Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0004079

Physical Location & Seq

Genomic Coordinates Reverse (-)

64470983 .. 64473402

Gene Structure 2420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG475600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1155 bp

ATGGAGGCACCCGAATATTTTCAGAACAGCTTCTGCCCACAATTCGTAACCGAAAAGCAGCGACACTCTTTCGACAACACCAAGGCCAACAATGGCGCCGGTGCAGGCGACGGTTTCATGGTGGAGGACCTTCTTGACTTTTCTAACGACGACGCTGTCATTACCGACGCTGCTGCTGCTTCTGCTTTTGATAACGTCACCGGAAACTCCACCGACTCCTCCACCCTCACCGTCATCGACAGCAGCTGCAATTCTTCCTCGTTATCCGGCTGCGAACCGGCCAATTTCCCCGCCGATTTCGGAAGCCGGAATTTCAACGAAGTCCCCTTCTCCAGTGACCTCTGCGTTCCGTACGACGATTTAGCTGAGCTCGAATGGCAGCTCTCGAGTTTCTCGGAGGAGTCGTTTTCCAGCGAGGACCTCCAGAAGCTGCAGCTCATATCCGGAATGAAAGCCCGACCCGACGAGGCCGCCTCCGAGACCCGCCACTTCCAACCTGACCCAAACAACCACATCATCAGCAACCACAATAATAACAACCCGATATTCAACTCGGACATTTCGGTACCCGCCAAGGCGCGGAGTAAACGGTCCCGGGCAGCCCCGTGCAACTGGACTTCCCGCCTCCTCCTTCTCACGCCTAAAGAATCCTCTCCGGAGTCGTCCGACGTCGTCATTTCGGAACCGCCGTCGCTGCCTCCGGTGGCGTCTAGTGTCGGCAAGAAGACACTAAAGGCCGCGCCAAAGAAGAAGGAGAATCCAGAAGGCGGCGCCGCCGTGCCCGGGGACGGCCGCAAGTGTCTGCATTGCTCAACGGATAAGACTCCGCAGTGGCGGACCGGGCCCATGGGCCCGAAGACGCTCTGCAACGCCTGCGGAGTCAGGTATAAGTCGGGCCGGCTCGTGCCTGAGTACAGGCCCGCGGCCAGCCCGACTTTTGTGCTAACGAAGCACTCCAACTCGCACCGTAAGGTGCTGGAGCTGCGGCGGCAGAAAGAGATGGTGAGAGCTCAGCACCAGTACATTCATTACCAGCCACCGCCGCACCACCATCACCACCACCACCACCATAATCCCAACATGATTTTCGACGTTAATGGCGGTGATTACTTAATTCACCAACACGTGGGGCCCGATTTCAGGCAGCTGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905177 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GATA

Protein Analysis

384

Amino Acids

42.38

Weight (kDa)

6.28

Isoelectric Point (pI)

