	449, 661
AcoI	YGGCCR	3 cut(s)	285, 796, 930
AcsI	RAATTY	1 cut(s)	316
AcvI	CACGTG	1 cut(s)	1132
AcyI	GRCGYC	3 cut(s)	96, 675, 777
AfaI	GTAC	4 cut(s)	359, 573, 920, 1028
AfiI	CCNNNNNNNGG	6 cut(s)	585, 773, 789, 794, 1132, 1146
AflIII	ACRYGT	1 cut(s)	1129
AgsI	TTSAA	2 cut(s)	322, 556
AhdI	GACNNNNNGTC	1 cut(s)	627
AjuI	GAANNNNNNNTTGG	2 cut(s)	1076, 1108
Alw21I	GWGCWC	2 cut(s)	378, 1018
Alw26I	GTCTC	2 cut(s)	479, 635
AlwNI	CAGNNNCTG	3 cut(s)	33, 252, 436
Ama87I	CYCGRG	3 cut(s)	391, 600, 788
Aor13HI	TCCGGA	2 cut(s)	449, 661
ApaI	GGGCCC	3 cut(s)	852, 860, 1140
ApoI	RAATTY	1 cut(s)	316
Asp700I	GAANNNNTTC	2 cut(s)	18, 29
Asp718I	GGTACC	1 cut(s)	571
AspLEI	GCGC	4 cut(s)	98, 586, 748, 779
AsuC2I	CCSGG	5 cut(s)	601, 602, 789, 790, 847
AsuHPI	GGTGA	7 cut(s)	196, 226, 1021, 1028, 1052, 1115, 1121
AvaI	CYCGRG	3 cut(s)	391, 600, 788
AvaII	GGWCC	4 cut(s)	127, 424, 597, 843
BaeGI	GKGCMC	4 cut(s)	789, 852, 860, 1140
BanI	GGYRCC	4 cut(s)	7, 95, 571, 776
BanII	GRGCYC	5 cut(s)	378, 852, 860, 1018, 1140
BauI	CACGAG	1 cut(s)	908
BbrPI	CACGTG	1 cut(s)	1132
BbsI	GAAGAC	2 cut(s)	737, 869
Bbv12I	GWGCWC	2 cut(s)	378, 1018
BccI	CCATC	2 cut(s)	1000, 1065
BceAI	ACGGC	3 cut(s)	679, 767, 811
BcgI	CGANNNNNNTGC	2 cut(s)	155, 189
BcnI	CCSGG	5 cut(s)	601, 602, 789, 790, 847
BcoDI	GTCTC	2 cut(s)	479, 635
BfaI	CTAG	2 cut(s)	717, 1159
BfmI	CTRYAG	1 cut(s)	437
BfoI	RGCGCY	2 cut(s)	99, 780
BlpI	GCTNAGC	2 cut(s)	372, 1017
Bme1390I	CCNGG	5 cut(s)	601, 602, 789, 790, 847
Bme18I	GGWCC	4 cut(s)	127, 424, 597, 843
BmeRI	GACNNNNNGTC	1 cut(s)	627
BmeT110I	CYCGRG	3 cut(s)	391, 600, 788
BmrFI	CCNGG	5 cut(s)	601, 602, 789, 790, 847
BpiI	GAAGAC	2 cut(s)	737, 869
BplI	GAGNNNNNCTC	2 cut(s)	464, 496
BpmI	CTGGAG	3 cut(s)	322, 413, 1004
Bpu1102I	GCTNAGC	2 cut(s)	372, 1017
BpuMI	CCSGG	5 cut(s)	601, 602, 789, 790, 847
BsaAI	YACGTR	1 cut(s)	1132
BsaHI	GRCGYC	3 cut(s)	96, 675, 777
BsaI	GGTCTC	1 cut(s)	479
BsaJI	CCNNGG	7 cut(s)	81, 579, 600, 788, 789, 852, 927
BsaWI	WCCGGW	4 cut(s)	206, 449, 661, 706
BsaXI	ACNNNNNCTCC	2 cut(s)	395, 425
Bsc4I	CCNNNNNNNGG	6 cut(s)	585, 773, 789, 794, 1132, 1146
Bse118I	RCCGGY	3 cut(s)	98, 283, 903
Bse1I	ACTGG	3 cut(s)	339, 623, 1024
Bse3DI	GCAATG	1 cut(s)	811
