Rh2BG606500

Cytosolic domain of 10TM putative phosphate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000893
Physical Location & Seq
Reverse (-)
82798522 .. 82801916
3395 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG606500.1

Sequence Viewer

Length: 1605 bp
ATGGCTCACTTCTATTCATCCAAACCTCAGCCTAATCAGTTCACAGTATTGGTTCGTGGTATTCCTGTCCTATCTGGGAGCAGCGGCAGTGAAACCGTTGACAGATTTTTTACAGAATATTACTCTTCTACTTATCTTTCACACTCGGTGATTCGTCGAACTAGCAAACTCCAACGTCTCACTAGTGCCGCAGATAAGGTTTACAGAACGCTTGCCCGTCTAAAGTCAGAAAAGGATCCACAGAAAAGATTCAAGCGTGATGGGCTTTTTGGAAGCAAAGTAGATGGTTTGGATCACTATGGAAAGAAATTGGATGATTTAGAAGATACTGTTAGATTAGAGCAATCATCGTTGGCAGGAAAGGAAGTTTCAGCAGCCTTTGTGTCATTCAAGTCCCGACTTGCTGCTGCAATAGCTGTAAACATTCAACAAGGAACAAATCCCACAGAGTGGGTCACAGAGGGCGCTCCTGAGCCTCAGGACGTTCATTGGCCCTTCTTTTCTTCATCTTTTATAAAAAGATGGGTCTCCAAGCTGGTGGTGGTGGTTGCATATGCTGCTGTTATAATTCTATTCCTCATTCCAGTTGCAATCGTACAGGGCCTCACTAATCTTGAACAGTTAGAAACCTGGTTTCCTTTTCTCACAAGCATACTGAATTTAACAGTCGTCAGTGAAGTCATAACTGGATATCTTCCAAGTCTTATTCTTCAGTTGTTTCTTTCTTTGGTGCCACCCATCATGATATTGTTGTCATCCATGGAAGGATACATCTCTTTCAGTCAGATACAAAAAGGTGCATGCACGAAGATGTTGTGGTTTACCATATGGAACATTTTCTTTGCAAATGTACTATCAGGAACAGCTCTCTCTGAACTCGATATCCTTCTTGAGCCCAAAGAGATTCCTGGGCTACTTGCTGATGGTGTTCCAGCACAGGCATCATTCTTCATTGCATATGTTGTGACATCTGGATGGACCAGTACTGTATCATCAGAACTCTTCCGCTTGAAACCCCTGATTTTCAGTATGATAAAAAGACTATTTTCAGGAAACGATGGTGATGAATTTGAGGCTCCTTCAATTCCATACCACAAAGAAATTCCTAAAATTCTATTATTTGGAGTCCTTGGAATCACATACTTCTTGCTGGCTCCATTAATTCTACCGTTCCTTCTGGTTTACTGCTGTATGGGATACCTAATCTTTCGCAATCAGCTATTGAATGTATATGCACCCAAGTATGAAACTGGTGGAAAACTTTGGCCTATAGTGCACAATTCAACAATATTTTCCTTGGTACTTATGCACATCATTGCGATTGGAATATTTGGGATTAAGACGCTTCCCTTAGCTGCTAGTTTGATGATTCCTCTTCCAATTCTCACTCTTCTTTTCAATGAGTACTGCCGCAAACGATTTCTACCGATATTCAAATCATATCCTGTTGAGTGTTTGGTAAAGAAAGATATCGAAGACCAGAGTGATCCTTCAATGGATGCATTTTATGATAAATTACGCACTGCGTATGAGGATCCGGTTTTGCTGCCAATCCAACGTCGAAGAAGCAGAGACGGCTACAACTCTCCACTCCTTCCCCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

534

Amino Acids

60.11

Weight (kDa)

8.81

Isoelectric Point (pI)

