Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0004079

Physical Location & Seq

Genomic Coordinates Reverse (-)

64085444 .. 64087157

Gene Structure 1714 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G040230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1143 bp

ATGGAGGCACCCGAATATTTTCAGAACAGCTTCTGCCCACAATTCGTAACCGAAAAGCAGCGACACTCTTTCGACAACACCAAGGCCAACAATGGCGCCGGTGCAGGCGACGGTTTCATGGTGGAGGACCTTCTGGACTTTTCTAACGACGACGCTGTCATTACCGACGCTGCTGCTGCTTTTGATAACGTCACCGGAAACTCCACCGACTCCTCCACCCTCACCGTCATCGACAGCAGCTGCAATTCTTCCTCTCTATCCGGCTGCGAACCAGTCAATTTCCCCGCCGATTTCGGAAGCCGGAATTTCAACGAAGTCCCCTTCTCCAGTGACCTCTGCGTTCCGTACGACGATTTAGCTGAGCTCGAATGGCAGCTCTCAAGTTTCTCGGAGGAGTCGTTTTCCAGCGAGGACCTCCAGAAGCTGCAGCTCATTTCCGGAATGAAAGCCCGACCCGACGAGGCCGCCTCCGAGACCCGCCACTTCCAACCTGACCCAAACAACCACAGCATCGGCAACCACAATAATAACAACCCGATATTCAACTCGGACATTTCGGTACCCGCCAAGGCGCGGAGTAAACGGTCCCGTGCCGCCCCGTGCAACTGGACTTCCCGCCTCCTCCTTCTCACGCCTAAAGAATCCTCTCCGGAGTCGTCCGACGTCGTCATTTCGGAACCGCCGTCCCTGCCTCCGGTGGCGTCTAGTGTCGGCAAGAAGACACTAAAGGCCGCGCCGAAGAAGAAGGAGAATCCAGAAGGCTGCGCCGCCGTGCCCGGGGACGGCCGGAAGTGTCTGCATTGCTCAACGGAAAAGACTCCGCAGTGGCGGACCGGGCCCATGGGCCCGAAGACGCTCTGCAACGCCTGCGGAGTCAGGTATAAGTCGGGCCGGCTCGTGCCTGAGTACAGGCCCGCGGCAAGCCCGACTTTCGTGCTAACAAAGCACTCCAACTCGCACCGTAAGGTGCTGGAGCTGCGGCGGCAGAAAGAGATGGTGAGAGCTCAGCACCAGTACATTCATCACCAGCCACCACCGCACCACCACCACCACCACCATAATCCCAACATGATTTTCGACGTTAATGGCGGTGATTACTTGATTCACCAACACGTGGGGCCCGATTTCAGGCAGCTGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000981 GO:0001012 GO:0001067 GO:0001085 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007623 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048511 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905177 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GATA

Protein Analysis

380

Amino Acids

41.95

Weight (kDa)

6.25

Isoelectric Point (pI)

