MD09G1055900.v1.1

Cytosolic domain of 10TM putative phosphate transporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
3704910 .. 3710875
5966 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1055900.v1.1.491

Sequence Viewer

Length: 2151 bp
ATGATCGTTTCGGCGCTTTTAACGTCGGTGGGAATCAATCTCGCCCTCTGTCTCTTGTTCTTCACTCTGTATTCAATACTCAGGAAGCAACCCAGCTACCTCAATGTCTATTCGCCGCGCTCGGTGGCGGCCAAGGAGGAGTTGGAGGAGAGCAACAAGTTCAATTTCGAGCGGCTGCTGCCGACGGCGGGTTGGGTGCGGAGGGCGTGGCAGCCCTCTGAGGACGAGCTTCTGTCAGTCACCAGCTTGGATGCTGTCGTCTTCATGCGCATTTTTATCTTCAGTTTGAGAGTGTTTGGGTTTGCTGGGATTGTTGGGATTCTGGTTCTGCTTCCGATAAATTATCTGGGGAACCAGCTGAATAGGGATTTTGATATTTCGAATTTGCCCAGCAAGTCTTTGGACTCCTTCAGCATTTCGAATGTGAATGTTGGCTCGAAATGGTTATGGGTTCACTTTTGTGCAGCATACATTTTCACTGGAGTCGTCTGCTATCTTCTTTATTATGAGTATAGCTTTATCTCATCGAAAAGAATTGCTCACTTCTATTCATCCAAACCTCAGCCTCATCAGTTTACAGTATTAGTTCGTGCTGTTCCAGTCTCATCTGGGAGCAGCTGTAGTGAAACTGTTGAGAATTTTTTTACGGAGTATTATCCTTCTACGTATCTTTCACATTCAGTGGTTCGTCGAACTAACAAACTCCAACGTCTCACTAGTGATGCGGGGAAGCTATACCGAAAGCTCGTGCGTCTGAGATCAGAAACTAATACTCAGCAAAGATTAAGGCGTGATGGCTCTTGGGGGCTATCTGGACGCAAAGTTGATGTTTTAGATCACTATGGAAAGAAATTGGATGATTTAGAAGATAATGTGAGAATGGAGCAATCGTCAGTGGCAGGAAAGGAAGTTGCAGCTGCTTTTGTGTCGTTCAAGTCTCGGCTTGGTGCTGCAGTAGCTTTACACATTCAACAAGGAGCAAATCCCACAGAATGGGTTACCGAGATGGCCCCGGAGCCCCAGGATGTTCACTGGCCCTTCTTTTCTGCATCTTTTATAAAAAGATGGATCTCCAAGCTGGTGGTAGTGGTTGCATATACTGCTCTTACAATTCTGTTCCTCATTCCAGTTGTAATTGTGCAAGGCCTTACTCATCTTGAGCAGTTGGAAACCTGGTTTCCGTTTCTGAAAAGCGTACTGGACCTAACAGTTGTCAGTGAAGTCATAACAGGATATCTTCCAAGTCTTATTCTCCAATTGTTCCTTTCTTTTGTGCCACCCGTCATGATAATGTTGTCTTCCATGGAAGGATACATCTCTTTCAGTCAGATACAAAAAAGTGCATGCAGCAAGATGTTGTGGTTCACAATATGGAATATATTCTTGGCAAATACACTTTCAGGAACAGTTCTCTATCGGTTCAATATCTTTCTGGAGCCCAAAAAGATTCCAGGGATACTTGCTGATGCTGTTCCAGCACAGGCATCATTCTTCATTGCATATGTTGTGACATCTGGATGGACCAGTCTTCTAGCCTCAGAACTCTTCCGCGTGAGTCCCCTGATTTGGAGTATCATAAAAAGACCATTTTCAGGAAAAGATGATGAATTTGAGGTTCCTTCAATTCCATACCATAGTGAAATTCCTCGAGTTCTCTTTTTTGAACTCCTCGGAATAACATACTTCTTCCTAGCTCCTCTAATCCTCCCGTTCCTCTTGGTTTACTGTTGTCTGGGATACATAATCTTCCGTAACCAGTTTCTGAATGTATATGCACCTAAGTATGAAACCGAAGGAAAATTTTGGCCAACAGTGCACAATTCAACAATTTTTGCCTTGGTGCTGATGCACATCATTGCAATTGGAATGTTTGGGCTCAAAAAGGTTCCCTTAGCTTCCAGTCTGACCATTCCTCTTCCGATTCTCACGCTTCTTTTCAATGAGTACTGCCGCAAACGATTCCTTCCAATATTCAAAGCCTATCCGGCTGAGTGTTTGATAAAGAAAGATAGAGAAGACGAGAACGATCGTAGAATCTCTACATTTTATGAAAAGTTAAGCACTGCTTACAGGGATCCAGCTCTGATGCCAATGCTGCATCCGCGAAGCACTGATGGACACAGCACTCCCCTTCTTCAAGCTGGAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

