Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004079

Physical Location & Seq

Genomic Coordinates Reverse (-)

49917107 .. 49920107

Gene Structure 3001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0349300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1314 bp

ATGAGCAATTCAACCATGGCGGTCAAACCGGCGCGGCGGGCGAAATCGTCGCAGCGGCACCAAATTTCCAAGCCCTGGATCCCCACGCTGTTCCAAAACCCTAAGGTAGCCTCCGCCTCCGCTTTGCTCGTCTTCGATGCGGTCCTCACCGCCCTCATCATTGCCTACGTCCCTTATACGAAGATCGATTGGGACGCTTACATGTCTCAGGTCAATGGGTTTCTTGGTGGAGAAAGAGACTATAGTAACTTGAAAGGAGACACAGGGCCACTGGTGTATCCTGCTGGTTTTTTATATGCTTATTCTGCTATTCAGTATGTTACAGGAAGCCAAGTTCATCCAGCTCAGATTTTGTTTGGGGTTCTGTACATTATAAACTTGGGAATCATGTTTTACATCTATGTGAAGACTGATGTGGTTCCATGGTGGGCTCTTGCGTTGCTTTGTCTATCAAAAAGAGTGCATTCTATTTTTGTGCTCCGACTTTTTAATGACTGTTTGGCCATGTTGCTACTGGATGCTTCATTAGCCTCATTTCTTCACCAAAGGTGGCATCTAGGATTGATCATTTTCAGTGGTGCTGTTTCGATAAAGATGAATGTGCTCCTCTATGCTCCACCTCTTCTACTCCTCATGTTAAAGGCTATGGATATCAGTGGAGTGATATCAGCTTTGTTTGGTGCAGCTCTTGTCCAGATACTGCTGGGGTTACCTTTCATCATGTCTCATCCATTTGCATACATCTCAAGAGCCTTTAATCTTGGCCGTGTATTCATCCACTTCTGGTCTGTTAATTTCAAGTTCCTTCCTGAGCCAATATTTGTCTCCAAGGCATTTGCAATCTCTTTGCTGGTTGTACACCTTGTTTTACTTGCAGCCTTTGCTCACTATAGATGGTGCAAGCATGAAGGAGGAGTTTTTAAATTTTTGTATTCGAAACTTGTTTCTATAAAACTCAAATTTGCTCTTACAAATACCCATTCCTACAAGGCTCTTAAGAAAGAACATATTCTGACAACTATGTTCGTTGGAAATTTCATCGGCATTCTATGTGCCCGATCACTACATTATCAATTCTACTCTTGGTATTTCCACACATTACCTTATTTATTGTGGAAAACACCTTTTCCTTCGTTTCTACGGGTAATATTGTTTACTGGGGTGGAGCTTTGCTGGAATGTGTATCCTTCTAACCTTTACTCATCAGCATTGCTTCTTGGTCTCCACTTAGTAATACTATTTGGTCTGTGGTCTGCCCCATCCGAATATCCTTACGTGGACAAGAAAGTATCGACTCAAGACAAACACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905177 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GATA

Protein Analysis

437

Amino Acids

49.54

Weight (kDa)

9.64

Isoelectric Point (pI)