50.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATA	PF00320	265 - 299	1.7e-14	GATA zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32890 AT5G25830
fragaria_vesca	FvH4_2g35450 FvH4_6g32190
malus_domestica	MD08G1113200.v1.1 MD09G1205600.v1.1 MD15G1092500.v1.1 MD17G1185900.v1.1
prunus_persica	Prupe.1G447300_v2.0.a1 Prupe.1G447400_v2.0.a1 Prupe.3G060900_v2.0.a1
pyrus_communis	pycom08g09390 pycom17g19520
rosa_chinensis	RchiOBHm_Chr2g0140091
rosa_laevigata	RLG00000010798 RLG00000019848
rosa_multiflora	Rmu_co8403039.1_g000001 Rmu_sc0002971.1_g000022 Rmu_sc0003244.1_g000030
rosa_roxburghii	Rroxscaffold_2G00105070 Rroxscaffold_7G00161780
rosa_rugosa	Rorug02G0361000.1 Rorug06G0349300
rosa_samantha	Rh2AG411700 Rh2BG422000 Rh2CG397800 Rh2DG431400 Rh6AG461600 Rh6BG439500 Rh6CG475600 Rh6DG462400
rosa_wichuraiana	Rw2G033730 Rw6G040230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	155
AatII	GACGTC	1 cut(s)	666
Acc65I	GGTACC	1 cut(s)	559
AccB1I	GGYRCC	3 cut(s)	7, 95, 559
AccB7I	CCANNNNNTGG	1 cut(s)	1114
AccII	CGCG	3 cut(s)	574, 734, 917
AccIII	TCCGGA	2 cut(s)	437, 649
AcoI	YGGCCR	1 cut(s)	784
AcsI	RAATTY	1 cut(s)	304
AcvI	CACGTG	1 cut(s)	1114
AcyI	GRCGYC	3 cut(s)	96, 663, 701
AfaI	GTAC	4 cut(s)	347, 561, 908, 1016
AfiI	CCNNNNNNNGG	6 cut(s)	573, 694, 777, 782, 1114, 1128
AflIII	ACRYGT	1 cut(s)	1111
AgsI	TTSAA	2 cut(s)	310, 544
AjuI	GAANNNNNNNTTGG	2 cut(s)	1058, 1090
Alw21I	GWGCWC	2 cut(s)	366, 1006
Alw26I	GTCTC	1 cut(s)	467
AlwNI	CAGNNNCTG	3 cut(s)	33, 240, 424
Ama87I	CYCGRG	1 cut(s)	776
Aor13HI	TCCGGA	2 cut(s)	437, 649
AoxI	GGCC	9 cut(s)	84, 462, 729, 784, 836, 844, 889, 911, 1118
ApaI	GGGCCC	3 cut(s)	840, 848, 1122
ApoI	RAATTY	1 cut(s)	304
Asp700I	GAANNNNTTC	2 cut(s)	18, 29
Asp718I	GGTACC	1 cut(s)	559
AspLEI	GCGC	4 cut(s)	98, 574, 736, 767
AsuC2I	CCSGG	3 cut(s)	777, 778, 835
AsuHPI	GGTGA	6 cut(s)	184, 214, 1009, 1016, 1097, 1103
AvaI	CYCGRG	1 cut(s)	776
AvaII	GGWCC	4 cut(s)	127, 412, 585, 831
BaeGI	GKGCMC	4 cut(s)	777, 840, 848, 1122
BanI	GGYRCC	3 cut(s)	7, 95, 559
BanII	GRGCYC	5 cut(s)	366, 840, 848, 1006, 1122
