Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0004079

Physical Location & Seq

Genomic Coordinates Reverse (-)

64498952 .. 64501168

Gene Structure 2217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG461600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1143 bp

ATGGAGGCACCCGAATATTTTCAGAACAGCTTCTGCCCACAATTCGTAACCGAAAAGCAGCGACACTCTTTCGACAACACCAAGGCCAACAATGGCGCCGGTGCAGGCGACGGTTTCATGGTGGAGGACCTTCTTGACTTTTCTAACGACGACGCTGTCATTACCGACGCTGCTGCTGCTGCTTTTGATAACGTCACCGGAAACTCCACAGACTCCTCCACCCTCACCGTCATCGACAGCAGCTGCAATTCTTCCTCTTTATCCGGCTGCGAACCGGCCAATTTCCCCGCCGATTTCGGAAGCCGGAATTTCAACGAAGTCCCCTTCTCCAGTGACCTCTGCGTTCCGTACGACGATTTAGCTGAGCTCGAATGGCAGCTCTCGAGTTTCTCGGAGGAGTCGTTTTCCAGCGAGGACCTCCAGAAGCTGCAGCTCATATCCGGAATGAAAGCCCGACCCGACGAGGCCGCCTCCGAGACCCGCCACTTCCAACCTGACCCAAACAACCACATCATCAGCAACCACAATAATAACAACCCGATATTCAACTCGGATATTTCGGTACCCGCCAAGGCGCGGAGTAAACGGTCCCGGGCAGCCCCGTGCAACTGGACTTCCCGCCTCCTCCTTCTCACGCCTAAAGAATCCTCTCCGGAGTCGTCCGACGTCGTCATTTCCGAACCGCCGTCGCTGCCTCCGGTGGAGTCTAGTGTCGGCAAGAAGACACTAAAGGCCGCGCCAAAGAAGAAGGAGAATCCAGAAGGCGGCGCCGCCTTGCCCGGGGACGGCCGGAAGTGTCTGCATTGCTCAACGGAAAAGACTCCGCAGTGGCGGACAGGGCCCATGGGCCCGAAGACGCTCTGCAACGCCTGCGGAGTCAGGTATAAGTCGGGCCGGCTCGTGCCTGAGTACAGGCCCGCGGCCAGCCCGACTTTCGTGCTAACGAAGCACTCCAACTCGCACCGTAAGGTGCTGGAGCTGCGGCGGCAGAAAGAGATGGTGAGAGCTCAGCACCAGTACATTCATCACCAGCCACCGCCGCACCACCACCACCACCATAATCCCAACATGATTTTCGACGTTAATGGCGGTGATTACTTGATTCACCAACACGTGGGGCCCGATTTCAGGCAGCTGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905177 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GATA

Protein Analysis

380

Amino Acids

41.94

Weight (kDa)

6.13

Isoelectric Point (pI)