BseAI	TCCGGA	2 cut(s)	449, 661
BseDI	CCNNGG	7 cut(s)	81, 579, 600, 788, 789, 852, 927
BseLI	CCNNNNNNNGG	6 cut(s)	585, 773, 789, 794, 1132, 1146
BseMI	GCAATG	1 cut(s)	811
BseMII	CTCAG	3 cut(s)	363, 906, 1031
BseNI	ACTGG	3 cut(s)	339, 623, 1024
BseRI	GAGGAG	3 cut(s)	214, 419, 623
BseSI	GKGCMC	4 cut(s)	789, 852, 860, 1140
BseX3I	CGGCCG	1 cut(s)	796
BsgI	GTGCAG	1 cut(s)	123
Bsh1236I	CGCG	3 cut(s)	586, 746, 929
Bsh1285I	CGRYCG	1 cut(s)	799
BshNI	GGYRCC	4 cut(s)	7, 95, 571, 776
BsiEI	CGRYCG	1 cut(s)	799
BsiHKAI	GWGCWC	2 cut(s)	378, 1018
BsiHKCI	CYCGRG	3 cut(s)	391, 600, 788
BsiWI	CGTACG	1 cut(s)	357
BslFI	GGGAC	3 cut(s)	314, 583, 806
BslI	CCNNNNNNNGG	6 cut(s)	585, 773, 789, 794, 1132, 1146
BsmAI	GTCTC	2 cut(s)	479, 635
BsmBI	CGTCTC	1 cut(s)	635
BsmFI	GGGAC	3 cut(s)	314, 583, 806
Bso31I	GGTCTC	1 cut(s)	479
BsoBI	CYCGRG	3 cut(s)	391, 600, 788
Bsp120I	GGGCCC	3 cut(s)	848, 856, 1136
Bsp1286I	GDGCHC	6 cut(s)	378, 789, 852, 860, 1018, 1140
Bsp13I	TCCGGA	2 cut(s)	449, 661
Bsp143I	GATC	1 cut(s)	1155
Bsp1720I	GCTNAGC	2 cut(s)	372, 1017
Bsp19I	CCATGG	1 cut(s)	852
BspCNI	CTCAG	3 cut(s)	364, 907, 1030
BspEI	TCCGGA	2 cut(s)	449, 661
BspFNI	CGCG	3 cut(s)	586, 746, 929
BspMAI	CTGCAG	1 cut(s)	441
BspT107I	GGYRCC	4 cut(s)	7, 95, 571, 776
BspTNI	GGTCTC	1 cut(s)	479
BsrDI	GCAATG	1 cut(s)	811
BsrFI	RCCGGY	3 cut(s)	98, 283, 903
BsrI	ACTGG	3 cut(s)	339, 623, 1024
BssAI	RCCGGY	3 cut(s)	98, 283, 903
BssECI	CCNNGG	7 cut(s)	81, 579, 600, 788, 789, 852, 927
BssMI	GATC	1 cut(s)	1155
BssNI	GRCGYC	3 cut(s)	96, 675, 777
BssSI	CACGAG	1 cut(s)	908
BssT1I	CCWWGG	3 cut(s)	81, 579, 852
Bst2BI	CACGAG	1 cut(s)	908
Bst4CI	ACNGT	4 cut(s)	113, 238, 597, 974
BstACI	GRCGYC	3 cut(s)	96, 675, 777
BstAPI	GCANNNNNTGC	1 cut(s)	879
BstBAI	YACGTR	1 cut(s)	1132
BstC8I	GCNNGC	5 cut(s)	106, 880, 905, 927, 934
BstDEI	CTNAG	3 cut(s)	372, 915, 1017
BstDSI	CCRYGG	2 cut(s)	852, 927
BstFNI	CGCG	3 cut(s)	586, 746, 929
BstH2I	RGCGCY	2 cut(s)	99, 780
BstHHI	GCGC	4 cut(s)	98, 586, 748, 779
BstKTI	GATC	1 cut(s)	1158
BstMAI	GTCTC	2 cut(s)	479, 635
BstMBI	GATC	1 cut(s)	1155
BstMCI	CGRYCG	1 cut(s)	799
BstSCI	CCNGG	5 cut(s)	599, 600, 787, 788, 845
BstSFI	CTRYAG	1 cut(s)	437
BstSLI	GKGCMC	4 cut(s)	789, 852, 860, 1140