717

Amino Acids

81.44

Weight (kDa)

8.99

Isoelectric Point (pI)

45.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 5 - 170 1.7e-39 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 191 - 346 1.8e-36 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 359 - 624 6.7e-73 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1058
Acc16I TGCGCA 1 cut(s) 269
AccB7I CCANNNNNTGG 1 cut(s) 993
AccBSI CCGCTC 1 cut(s) 172
AccII CGCG 3 cut(s) 118, 1551, 2104
AciI CCGC 9 cut(s) 116, 128, 172, 188, 199, 725, 1549, 1951, 2102
AclWI GGATC 3 cut(s) 1076, 2069, 2082
AcoI YGGCCR 2 cut(s) 129, 1805
AcsI RAATTY 5 cut(s) 382, 637, 1607, 1641, 1799
AcuI CTGAAG 2 cut(s) 265, 394
AfaI GTAC 2 cut(s) 1197, 1946
AfiI CCNNNNNNNGG 4 cut(s) 188, 993, 1566, 1592
AhlI ACTAGT 1 cut(s) 716
AjnI CCWGG 3 cut(s) 1020, 1172, 1450
AjuI GAANNNNNNNTTGG 2 cut(s) 1367, 1399
AleI CACNNNNGTG 1 cut(s) 459
Alw21I GWGCWC 1 cut(s) 1818
Alw26I GTCTC 4 cut(s) 56, 607, 716, 942
Alw44I GTGCAC 1 cut(s) 1814
AlwI GGATC 3 cut(s) 1076, 2069, 2082
AlwNI CAGNNNCTG 1 cut(s) 1762
Ama87I CYCGRG 1 cut(s) 1647
AoxI GGCC 5 cut(s) 129, 1008, 1034, 1144, 1805
ApaLI GTGCAC 1 cut(s) 1814
ApoI RAATTY 5 cut(s) 382, 637, 1607, 1641, 1799
Asp700I GAANNNNTTC 1 cut(s) 1379
AspLEI GCGC 3 cut(s) 16, 120, 270
AspS9I GGNCC 4 cut(s) 1009, 1035, 1201, 1521
AsuC2I CCSGG 1 cut(s) 1013
AsuHPI GGTGA 1 cut(s) 232
AsuII TTCGAA 2 cut(s) 380, 419
AvaI CYCGRG 1 cut(s) 1647
AvaII GGWCC 2 cut(s) 1201, 1521
BaeGI GKGCMC 1 cut(s) 1818
BalI TGGCCA 1 cut(s) 1807
BamHI GGATCC 1 cut(s) 2074
BanII GRGCYC 3 cut(s) 1020, 1440, 1878
BauI CACGAG 1 cut(s) 746
BbsI GAAGAC 4 cut(s) 253, 1290, 1520, 2022
Bbv12I GWGCWC 1 cut(s) 1818
BbvCI CCTCAGC 1 cut(s) 561
BccI CCATC 5 cut(s) 788, 1000, 1059, 1512, 2108
BceAI ACGGC 1 cut(s) 201
BciT130I CCWGG 3 cut(s) 1022, 1174, 1452
BciVI GTATCC 3 cut(s) 1304, 1449, 1730
BcnI CCSGG 1 cut(s) 1013
BcoDI GTCTC 4 cut(s) 56, 607, 716, 942
BcuI ACTAGT 1 cut(s) 716
BfaI CTAG 3 cut(s) 717, 1532, 1691
BfmI CTRYAG 2 cut(s) 619, 951
BfoI RGCGCY 1 cut(s) 17