52.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATA	PF00320	266 - 300	1.7e-14	GATA zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32890 AT5G25830
fragaria_vesca	FvH4_2g35450 FvH4_6g32190
malus_domestica	MD08G1113200.v1.1 MD09G1205600.v1.1 MD15G1092500.v1.1 MD17G1185900.v1.1
prunus_persica	Prupe.1G447300_v2.0.a1 Prupe.1G447400_v2.0.a1 Prupe.3G060900_v2.0.a1
pyrus_communis	pycom08g09390 pycom17g19520
rosa_chinensis	RchiOBHm_Chr2g0140091
rosa_laevigata	RLG00000010798 RLG00000019848
rosa_multiflora	Rmu_co8403039.1_g000001 Rmu_sc0002971.1_g000022 Rmu_sc0003244.1_g000030
rosa_roxburghii	Rroxscaffold_2G00105070 Rroxscaffold_7G00161780
rosa_rugosa	Rorug02G0361000.1 Rorug06G0349300
rosa_samantha	Rh2AG411700 Rh2BG422000 Rh2CG397800 Rh2DG431400 Rh6AG461600 Rh6BG439500 Rh6CG475600 Rh6DG462400
rosa_wichuraiana	Rw2G033730 Rw6G040230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	155
AatII	GACGTC	1 cut(s)	669
Acc65I	GGTACC	1 cut(s)	562
AccB1I	GGYRCC	4 cut(s)	7, 95, 562, 767
AccB7I	CCANNNNNTGG	1 cut(s)	1114
AccII	CGCG	3 cut(s)	577, 737, 920
AccIII	TCCGGA	2 cut(s)	440, 652
AcoI	YGGCCR	3 cut(s)	276, 787, 921
AcsI	RAATTY	1 cut(s)	307
AcvI	CACGTG	1 cut(s)	1114
AcyI	GRCGYC	3 cut(s)	96, 666, 768
AfaI	GTAC	4 cut(s)	350, 564, 911, 1019
AfiI	CCNNNNNNNGG	6 cut(s)	576, 764, 780, 785, 1114, 1128
AflIII	ACRYGT	1 cut(s)	1111
AgsI	TTSAA	2 cut(s)	313, 547
AjuI	GAANNNNNNNTTGG	2 cut(s)	1058, 1090
Alw21I	GWGCWC	2 cut(s)	369, 1009
Alw26I	GTCTC	1 cut(s)	470
AlwNI	CAGNNNCTG	3 cut(s)	33, 243, 427
Ama87I	CYCGRG	3 cut(s)	382, 591, 779
Aor13HI	TCCGGA	2 cut(s)	440, 652
ApaI	GGGCCC	3 cut(s)	843, 851, 1122
ApoI	RAATTY	1 cut(s)	307
Asp700I	GAANNNNTTC	2 cut(s)	18, 29
Asp718I	GGTACC	1 cut(s)	562
AspLEI	GCGC	4 cut(s)	98, 577, 739, 770
AsuC2I	CCSGG	4 cut(s)	592, 593, 780, 781
AsuHPI	GGTGA	6 cut(s)	187, 217, 1012, 1019, 1097, 1103
AvaI	CYCGRG	3 cut(s)	382, 591, 779
AvaII	GGWCC	3 cut(s)	127, 415, 588
BaeGI	GKGCMC	3 cut(s)	843, 851, 1122
BanI	GGYRCC	4 cut(s)	7, 95, 562, 767
BanII	GRGCYC	5 cut(s)	369, 843, 851, 1009, 1122
BauI	CACGAG	1 cut(s)	899
BbrPI	CACGTG	1 cut(s)	1114
BbsI	GAAGAC	2 cut(s)	728, 860
Bbv12I	GWGCWC	2 cut(s)	369, 1009
BccI	CCATC	1 cut(s)	991
BceAI	ACGGC	2 cut(s)	670, 802
BcgI	CGANNNNNNTGC	4 cut(s)	155, 189, 919, 953
BcnI	CCSGG	4 cut(s)	592, 593, 780, 781
BcoDI	GTCTC	1 cut(s)	470
BfaI	CTAG	2 cut(s)	708, 1141
BfmI	CTRYAG	1 cut(s)	428