BauI	CACGAG	1 cut(s)	896
BbrPI	CACGTG	1 cut(s)	1114
BbsI	GAAGAC	2 cut(s)	725, 857
Bbv12I	GWGCWC	2 cut(s)	366, 1006
BccI	CCATC	1 cut(s)	988
BceAI	ACGGC	3 cut(s)	667, 755, 799
BcgI	CGANNNNNNTGC	4 cut(s)	155, 189, 916, 950
BcnI	CCSGG	3 cut(s)	777, 778, 835
BcoDI	GTCTC	1 cut(s)	467
BfaI	CTAG	2 cut(s)	705, 1141
BfmI	CTRYAG	1 cut(s)	425
BfoI	RGCGCY	1 cut(s)	99
BlpI	GCTNAGC	2 cut(s)	360, 1005
Bme1390I	CCNGG	3 cut(s)	777, 778, 835
Bme18I	GGWCC	4 cut(s)	127, 412, 585, 831
BmeT110I	CYCGRG	1 cut(s)	776
BmiI	GGNNCC	9 cut(s)	9, 97, 561, 587, 678, 838, 846, 1119, 1120
BmrFI	CCNGG	3 cut(s)	777, 778, 835
BmsI	GCATC	1 cut(s)	519
BpiI	GAAGAC	2 cut(s)	725, 857
BplI	GAGNNNNNCTC	2 cut(s)	452, 484
BpmI	CTGGAG	3 cut(s)	310, 401, 992
Bpu1102I	GCTNAGC	2 cut(s)	360, 1005
BpuEI	CTTGAG	1 cut(s)	364
BpuMI	CCSGG	3 cut(s)	777, 778, 835
BsaAI	YACGTR	1 cut(s)	1114
BsaHI	GRCGYC	3 cut(s)	96, 663, 701
BsaI	GGTCTC	1 cut(s)	467
BsaJI	CCNNGG	6 cut(s)	81, 567, 776, 777, 840, 915
BsaWI	WCCGGW	4 cut(s)	194, 437, 649, 694
BsaXI	ACNNNNNCTCC	2 cut(s)	383, 413
Bsc4I	CCNNNNNNNGG	6 cut(s)	573, 694, 777, 782, 1114, 1128
Bse118I	RCCGGY	2 cut(s)	98, 891
Bse1I	ACTGG	4 cut(s)	272, 327, 611, 1012
Bse3DI	GCAATG	1 cut(s)	799
BseAI	TCCGGA	2 cut(s)	437, 649
BseDI	CCNNGG	6 cut(s)	81, 567, 776, 777, 840, 915
BseLI	CCNNNNNNNGG	6 cut(s)	573, 694, 777, 782, 1114, 1128
BseMI	GCAATG	1 cut(s)	799
BseMII	CTCAG	3 cut(s)	351, 894, 1019
BseNI	ACTGG	4 cut(s)	272, 327, 611, 1012
BseRI	GAGGAG	3 cut(s)	202, 407, 611
BseSI	GKGCMC	4 cut(s)	777, 840, 848, 1122
BseX3I	CGGCCG	1 cut(s)	784
BsgI	GTGCAG	1 cut(s)	123
Bsh1236I	CGCG	3 cut(s)	574, 734, 917
Bsh1285I	CGRYCG	1 cut(s)	787
BshFI	GGCC	9 cut(s)	86, 464, 731, 786, 838, 846, 891, 913, 1120
BshNI	GGYRCC	3 cut(s)	7, 95, 559
BsiEI	CGRYCG	1 cut(s)	787
BsiHKAI	GWGCWC	2 cut(s)	366, 1006
BsiHKCI	CYCGRG	1 cut(s)	776
BsiWI	CGTACG	1 cut(s)	345
BslFI	GGGAC	4 cut(s)	302, 571, 670, 794
BslI	CCNNNNNNNGG	6 cut(s)	573, 694, 777, 782, 1114, 1128
BsmAI	GTCTC	1 cut(s)	467
BsmFI	GGGAC	4 cut(s)	302, 571, 670, 794
BsnI	GGCC	9 cut(s)	86, 464, 731, 786, 838, 846, 891, 913, 1120