BstUI	CGCG	3 cut(s)	586, 746, 929
BstV2I	GAAGAC	2 cut(s)	737, 869
BstZI	CGGCCG	1 cut(s)	796
BtgI	CCRYGG	2 cut(s)	852, 927
BtsI	GCAGTG	1 cut(s)	842
BtsIMutI	CAGTG	2 cut(s)	346, 842
Cac8I	GCNNGC	5 cut(s)	106, 880, 905, 927, 934
CaiI	CAGNNNCTG	3 cut(s)	33, 252, 436
CfoI	GCGC	4 cut(s)	98, 586, 748, 779
Cfr10I	RCCGGY	3 cut(s)	98, 283, 903
Cfr42I	CCGCGG	1 cut(s)	930
Cfr9I	CCCGGG	2 cut(s)	600, 788
CpoI	CGGWCCG	1 cut(s)	843
CseI	GACGC	2 cut(s)	161, 176
Csp6I	GTAC	4 cut(s)	358, 572, 919, 1027
CspI	CGGWCCG	1 cut(s)	843
CviAII	CATG	3 cut(s)	118, 853, 1087
CviQI	GTAC	4 cut(s)	358, 572, 919, 1027
DdeI	CTNAG	3 cut(s)	372, 915, 1017
DinI	GGCGCC	2 cut(s)	97, 778
DpnI	GATC	1 cut(s)	1157
DpnII	GATC	1 cut(s)	1155
DrdI	GACNNNNNNGTC	1 cut(s)	155
DriI	GACNNNNNGTC	1 cut(s)	627
DseDI	GACNNNNNNGTC	1 cut(s)	155
EaeI	YGGCCR	3 cut(s)	285, 796, 930
EagI	CGGCCG	1 cut(s)	796
Eam1105I	GACNNNNNGTC	1 cut(s)	627
EciI	GGCGGA	1 cut(s)	856
Ecl136II	GAGCTC	2 cut(s)	376, 1016
EclXI	CGGCCG	1 cut(s)	796
Eco130I	CCWWGG	3 cut(s)	81, 579, 852
Eco24I	GRGCYC	5 cut(s)	378, 852, 860, 1018, 1140
Eco31I	GGTCTC	1 cut(s)	479
Eco47I	GGWCC	4 cut(s)	127, 424, 597, 843
Eco52I	CGGCCG	1 cut(s)	796
Eco53kI	GAGCTC	2 cut(s)	376, 1016
Eco72I	CACGTG	1 cut(s)	1132
Eco88I	CYCGRG	3 cut(s)	391, 600, 788
EcoICRI	GAGCTC	2 cut(s)	376, 1016
EcoO109I	RGGNCCY	3 cut(s)	127, 424, 1136
EcoT14I	CCWWGG	3 cut(s)	81, 579, 852
EcoT38I	GRGCYC	5 cut(s)	378, 852, 860, 1018, 1140
EgeI	GGCGCC	2 cut(s)	97, 778
EheI	GGCGCC	2 cut(s)	97, 778
ErhI	CCWWGG	3 cut(s)	81, 579, 852
Esp3I	CGTCTC	1 cut(s)	635
FaeI	CATG	3 cut(s)	121, 856, 1090
FaiI	YATR	6 cut(s)	119, 446, 854, 894, 1077, 1088
FaqI	GGGAC	3 cut(s)	314, 583, 806
FatI	CATG	3 cut(s)	117, 852, 1086
FauI	CCCGC	4 cut(s)	304, 497, 583, 934
FriOI	GRGCYC	5 cut(s)	378, 852, 860, 1018, 1140
FspBI	CTAG	2 cut(s)	717, 1159
GlaI	GCGC	4 cut(s)	97, 585, 747, 778
GsuI	CTGGAG	3 cut(s)	322, 413, 1004
HaeII	RGCGCY	2 cut(s)	99, 780
HgaI	GACGC	2 cut(s)	161, 176
HhaI	GCGC	4 cut(s)	98, 586, 748, 779
Hin1I	GRCGYC	3 cut(s)	96, 675, 777
Hin1II	CATG	3 cut(s)	121, 856, 1090
Hin6I	GCGC	4 cut(s)	96, 584, 746, 777
HinP1I	GCGC	4 cut(s)	96, 584, 746, 777
HinfI	GANTC	8 cut(s)	221, 407, 653, 665, 713, 763, 829, 885