36.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALG3	PF05208	41 - 402	2.3e-137	ALG3 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32890 AT5G25830
fragaria_vesca	FvH4_2g35450 FvH4_6g32190
malus_domestica	MD08G1113200.v1.1 MD09G1205600.v1.1 MD15G1092500.v1.1 MD17G1185900.v1.1
prunus_persica	Prupe.1G447300_v2.0.a1 Prupe.1G447400_v2.0.a1 Prupe.3G060900_v2.0.a1
pyrus_communis	pycom08g09390 pycom17g19520
rosa_chinensis	RchiOBHm_Chr2g0140091
rosa_laevigata	RLG00000010798 RLG00000019848
rosa_multiflora	Rmu_co8403039.1_g000001 Rmu_sc0002971.1_g000022 Rmu_sc0003244.1_g000030
rosa_roxburghii	Rroxscaffold_2G00105070 Rroxscaffold_7G00161780
rosa_rugosa	Rorug02G0361000.1 Rorug06G0349300
rosa_samantha	Rh2AG411700 Rh2BG422000 Rh2CG397800 Rh2DG431400 Rh6AG461600 Rh6BG439500 Rh6CG475600 Rh6DG462400
rosa_wichuraiana	Rw2G033730 Rw6G040230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	374
AccB1I	GGYRCC	1 cut(s)	57
AccB7I	CCANNNNNTGG	1 cut(s)	75
AccII	CGCG	1 cut(s)	34
AciI	CCGC	8 cut(s)	20, 34, 37, 55, 114, 120, 140, 150
AclWI	GGATC	2 cut(s)	73, 86
AcoI	YGGCCR	2 cut(s)	501, 763
AcsI	RAATTY	4 cut(s)	63, 923, 959, 1033
AfaI	GTAC	2 cut(s)	368, 858
AfiI	CCNNNNNNNGG	1 cut(s)	75
AflII	CTTAAG	1 cut(s)	995
AflIII	ACRYGT	1 cut(s)	201
AgsI	TTSAA	3 cut(s)	12, 253, 799
AjnI	CCWGG	1 cut(s)	74
AloI	GAACNNNNNNTCC	2 cut(s)	318, 350
AluBI	AGCT	4 cut(s)	344, 671, 686, 1168
AluI	AGCT	4 cut(s)	344, 671, 686, 1168
Alw21I	GWGCWC	2 cut(s)	480, 606
Alw26I	GTCTC	6 cut(s)	210, 231, 252, 729, 829, 1226
AlwI	GGATC	2 cut(s)	73, 86
AlwNI	CAGNNNCTG	1 cut(s)	700
AoxI	GGCC	3 cut(s)	266, 501, 763
ApeKI	GCWGC	3 cut(s)	52, 683, 875
ApoI	RAATTY	4 cut(s)	63, 923, 959, 1033
Asp700I	GAANNNNTTC	1 cut(s)	1008
AspLEI	GCGC	1 cut(s)	34
AspS9I	GGNCC	2 cut(s)	142, 266
AsuHPI	GGTGA	2 cut(s)	139, 533
AsuII	TTCGAA	1 cut(s)	935
AvaII	GGWCC	1 cut(s)	142
AxyI	CCTNAGG	1 cut(s)	102
BaeGI	GKGCMC	1 cut(s)	1057
BaeI	ACNNNNGTAYC	2 cut(s)	260, 293
BalI	TGGCCA	1 cut(s)	503
BamHI	GGATCC	1 cut(s)	78
BanI	GGYRCC	1 cut(s)	57
BanII	GRGCYC	1 cut(s)	433
BbsI	GAAGAC	2 cut(s)	124, 413
Bbv12I	GWGCWC	2 cut(s)	480, 606
BbvI	GCAGC	3 cut(s)	64, 695, 887
BccI	CCATC	2 cut(s)	888, 1267
BceAI	ACGGC	1 cut(s)	750
BciT130I	CCWGG	1 cut(s)	76
BciVI	GTATCC	2 cut(s)	288, 1194
BclI	TGATCA	1 cut(s)	564
BcoDI	GTCTC	6 cut(s)	210, 231, 252, 729, 829, 1226
BfaI	CTAG	1 cut(s)	557