BfoI	RGCGCY	2 cut(s)	99, 771
BlpI	GCTNAGC	2 cut(s)	363, 1008
Bme1390I	CCNGG	4 cut(s)	592, 593, 780, 781
Bme18I	GGWCC	3 cut(s)	127, 415, 588
BmeT110I	CYCGRG	3 cut(s)	382, 591, 779
BmiI	GGNNCC	9 cut(s)	9, 97, 564, 590, 769, 841, 849, 1119, 1120
BmrFI	CCNGG	4 cut(s)	592, 593, 780, 781
BpiI	GAAGAC	2 cut(s)	728, 860
BplI	GAGNNNNNCTC	2 cut(s)	455, 487
BpmI	CTGGAG	3 cut(s)	313, 404, 995
Bpu1102I	GCTNAGC	2 cut(s)	363, 1008
BpuMI	CCSGG	4 cut(s)	592, 593, 780, 781
BsaAI	YACGTR	1 cut(s)	1114
BsaHI	GRCGYC	3 cut(s)	96, 666, 768
BsaI	GGTCTC	1 cut(s)	470
BsaJI	CCNNGG	7 cut(s)	81, 570, 591, 779, 780, 843, 918
BsaWI	WCCGGW	4 cut(s)	197, 440, 652, 697
BsaXI	ACNNNNNCTCC	2 cut(s)	386, 416
Bsc4I	CCNNNNNNNGG	6 cut(s)	576, 764, 780, 785, 1114, 1128
Bse118I	RCCGGY	3 cut(s)	98, 274, 894
Bse1I	ACTGG	3 cut(s)	330, 614, 1015
Bse3DI	GCAATG	1 cut(s)	802
BseAI	TCCGGA	2 cut(s)	440, 652
BseDI	CCNNGG	7 cut(s)	81, 570, 591, 779, 780, 843, 918
BseLI	CCNNNNNNNGG	6 cut(s)	576, 764, 780, 785, 1114, 1128
BseMI	GCAATG	1 cut(s)	802
BseMII	CTCAG	3 cut(s)	354, 897, 1022
BseNI	ACTGG	3 cut(s)	330, 614, 1015
BseRI	GAGGAG	3 cut(s)	205, 410, 614
BseSI	GKGCMC	3 cut(s)	843, 851, 1122
BseX3I	CGGCCG	1 cut(s)	787
BsgI	GTGCAG	1 cut(s)	123
Bsh1236I	CGCG	3 cut(s)	577, 737, 920
Bsh1285I	CGRYCG	1 cut(s)	790
BshNI	GGYRCC	4 cut(s)	7, 95, 562, 767
BsiEI	CGRYCG	1 cut(s)	790
BsiHKAI	GWGCWC	2 cut(s)	369, 1009
BsiHKCI	CYCGRG	3 cut(s)	382, 591, 779
BsiWI	CGTACG	1 cut(s)	348
BslFI	GGGAC	3 cut(s)	305, 574, 797
BslI	CCNNNNNNNGG	6 cut(s)	576, 764, 780, 785, 1114, 1128
BsmAI	GTCTC	1 cut(s)	470
BsmFI	GGGAC	3 cut(s)	305, 574, 797
Bso31I	GGTCTC	1 cut(s)	470
BsoBI	CYCGRG	3 cut(s)	382, 591, 779
Bsp120I	GGGCCC	3 cut(s)	839, 847, 1118
Bsp1286I	GDGCHC	5 cut(s)	369, 843, 851, 1009, 1122
Bsp13I	TCCGGA	2 cut(s)	440, 652
Bsp143I	GATC	1 cut(s)	1137
Bsp1720I	GCTNAGC	2 cut(s)	363, 1008
Bsp19I	CCATGG	1 cut(s)	843
BspCNI	CTCAG	3 cut(s)	355, 898, 1021
BspEI	TCCGGA	2 cut(s)	440, 652
BspFNI	CGCG	3 cut(s)	577, 737, 920
BspLI	GGNNCC	9 cut(s)	9, 97, 564, 590, 769, 841, 849, 1119, 1120
BspMAI	CTGCAG	1 cut(s)	432
BspT107I	GGYRCC	4 cut(s)	7, 95, 562, 767
BspTNI	GGTCTC	1 cut(s)	470
BsrDI	GCAATG	1 cut(s)	802
BsrFI	RCCGGY	3 cut(s)	98, 274, 894
BsrI	ACTGG	3 cut(s)	330, 614, 1015
BssAI	RCCGGY	3 cut(s)	98, 274, 894
BssECI	CCNNGG	7 cut(s)	81, 570, 591, 779, 780, 843, 918
BssMI	GATC	1 cut(s)	1137
BssNI	GRCGYC	3 cut(s)	96, 666, 768