HphI	GGTGA	7 cut(s)	196, 226, 1021, 1028, 1052, 1115, 1121
Hpy166II	GTNNAC	1 cut(s)	593
Hpy188I	TCNGA	7 cut(s)	24, 308, 403, 484, 562, 673, 688
Hpy188III	TCNNGA	6 cut(s)	134, 391, 430, 450, 662, 767
Hpy8I	GTNNAC	1 cut(s)	593
HpyAV	CCTTC	5 cut(s)	140, 343, 647, 751, 764
HpyCH4III	ACNGT	4 cut(s)	113, 238, 597, 974
HpyCH4IV	ACGT	4 cut(s)	201, 675, 1098, 1131
HpyCH4V	TGCA	6 cut(s)	104, 255, 439, 615, 811, 873
HpyF3I	CTNAG	3 cut(s)	372, 915, 1017
HpySE526I	ACGT	4 cut(s)	201, 675, 1098, 1131
Hsp92I	GRCGYC	3 cut(s)	96, 675, 777
Hsp92II	CATG	3 cut(s)	121, 856, 1090
HspAI	GCGC	4 cut(s)	96, 584, 746, 777
KasI	GGCGCC	2 cut(s)	95, 776
Kpn2I	TCCGGA	2 cut(s)	449, 661
KpnI	GGTACC	1 cut(s)	575
KroI	GCCGGC	1 cut(s)	903
KroNI	GCCGGC	1 cut(s)	905
KspI	CCGCGG	1 cut(s)	930
Kzo9I	GATC	1 cut(s)	1155
LmnI	GCTCC	1 cut(s)	985
MaeI	CTAG	2 cut(s)	717, 1159
MaeII	ACGT	4 cut(s)	201, 675, 1098, 1131
MaeIII	GTNAC	3 cut(s)	46, 202, 341
MalI	GATC	1 cut(s)	1157
MboI	GATC	1 cut(s)	1155
MboII	GAAGA	4 cut(s)	252, 742, 766, 874
MhlI	GDGCHC	6 cut(s)	378, 789, 852, 860, 1018, 1140
MluCI	AATT	5 cut(s)	41, 256, 289, 316, 1119
Mly113I	GGCGCC	2 cut(s)	96, 777
MlyI	GAGTC	6 cut(s)	215, 416, 674, 722, 823, 894
MmeI	TCCRAC	3 cut(s)	523, 696, 987
MroI	TCCGGA	2 cut(s)	449, 661
MroNI	GCCGGC	1 cut(s)	903
MroXI	GAANNNNTTC	2 cut(s)	18, 29
MseI	TTAA	2 cut(s)	1101, 1118
MspA1I	CMGCKG	3 cut(s)	252, 929, 1153
MspR9I	CCNGG	5 cut(s)	601, 602, 789, 790, 847
MvnI	CGCG	3 cut(s)	586, 746, 929
NaeI	GCCGGC	1 cut(s)	905
NarI	GGCGCC	2 cut(s)	96, 777
NciI	CCSGG	5 cut(s)	601, 602, 789, 790, 847
NcoI	CCATGG	1 cut(s)	852
NdeII	GATC	1 cut(s)	1155
NgoMIV	GCCGGC	1 cut(s)	903
NlaIII	CATG	3 cut(s)	121, 856, 1090
NmuCI	GTSAC	2 cut(s)	202, 341
PaeR7I	CTCGAG	1 cut(s)	391
PcsI	WCGNNNNNNNCGW	3 cut(s)	407, 692, 1137
PdiI	GCCGGC	1 cut(s)	905
PdmI	GAANNNNTTC	2 cut(s)	18, 29
PfeI	GAWTC	2 cut(s)	653, 763
Pfl23II	CGTACG	1 cut(s)	357
PflFI	GACNNNGTC	2 cut(s)	155, 677
PflMI	CCANNNNNTGG	1 cut(s)	1132
PleI	GAGTC	6 cut(s)	215, 415, 673, 721, 823, 893
PluTI	GGCGCC	2 cut(s)	99, 780
PmaCI	CACGTG	1 cut(s)	1132
PmlI	CACGTG	1 cut(s)	1132
PpsI	GAGTC	6 cut(s)	215, 415, 673, 721, 823, 893
Ppu21I	YACGTR	1 cut(s)	1132