Bso31I	GGTCTC	1 cut(s)	467
BsoBI	CYCGRG	1 cut(s)	776
Bsp120I	GGGCCC	3 cut(s)	836, 844, 1118
Bsp1286I	GDGCHC	6 cut(s)	366, 777, 840, 848, 1006, 1122
Bsp13I	TCCGGA	2 cut(s)	437, 649
Bsp143I	GATC	1 cut(s)	1137
Bsp1720I	GCTNAGC	2 cut(s)	360, 1005
Bsp19I	CCATGG	1 cut(s)	840
BspANI	GGCC	9 cut(s)	86, 464, 731, 786, 838, 846, 891, 913, 1120
BspCNI	CTCAG	3 cut(s)	352, 895, 1018
BspEI	TCCGGA	2 cut(s)	437, 649
BspFNI	CGCG	3 cut(s)	574, 734, 917
BspLI	GGNNCC	9 cut(s)	9, 97, 561, 587, 678, 838, 846, 1119, 1120
BspMAI	CTGCAG	1 cut(s)	429
BspT107I	GGYRCC	3 cut(s)	7, 95, 559
BspTNI	GGTCTC	1 cut(s)	467
BsrDI	GCAATG	1 cut(s)	799
BsrFI	RCCGGY	2 cut(s)	98, 891
BsrI	ACTGG	4 cut(s)	272, 327, 611, 1012
BssAI	RCCGGY	2 cut(s)	98, 891
BssECI	CCNNGG	6 cut(s)	81, 567, 776, 777, 840, 915
BssMI	GATC	1 cut(s)	1137
BssNI	GRCGYC	3 cut(s)	96, 663, 701
BssSI	CACGAG	1 cut(s)	896
BssT1I	CCWWGG	3 cut(s)	81, 567, 840
Bst2BI	CACGAG	1 cut(s)	896
Bst4CI	ACNGT	4 cut(s)	113, 226, 585, 962
BstACI	GRCGYC	3 cut(s)	96, 663, 701
BstAPI	GCANNNNNTGC	1 cut(s)	867
BstBAI	YACGTR	1 cut(s)	1114
BstC8I	GCNNGC	5 cut(s)	106, 868, 893, 915, 922
BstDEI	CTNAG	3 cut(s)	360, 903, 1005
BstDSI	CCRYGG	2 cut(s)	840, 915
BstFNI	CGCG	3 cut(s)	574, 734, 917
BstH2I	RGCGCY	1 cut(s)	99
BstHHI	GCGC	4 cut(s)	98, 574, 736, 767
BstKTI	GATC	1 cut(s)	1140
BstMAI	GTCTC	1 cut(s)	467
BstMBI	GATC	1 cut(s)	1137
BstMCI	CGRYCG	1 cut(s)	787
BstMWI	GCNNNNNNNGC	9 cut(s)	176, 370, 688, 835, 867, 943, 976, 982, 1036
BstSCI	CCNGG	3 cut(s)	775, 776, 833
BstSFI	CTRYAG	1 cut(s)	425
BstSLI	GKGCMC	4 cut(s)	777, 840, 848, 1122
BstUI	CGCG	3 cut(s)	574, 734, 917
BstV2I	GAAGAC	2 cut(s)	725, 857
BstZI	CGGCCG	1 cut(s)	784
BsuRI	GGCC	9 cut(s)	86, 464, 731, 786, 838, 846, 891, 913, 1120
BtgI	CCRYGG	2 cut(s)	840, 915
BtsI	GCAGTG	1 cut(s)	830
BtsIMutI	CAGTG	2 cut(s)	334, 830
Cac8I	GCNNGC	5 cut(s)	106, 868, 893, 915, 922
CaiI	CAGNNNCTG	3 cut(s)	33, 240, 424
CfoI	GCGC	4 cut(s)	98, 574, 736, 767
Cfr10I	RCCGGY	2 cut(s)	98, 891
Cfr42I	CCGCGG	1 cut(s)	918
Cfr9I	CCCGGG	1 cut(s)	776
CpoI	CGGWCCG	1 cut(s)	831
CseI	GACGC	4 cut(s)	161, 176, 690, 862
