Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004079

Physical Location & Seq

Genomic Coordinates Reverse (-)

57452216 .. 57453865

Gene Structure 1650 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ51057

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGGAACTGCCGGAGTTTTACGTCGGCGGATACTTCGACGGCCAGCTATCCACCGAGAAGAGGCAGCTGGCGGACCAGAAGCCGGCCGGCGGCGAGCAATTCACCATCGACGACCTCCTCGACTTCTCCAACGAGGACGCTCTCGTCACCGACGGCTTCTTCGACAGCACCGTCGCCGGTAACTCCACCGACTCCTCCACCGTCACCGCCGTCGACAGCTGTAACTCCTCCGTCTCAGGCGGTGAGCCTCAATTATCCGGTAACCGGAGCTTCGGCGACTCTCAGTTCTCCGGCGACCTCTGCGTTCCGTACGACGACTTGGCTGAGCTGGAATGGCTATCGAACTTTGTGGAAGACTCGTTCTCAGTAGACAAAGACCTTCAAGCCCTTCAAATCCTCTCCACAACCACCGCAAAACCCCAAACCCCCGAAACGTCCTCCTCCTCCGCCGAAACGCCGCAAAACCCGCCGCTCTTCCACCACGAGACTCCTCTCCCCGGCAAGGCCCGAAGCAAGCGCTCACGCGCTGCCCCCGGCGACTGGACCACGCGCCTCCTCCACCTCATCACTCCCAACAACAGCAGCGAGCCCAAGCCGGCGCCCAAAACGACGACGTCGTCGCAGAAGAAGAGAGAAGGCGGCAACTGCAACTCGGGCTCGGACTCTTCGGGCCGGAAATGCCTCCACTGCGCCTCGGAGAAGACGCCCCAGTGGCGGACCGGGCCCATGGGCCCAAAGACGCTGTGCAACGCCTGTGGGGTCCGCTACAAGTCGGGTCGGCTGGTGCCCGAGTACCGACCCGCGGCGAGCCCGACATTTGTGTCGGCCCGGCATTCGAATTCGCACCGGAAGGTTCTGGAGCTGCGGCGGCAGAAGGAGTTTCAGAGGTCACATCAGCATCAGTTTCTGAGCCCGAGTTCCATTTTTGGCGTATCCAACGGTGGTGGGGATGAGTTCTTGATCCACCACCGAGGTGCGAACGATTTTCGACAGATGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GATA

Protein Analysis

333

Amino Acids

36.37

Weight (kDa)

6.07

Isoelectric Point (pI)