BfmI	CTRYAG	2 cut(s)	241, 889
BfrI	CTTAAG	1 cut(s)	995
BfuI	GTATCC	2 cut(s)	288, 1194
BisI	GCNGC	5 cut(s)	35, 53, 56, 684, 876
BlsI	GCNGC	5 cut(s)	36, 54, 57, 685, 877
Bme1390I	CCNGG	1 cut(s)	76
Bme18I	GGWCC	1 cut(s)	142
BmgT120I	GGNCC	2 cut(s)	142, 266
BmiI	GGNNCC	3 cut(s)	59, 80, 420
BmrFI	CCNGG	1 cut(s)	76
BmrI	ACTGGG	1 cut(s)	1167
BmsI	GCATC	3 cut(s)	127, 508, 562
BmuI	ACTGGG	1 cut(s)	1167
BpiI	GAAGAC	2 cut(s)	124, 413
Bpu10I	CCTNAGC	1 cut(s)	810
Bpu14I	TTCGAA	1 cut(s)	935
BpuEI	CTTGAG	2 cut(s)	730, 1281
Bsa29I	ATCGAT	1 cut(s)	186
BsaAI	YACGTR	1 cut(s)	1276
BsaI	GGTCTC	1 cut(s)	1226
BsaJI	CCNNGG	4 cut(s)	15, 74, 422, 828
Bsc4I	CCNNNNNNNGG	1 cut(s)	75
Bse118I	RCCGGY	1 cut(s)	28
Bse1I	ACTGG	3 cut(s)	276, 519, 1162
Bse21I	CCTNAGG	1 cut(s)	102
Bse3DI	GCAATG	2 cut(s)	159, 1208
BseBI	CCWGG	1 cut(s)	76
BseCI	ATCGAT	1 cut(s)	186
BseDI	CCNNGG	4 cut(s)	15, 74, 422, 828
BseGI	GGATG	5 cut(s)	337, 523, 727, 774, 1259
BseLI	CCNNNNNNNGG	1 cut(s)	75
BseMI	GCAATG	2 cut(s)	159, 1208
BseMII	CTCAG	3 cut(s)	221, 359, 801
BseNI	ACTGG	3 cut(s)	276, 519, 1162
BseRI	GAGGAG	3 cut(s)	596, 620, 927
BseSI	GKGCMC	1 cut(s)	1057
BseXI	GCAGC	3 cut(s)	64, 695, 887
BseYI	CCCAGC	1 cut(s)	703
BsgI	GTGCAG	1 cut(s)	702
Bsh1236I	CGCG	1 cut(s)	34
BshFI	GGCC	3 cut(s)	268, 503, 765
BshNI	GGYRCC	1 cut(s)	57
BshVI	ATCGAT	1 cut(s)	186
BsiHKAI	GWGCWC	2 cut(s)	480, 606
BsiSI	CCGG	1 cut(s)	29
BslFI	GGGAC	2 cut(s)	155, 206
BslI	CCNNNNNNNGG	1 cut(s)	75
BsmAI	GTCTC	6 cut(s)	210, 231, 252, 729, 829, 1226
BsmFI	GGGAC	2 cut(s)	155, 206
BsmI	GAATGC	2 cut(s)	463, 1044
BsnI	GGCC	3 cut(s)	268, 503, 765
Bso31I	GGTCTC	1 cut(s)	1226
Bsp119I	TTCGAA	1 cut(s)	935
Bsp1286I	GDGCHC	4 cut(s)	433, 480, 606, 1057
Bsp1407I	TGTACA	2 cut(s)	366, 856
Bsp143I	GATC	4 cut(s)	78, 183, 564, 1058
Bsp19I	CCATGG	2 cut(s)	15, 422
BspACI	CCGC	8 cut(s)	20, 34, 37, 55, 114, 120, 140, 150
BspANI	GGCC	3 cut(s)	268, 503, 765
BspCNI	CTCAG	3 cut(s)	220, 358, 802
BspDI	ATCGAT	1 cut(s)	186
BspFNI	CGCG	1 cut(s)	34
BspLI	GGNNCC	3 cut(s)	59, 80, 420
BspPI	GGATC	2 cut(s)	73, 86
BspT104I	TTCGAA	1 cut(s)	935
BspT107I	GGYRCC	1 cut(s)	57
BspTI	CTTAAG	1 cut(s)	995
BspTNI	GGTCTC	1 cut(s)	1226
BsrDI	GCAATG	2 cut(s)	159, 1208
BsrFI	RCCGGY	1 cut(s)	28
BsrGI	TGTACA	2 cut(s)	366, 856
BsrI	ACTGG	3 cut(s)	276, 519, 1162
BssAI	RCCGGY	1 cut(s)	28
BssECI	CCNNGG	4 cut(s)	15, 74, 422, 828