BssSI	CACGAG	1 cut(s)	899
BssT1I	CCWWGG	3 cut(s)	81, 570, 843
Bst2BI	CACGAG	1 cut(s)	899
Bst4CI	ACNGT	4 cut(s)	113, 229, 588, 965
BstACI	GRCGYC	3 cut(s)	96, 666, 768
BstAPI	GCANNNNNTGC	1 cut(s)	870
BstBAI	YACGTR	1 cut(s)	1114
BstC8I	GCNNGC	5 cut(s)	106, 871, 896, 918, 925
BstDEI	CTNAG	3 cut(s)	363, 906, 1008
BstDSI	CCRYGG	2 cut(s)	843, 918
BstFNI	CGCG	3 cut(s)	577, 737, 920
BstH2I	RGCGCY	2 cut(s)	99, 771
BstHHI	GCGC	4 cut(s)	98, 577, 739, 770
BstKTI	GATC	1 cut(s)	1140
BstMAI	GTCTC	1 cut(s)	470
BstMBI	GATC	1 cut(s)	1137
BstMCI	CGRYCG	1 cut(s)	790
BstSCI	CCNGG	4 cut(s)	590, 591, 778, 779
BstSFI	CTRYAG	1 cut(s)	428
BstSLI	GKGCMC	3 cut(s)	843, 851, 1122
BstUI	CGCG	3 cut(s)	577, 737, 920
BstV2I	GAAGAC	2 cut(s)	728, 860
BstZI	CGGCCG	1 cut(s)	787
BtgI	CCRYGG	2 cut(s)	843, 918
BtsI	GCAGTG	1 cut(s)	833
BtsIMutI	CAGTG	2 cut(s)	337, 833
Cac8I	GCNNGC	5 cut(s)	106, 871, 896, 918, 925
CaiI	CAGNNNCTG	3 cut(s)	33, 243, 427
CfoI	GCGC	4 cut(s)	98, 577, 739, 770
Cfr10I	RCCGGY	3 cut(s)	98, 274, 894
Cfr42I	CCGCGG	1 cut(s)	921
Cfr9I	CCCGGG	2 cut(s)	591, 779
CseI	GACGC	3 cut(s)	161, 176, 865
Csp6I	GTAC	4 cut(s)	349, 563, 910, 1018
CviAII	CATG	3 cut(s)	118, 844, 1069
CviQI	GTAC	4 cut(s)	349, 563, 910, 1018
DdeI	CTNAG	3 cut(s)	363, 906, 1008
DinI	GGCGCC	2 cut(s)	97, 769
DpnI	GATC	1 cut(s)	1139
DpnII	GATC	1 cut(s)	1137
DrdI	GACNNNNNNGTC	1 cut(s)	155
DseDI	GACNNNNNNGTC	1 cut(s)	155
EaeI	YGGCCR	3 cut(s)	276, 787, 921
EagI	CGGCCG	1 cut(s)	787
EciI	GGCGGA	1 cut(s)	847
Ecl136II	GAGCTC	2 cut(s)	367, 1007
EclXI	CGGCCG	1 cut(s)	787
Eco130I	CCWWGG	3 cut(s)	81, 570, 843
Eco24I	GRGCYC	5 cut(s)	369, 843, 851, 1009, 1122
Eco31I	GGTCTC	1 cut(s)	470
Eco47I	GGWCC	3 cut(s)	127, 415, 588
Eco52I	CGGCCG	1 cut(s)	787
Eco53kI	GAGCTC	2 cut(s)	367, 1007
Eco72I	CACGTG	1 cut(s)	1114
Eco88I	CYCGRG	3 cut(s)	382, 591, 779
EcoICRI	GAGCTC	2 cut(s)	367, 1007
EcoO109I	RGGNCCY	4 cut(s)	127, 415, 839, 1118
EcoT14I	CCWWGG	3 cut(s)	81, 570, 843
EcoT38I	GRGCYC	5 cut(s)	369, 843, 851, 1009, 1122
EgeI	GGCGCC	2 cut(s)	97, 769
EheI	GGCGCC	2 cut(s)	97, 769
ErhI	CCWWGG	3 cut(s)	81, 570, 843
FaeI	CATG	3 cut(s)	121, 847, 1072
FaiI	YATR	6 cut(s)	119, 437, 845, 885, 1059, 1070
FaqI	GGGAC	3 cut(s)	305, 574, 797
FatI	CATG	3 cut(s)	117, 843, 1068
FauI	CCCGC	5 cut(s)	295, 488, 574, 626, 925
FriOI	GRGCYC	5 cut(s)	369, 843, 851, 1009, 1122
FspBI	CTAG	2 cut(s)	708, 1141