52.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATA	PF00320	227 - 261	6.6e-14	GATA zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32890 AT5G25830
fragaria_vesca	FvH4_2g35450 FvH4_6g32190
malus_domestica	MD08G1113200.v1.1 MD09G1205600.v1.1 MD15G1092500.v1.1 MD17G1185900.v1.1
prunus_persica	Prupe.1G447300_v2.0.a1 Prupe.1G447400_v2.0.a1 Prupe.3G060900_v2.0.a1
pyrus_communis	pycom08g09390 pycom17g19520
rosa_chinensis	RchiOBHm_Chr2g0140091
rosa_laevigata	RLG00000010798 RLG00000019848
rosa_multiflora	Rmu_co8403039.1_g000001 Rmu_sc0002971.1_g000022 Rmu_sc0003244.1_g000030
rosa_roxburghii	Rroxscaffold_2G00105070 Rroxscaffold_7G00161780
rosa_rugosa	Rorug02G0361000.1 Rorug06G0349300
rosa_samantha	Rh2AG411700 Rh2BG422000 Rh2CG397800 Rh2DG431400 Rh6AG461600 Rh6BG439500 Rh6CG475600 Rh6DG462400
rosa_wichuraiana	Rw2G033730 Rw6G040230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	4 cut(s)	143, 170, 616, 820
AatII	GACGTC	1 cut(s)	617
AccB1I	GGYRCC	2 cut(s)	598, 784
AccBSI	CCGCTC	1 cut(s)	472
AccI	GTMKAC	2 cut(s)	213, 369
AccII	CGCG	3 cut(s)	525, 550, 803
AclWI	GGATC	1 cut(s)	955
AcoI	YGGCCR	2 cut(s)	40, 84
AcsI	RAATTY	1 cut(s)	838
AcyI	GRCGYC	3 cut(s)	599, 614, 704
AfaI	GTAC	2 cut(s)	311, 794
AfeI	AGCGCT	1 cut(s)	518
AfiI	CCNNNNNNNGG	9 cut(s)	60, 82, 89, 264, 497, 502, 540, 714, 802
AgsI	TTSAA	2 cut(s)	383, 392
AleI	CACNNNNGTG	1 cut(s)	972
AloI	GAACNNNNNNTCC	2 cut(s)	344, 376
AluBI	AGCT	6 cut(s)	46, 67, 219, 270, 328, 862
AluI	AGCT	6 cut(s)	46, 67, 219, 270, 328, 862
Alw26I	GTCTC	2 cut(s)	238, 479
AlwI	GGATC	1 cut(s)	955
AlwNI	CAGNNNCTG	1 cut(s)	907
Ama87I	CYCGRG	3 cut(s)	652, 788, 913
Aor51HI	AGCGCT	1 cut(s)	518
AoxI	GGCC	7 cut(s)	40, 84, 504, 670, 722, 730, 825
ApaI	GGGCCC	2 cut(s)	726, 734
ApeKI	GCWGC	4 cut(s)	64, 527, 582, 862
ApoI	RAATTY	1 cut(s)	838
ArsI	GACNNNNNNTTYG	2 cut(s)	143, 175
AspLEI	GCGC	5 cut(s)	519, 527, 552, 601, 692
AsuC2I	CCSGG	4 cut(s)	498, 534, 721, 829
AsuHPI	GGTGA	4 cut(s)	94, 139, 196, 254
AsuII	TTCGAA	1 cut(s)	836
AvaI	CYCGRG	3 cut(s)	652, 788, 913
AvaII	GGWCC	4 cut(s)	73, 543, 717, 760
BaeGI	GKGCMC	3 cut(s)	726, 734, 789
BanI	GGYRCC	2 cut(s)	598, 784
BanII	GRGCYC	6 cut(s)	591, 659, 726, 734, 812, 914
BauI	CACGAG	1 cut(s)	482
BbsI	GAAGAC	2 cut(s)	360, 707
BbvI	GCAGC	4 cut(s)	76, 514, 594, 849
BccI	CCATC	1 cut(s)	113