51.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATA	PF00320	267 - 301	6.5e-15	GATA zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32890 AT5G25830
fragaria_vesca	FvH4_2g35450 FvH4_6g32190
malus_domestica	MD08G1113200.v1.1 MD09G1205600.v1.1 MD15G1092500.v1.1 MD17G1185900.v1.1
prunus_persica	Prupe.1G447300_v2.0.a1 Prupe.1G447400_v2.0.a1 Prupe.3G060900_v2.0.a1
pyrus_communis	pycom08g09390 pycom17g19520
rosa_chinensis	RchiOBHm_Chr2g0140091
rosa_laevigata	RLG00000010798 RLG00000019848
rosa_multiflora	Rmu_co8403039.1_g000001 Rmu_sc0002971.1_g000022 Rmu_sc0003244.1_g000030
rosa_roxburghii	Rroxscaffold_2G00105070 Rroxscaffold_7G00161780
rosa_rugosa	Rorug02G0361000.1 Rorug06G0349300
rosa_samantha	Rh2AG411700 Rh2BG422000 Rh2CG397800 Rh2DG431400 Rh6AG461600 Rh6BG439500 Rh6CG475600 Rh6DG462400
rosa_wichuraiana	Rw2G033730 Rw6G040230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	155
AatII	GACGTC	1 cut(s)	672
Acc65I	GGTACC	1 cut(s)	565
AccB1I	GGYRCC	4 cut(s)	7, 95, 565, 770
AccB7I	CCANNNNNTGG	1 cut(s)	1126
AccII	CGCG	3 cut(s)	580, 740, 923
AccIII	TCCGGA	2 cut(s)	443, 655
AcoI	YGGCCR	3 cut(s)	279, 790, 924
AcsI	RAATTY	1 cut(s)	310
AcvI	CACGTG	1 cut(s)	1126
AcyI	GRCGYC	4 cut(s)	96, 669, 707, 771
AfaI	GTAC	4 cut(s)	353, 567, 914, 1022
AfiI	CCNNNNNNNGG	6 cut(s)	579, 767, 783, 788, 1126, 1140
AflIII	ACRYGT	1 cut(s)	1123
AgsI	TTSAA	2 cut(s)	316, 550
AjuI	GAANNNNNNNTTGG	2 cut(s)	1070, 1102
Alw21I	GWGCWC	2 cut(s)	372, 1012
Alw26I	GTCTC	1 cut(s)	473
AlwNI	CAGNNNCTG	3 cut(s)	33, 246, 430
Ama87I	CYCGRG	3 cut(s)	385, 594, 782
Aor13HI	TCCGGA	2 cut(s)	443, 655
ApaI	GGGCCC	3 cut(s)	846, 854, 1134
ApoI	RAATTY	1 cut(s)	310
Asp700I	GAANNNNTTC	2 cut(s)	18, 29
Asp718I	GGTACC	1 cut(s)	565
AspLEI	GCGC	4 cut(s)	98, 580, 742, 773
AsuC2I	CCSGG	5 cut(s)	595, 596, 783, 784, 841
AsuHPI	GGTGA	6 cut(s)	190, 220, 1015, 1046, 1109, 1115
AvaI	CYCGRG	3 cut(s)	385, 594, 782
AvaII	GGWCC	4 cut(s)	127, 418, 591, 837
BaeGI	GKGCMC	4 cut(s)	783, 846, 854, 1134
BanI	GGYRCC	4 cut(s)	7, 95, 565, 770
BanII	GRGCYC	5 cut(s)	372, 846, 854, 1012, 1134
BauI	CACGAG	1 cut(s)	902
BbrPI	CACGTG	1 cut(s)	1126
BbsI	GAAGAC	2 cut(s)	731, 863
Bbv12I	GWGCWC	2 cut(s)	372, 1012
BccI	CCATC	2 cut(s)	994, 1059
BceAI	ACGGC	3 cut(s)	673, 761, 805
BcgI	CGANNNNNNTGC	4 cut(s)	155, 189, 922, 956
BcnI	CCSGG	5 cut(s)	595, 596, 783, 784, 841
BcoDI	GTCTC	1 cut(s)	473
BfaI	CTAG	2 cut(s)	711, 1153