GlaI	GCGC	4 cut(s)	97, 576, 738, 769
GsuI	CTGGAG	3 cut(s)	313, 404, 995
HaeII	RGCGCY	2 cut(s)	99, 771
HgaI	GACGC	3 cut(s)	161, 176, 865
HhaI	GCGC	4 cut(s)	98, 577, 739, 770
Hin1I	GRCGYC	3 cut(s)	96, 666, 768
Hin1II	CATG	3 cut(s)	121, 847, 1072
Hin6I	GCGC	4 cut(s)	96, 575, 737, 768
HinP1I	GCGC	4 cut(s)	96, 575, 737, 768
HinfI	GANTC	9 cut(s)	212, 398, 644, 656, 704, 754, 820, 876, 1102
HphI	GGTGA	6 cut(s)	187, 217, 1012, 1019, 1097, 1103
Hpy166II	GTNNAC	1 cut(s)	584
Hpy188I	TCNGA	7 cut(s)	24, 299, 394, 475, 553, 664, 679
Hpy188III	TCNNGA	6 cut(s)	134, 382, 421, 441, 653, 758
Hpy8I	GTNNAC	1 cut(s)	584
HpyAV	CCTTC	5 cut(s)	140, 334, 638, 742, 755
HpyCH4III	ACNGT	4 cut(s)	113, 229, 588, 965
HpyCH4IV	ACGT	4 cut(s)	192, 666, 1080, 1113
HpyCH4V	TGCA	6 cut(s)	104, 246, 430, 606, 802, 864
HpyF3I	CTNAG	3 cut(s)	363, 906, 1008
HpySE526I	ACGT	4 cut(s)	192, 666, 1080, 1113
Hsp92I	GRCGYC	3 cut(s)	96, 666, 768
Hsp92II	CATG	3 cut(s)	121, 847, 1072
HspAI	GCGC	4 cut(s)	96, 575, 737, 768
KasI	GGCGCC	2 cut(s)	95, 767
Kpn2I	TCCGGA	2 cut(s)	440, 652
KpnI	GGTACC	1 cut(s)	566
KroI	GCCGGC	1 cut(s)	894
KroNI	GCCGGC	1 cut(s)	896
KspI	CCGCGG	1 cut(s)	921
Kzo9I	GATC	1 cut(s)	1137
LmnI	GCTCC	1 cut(s)	976
MaeI	CTAG	2 cut(s)	708, 1141
MaeII	ACGT	4 cut(s)	192, 666, 1080, 1113
MaeIII	GTNAC	3 cut(s)	46, 193, 332
MalI	GATC	1 cut(s)	1139
MboI	GATC	1 cut(s)	1137
MboII	GAAGA	4 cut(s)	243, 733, 757, 865
MhlI	GDGCHC	5 cut(s)	369, 843, 851, 1009, 1122
MluCI	AATT	4 cut(s)	41, 247, 280, 307
Mly113I	GGCGCC	2 cut(s)	96, 768
MlyI	GAGTC	6 cut(s)	206, 407, 665, 713, 814, 885
MmeI	TCCRAC	3 cut(s)	514, 687, 978
MroI	TCCGGA	2 cut(s)	440, 652
MroNI	GCCGGC	1 cut(s)	894
MroXI	GAANNNNTTC	2 cut(s)	18, 29
MseI	TTAA	1 cut(s)	1083
MspA1I	CMGCKG	3 cut(s)	243, 920, 1135
MspR9I	CCNGG	4 cut(s)	592, 593, 780, 781
MvnI	CGCG	3 cut(s)	577, 737, 920
NaeI	GCCGGC	1 cut(s)	896
NarI	GGCGCC	2 cut(s)	96, 768
NciI	CCSGG	4 cut(s)	592, 593, 780, 781
NcoI	CCATGG	1 cut(s)	843
NdeII	GATC	1 cut(s)	1137
NgoMIV	GCCGGC	1 cut(s)	894
NlaIII	CATG	3 cut(s)	121, 847, 1072
NlaIV	GGNNCC	9 cut(s)	9, 97, 564, 590, 769, 841, 849, 1119, 1120
NmuCI	GTSAC	2 cut(s)	193, 332
PaeR7I	CTCGAG	1 cut(s)	382
PcsI	WCGNNNNNNNCGW	3 cut(s)	398, 675, 1119
PdiI	GCCGGC	1 cut(s)	896
PdmI	GAANNNNTTC	2 cut(s)	18, 29
PfeI	GAWTC	3 cut(s)	644, 754, 1102
Pfl23II	CGTACG	1 cut(s)	348
PflFI	GACNNNGTC	2 cut(s)	155, 668
PflMI	CCANNNNNTGG	1 cut(s)	1114