BssMI	GATC	4 cut(s)	78, 183, 564, 1058
BssT1I	CCWWGG	3 cut(s)	15, 422, 828
Bst2UI	CCWGG	1 cut(s)	76
Bst4CI	ACNGT	1 cut(s)	497
Bst6I	CTCTTC	1 cut(s)	627
BstAFI	CTTAAG	1 cut(s)	995
BstAPI	GCANNNNNTGC	1 cut(s)	881
BstAUI	TGTACA	2 cut(s)	366, 856
BstBAI	YACGTR	1 cut(s)	1276
BstBI	TTCGAA	1 cut(s)	935
BstC8I	GCNNGC	2 cut(s)	39, 902
BstDEI	CTNAG	5 cut(s)	102, 207, 345, 810, 1228
BstDSI	CCRYGG	2 cut(s)	15, 422
BstEII	GGTNACC	1 cut(s)	708
BstF5I	GGATG	5 cut(s)	337, 523, 727, 774, 1259
BstFNI	CGCG	1 cut(s)	34
BstHHI	GCGC	1 cut(s)	34
BstKTI	GATC	4 cut(s)	81, 186, 567, 1061
BstMAI	GTCTC	6 cut(s)	210, 231, 252, 729, 829, 1226
BstMBI	GATC	4 cut(s)	78, 183, 564, 1058
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 305, 527, 881
BstNI	CCWGG	1 cut(s)	76
BstNSI	RCATGY	1 cut(s)	205
BstPI	GGTNACC	1 cut(s)	708
BstSCI	CCNGG	1 cut(s)	74
BstSFI	CTRYAG	2 cut(s)	241, 889
BstSLI	GKGCMC	1 cut(s)	1057
BstUI	CGCG	1 cut(s)	34
BstV1I	GCAGC	3 cut(s)	64, 695, 887
BstV2I	GAAGAC	2 cut(s)	124, 413
BstX2I	RGATCY	1 cut(s)	78
BstYI	RGATCY	1 cut(s)	78
Bsu15I	ATCGAT	1 cut(s)	186
Bsu36I	CCTNAGG	1 cut(s)	102
BsuI	GTATCC	2 cut(s)	288, 1194
BsuRI	GGCC	3 cut(s)	268, 503, 765
BsuTUI	ATCGAT	1 cut(s)	186
BtgI	CCRYGG	2 cut(s)	15, 422
BtsCI	GGATG	5 cut(s)	337, 523, 727, 774, 1259
BtsIMutI	CAGTG	3 cut(s)	269, 580, 661
Cac8I	GCNNGC	2 cut(s)	39, 902
CaiI	CAGNNNCTG	1 cut(s)	700
CfoI	GCGC	1 cut(s)	34
Cfr10I	RCCGGY	1 cut(s)	28
Cfr13I	GGNCC	2 cut(s)	142, 266
ClaI	ATCGAT	1 cut(s)	186
CseI	GACGC	1 cut(s)	203
Csp6I	GTAC	2 cut(s)	367, 857
CviAII	CATG	8 cut(s)	16, 202, 388, 423, 505, 634, 721, 905
CviQI	GTAC	2 cut(s)	367, 857
DdeI	CTNAG	5 cut(s)	102, 207, 345, 810, 1228
DpnI	GATC	4 cut(s)	80, 185, 566, 1060
DpnII	GATC	4 cut(s)	78, 183, 564, 1058
DraI	TTTAAA	1 cut(s)	922
EaeI	YGGCCR	2 cut(s)	501, 763
Eam1104I	CTCTTC	1 cut(s)	627
EarI	CTCTTC	1 cut(s)	627
EciI	GGCGGA	1 cut(s)	103
Eco130I	CCWWGG	3 cut(s)	15, 422, 828
Eco24I	GRGCYC	1 cut(s)	433
Eco31I	GGTCTC	1 cut(s)	1226
Eco32I	GATATC	2 cut(s)	652, 666
Eco47I	GGWCC	1 cut(s)	142
Eco81I	CCTNAGG	1 cut(s)	102
Eco91I	GGTNACC	1 cut(s)	708
EcoO65I	GGTNACC	1 cut(s)	708
EcoRII	CCWGG	1 cut(s)	74
EcoRV	GATATC	2 cut(s)	652, 666
EcoT14I	CCWWGG	3 cut(s)	15, 422, 828
EcoT38I	GRGCYC	1 cut(s)	433
ErhI	CCWWGG	3 cut(s)	15, 422, 828
FaeI	CATG	8 cut(s)	19, 205, 391, 426, 508, 637, 724, 908