BfmI	CTRYAG	1 cut(s)	431
BfoI	RGCGCY	2 cut(s)	99, 774
BlpI	GCTNAGC	2 cut(s)	366, 1011
Bme1390I	CCNGG	5 cut(s)	595, 596, 783, 784, 841
Bme18I	GGWCC	4 cut(s)	127, 418, 591, 837
BmeT110I	CYCGRG	3 cut(s)	385, 594, 782
BmrFI	CCNGG	5 cut(s)	595, 596, 783, 784, 841
BpiI	GAAGAC	2 cut(s)	731, 863
BplI	GAGNNNNNCTC	2 cut(s)	458, 490
BpmI	CTGGAG	3 cut(s)	316, 407, 998
Bpu1102I	GCTNAGC	2 cut(s)	366, 1011
BpuMI	CCSGG	5 cut(s)	595, 596, 783, 784, 841
BsaAI	YACGTR	1 cut(s)	1126
BsaHI	GRCGYC	4 cut(s)	96, 669, 707, 771
BsaI	GGTCTC	1 cut(s)	473
BsaJI	CCNNGG	7 cut(s)	81, 573, 594, 782, 783, 846, 921
BsaWI	WCCGGW	4 cut(s)	200, 443, 655, 700
BsaXI	ACNNNNNCTCC	2 cut(s)	389, 419
Bsc4I	CCNNNNNNNGG	6 cut(s)	579, 767, 783, 788, 1126, 1140
Bse118I	RCCGGY	3 cut(s)	98, 277, 897
Bse1I	ACTGG	3 cut(s)	333, 617, 1018
Bse3DI	GCAATG	1 cut(s)	805
BseAI	TCCGGA	2 cut(s)	443, 655
BseDI	CCNNGG	7 cut(s)	81, 573, 594, 782, 783, 846, 921
BseLI	CCNNNNNNNGG	6 cut(s)	579, 767, 783, 788, 1126, 1140
BseMI	GCAATG	1 cut(s)	805
BseMII	CTCAG	3 cut(s)	357, 900, 1025
BseNI	ACTGG	3 cut(s)	333, 617, 1018
BseRI	GAGGAG	3 cut(s)	208, 413, 617
BseSI	GKGCMC	4 cut(s)	783, 846, 854, 1134
BseX3I	CGGCCG	1 cut(s)	790
BsgI	GTGCAG	1 cut(s)	123
Bsh1236I	CGCG	3 cut(s)	580, 740, 923
Bsh1285I	CGRYCG	1 cut(s)	793
BshNI	GGYRCC	4 cut(s)	7, 95, 565, 770
BsiEI	CGRYCG	1 cut(s)	793
BsiHKAI	GWGCWC	2 cut(s)	372, 1012
BsiHKCI	CYCGRG	3 cut(s)	385, 594, 782
BsiWI	CGTACG	1 cut(s)	351
BslFI	GGGAC	3 cut(s)	308, 577, 800
BslI	CCNNNNNNNGG	6 cut(s)	579, 767, 783, 788, 1126, 1140
BsmAI	GTCTC	1 cut(s)	473
BsmFI	GGGAC	3 cut(s)	308, 577, 800
Bso31I	GGTCTC	1 cut(s)	473
BsoBI	CYCGRG	3 cut(s)	385, 594, 782
Bsp120I	GGGCCC	3 cut(s)	842, 850, 1130
Bsp1286I	GDGCHC	6 cut(s)	372, 783, 846, 854, 1012, 1134
Bsp13I	TCCGGA	2 cut(s)	443, 655
Bsp143I	GATC	1 cut(s)	1149
Bsp1720I	GCTNAGC	2 cut(s)	366, 1011
Bsp19I	CCATGG	1 cut(s)	846
BspCNI	CTCAG	3 cut(s)	358, 901, 1024
BspEI	TCCGGA	2 cut(s)	443, 655
BspFNI	CGCG	3 cut(s)	580, 740, 923
BspMAI	CTGCAG	1 cut(s)	435
BspT107I	GGYRCC	4 cut(s)	7, 95, 565, 770
BspTNI	GGTCTC	1 cut(s)	473
BsrDI	GCAATG	1 cut(s)	805
BsrFI	RCCGGY	3 cut(s)	98, 277, 897
BsrI	ACTGG	3 cut(s)	333, 617, 1018
BssAI	RCCGGY	3 cut(s)	98, 277, 897
BssECI	CCNNGG	7 cut(s)	81, 573, 594, 782, 783, 846, 921
BssMI	GATC	1 cut(s)	1149
BssNI	GRCGYC	4 cut(s)	96, 669, 707, 771
BssSI	CACGAG	1 cut(s)	902