BceAI	ACGGC	3 cut(s)	55, 169, 194
BciVI	GTATCC	2 cut(s)	23, 943
BcnI	CCSGG	4 cut(s)	498, 534, 721, 829
BcoDI	GTCTC	2 cut(s)	238, 479
BfoI	RGCGCY	2 cut(s)	520, 602
BfuI	GTATCC	2 cut(s)	23, 943
BglI	GCCNNNNNGGC	1 cut(s)	712
BlpI	GCTNAGC	1 cut(s)	324
Bme1390I	CCNGG	4 cut(s)	498, 534, 721, 829
Bme18I	GGWCC	4 cut(s)	73, 543, 717, 760
BmeT110I	CYCGRG	3 cut(s)	652, 788, 913
BmiI	GGNNCC	5 cut(s)	600, 724, 732, 761, 786
BmrFI	CCNGG	4 cut(s)	498, 534, 721, 829
BmrI	ACTGGG	1 cut(s)	703
BmsI	GCATC	1 cut(s)	907
BmuI	ACTGGG	1 cut(s)	703
BpiI	GAAGAC	2 cut(s)	360, 707
BpmI	CTGGAG	1 cut(s)	878
Bpu1102I	GCTNAGC	1 cut(s)	324
Bpu14I	TTCGAA	1 cut(s)	836
BpuMI	CCSGG	4 cut(s)	498, 534, 721, 829
BsaHI	GRCGYC	3 cut(s)	599, 614, 704
BsaJI	CCNNGG	6 cut(s)	496, 532, 693, 726, 801, 970
BsaWI	WCCGGW	3 cut(s)	257, 264, 846
Bsc4I	CCNNNNNNNGG	9 cut(s)	60, 82, 89, 264, 497, 502, 540, 714, 802
Bse118I	RCCGGY	4 cut(s)	82, 86, 176, 595
Bse1I	ACTGG	2 cut(s)	545, 709
BseDI	CCNNGG	6 cut(s)	496, 532, 693, 726, 801, 970
BseGI	GGATG	1 cut(s)	955
BseLI	CCNNNNNNNGG	9 cut(s)	60, 82, 89, 264, 497, 502, 540, 714, 802
BseMII	CTCAG	5 cut(s)	249, 296, 315, 378, 899
BseNI	ACTGG	2 cut(s)	545, 709
BseRI	GAGGAG	7 cut(s)	107, 184, 217, 430, 433, 480, 545
BseSI	GKGCMC	3 cut(s)	726, 734, 789
BseX3I	CGGCCG	1 cut(s)	84
BseXI	GCAGC	4 cut(s)	76, 514, 594, 849
Bsh1236I	CGCG	3 cut(s)	525, 550, 803
Bsh1285I	CGRYCG	1 cut(s)	87
BshFI	GGCC	7 cut(s)	42, 86, 506, 672, 724, 732, 827
BshNI	GGYRCC	2 cut(s)	598, 784
BsiEI	CGRYCG	1 cut(s)	87
BsiHKCI	CYCGRG	3 cut(s)	652, 788, 913
BsiWI	CGTACG	1 cut(s)	309
BslI	CCNNNNNNNGG	9 cut(s)	60, 82, 89, 264, 497, 502, 540, 714, 802
BsmAI	GTCTC	2 cut(s)	238, 479
BsmBI	CGTCTC	1 cut(s)	238
BsmI	GAATGC	1 cut(s)	832
BsnI	GGCC	7 cut(s)	42, 86, 506, 672, 724, 732, 827
BsoBI	CYCGRG	3 cut(s)	652, 788, 913
Bsp119I	TTCGAA	1 cut(s)	836
Bsp120I	GGGCCC	2 cut(s)	722, 730
Bsp1286I	GDGCHC	7 cut(s)	591, 659, 726, 734, 789, 812, 914
Bsp143I	GATC	1 cut(s)	960
Bsp1720I	GCTNAGC	1 cut(s)	324
Bsp19I	CCATGG	1 cut(s)	726
BspANI	GGCC	7 cut(s)	42, 86, 506, 672, 724, 732, 827
BspCNI	CTCAG	5 cut(s)	248, 295, 316, 377, 900
BspFNI	CGCG	3 cut(s)	525, 550, 803
BspLI	GGNNCC	5 cut(s)	600, 724, 732, 761, 786
BspPI	GGATC	1 cut(s)	955
BspQI	GCTCTTC	1 cut(s)	479
BspT104I	TTCGAA	1 cut(s)	836
BspT107I	GGYRCC	2 cut(s)	598, 784