FaqI	GGGAC	2 cut(s)	155, 206
FatI	CATG	8 cut(s)	15, 201, 387, 422, 504, 633, 720, 904
FauI	CCCGC	1 cut(s)	30
FbaI	TGATCA	1 cut(s)	564
Fnu4HI	GCNGC	5 cut(s)	35, 53, 56, 684, 876
FokI	GGATG	5 cut(s)	324, 530, 714, 761, 1246
FriOI	GRGCYC	1 cut(s)	433
Fsp4HI	GCNGC	5 cut(s)	35, 53, 56, 684, 876
FspBI	CTAG	1 cut(s)	557
GlaI	GCGC	1 cut(s)	33
GluI	GCNGC	5 cut(s)	35, 53, 56, 684, 876
GsaI	CCCAGC	1 cut(s)	707
HaeIII	GGCC	3 cut(s)	268, 503, 765
HapII	CCGG	1 cut(s)	29
HgaI	GACGC	1 cut(s)	203
HhaI	GCGC	1 cut(s)	34
Hin1II	CATG	8 cut(s)	19, 205, 391, 426, 508, 637, 724, 908
Hin6I	GCGC	1 cut(s)	32
HinP1I	GCGC	1 cut(s)	32
HinfI	GANTC	2 cut(s)	384, 1294
HpaII	CCGG	1 cut(s)	29
HphI	GGTGA	2 cut(s)	139, 533
Hpy166II	GTNNAC	3 cut(s)	859, 1155, 1279
Hpy188I	TCNGA	4 cut(s)	348, 482, 1014, 1264
Hpy188III	TCNNGA	4 cut(s)	694, 747, 809, 1298
Hpy8I	GTNNAC	3 cut(s)	859, 1155, 1279
Hpy99I	CGWCG	1 cut(s)	52
HpyAV	CCTTC	4 cut(s)	815, 902, 1140, 1197
HpyCH4III	ACNGT	1 cut(s)	497
HpyCH4IV	ACGT	2 cut(s)	168, 1275
HpyCH4V	TGCA	6 cut(s)	463, 683, 737, 839, 875, 900
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 305, 527, 881
HpyF3I	CTNAG	5 cut(s)	102, 207, 345, 810, 1228
HpySE526I	ACGT	2 cut(s)	168, 1275
Hsp92II	CATG	8 cut(s)	19, 205, 391, 426, 508, 637, 724, 908
HspAI	GCGC	1 cut(s)	32
Ksp22I	TGATCA	1 cut(s)	564
Kzo9I	GATC	4 cut(s)	78, 183, 564, 1058
LmnI	GCTCC	4 cut(s)	483, 609, 619, 1165
Lsp1109I	GCAGC	3 cut(s)	64, 695, 887
LweI	GCATC	3 cut(s)	127, 508, 562
MaeI	CTAG	1 cut(s)	557
MaeII	ACGT	2 cut(s)	168, 1275
MaeIII	GTNAC	3 cut(s)	245, 319, 708
MalI	GATC	4 cut(s)	80, 185, 566, 1060
MboI	GATC	4 cut(s)	78, 183, 564, 1058
MboII	GAAGA	5 cut(s)	124, 193, 418, 530, 614
MflI	RGATCY	1 cut(s)	78
MhlI	GDGCHC	4 cut(s)	433, 480, 606, 1057
MlsI	TGGCCA	1 cut(s)	503
MluCI	AATT	7 cut(s)	7, 63, 793, 923, 959, 1033, 1073
MluNI	TGGCCA	1 cut(s)	503
MlyI	GAGTC	1 cut(s)	1288
MmeI	TCCRAC	2 cut(s)	505, 1009
MnlI	CCTC	9 cut(s)	121, 127, 155, 164, 541, 617, 630, 641, 905
Mox20I	TGGCCA	1 cut(s)	503
MroXI	GAANNNNTTC	1 cut(s)	1008
MscI	TGGCCA	1 cut(s)	503
MseI	TTAA	6 cut(s)	489, 638, 756, 792, 921, 996
MslI	CAYNNNNRTG	1 cut(s)	401
Msp20I	TGGCCA	1 cut(s)	503
MspA1I	CMGCKG	1 cut(s)	55
MspCI	CTTAAG	1 cut(s)	995
MspI	CCGG	1 cut(s)	29
MspR9I	CCNGG	1 cut(s)	76
Mva1269I	GAATGC	2 cut(s)	463, 1044
MvaI	CCWGG	1 cut(s)	76
MvnI	CGCG	1 cut(s)	34