Csp6I	GTAC	4 cut(s)	346, 560, 907, 1015
CspI	CGGWCCG	1 cut(s)	831
CviAII	CATG	3 cut(s)	118, 841, 1069
CviQI	GTAC	4 cut(s)	346, 560, 907, 1015
DdeI	CTNAG	3 cut(s)	360, 903, 1005
DinI	GGCGCC	1 cut(s)	97
DpnI	GATC	1 cut(s)	1139
DpnII	GATC	1 cut(s)	1137
DrdI	GACNNNNNNGTC	1 cut(s)	155
DseDI	GACNNNNNNGTC	1 cut(s)	155
EaeI	YGGCCR	1 cut(s)	784
EagI	CGGCCG	1 cut(s)	784
EciI	GGCGGA	1 cut(s)	844
Ecl136II	GAGCTC	2 cut(s)	364, 1004
EclXI	CGGCCG	1 cut(s)	784
Eco130I	CCWWGG	3 cut(s)	81, 567, 840
Eco24I	GRGCYC	5 cut(s)	366, 840, 848, 1006, 1122
Eco31I	GGTCTC	1 cut(s)	467
Eco47I	GGWCC	4 cut(s)	127, 412, 585, 831
Eco52I	CGGCCG	1 cut(s)	784
Eco53kI	GAGCTC	2 cut(s)	364, 1004
Eco72I	CACGTG	1 cut(s)	1114
Eco88I	CYCGRG	1 cut(s)	776
EcoICRI	GAGCTC	2 cut(s)	364, 1004
EcoO109I	RGGNCCY	3 cut(s)	127, 412, 1118
EcoT14I	CCWWGG	3 cut(s)	81, 567, 840
EcoT38I	GRGCYC	5 cut(s)	366, 840, 848, 1006, 1122
EgeI	GGCGCC	1 cut(s)	97
EheI	GGCGCC	1 cut(s)	97
ErhI	CCWWGG	3 cut(s)	81, 567, 840
FaeI	CATG	3 cut(s)	121, 844, 1072
FaiI	YATR	5 cut(s)	119, 842, 882, 1059, 1070
FalI	AAGNNNNNCTT	2 cut(s)	913, 945
FaqI	GGGAC	4 cut(s)	302, 571, 670, 794
FatI	CATG	3 cut(s)	117, 840, 1068
FauI	CCCGC	5 cut(s)	292, 485, 571, 623, 922
FriOI	GRGCYC	5 cut(s)	366, 840, 848, 1006, 1122
FspBI	CTAG	2 cut(s)	705, 1141
GlaI	GCGC	4 cut(s)	97, 573, 735, 766
GsuI	CTGGAG	3 cut(s)	310, 401, 992
HaeII	RGCGCY	1 cut(s)	99
HaeIII	GGCC	9 cut(s)	86, 464, 731, 786, 838, 846, 891, 913, 1120
HgaI	GACGC	4 cut(s)	161, 176, 690, 862
HhaI	GCGC	4 cut(s)	98, 574, 736, 767
Hin1I	GRCGYC	3 cut(s)	96, 663, 701
Hin1II	CATG	3 cut(s)	121, 844, 1072
Hin6I	GCGC	4 cut(s)	96, 572, 734, 765
HinP1I	GCGC	4 cut(s)	96, 572, 734, 765
HinfI	GANTC	8 cut(s)	209, 395, 641, 653, 751, 817, 873, 1102
HphI	GGTGA	6 cut(s)	184, 214, 1009, 1016, 1097, 1103
Hpy166II	GTNNAC	1 cut(s)	581
Hpy188I	TCNGA	7 cut(s)	24, 296, 391, 472, 550, 661, 676
Hpy188III	TCNNGA	5 cut(s)	134, 418, 438, 650, 755
Hpy8I	GTNNAC	1 cut(s)	581
Hpy99I	CGWCG	9 cut(s)	113, 152, 155, 170, 353, 461, 665, 668, 1082
HpyAV	CCTTC	5 cut(s)	140, 331, 635, 739, 752
HpyCH4III	ACNGT	4 cut(s)	113, 226, 585, 962