BsrBI	CCGCTC	1 cut(s)	472
BsrFI	RCCGGY	4 cut(s)	82, 86, 176, 595
BsrI	ACTGG	2 cut(s)	545, 709
BssAI	RCCGGY	4 cut(s)	82, 86, 176, 595
BssECI	CCNNGG	6 cut(s)	496, 532, 693, 726, 801, 970
BssMI	GATC	1 cut(s)	960
BssNI	GRCGYC	3 cut(s)	599, 614, 704
BssSI	CACGAG	1 cut(s)	482
BssT1I	CCWWGG	1 cut(s)	726
Bst2BI	CACGAG	1 cut(s)	482
Bst4CI	ACNGT	3 cut(s)	172, 202, 941
Bst6I	CTCTTC	4 cut(s)	53, 479, 623, 670
BstACI	GRCGYC	3 cut(s)	599, 614, 704
BstBI	TTCGAA	1 cut(s)	836
BstC8I	GCNNGC	9 cut(s)	44, 69, 84, 88, 95, 515, 587, 597, 808
BstDEI	CTNAG	5 cut(s)	235, 282, 324, 364, 908
BstDSI	CCRYGG	2 cut(s)	726, 801
BstEII	GGTNACC	1 cut(s)	260
BstF5I	GGATG	1 cut(s)	955
BstFNI	CGCG	3 cut(s)	525, 550, 803
BstH2I	RGCGCY	2 cut(s)	520, 602
BstHHI	GCGC	5 cut(s)	519, 527, 552, 601, 692
BstKTI	GATC	1 cut(s)	963
BstMAI	GTCTC	2 cut(s)	238, 479
BstMBI	GATC	1 cut(s)	960
BstMCI	CGRYCG	1 cut(s)	87
BstPI	GGTNACC	1 cut(s)	260
BstSCI	CCNGG	4 cut(s)	496, 532, 719, 827
BstSLI	GKGCMC	3 cut(s)	726, 734, 789
BstUI	CGCG	3 cut(s)	525, 550, 803
BstV1I	GCAGC	4 cut(s)	76, 514, 594, 849
BstV2I	GAAGAC	2 cut(s)	360, 707
BstZI	CGGCCG	1 cut(s)	84
BsuI	GTATCC	2 cut(s)	23, 943
BsuRI	GGCC	7 cut(s)	42, 86, 506, 672, 724, 732, 827
BtgI	CCRYGG	2 cut(s)	726, 801
BtsCI	GGATG	1 cut(s)	955
BtsI	GCAGTG	1 cut(s)	685
BtsIMutI	CAGTG	2 cut(s)	685, 716
Cac8I	GCNNGC	9 cut(s)	44, 69, 84, 88, 95, 515, 587, 597, 808
CaiI	CAGNNNCTG	1 cut(s)	907
CfoI	GCGC	5 cut(s)	519, 527, 552, 601, 692
Cfr10I	RCCGGY	4 cut(s)	82, 86, 176, 595
Cfr42I	CCGCGG	1 cut(s)	804
CpoI	CGGWCCG	1 cut(s)	717
CseI	GACGC	3 cut(s)	146, 712, 748
Csp6I	GTAC	2 cut(s)	310, 793
CspCI	CAANNNNNGTGG	4 cut(s)	736, 771, 925, 960
CspI	CGGWCCG	1 cut(s)	717
CviAII	CATG	1 cut(s)	727
CviQI	GTAC	2 cut(s)	310, 793
DdeI	CTNAG	5 cut(s)	235, 282, 324, 364, 908
DinI	GGCGCC	1 cut(s)	600
DpnI	GATC	1 cut(s)	962
DpnII	GATC	1 cut(s)	960
DrdI	GACNNNNNNGTC	4 cut(s)	143, 170, 616, 820
DseDI	GACNNNNNNGTC	4 cut(s)	143, 170, 616, 820
EaeI	YGGCCR	2 cut(s)	40, 84
EagI	CGGCCG	1 cut(s)	84
Eam1104I	CTCTTC	4 cut(s)	53, 479, 623, 670
EarI	CTCTTC	4 cut(s)	53, 479, 623, 670
EciI	GGCGGA	4 cut(s)	42, 86, 436, 730
EclXI	CGGCCG	1 cut(s)	84
Eco130I	CCWWGG	1 cut(s)	726
Eco24I	GRGCYC	6 cut(s)	591, 659, 726, 734, 812, 914
Eco47I	GGWCC	4 cut(s)	73, 543, 717, 760
Eco47III	AGCGCT	1 cut(s)	518
Eco52I	CGGCCG	1 cut(s)	84