BfuI GTATCC 3 cut(s) 1304, 1449, 1730
BglI GCCNNNNNGGC 1 cut(s) 1985
BmcAI AGTACT 1 cut(s) 1946
Bme1390I CCNGG 4 cut(s) 1013, 1022, 1174, 1452
Bme18I GGWCC 2 cut(s) 1201, 1521
BmeT110I CYCGRG 1 cut(s) 1647
BmgT120I GGNCC 4 cut(s) 1009, 1035, 1201, 1521
BmiI GGNNCC 7 cut(s) 353, 1011, 1017, 1437, 1617, 1887, 2076
BmrFI CCNGG 4 cut(s) 1013, 1022, 1174, 1452
BmsI GCATC 8 cut(s) 241, 712, 1058, 1456, 1493, 1836, 2076, 2107
BpiI GAAGAC 4 cut(s) 253, 1290, 1520, 2022
BpmI CTGGAG 2 cut(s) 501, 1454
Bpu10I CCTNAGC 2 cut(s) 561, 1891
Bpu14I TTCGAA 2 cut(s) 380, 419
BpuEI CTTGAG 1 cut(s) 1178
BpuMI CCSGG 1 cut(s) 1013
BsaAI YACGTR 1 cut(s) 666
BsaBI GATNNNNATC 1 cut(s) 1850
BsaJI CCNNGG 7 cut(s) 132, 1011, 1020, 1302, 1451, 1669, 1836
BsaXI ACNNNNNCTCC 4 cut(s) 604, 634, 875, 905
Bsc4I CCNNNNNNNGG 4 cut(s) 188, 993, 1566, 1592
Bse1I ACTGG 8 cut(s) 484, 599, 1037, 1127, 1203, 1524, 1756, 1899
Bse3DI GCAATG 2 cut(s) 1494, 1854
Bse8I GATNNNNATC 1 cut(s) 1850
BseBI CCWGG 3 cut(s) 1022, 1174, 1452
BseDI CCNNGG 7 cut(s) 132, 1011, 1020, 1302, 1451, 1669, 1836
BseGI GGATG 6 cut(s) 256, 551, 862, 1030, 1523, 2098
BseJI GATNNNNATC 1 cut(s) 1850
BseLI CCNNNNNNNGG 4 cut(s) 188, 993, 1566, 1592
BseMI GCAATG 2 cut(s) 1494, 1854
BseMII CTCAG 7 cut(s) 94, 210, 575, 746, 788, 1551, 1980
BseNI ACTGG 8 cut(s) 484, 599, 1037, 1127, 1203, 1524, 1756, 1899
BseRI GAGGAG 4 cut(s) 152, 161, 1658, 1686
BseSI GKGCMC 1 cut(s) 1818
BseYI CCCAGC 3 cut(s) 92, 305, 389
BsgI GTGCAG 1 cut(s) 483
Bsh1236I CGCG 3 cut(s) 118, 1551, 2104
Bsh1285I CGRYCG 1 cut(s) 2029
BshFI GGCC 5 cut(s) 131, 1010, 1036, 1146, 1807
BsiEI CGRYCG 1 cut(s) 2029
BsiHKAI GWGCWC 1 cut(s) 1818
BsiHKCI CYCGRG 1 cut(s) 1647
BsiSI CCGG 2 cut(s) 1013, 1985
BslFI GGGAC 1 cut(s) 1542
BslI CCNNNNNNNGG 4 cut(s) 188, 993, 1566, 1592
BsmAI GTCTC 4 cut(s) 56, 607, 716, 942
BsmBI CGTCTC 1 cut(s) 716
BsmFI GGGAC 1 cut(s) 1542
BsnI GGCC 5 cut(s) 131, 1010, 1036, 1146, 1807
BsoBI CYCGRG 1 cut(s) 1647
Bsp119I TTCGAA 2 cut(s) 380, 419
Bsp1286I GDGCHC 4 cut(s) 1020, 1440, 1818, 1878
Bsp143I GATC 6 cut(s) 3, 758, 835, 1068, 2026, 2074
Bsp19I CCATGG 1 cut(s) 1302
BspACI CCGC 9 cut(s) 116, 128, 172, 188, 199, 725, 1549, 1951, 2102
BspANI GGCC 5 cut(s) 131, 1010, 1036, 1146, 1807