HpyCH4IV	ACGT	4 cut(s)	189, 663, 1080, 1113
HpyCH4V	TGCA	6 cut(s)	104, 243, 427, 603, 799, 861
HpyF10VI	GCNNNNNNNGC	9 cut(s)	176, 370, 688, 835, 867, 943, 976, 982, 1036
HpyF3I	CTNAG	3 cut(s)	360, 903, 1005
HpySE526I	ACGT	4 cut(s)	189, 663, 1080, 1113
Hsp92I	GRCGYC	3 cut(s)	96, 663, 701
Hsp92II	CATG	3 cut(s)	121, 844, 1072
HspAI	GCGC	4 cut(s)	96, 572, 734, 765
KasI	GGCGCC	1 cut(s)	95
Kpn2I	TCCGGA	2 cut(s)	437, 649
KpnI	GGTACC	1 cut(s)	563
KroI	GCCGGC	1 cut(s)	891
KroNI	GCCGGC	1 cut(s)	893
KspI	CCGCGG	1 cut(s)	918
Kzo9I	GATC	1 cut(s)	1137
LmnI	GCTCC	1 cut(s)	973
LweI	GCATC	1 cut(s)	519
MaeI	CTAG	2 cut(s)	705, 1141
MaeII	ACGT	4 cut(s)	189, 663, 1080, 1113
MaeIII	GTNAC	3 cut(s)	46, 190, 329
MalI	GATC	1 cut(s)	1139
MboI	GATC	1 cut(s)	1137
MboII	GAAGA	5 cut(s)	240, 730, 751, 754, 862
MhlI	GDGCHC	6 cut(s)	366, 777, 840, 848, 1006, 1122
MluCI	AATT	4 cut(s)	41, 244, 277, 304
Mly113I	GGCGCC	1 cut(s)	96
MlyI	GAGTC	5 cut(s)	203, 404, 662, 811, 882
MmeI	TCCRAC	3 cut(s)	511, 684, 975
MroI	TCCGGA	2 cut(s)	437, 649
MroNI	GCCGGC	1 cut(s)	891
MroXI	GAANNNNTTC	2 cut(s)	18, 29
MseI	TTAA	1 cut(s)	1083
MspA1I	CMGCKG	3 cut(s)	240, 917, 1135
MspR9I	CCNGG	3 cut(s)	777, 778, 835
MvnI	CGCG	3 cut(s)	574, 734, 917
MwoI	GCNNNNNNNGC	9 cut(s)	176, 370, 688, 835, 867, 943, 976, 982, 1036
NaeI	GCCGGC	1 cut(s)	893
NarI	GGCGCC	1 cut(s)	96
NciI	CCSGG	3 cut(s)	777, 778, 835
NcoI	CCATGG	1 cut(s)	840
NdeII	GATC	1 cut(s)	1137
NgoMIV	GCCGGC	1 cut(s)	891
NlaIII	CATG	3 cut(s)	121, 844, 1072
NlaIV	GGNNCC	9 cut(s)	9, 97, 561, 587, 678, 838, 846, 1119, 1120
NmuCI	GTSAC	2 cut(s)	190, 329
PcsI	WCGNNNNNNNCGW	3 cut(s)	395, 680, 1119
PdiI	GCCGGC	1 cut(s)	893
PdmI	GAANNNNTTC	2 cut(s)	18, 29
PfeI	GAWTC	3 cut(s)	641, 751, 1102
Pfl23II	CGTACG	1 cut(s)	345
PflFI	GACNNNGTC	2 cut(s)	155, 665
PflMI	CCANNNNNTGG	1 cut(s)	1114
PleI	GAGTC	5 cut(s)	203, 403, 661, 811, 881
PluTI	GGCGCC	1 cut(s)	99
PmaCI	CACGTG	1 cut(s)	1114
PmlI	CACGTG	1 cut(s)	1114
PpsI	GAGTC	5 cut(s)	203, 403, 661, 811, 881
Ppu21I	YACGTR	1 cut(s)	1114
PpuMI	RGGWCCY	2 cut(s)	127, 412
Psp124BI	GAGCTC	2 cut(s)	366, 1006