Eco88I	CYCGRG	3 cut(s)	652, 788, 913
Eco91I	GGTNACC	1 cut(s)	260
EcoO65I	GGTNACC	1 cut(s)	260
EcoRI	GAATTC	1 cut(s)	838
EcoT14I	CCWWGG	1 cut(s)	726
EcoT38I	GRGCYC	6 cut(s)	591, 659, 726, 734, 812, 914
EgeI	GGCGCC	1 cut(s)	600
EheI	GGCGCC	1 cut(s)	600
ErhI	CCWWGG	1 cut(s)	726
Esp3I	CGTCTC	1 cut(s)	238
FaeI	CATG	1 cut(s)	730
FaiI	YATR	1 cut(s)	728
FatI	CATG	1 cut(s)	726
FauI	CCCGC	2 cut(s)	474, 808
FblI	GTMKAC	2 cut(s)	213, 369
FokI	GGATG	1 cut(s)	962
FriOI	GRGCYC	6 cut(s)	591, 659, 726, 734, 812, 914
GlaI	GCGC	5 cut(s)	518, 526, 551, 600, 691
GsuI	CTGGAG	1 cut(s)	878
HaeII	RGCGCY	2 cut(s)	520, 602
HaeIII	GGCC	7 cut(s)	42, 86, 506, 672, 724, 732, 827
HgaI	GACGC	3 cut(s)	146, 712, 748
HhaI	GCGC	5 cut(s)	519, 527, 552, 601, 692
Hin1I	GRCGYC	3 cut(s)	599, 614, 704
Hin1II	CATG	1 cut(s)	730
Hin6I	GCGC	5 cut(s)	517, 525, 550, 599, 690
HinP1I	GCGC	5 cut(s)	517, 525, 550, 599, 690
HincII	GTYRAC	1 cut(s)	214
HindII	GTYRAC	1 cut(s)	214
HinfI	GANTC	5 cut(s)	191, 278, 356, 487, 662
HphI	GGTGA	4 cut(s)	94, 139, 196, 254
Hpy166II	GTNNAC	2 cut(s)	214, 370
Hpy188I	TCNGA	4 cut(s)	661, 697, 885, 909
Hpy188III	TCNNGA	2 cut(s)	857, 958
Hpy8I	GTNNAC	2 cut(s)	214, 370
HpyAV	CCTTC	5 cut(s)	389, 398, 629, 844, 868
HpyCH4III	ACNGT	3 cut(s)	172, 202, 941
HpyCH4IV	ACGT	3 cut(s)	21, 434, 614
HpyCH4V	TGCA	2 cut(s)	648, 747
HpyF3I	CTNAG	5 cut(s)	235, 282, 324, 364, 908
HpySE526I	ACGT	3 cut(s)	21, 434, 614
Hsp92I	GRCGYC	3 cut(s)	599, 614, 704
Hsp92II	CATG	1 cut(s)	730
HspAI	GCGC	5 cut(s)	517, 525, 550, 599, 690
KasI	GGCGCC	1 cut(s)	598
KroI	GCCGGC	3 cut(s)	82, 86, 595
KroNI	GCCGGC	3 cut(s)	84, 88, 597
KspI	CCGCGG	1 cut(s)	804
Kzo9I	GATC	1 cut(s)	960
LguI	GCTCTTC	1 cut(s)	479
LmnI	GCTCC	2 cut(s)	267, 859
Lsp1109I	GCAGC	4 cut(s)	76, 514, 594, 849
LweI	GCATC	1 cut(s)	907
MaeII	ACGT	3 cut(s)	21, 434, 614
MaeIII	GTNAC	6 cut(s)	145, 179, 202, 221, 260, 888
MalI	GATC	1 cut(s)	962
MbiI	CCGCTC	1 cut(s)	472
MboI	GATC	1 cut(s)	960
MboII	GAAGA	8 cut(s)	70, 151, 365, 466, 637, 640, 657, 712
MhlI	GDGCHC	7 cut(s)	591, 659, 726, 734, 789, 812, 914
MluCI	AATT	3 cut(s)	98, 251, 838
Mly113I	GGCGCC	1 cut(s)	599
MlyI	GAGTC	5 cut(s)	185, 272, 350, 481, 656
MmeI	TCCRAC	2 cut(s)	153, 960
MroNI	GCCGGC	3 cut(s)	82, 86, 595
MslI	CAYNNNNRTG	1 cut(s)	972
MspA1I	CMGCKG	3 cut(s)	67, 219, 803