BspCNI CTCAG 7 cut(s) 93, 211, 574, 747, 787, 1550, 1981
BspFNI CGCG 3 cut(s) 118, 1551, 2104
BspHI TCATGA 1 cut(s) 1284
BspLI GGNNCC 7 cut(s) 353, 1011, 1017, 1437, 1617, 1887, 2076
BspMAI CTGCAG 1 cut(s) 955
BspPI GGATC 3 cut(s) 1076, 2069, 2082
BspT104I TTCGAA 2 cut(s) 380, 419
BsrBI CCGCTC 1 cut(s) 172
BsrDI GCAATG 2 cut(s) 1494, 1854
BsrI ACTGG 8 cut(s) 484, 599, 1037, 1127, 1203, 1524, 1756, 1899
BssECI CCNNGG 7 cut(s) 132, 1011, 1020, 1302, 1451, 1669, 1836
BssMI GATC 6 cut(s) 3, 758, 835, 1068, 2026, 2074
BssSI CACGAG 1 cut(s) 746
BssT1I CCWWGG 3 cut(s) 132, 1302, 1836
Bst2BI CACGAG 1 cut(s) 746
Bst2UI CCWGG 3 cut(s) 1022, 1174, 1452
Bst4CI ACNGT 6 cut(s) 580, 631, 1210, 1408, 1727, 1813
Bst6I CTCTTC 2 cut(s) 1550, 1920
BstAPI GCANNNNNTGC 1 cut(s) 1100
BstBAI YACGTR 1 cut(s) 666
BstBI TTCGAA 2 cut(s) 380, 419
BstC8I GCNNGC 1 cut(s) 1345
BstDEI CTNAG 9 cut(s) 80, 219, 561, 755, 774, 1537, 1779, 1891, 1989
BstDSI CCRYGG 1 cut(s) 1302
BstEII GGTNACC 1 cut(s) 997
BstF5I GGATG 6 cut(s) 256, 551, 862, 1030, 1523, 2098
BstFNI CGCG 3 cut(s) 118, 1551, 2104
BstH2I RGCGCY 1 cut(s) 17
BstHHI GCGC 3 cut(s) 16, 120, 270
BstKTI GATC 6 cut(s) 6, 761, 838, 1071, 2029, 2077
BstMAI GTCTC 4 cut(s) 56, 607, 716, 942
BstMBI GATC 6 cut(s) 3, 758, 835, 1068, 2026, 2074
BstMCI CGRYCG 1 cut(s) 2029
BstMWI GCNNNNNNNGC 8 cut(s) 178, 956, 1100, 1475, 1813, 1985, 2095, 2101
BstNI CCWGG 3 cut(s) 1022, 1174, 1452
BstNSI RCATGY 1 cut(s) 1347
BstPI GGTNACC 1 cut(s) 997
BstSCI CCNGG 4 cut(s) 1011, 1020, 1172, 1450
BstSFI CTRYAG 2 cut(s) 619, 951
BstSLI GKGCMC 1 cut(s) 1818
BstSNI TACGTA 1 cut(s) 666
BstUI CGCG 3 cut(s) 118, 1551, 2104
BstV2I GAAGAC 4 cut(s) 253, 1290, 1520, 2022
BstX2I RGATCY 2 cut(s) 1068, 2074
BstXI CCANNNNNNTGG 1 cut(s) 1081
BstYI RGATCY 2 cut(s) 1068, 2074
BsuI GTATCC 3 cut(s) 1304, 1449, 1730
BsuRI GGCC 5 cut(s) 131, 1010, 1036, 1146, 1807
BtgI CCRYGG 1 cut(s) 1302
BtsCI GGATG 6 cut(s) 256, 551, 862, 1030, 1523, 2098
BtsI GCAGTG 1 cut(s) 2061
BtsIMutI CAGTG 8 cut(s) 477, 687, 900, 1030, 1222, 1818, 2061, 2109
Cac8I GCNNGC 1 cut(s) 1345
CaiI CAGNNNCTG 1 cut(s) 1762
CciI TCATGA 1 cut(s) 1284
CfoI GCGC 3 cut(s) 16, 120, 270
Cfr13I GGNCC 4 cut(s) 1009, 1035, 1201, 1521
CseI GACGC 2 cut(s) 740, 825
CsiI ACCWGGT 1 cut(s) 1172