MwoI	GCNNNNNNNGC	4 cut(s)	38, 305, 527, 881
NcoI	CCATGG	2 cut(s)	15, 422
NdeII	GATC	4 cut(s)	78, 183, 564, 1058
NlaIII	CATG	8 cut(s)	19, 205, 391, 426, 508, 637, 724, 908
NlaIV	GGNNCC	3 cut(s)	59, 80, 420
NspI	RCATGY	1 cut(s)	205
NspV	TTCGAA	1 cut(s)	935
PciI	ACATGT	1 cut(s)	201
PctI	GAATGC	2 cut(s)	463, 1044
PdmI	GAANNNNTTC	1 cut(s)	1008
PfeI	GAWTC	1 cut(s)	384
PflMI	CCANNNNNTGG	1 cut(s)	75
PkrI	GCNGC	5 cut(s)	36, 54, 57, 685, 877
PleI	GAGTC	1 cut(s)	1288
PpsI	GAGTC	1 cut(s)	1288
Ppu21I	YACGTR	1 cut(s)	1276
PscI	ACATGT	1 cut(s)	201
PsiI	TTATAA	1 cut(s)	374
Psp6I	CCWGG	1 cut(s)	74
PspEI	GGTNACC	1 cut(s)	708
PspFI	CCCAGC	1 cut(s)	703
PspGI	CCWGG	1 cut(s)	74
PspN4I	GGNNCC	3 cut(s)	59, 80, 420
PspPI	GGNCC	2 cut(s)	142, 266
PstNI	CAGNNNCTG	1 cut(s)	700
PsuI	RGATCY	1 cut(s)	78
RsaI	GTAC	2 cut(s)	368, 858
RsaNI	GTAC	2 cut(s)	367, 857
RseI	CAYNNNNRTG	1 cut(s)	401
SaqAI	TTAA	6 cut(s)	489, 638, 756, 792, 921, 996
SatI	GCNGC	5 cut(s)	35, 53, 56, 684, 876
Sau3AI	GATC	4 cut(s)	78, 183, 564, 1058
Sau96I	GGNCC	2 cut(s)	142, 266
SchI	GAGTC	1 cut(s)	1288
ScrFI	CCNGG	1 cut(s)	76
SduI	GDGCHC	4 cut(s)	433, 480, 606, 1057
SfaNI	GCATC	3 cut(s)	127, 508, 562
SfcI	CTRYAG	2 cut(s)	241, 889
SfuI	TTCGAA	1 cut(s)	935
SinI	GGWCC	1 cut(s)	142
SmiMI	CAYNNNNRTG	1 cut(s)	401
SmlI	CTYRAG	3 cut(s)	745, 995, 1296
SmoI	CTYRAG	3 cut(s)	745, 995, 1296
Sse9I	AATT	7 cut(s)	7, 63, 793, 923, 959, 1033, 1073
SsiI	CCGC	8 cut(s)	20, 34, 37, 55, 114, 120, 140, 150
SspI	AATATT	2 cut(s)	819, 1149
SspMI	CTAG	1 cut(s)	557
StyD4I	CCNGG	1 cut(s)	74
StyI	CCWWGG	3 cut(s)	15, 422, 828
TaaI	ACNGT	1 cut(s)	497
TaiI	ACGT	2 cut(s)	171, 1278
TaqI	TCGA	5 cut(s)	135, 186, 587, 935, 1292
TasI	AATT	7 cut(s)	7, 63, 793, 923, 959, 1033, 1073
TatI	WGTACW	2 cut(s)	366, 856
TauI	GCSGC	2 cut(s)	37, 58
TfiI	GAWTC	1 cut(s)	384
Tru1I	TTAA	6 cut(s)	489, 638, 756, 792, 921, 996
Tru9I	TTAA	6 cut(s)	489, 638, 756, 792, 921, 996
TscAI	CASTG	3 cut(s)	276, 580, 661
TseI	GCWGC	3 cut(s)	52, 683, 875
TspDTI	ATGAA	7 cut(s)	326, 513, 611, 706, 763, 921, 1027
TspRI	CASTG	3 cut(s)	276, 580, 661
Van91I	CCANNNNNTGG	1 cut(s)	75
Vha464I	CTTAAG	1 cut(s)	995
VpaK11BI	GGWCC	1 cut(s)	142
XapI	RAATTY	4 cut(s)	63, 923, 959, 1033
XceI	RCATGY	1 cut(s)	205
XcmI	CCANNNNNNNNNTGG	1 cut(s)	511
XmnI	GAANNNNTTC	1 cut(s)	1008
XspI	CTAG	1 cut(s)	557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.