BssT1I	CCWWGG	3 cut(s)	81, 573, 846
Bst2BI	CACGAG	1 cut(s)	902
Bst4CI	ACNGT	4 cut(s)	113, 232, 591, 968
BstACI	GRCGYC	4 cut(s)	96, 669, 707, 771
BstAPI	GCANNNNNTGC	1 cut(s)	873
BstBAI	YACGTR	1 cut(s)	1126
BstC8I	GCNNGC	5 cut(s)	106, 874, 899, 921, 928
BstDEI	CTNAG	3 cut(s)	366, 909, 1011
BstDSI	CCRYGG	2 cut(s)	846, 921
BstFNI	CGCG	3 cut(s)	580, 740, 923
BstH2I	RGCGCY	2 cut(s)	99, 774
BstHHI	GCGC	4 cut(s)	98, 580, 742, 773
BstKTI	GATC	1 cut(s)	1152
BstMAI	GTCTC	1 cut(s)	473
BstMBI	GATC	1 cut(s)	1149
BstMCI	CGRYCG	1 cut(s)	793
BstSCI	CCNGG	5 cut(s)	593, 594, 781, 782, 839
BstSFI	CTRYAG	1 cut(s)	431
BstSLI	GKGCMC	4 cut(s)	783, 846, 854, 1134
BstUI	CGCG	3 cut(s)	580, 740, 923
BstV2I	GAAGAC	2 cut(s)	731, 863
BstZI	CGGCCG	1 cut(s)	790
BtgI	CCRYGG	2 cut(s)	846, 921
BtsI	GCAGTG	1 cut(s)	836
BtsIMutI	CAGTG	2 cut(s)	340, 836
Cac8I	GCNNGC	5 cut(s)	106, 874, 899, 921, 928
CaiI	CAGNNNCTG	3 cut(s)	33, 246, 430
CfoI	GCGC	4 cut(s)	98, 580, 742, 773
Cfr10I	RCCGGY	3 cut(s)	98, 277, 897
Cfr42I	CCGCGG	1 cut(s)	924
Cfr9I	CCCGGG	2 cut(s)	594, 782
CpoI	CGGWCCG	1 cut(s)	837
CseI	GACGC	4 cut(s)	161, 176, 696, 868
Csp6I	GTAC	4 cut(s)	352, 566, 913, 1021
CspI	CGGWCCG	1 cut(s)	837
CviAII	CATG	3 cut(s)	118, 847, 1081
CviQI	GTAC	4 cut(s)	352, 566, 913, 1021
DdeI	CTNAG	3 cut(s)	366, 909, 1011
DinI	GGCGCC	2 cut(s)	97, 772
DpnI	GATC	1 cut(s)	1151
DpnII	GATC	1 cut(s)	1149
DrdI	GACNNNNNNGTC	1 cut(s)	155
DseDI	GACNNNNNNGTC	1 cut(s)	155
EaeI	YGGCCR	3 cut(s)	279, 790, 924
EagI	CGGCCG	1 cut(s)	790
EciI	GGCGGA	1 cut(s)	850
Ecl136II	GAGCTC	2 cut(s)	370, 1010
EclXI	CGGCCG	1 cut(s)	790
Eco130I	CCWWGG	3 cut(s)	81, 573, 846
Eco24I	GRGCYC	5 cut(s)	372, 846, 854, 1012, 1134
Eco31I	GGTCTC	1 cut(s)	473
Eco47I	GGWCC	4 cut(s)	127, 418, 591, 837
Eco52I	CGGCCG	1 cut(s)	790
Eco53kI	GAGCTC	2 cut(s)	370, 1010
Eco72I	CACGTG	1 cut(s)	1126
Eco88I	CYCGRG	3 cut(s)	385, 594, 782
EcoICRI	GAGCTC	2 cut(s)	370, 1010
EcoO109I	RGGNCCY	3 cut(s)	127, 418, 1130
EcoT14I	CCWWGG	3 cut(s)	81, 573, 846
EcoT38I	GRGCYC	5 cut(s)	372, 846, 854, 1012, 1134
EgeI	GGCGCC	2 cut(s)	97, 772
EheI	GGCGCC	2 cut(s)	97, 772
ErhI	CCWWGG	3 cut(s)	81, 573, 846
FaeI	CATG	3 cut(s)	121, 850, 1084
FaiI	YATR	6 cut(s)	119, 440, 848, 888, 1071, 1082
FaqI	GGGAC	3 cut(s)	308, 577, 800
FatI	CATG	3 cut(s)	117, 846, 1080
FauI	CCCGC	5 cut(s)	298, 491, 577, 629, 928
FriOI	GRGCYC	5 cut(s)	372, 846, 854, 1012, 1134
FspBI	CTAG	2 cut(s)	711, 1153