Csp6I GTAC 2 cut(s) 1196, 1945
CviAII CATG 4 cut(s) 265, 1285, 1303, 1344
CviQI GTAC 2 cut(s) 1196, 1945
DdeI CTNAG 9 cut(s) 80, 219, 561, 755, 774, 1537, 1779, 1891, 1989
DpnI GATC 6 cut(s) 5, 760, 837, 1070, 2028, 2076
DpnII GATC 6 cut(s) 3, 758, 835, 1068, 2026, 2074
EaeI YGGCCR 2 cut(s) 129, 1805
Eam1104I CTCTTC 2 cut(s) 1550, 1920
EarI CTCTTC 2 cut(s) 1550, 1920
Eco105I TACGTA 1 cut(s) 666
Eco130I CCWWGG 3 cut(s) 132, 1302, 1836
Eco147I AGGCCT 1 cut(s) 1146
Eco24I GRGCYC 3 cut(s) 1020, 1440, 1878
Eco32I GATATC 1 cut(s) 1235
Eco47I GGWCC 2 cut(s) 1201, 1521
Eco57I CTGAAG 2 cut(s) 265, 394
Eco88I CYCGRG 1 cut(s) 1647
Eco91I GGTNACC 1 cut(s) 997
EcoO65I GGTNACC 1 cut(s) 997
EcoRII CCWGG 3 cut(s) 1020, 1172, 1450
EcoRV GATATC 1 cut(s) 1235
EcoT14I CCWWGG 3 cut(s) 132, 1302, 1836
EcoT38I GRGCYC 3 cut(s) 1020, 1440, 1878
ErhI CCWWGG 3 cut(s) 132, 1302, 1836
Esp3I CGTCTC 1 cut(s) 716
FaeI CATG 4 cut(s) 268, 1288, 1306, 1347
FalI AAGNNNNNCTT 4 cut(s) 1874, 1906, 2050, 2082
FaqI GGGAC 1 cut(s) 1542
FatI CATG 4 cut(s) 264, 1284, 1302, 1343
FauI CCCGC 2 cut(s) 181, 718
FauNDI CATATG 1 cut(s) 1501
FokI GGATG 6 cut(s) 263, 538, 869, 1037, 1530, 2085
FriOI GRGCYC 3 cut(s) 1020, 1440, 1878
FspAI RTGCGCAY 1 cut(s) 269
FspBI CTAG 3 cut(s) 717, 1532, 1691
FspI TGCGCA 1 cut(s) 269
GlaI GCGC 3 cut(s) 15, 119, 269
GsaI CCCAGC 3 cut(s) 96, 309, 393
GsuI CTGGAG 2 cut(s) 501, 1454
HaeII RGCGCY 1 cut(s) 17
HaeIII GGCC 5 cut(s) 131, 1010, 1036, 1146, 1807
HapII CCGG 2 cut(s) 1013, 1985
HgaI GACGC 2 cut(s) 740, 825
HhaI GCGC 3 cut(s) 16, 120, 270
Hin1II CATG 4 cut(s) 268, 1288, 1306, 1347
Hin6I GCGC 3 cut(s) 14, 118, 268
HinP1I GCGC 3 cut(s) 14, 118, 268
HpaII CCGG 2 cut(s) 1013, 1985
HphI GGTGA 1 cut(s) 232
Hpy166II GTNNAC 6 cut(s) 454, 576, 1030, 1365, 1723, 1816
Hpy188III TCNNGA 8 cut(s) 82, 813, 1157, 1285, 1401, 1433, 1515, 1593
Hpy8I GTNNAC 6 cut(s) 454, 576, 1030, 1365, 1723, 1816
Hpy99I CGWCG 3 cut(s) 28, 187, 693
HpyAV CCTTC 8 cut(s) 418, 669, 1048, 1301, 1629, 1787, 1973, 2141
HpyCH4III ACNGT 6 cut(s) 580, 631, 1210, 1408, 1727, 1813
HpyCH4IV ACGT 3 cut(s) 23, 665, 709
HpyF10VI GCNNNNNNNGC 8 cut(s) 178, 956, 1100, 1475, 1813, 1985, 2095, 2101
HpyF3I CTNAG 9 cut(s) 80, 219, 561, 755, 774, 1537, 1779, 1891, 1989