PleI	GAGTC	6 cut(s)	206, 406, 664, 712, 814, 884
PluTI	GGCGCC	2 cut(s)	99, 771
PmaCI	CACGTG	1 cut(s)	1114
PmlI	CACGTG	1 cut(s)	1114
PpsI	GAGTC	6 cut(s)	206, 406, 664, 712, 814, 884
Ppu21I	YACGTR	1 cut(s)	1114
PpuMI	RGGWCCY	2 cut(s)	127, 415
Psp124BI	GAGCTC	2 cut(s)	369, 1009
Psp5II	RGGWCCY	2 cut(s)	127, 415
PspCI	CACGTG	1 cut(s)	1114
PspLI	CGTACG	1 cut(s)	348
PspN4I	GGNNCC	9 cut(s)	9, 97, 564, 590, 769, 841, 849, 1119, 1120
PspOMI	GGGCCC	3 cut(s)	839, 847, 1118
PspPPI	RGGWCCY	2 cut(s)	127, 415
PstI	CTGCAG	1 cut(s)	432
PstNI	CAGNNNCTG	3 cut(s)	33, 243, 427
PsyI	GACNNNGTC	2 cut(s)	155, 668
PvuII	CAGCTG	2 cut(s)	243, 1135
RsaI	GTAC	4 cut(s)	350, 564, 911, 1019
RsaNI	GTAC	4 cut(s)	349, 563, 910, 1018
SacI	GAGCTC	2 cut(s)	369, 1009
SacII	CCGCGG	1 cut(s)	921
SaqAI	TTAA	1 cut(s)	1083
Sau3AI	GATC	1 cut(s)	1137
SchI	GAGTC	6 cut(s)	206, 407, 665, 713, 814, 885
ScrFI	CCNGG	4 cut(s)	592, 593, 780, 781
SduI	GDGCHC	5 cut(s)	369, 843, 851, 1009, 1122
SfcI	CTRYAG	1 cut(s)	428
SfoI	GGCGCC	2 cut(s)	97, 769
Sfr274I	CTCGAG	1 cut(s)	382
Sfr303I	CCGCGG	1 cut(s)	921
SgrAI	CRCCGGYG	1 cut(s)	98
SgrBI	CCGCGG	1 cut(s)	921
SinI	GGWCC	3 cut(s)	127, 415, 588
SlaI	CTCGAG	1 cut(s)	382
SmaI	CCCGGG	2 cut(s)	593, 781
SmlI	CTYRAG	1 cut(s)	382
SmoI	CTYRAG	1 cut(s)	382
Sse9I	AATT	4 cut(s)	41, 247, 280, 307
SspDI	GGCGCC	2 cut(s)	95, 767
SspI	AATATT	1 cut(s)	17
SspMI	CTAG	2 cut(s)	708, 1141
SstI	GAGCTC	2 cut(s)	369, 1009
StyD4I	CCNGG	4 cut(s)	590, 591, 778, 779
StyI	CCWWGG	3 cut(s)	81, 570, 843
TaaI	ACNGT	4 cut(s)	113, 229, 588, 965
TaiI	ACGT	4 cut(s)	195, 669, 1083, 1116
TaqI	TCGA	5 cut(s)	72, 234, 369, 383, 1077
TasI	AATT	4 cut(s)	41, 247, 280, 307
TatI	WGTACW	2 cut(s)	909, 1017
TauI	GCSGC	8 cut(s)	470, 737, 768, 773, 923, 985, 988, 1042
TfiI	GAWTC	3 cut(s)	644, 754, 1102
Tru1I	TTAA	1 cut(s)	1083
Tru9I	TTAA	1 cut(s)	1083
TscAI	CASTG	2 cut(s)	337, 833
TseFI	GTSAC	2 cut(s)	193, 332
Tsp45I	GTSAC	2 cut(s)	193, 332
TspDTI	ATGAA	3 cut(s)	106, 461, 1013
TspGWI	ACGGA	2 cut(s)	336, 827
TspMI	CCCGGG	2 cut(s)	591, 779
TspRI	CASTG	2 cut(s)	337, 833
Tth111I	GACNNNGTC	2 cut(s)	155, 668
Van91I	CCANNNNNTGG	1 cut(s)	1114
VpaK11BI	GGWCC	3 cut(s)	127, 415, 588
XapI	RAATTY	1 cut(s)	307
XhoI	CTCGAG	1 cut(s)	382
XmaI	CCCGGG	2 cut(s)	591, 779
XmnI	GAANNNNTTC	2 cut(s)	18, 29
XspI	CTAG	2 cut(s)	708, 1141
ZraI	GACGTC	1 cut(s)	667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.