PpuMI	RGGWCCY	2 cut(s)	127, 424
Psp124BI	GAGCTC	2 cut(s)	378, 1018
Psp5II	RGGWCCY	2 cut(s)	127, 424
PspCI	CACGTG	1 cut(s)	1132
PspLI	CGTACG	1 cut(s)	357
PspOMI	GGGCCC	3 cut(s)	848, 856, 1136
PspPPI	RGGWCCY	2 cut(s)	127, 424
PstI	CTGCAG	1 cut(s)	441
PstNI	CAGNNNCTG	3 cut(s)	33, 252, 436
PsyI	GACNNNGTC	2 cut(s)	155, 677
PvuII	CAGCTG	2 cut(s)	252, 1153
RsaI	GTAC	4 cut(s)	359, 573, 920, 1028
RsaNI	GTAC	4 cut(s)	358, 572, 919, 1027
Rsr2I	CGGWCCG	1 cut(s)	843
RsrII	CGGWCCG	1 cut(s)	843
SacI	GAGCTC	2 cut(s)	378, 1018
SacII	CCGCGG	1 cut(s)	930
SaqAI	TTAA	2 cut(s)	1101, 1118
Sau3AI	GATC	1 cut(s)	1155
SchI	GAGTC	6 cut(s)	215, 416, 674, 722, 823, 894
ScrFI	CCNGG	5 cut(s)	601, 602, 789, 790, 847
SduI	GDGCHC	6 cut(s)	378, 789, 852, 860, 1018, 1140
SfcI	CTRYAG	1 cut(s)	437
SfoI	GGCGCC	2 cut(s)	97, 778
Sfr274I	CTCGAG	1 cut(s)	391
Sfr303I	CCGCGG	1 cut(s)	930
SgrAI	CRCCGGYG	1 cut(s)	98
SgrBI	CCGCGG	1 cut(s)	930
SinI	GGWCC	4 cut(s)	127, 424, 597, 843
SlaI	CTCGAG	1 cut(s)	391
SmaI	CCCGGG	2 cut(s)	602, 790
SmlI	CTYRAG	1 cut(s)	391
SmoI	CTYRAG	1 cut(s)	391
Sse9I	AATT	5 cut(s)	41, 256, 289, 316, 1119
SspDI	GGCGCC	2 cut(s)	95, 776
SspI	AATATT	1 cut(s)	17
SspMI	CTAG	2 cut(s)	717, 1159
SstI	GAGCTC	2 cut(s)	378, 1018
StyD4I	CCNGG	5 cut(s)	599, 600, 787, 788, 845
StyI	CCWWGG	3 cut(s)	81, 579, 852
TaaI	ACNGT	4 cut(s)	113, 238, 597, 974
TaiI	ACGT	4 cut(s)	204, 678, 1101, 1134
TaqI	TCGA	5 cut(s)	72, 243, 378, 392, 1095
TasI	AATT	5 cut(s)	41, 256, 289, 316, 1119
TatI	WGTACW	2 cut(s)	918, 1026
TauI	GCSGC	8 cut(s)	479, 746, 777, 782, 932, 994, 997, 1051
TfiI	GAWTC	2 cut(s)	653, 763
Tru1I	TTAA	2 cut(s)	1101, 1118
Tru9I	TTAA	2 cut(s)	1101, 1118
TscAI	CASTG	2 cut(s)	346, 842
TseFI	GTSAC	2 cut(s)	202, 341
Tsp45I	GTSAC	2 cut(s)	202, 341
TspDTI	ATGAA	3 cut(s)	106, 470, 1022
TspGWI	ACGGA	2 cut(s)	345, 836
TspMI	CCCGGG	2 cut(s)	600, 788
TspRI	CASTG	2 cut(s)	346, 842
Tth111I	GACNNNGTC	2 cut(s)	155, 677
Van91I	CCANNNNNTGG	1 cut(s)	1132
VpaK11BI	GGWCC	4 cut(s)	127, 424, 597, 843
XapI	RAATTY	1 cut(s)	316
XhoI	CTCGAG	1 cut(s)	391
XmaI	CCCGGG	2 cut(s)	600, 788
XmnI	GAANNNNTTC	2 cut(s)	18, 29
XspI	CTAG	2 cut(s)	717, 1159
ZraI	GACGTC	1 cut(s)	676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.