HpySE526I ACGT 3 cut(s) 23, 665, 709
Hsp92II CATG 4 cut(s) 268, 1288, 1306, 1347
HspAI GCGC 3 cut(s) 14, 118, 268
Kzo9I GATC 6 cut(s) 3, 758, 835, 1068, 2026, 2074
LmnI GCTCC 6 cut(s) 612, 883, 977, 1015, 1435, 1699
LweI GCATC 8 cut(s) 241, 712, 1058, 1456, 1493, 1836, 2076, 2107
MabI ACCWGGT 1 cut(s) 1172
MaeI CTAG 3 cut(s) 717, 1532, 1691
MaeII ACGT 3 cut(s) 23, 665, 709
MaeIII GTNAC 4 cut(s) 238, 997, 1507, 1751
MalI GATC 6 cut(s) 5, 760, 837, 1070, 2028, 2076
MbiI CCGCTC 1 cut(s) 172
MboI GATC 6 cut(s) 3, 758, 835, 1068, 2026, 2074
MfeI CAATTG 2 cut(s) 1256, 1860
MflI RGATCY 2 cut(s) 1068, 2074
MhlI GDGCHC 4 cut(s) 1020, 1440, 1818, 1878
MlsI TGGCCA 1 cut(s) 1807
MluNI TGGCCA 1 cut(s) 1807
MlyI GAGTC 3 cut(s) 398, 492, 1564
MmeI TCCRAC 3 cut(s) 123, 730, 1146
Mox20I TGGCCA 1 cut(s) 1807
MroXI GAANNNNTTC 1 cut(s) 1379
MscI TGGCCA 1 cut(s) 1807
MseI TTAA 3 cut(s) 20, 785, 2057
MslI CAYNNNNRTG 3 cut(s) 459, 1289, 1516
Msp20I TGGCCA 1 cut(s) 1807
MspA1I CMGCKG 3 cut(s) 358, 618, 917
MspI CCGG 2 cut(s) 1013, 1985
MspR9I CCNGG 4 cut(s) 1013, 1022, 1174, 1452
MunI CAATTG 2 cut(s) 1256, 1860
MvaI CCWGG 3 cut(s) 1022, 1174, 1452
MvnI CGCG 3 cut(s) 118, 1551, 2104
MwoI GCNNNNNNNGC 8 cut(s) 178, 956, 1100, 1475, 1813, 1985, 2095, 2101
NciI CCSGG 1 cut(s) 1013
NcoI CCATGG 1 cut(s) 1302
NdeI CATATG 1 cut(s) 1501
NdeII GATC 6 cut(s) 3, 758, 835, 1068, 2026, 2074
NlaIII CATG 4 cut(s) 268, 1288, 1306, 1347
NlaIV GGNNCC 7 cut(s) 353, 1011, 1017, 1437, 1617, 1887, 2076
NmeAIII GCCGAG 1 cut(s) 919
NmuCI GTSAC 2 cut(s) 238, 1507
NsbI TGCGCA 1 cut(s) 269
NspI RCATGY 1 cut(s) 1347
NspV TTCGAA 2 cut(s) 380, 419
OliI CACNNNNGTG 1 cut(s) 459
PaeI GCATGC 1 cut(s) 1347
PaeR7I CTCGAG 1 cut(s) 1647
PagI TCATGA 1 cut(s) 1284
PceI AGGCCT 1 cut(s) 1146
PdmI GAANNNNTTC 1 cut(s) 1379
PfeI GAWTC 6 cut(s) 33, 319, 1447, 1921, 1959, 2034
PflMI CCANNNNNTGG 1 cut(s) 993
Ple19I CGATCG 1 cut(s) 2029
PleI GAGTC 3 cut(s) 398, 491, 1563
PpsI GAGTC 3 cut(s) 398, 491, 1563
Ppu21I YACGTR 1 cut(s) 666
PsiI TTATAA 1 cut(s) 1058
Psp6I CCWGG 3 cut(s) 1020, 1172, 1450
PspEI GGTNACC 1 cut(s) 997
PspFI CCCAGC 3 cut(s) 92, 305, 389
PspGI CCWGG 3 cut(s) 1020, 1172, 1450
PspN4I GGNNCC 7 cut(s) 353, 1011, 1017, 1437, 1617, 1887, 2076
PspPI GGNCC 4 cut(s) 1009, 1035, 1201, 1521