Psp5II	RGGWCCY	2 cut(s)	127, 412
PspCI	CACGTG	1 cut(s)	1114
PspLI	CGTACG	1 cut(s)	345
PspN4I	GGNNCC	9 cut(s)	9, 97, 561, 587, 678, 838, 846, 1119, 1120
PspOMI	GGGCCC	3 cut(s)	836, 844, 1118
PspPPI	RGGWCCY	2 cut(s)	127, 412
PstI	CTGCAG	1 cut(s)	429
PstNI	CAGNNNCTG	3 cut(s)	33, 240, 424
PsyI	GACNNNGTC	2 cut(s)	155, 665
PvuII	CAGCTG	2 cut(s)	240, 1135
RsaI	GTAC	4 cut(s)	347, 561, 908, 1016
RsaNI	GTAC	4 cut(s)	346, 560, 907, 1015
Rsr2I	CGGWCCG	1 cut(s)	831
RsrII	CGGWCCG	1 cut(s)	831
SacI	GAGCTC	2 cut(s)	366, 1006
SacII	CCGCGG	1 cut(s)	918
SaqAI	TTAA	1 cut(s)	1083
Sau3AI	GATC	1 cut(s)	1137
SchI	GAGTC	5 cut(s)	203, 404, 662, 811, 882
ScrFI	CCNGG	3 cut(s)	777, 778, 835
SduI	GDGCHC	6 cut(s)	366, 777, 840, 848, 1006, 1122
SfaNI	GCATC	1 cut(s)	519
SfcI	CTRYAG	1 cut(s)	425
SfoI	GGCGCC	1 cut(s)	97
Sfr303I	CCGCGG	1 cut(s)	918
SgrAI	CRCCGGYG	1 cut(s)	98
SgrBI	CCGCGG	1 cut(s)	918
SinI	GGWCC	4 cut(s)	127, 412, 585, 831
SmaI	CCCGGG	1 cut(s)	778
SmlI	CTYRAG	1 cut(s)	379
SmoI	CTYRAG	1 cut(s)	379
Sse9I	AATT	4 cut(s)	41, 244, 277, 304
SspDI	GGCGCC	1 cut(s)	95
SspI	AATATT	1 cut(s)	17
SspMI	CTAG	2 cut(s)	705, 1141
SstI	GAGCTC	2 cut(s)	366, 1006
StyD4I	CCNGG	3 cut(s)	775, 776, 833
StyI	CCWWGG	3 cut(s)	81, 567, 840
TaaI	ACNGT	4 cut(s)	113, 226, 585, 962
TaiI	ACGT	4 cut(s)	192, 666, 1083, 1116
TaqI	TCGA	4 cut(s)	72, 231, 366, 1077
TasI	AATT	4 cut(s)	41, 244, 277, 304
TatI	WGTACW	2 cut(s)	906, 1014
TauI	GCSGC	7 cut(s)	467, 596, 734, 770, 920, 982, 985
TfiI	GAWTC	3 cut(s)	641, 751, 1102
Tru1I	TTAA	1 cut(s)	1083
Tru9I	TTAA	1 cut(s)	1083
TscAI	CASTG	2 cut(s)	334, 830
TseFI	GTSAC	2 cut(s)	190, 329
Tsp45I	GTSAC	2 cut(s)	190, 329
TspDTI	ATGAA	3 cut(s)	106, 458, 1010
TspGWI	ACGGA	2 cut(s)	333, 824
TspMI	CCCGGG	1 cut(s)	776
TspRI	CASTG	2 cut(s)	334, 830
Tth111I	GACNNNGTC	2 cut(s)	155, 665
Van91I	CCANNNNNTGG	1 cut(s)	1114
VpaK11BI	GGWCC	4 cut(s)	127, 412, 585, 831
XapI	RAATTY	1 cut(s)	304
XmaI	CCCGGG	1 cut(s)	776
XmnI	GAANNNNTTC	2 cut(s)	18, 29
XspI	CTAG	2 cut(s)	705, 1141
ZraI	GACGTC	1 cut(s)	664

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.