GlaI	GCGC	4 cut(s)	97, 579, 741, 772
GsuI	CTGGAG	3 cut(s)	316, 407, 998
HaeII	RGCGCY	2 cut(s)	99, 774
HgaI	GACGC	4 cut(s)	161, 176, 696, 868
HhaI	GCGC	4 cut(s)	98, 580, 742, 773
Hin1I	GRCGYC	4 cut(s)	96, 669, 707, 771
Hin1II	CATG	3 cut(s)	121, 850, 1084
Hin6I	GCGC	4 cut(s)	96, 578, 740, 771
HinP1I	GCGC	4 cut(s)	96, 578, 740, 771
HinfI	GANTC	7 cut(s)	215, 401, 647, 659, 757, 823, 879
HphI	GGTGA	6 cut(s)	190, 220, 1015, 1046, 1109, 1115
Hpy166II	GTNNAC	1 cut(s)	587
Hpy188I	TCNGA	7 cut(s)	24, 302, 397, 478, 556, 667, 682
Hpy188III	TCNNGA	6 cut(s)	134, 385, 424, 444, 656, 761
Hpy8I	GTNNAC	1 cut(s)	587
HpyAV	CCTTC	5 cut(s)	140, 337, 641, 745, 758
HpyCH4III	ACNGT	4 cut(s)	113, 232, 591, 968
HpyCH4IV	ACGT	4 cut(s)	195, 669, 1092, 1125
HpyCH4V	TGCA	6 cut(s)	104, 249, 433, 609, 805, 867
HpyF3I	CTNAG	3 cut(s)	366, 909, 1011
HpySE526I	ACGT	4 cut(s)	195, 669, 1092, 1125
Hsp92I	GRCGYC	4 cut(s)	96, 669, 707, 771
Hsp92II	CATG	3 cut(s)	121, 850, 1084
HspAI	GCGC	4 cut(s)	96, 578, 740, 771
KasI	GGCGCC	2 cut(s)	95, 770
Kpn2I	TCCGGA	2 cut(s)	443, 655
KpnI	GGTACC	1 cut(s)	569
KroI	GCCGGC	1 cut(s)	897
KroNI	GCCGGC	1 cut(s)	899
KspI	CCGCGG	1 cut(s)	924
Kzo9I	GATC	1 cut(s)	1149
LmnI	GCTCC	1 cut(s)	979
MaeI	CTAG	2 cut(s)	711, 1153
MaeII	ACGT	4 cut(s)	195, 669, 1092, 1125
MaeIII	GTNAC	3 cut(s)	46, 196, 335
MalI	GATC	1 cut(s)	1151
MboI	GATC	1 cut(s)	1149
MboII	GAAGA	4 cut(s)	246, 736, 760, 868
MhlI	GDGCHC	6 cut(s)	372, 783, 846, 854, 1012, 1134
MluCI	AATT	5 cut(s)	41, 250, 283, 310, 1113
Mly113I	GGCGCC	2 cut(s)	96, 771
MlyI	GAGTC	5 cut(s)	209, 410, 668, 817, 888
MmeI	TCCRAC	3 cut(s)	517, 690, 981
MroI	TCCGGA	2 cut(s)	443, 655
MroNI	GCCGGC	1 cut(s)	897
MroXI	GAANNNNTTC	2 cut(s)	18, 29
MseI	TTAA	2 cut(s)	1095, 1112
MspA1I	CMGCKG	3 cut(s)	246, 923, 1147
MspR9I	CCNGG	5 cut(s)	595, 596, 783, 784, 841
MvnI	CGCG	3 cut(s)	580, 740, 923
NaeI	GCCGGC	1 cut(s)	899
NarI	GGCGCC	2 cut(s)	96, 771
NciI	CCSGG	5 cut(s)	595, 596, 783, 784, 841
NcoI	CCATGG	1 cut(s)	846
NdeII	GATC	1 cut(s)	1149
NgoMIV	GCCGGC	1 cut(s)	897
NlaIII	CATG	3 cut(s)	121, 850, 1084
NmuCI	GTSAC	2 cut(s)	196, 335
PaeR7I	CTCGAG	1 cut(s)	385
PcsI	WCGNNNNNNNCGW	3 cut(s)	401, 686, 1131
PdiI	GCCGGC	1 cut(s)	899
PdmI	GAANNNNTTC	2 cut(s)	18, 29
PfeI	GAWTC	2 cut(s)	647, 757
Pfl23II	CGTACG	1 cut(s)	351
PflFI	GACNNNGTC	2 cut(s)	155, 671
PflMI	CCANNNNNTGG	1 cut(s)	1126
PleI	GAGTC	5 cut(s)	209, 409, 667, 817, 887