PspXI VCTCGAGB 1 cut(s) 1647
PstI CTGCAG 1 cut(s) 955
PstNI CAGNNNCTG 1 cut(s) 1762
PsuI RGATCY 2 cut(s) 1068, 2074
PvuI CGATCG 1 cut(s) 2029
PvuII CAGCTG 3 cut(s) 358, 618, 917
RsaI GTAC 2 cut(s) 1197, 1946
RsaNI GTAC 2 cut(s) 1196, 1945
RseI CAYNNNNRTG 3 cut(s) 459, 1289, 1516
SaqAI TTAA 3 cut(s) 20, 785, 2057
Sau3AI GATC 6 cut(s) 3, 758, 835, 1068, 2026, 2074
Sau96I GGNCC 4 cut(s) 1009, 1035, 1201, 1521
ScaI AGTACT 1 cut(s) 1946
SchI GAGTC 3 cut(s) 398, 492, 1564
ScrFI CCNGG 4 cut(s) 1013, 1022, 1174, 1452
SduI GDGCHC 4 cut(s) 1020, 1440, 1818, 1878
SexAI ACCWGGT 1 cut(s) 1172
SfaNI GCATC 8 cut(s) 241, 712, 1058, 1456, 1493, 1836, 2076, 2107
SfcI CTRYAG 2 cut(s) 619, 951
Sfr274I CTCGAG 1 cut(s) 1647
SfuI TTCGAA 2 cut(s) 380, 419
SinI GGWCC 2 cut(s) 1201, 1521
SlaI CTCGAG 1 cut(s) 1647
SmiMI CAYNNNNRTG 3 cut(s) 459, 1289, 1516
SmlI CTYRAG 2 cut(s) 1157, 1647
SmoI CTYRAG 2 cut(s) 1157, 1647
SnaBI TACGTA 1 cut(s) 666
SpeI ACTAGT 1 cut(s) 716
SphI GCATGC 1 cut(s) 1347
SseBI AGGCCT 1 cut(s) 1146
SsiI CCGC 9 cut(s) 116, 128, 172, 188, 199, 725, 1549, 1951, 2102
SspI AATATT 1 cut(s) 1971
SspMI CTAG 3 cut(s) 717, 1532, 1691
StuI AGGCCT 1 cut(s) 1146
StyD4I CCNGG 4 cut(s) 1011, 1020, 1172, 1450
StyI CCWWGG 3 cut(s) 132, 1302, 1836
TaaI ACNGT 6 cut(s) 580, 631, 1210, 1408, 1727, 1813
TaiI ACGT 3 cut(s) 26, 668, 712
TaqI TCGA 7 cut(s) 168, 380, 419, 437, 527, 691, 1648
TatI WGTACW 1 cut(s) 1944
TauI GCSGC 4 cut(s) 118, 131, 175, 1953
TfiI GAWTC 6 cut(s) 33, 319, 1447, 1921, 1959, 2034
Tru1I TTAA 3 cut(s) 20, 785, 2057
Tru9I TTAA 3 cut(s) 20, 785, 2057
TscAI CASTG 8 cut(s) 484, 687, 900, 1037, 1222, 1818, 2068, 2116
TseFI GTSAC 2 cut(s) 238, 1507
Tsp45I GTSAC 2 cut(s) 238, 1507
TspDTI ATGAA 6 cut(s) 253, 540, 1483, 1620, 1800, 2064
TspGWI ACGGA 3 cut(s) 662, 1170, 1739
TspRI CASTG 8 cut(s) 484, 687, 900, 1037, 1222, 1818, 2068, 2116
Van91I CCANNNNNTGG 1 cut(s) 993
VneI GTGCAC 1 cut(s) 1814
VpaK11BI GGWCC 2 cut(s) 1201, 1521
XapI RAATTY 5 cut(s) 382, 637, 1607, 1641, 1799
XceI RCATGY 1 cut(s) 1347
XcmI CCANNNNNNNNNTGG 2 cut(s) 139, 397
XhoI CTCGAG 1 cut(s) 1647
XmnI GAANNNNTTC 1 cut(s) 1379
XspI CTAG 3 cut(s) 717, 1532, 1691
ZrmI AGTACT 1 cut(s) 1946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.