MspR9I	CCNGG	4 cut(s)	498, 534, 721, 829
Mva1269I	GAATGC	1 cut(s)	832
MvnI	CGCG	3 cut(s)	525, 550, 803
NaeI	GCCGGC	3 cut(s)	84, 88, 597
NarI	GGCGCC	1 cut(s)	599
NciI	CCSGG	4 cut(s)	498, 534, 721, 829
NcoI	CCATGG	1 cut(s)	726
NdeII	GATC	1 cut(s)	960
NgoMIV	GCCGGC	3 cut(s)	82, 86, 595
NlaIII	CATG	1 cut(s)	730
NlaIV	GGNNCC	5 cut(s)	600, 724, 732, 761, 786
NmuCI	GTSAC	3 cut(s)	145, 202, 888
NspV	TTCGAA	1 cut(s)	836
OliI	CACNNNNGTG	1 cut(s)	972
PciSI	GCTCTTC	1 cut(s)	479
PcsI	WCGNNNNNNNCGW	4 cut(s)	117, 159, 168, 614
PctI	GAATGC	1 cut(s)	832
PdiI	GCCGGC	3 cut(s)	84, 88, 597
Pfl23II	CGTACG	1 cut(s)	309
PflFI	GACNNNGTC	2 cut(s)	613, 616
PleI	GAGTC	5 cut(s)	185, 272, 350, 481, 656
PluTI	GGCGCC	1 cut(s)	602
PpsI	GAGTC	5 cut(s)	185, 272, 350, 481, 656
PspEI	GGTNACC	1 cut(s)	260
PspLI	CGTACG	1 cut(s)	309
PspN4I	GGNNCC	5 cut(s)	600, 724, 732, 761, 786
PspOMI	GGGCCC	2 cut(s)	722, 730
PstNI	CAGNNNCTG	1 cut(s)	907
PsyI	GACNNNGTC	2 cut(s)	613, 616
PvuII	CAGCTG	2 cut(s)	67, 219
RsaI	GTAC	2 cut(s)	311, 794
RsaNI	GTAC	2 cut(s)	310, 793
RseI	CAYNNNNRTG	1 cut(s)	972
Rsr2I	CGGWCCG	1 cut(s)	717
RsrII	CGGWCCG	1 cut(s)	717
SacII	CCGCGG	1 cut(s)	804
SalI	GTCGAC	1 cut(s)	212
SapI	GCTCTTC	1 cut(s)	479
Sau3AI	GATC	1 cut(s)	960
SchI	GAGTC	5 cut(s)	185, 272, 350, 481, 656
ScrFI	CCNGG	4 cut(s)	498, 534, 721, 829
SduI	GDGCHC	7 cut(s)	591, 659, 726, 734, 789, 812, 914
SfaNI	GCATC	1 cut(s)	907
SfoI	GGCGCC	1 cut(s)	600
Sfr303I	CCGCGG	1 cut(s)	804
SfuI	TTCGAA	1 cut(s)	836
SgrBI	CCGCGG	1 cut(s)	804
SinI	GGWCC	4 cut(s)	73, 543, 717, 760
SmiMI	CAYNNNNRTG	1 cut(s)	972
Sse9I	AATT	3 cut(s)	98, 251, 838
SspDI	GGCGCC	1 cut(s)	598
StyD4I	CCNGG	4 cut(s)	496, 532, 719, 827
StyI	CCWWGG	1 cut(s)	726
TaaI	ACNGT	3 cut(s)	172, 202, 941
TaiI	ACGT	3 cut(s)	24, 437, 617
TaqI	TCGA	8 cut(s)	36, 108, 120, 162, 213, 341, 836, 988
TasI	AATT	3 cut(s)	98, 251, 838
TauI	GCSGC	7 cut(s)	93, 460, 472, 642, 806, 868, 871
TscAI	CASTG	2 cut(s)	692, 716
TseFI	GTSAC	3 cut(s)	145, 202, 888
TseI	GCWGC	4 cut(s)	64, 527, 582, 862
Tsp45I	GTSAC	3 cut(s)	145, 202, 888
TspGWI	ACGGA	2 cut(s)	220, 297
TspRI	CASTG	2 cut(s)	692, 716
Tth111I	GACNNNGTC	2 cut(s)	613, 616
VpaK11BI	GGWCC	4 cut(s)	73, 543, 717, 760
XapI	RAATTY	1 cut(s)	838
XmiI	GTMKAC	2 cut(s)	213, 369
ZraI	GACGTC	1 cut(s)	615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.