PluTI	GGCGCC	2 cut(s)	99, 774
PmaCI	CACGTG	1 cut(s)	1126
PmlI	CACGTG	1 cut(s)	1126
PpsI	GAGTC	5 cut(s)	209, 409, 667, 817, 887
Ppu21I	YACGTR	1 cut(s)	1126
PpuMI	RGGWCCY	2 cut(s)	127, 418
Psp124BI	GAGCTC	2 cut(s)	372, 1012
Psp5II	RGGWCCY	2 cut(s)	127, 418
PspCI	CACGTG	1 cut(s)	1126
PspLI	CGTACG	1 cut(s)	351
PspOMI	GGGCCC	3 cut(s)	842, 850, 1130
PspPPI	RGGWCCY	2 cut(s)	127, 418
PstI	CTGCAG	1 cut(s)	435
PstNI	CAGNNNCTG	3 cut(s)	33, 246, 430
PsyI	GACNNNGTC	2 cut(s)	155, 671
PvuII	CAGCTG	2 cut(s)	246, 1147
RsaI	GTAC	4 cut(s)	353, 567, 914, 1022
RsaNI	GTAC	4 cut(s)	352, 566, 913, 1021
Rsr2I	CGGWCCG	1 cut(s)	837
RsrII	CGGWCCG	1 cut(s)	837
SacI	GAGCTC	2 cut(s)	372, 1012
SacII	CCGCGG	1 cut(s)	924
SaqAI	TTAA	2 cut(s)	1095, 1112
Sau3AI	GATC	1 cut(s)	1149
SchI	GAGTC	5 cut(s)	209, 410, 668, 817, 888
ScrFI	CCNGG	5 cut(s)	595, 596, 783, 784, 841
SduI	GDGCHC	6 cut(s)	372, 783, 846, 854, 1012, 1134
SfcI	CTRYAG	1 cut(s)	431
SfoI	GGCGCC	2 cut(s)	97, 772
Sfr274I	CTCGAG	1 cut(s)	385
Sfr303I	CCGCGG	1 cut(s)	924
SgrAI	CRCCGGYG	1 cut(s)	98
SgrBI	CCGCGG	1 cut(s)	924
SinI	GGWCC	4 cut(s)	127, 418, 591, 837
SlaI	CTCGAG	1 cut(s)	385
SmaI	CCCGGG	2 cut(s)	596, 784
SmlI	CTYRAG	1 cut(s)	385
SmoI	CTYRAG	1 cut(s)	385
Sse9I	AATT	5 cut(s)	41, 250, 283, 310, 1113
SspDI	GGCGCC	2 cut(s)	95, 770
SspI	AATATT	1 cut(s)	17
SspMI	CTAG	2 cut(s)	711, 1153
SstI	GAGCTC	2 cut(s)	372, 1012
StyD4I	CCNGG	5 cut(s)	593, 594, 781, 782, 839
StyI	CCWWGG	3 cut(s)	81, 573, 846
TaaI	ACNGT	4 cut(s)	113, 232, 591, 968
TaiI	ACGT	4 cut(s)	198, 672, 1095, 1128
TaqI	TCGA	5 cut(s)	72, 237, 372, 386, 1089
TasI	AATT	5 cut(s)	41, 250, 283, 310, 1113
TatI	WGTACW	2 cut(s)	912, 1020
TauI	GCSGC	9 cut(s)	473, 740, 771, 776, 795, 926, 988, 991, 1045
TfiI	GAWTC	2 cut(s)	647, 757
Tru1I	TTAA	2 cut(s)	1095, 1112
Tru9I	TTAA	2 cut(s)	1095, 1112
TscAI	CASTG	2 cut(s)	340, 836
TseFI	GTSAC	2 cut(s)	196, 335
Tsp45I	GTSAC	2 cut(s)	196, 335
TspDTI	ATGAA	3 cut(s)	106, 464, 1016
TspGWI	ACGGA	2 cut(s)	339, 830
TspMI	CCCGGG	2 cut(s)	594, 782
TspRI	CASTG	2 cut(s)	340, 836
Tth111I	GACNNNGTC	2 cut(s)	155, 671
Van91I	CCANNNNNTGG	1 cut(s)	1126
VpaK11BI	GGWCC	4 cut(s)	127, 418, 591, 837
XapI	RAATTY	1 cut(s)	310
XhoI	CTCGAG	1 cut(s)	385
XmaI	CCCGGG	2 cut(s)	594, 782
XmnI	GAANNNNTTC	2 cut(s)	18, 29
XspI	CTAG	2 cut(s)	711, 1153
ZraI	GACGTC	1 cut(s)	670

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.