49.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHM7_cyt PF14703 13 - 165 1.2e-34 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 178 - 444 3.7e-75 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 515, 566
AccB1I GGYRCC 1 cut(s) 730
AccB7I CCANNNNNTGG 1 cut(s) 450
AciI CCGC 5 cut(s) 84, 189, 1006, 1411, 1600
AclWI GGATC 6 cut(s) 230, 243, 300, 1481, 1529, 1542
AcsI RAATTY 4 cut(s) 658, 1067, 1101, 1110
AcuI CTGAAG 1 cut(s) 695
AdeI CACNNNGTG 2 cut(s) 148, 450
AfaI GTAC 5 cut(s) 597, 852, 985, 1302, 1406
AfiI CCNNNNNNNGG 1 cut(s) 450
AhlI ACTAGT 1 cut(s) 182
AjnI CCWGG 2 cut(s) 629, 907
AloI GAACNNNNNNTCC 2 cut(s) 867, 899
AluBI AGCT 5 cut(s) 416, 535, 866, 1219, 1355
AluI AGCT 5 cut(s) 416, 535, 866, 1219, 1355
Alw21I GWGCWC 1 cut(s) 1278
Alw26I GTCTC 3 cut(s) 182, 532, 1566
Alw44I GTGCAC 1 cut(s) 1274
AlwI GGATC 6 cut(s) 230, 243, 300, 1481, 1529, 1542
AoxI GGCC 3 cut(s) 491, 601, 1265
ApaLI GTGCAC 1 cut(s) 1274
ApeKI GCWGC 7 cut(s) 81, 374, 404, 407, 557, 1355, 1546
ApoI RAATTY 4 cut(s) 658, 1067, 1101, 1110
AseI ATTAAT 1 cut(s) 1160
Asp700I GAANNNNTTC 2 cut(s) 248, 836
AspLEI GCGC 1 cut(s) 467
AspS9I GGNCC 3 cut(s) 492, 601, 978
AsuHPI GGTGA 2 cut(s) 160, 1073
AvaII GGWCC 1 cut(s) 978
AxyI CCTNAGG 1 cut(s) 477
BaeGI GKGCMC 1 cut(s) 1278
BamHI GGATCC 2 cut(s) 235, 1534
BanI GGYRCC 1 cut(s) 730
BanII GRGCYC 1 cut(s) 897
BbsI GAAGAC 1 cut(s) 1482
Bbv12I GWGCWC 1 cut(s) 1278
BbvCI CCTCAGC 1 cut(s) 27
BbvI GCAGC 7 cut(s) 93, 386, 391, 394, 544, 1342, 1533
BccI CCATC 7 cut(s) 254, 278, 516, 746, 917, 969, 1052
BceAI ACGGC 1 cut(s) 1591
BciT130I CCWGG 2 cut(s) 631, 909
BciVI GTATCC 2 cut(s) 761, 1190
BcoDI GTCTC 3 cut(s) 182, 532, 1566
BcuI ACTAGT 1 cut(s) 182
BfaI CTAG 3 cut(s) 162, 183, 1359
BfmI CTRYAG 1 cut(s) 1269
BfoI RGCGCY 1 cut(s) 468
BfuI GTATCC 2 cut(s) 761, 1190
BmcAI AGTACT 2 cut(s) 985, 1406
Bme1390I CCNGG 2 cut(s) 631, 909
Bme18I GGWCC 1 cut(s) 978
BmgT120I GGNCC 3 cut(s) 492, 601, 978
BmiI GGNNCC 5 cut(s) 237, 732, 1077, 1155, 1536
BmrFI CCNGG 2 cut(s) 631, 909
BmsI GCATC 2 cut(s) 950, 1489
BpiI GAAGAC 1 cut(s) 1482
Bpu10I CCTNAGC 3 cut(s) 27, 471, 1351
BpuEI CTTGAG 1 cut(s) 911
BsaI GGTCTC 1 cut(s) 532
BsaJI CCNNGG 4 cut(s) 759, 908, 1129, 1296
BsaWI WCCGGW 1 cut(s) 1537
Bsc4I CCNNNNNNNGG 1 cut(s) 450
Bse1I ACTGG 4 cut(s) 584, 691, 981, 1255
Bse21I CCTNAGG 1 cut(s) 477
Bse3DI GCAATG 2 cut(s) 951, 1314
BseBI CCWGG 2 cut(s) 631, 909
BseDI CCNNGG 4 cut(s) 759, 908, 1129, 1296
BseGI GGATG 5 cut(s) 17, 319, 755, 980, 1504
BseLI CCNNNNNNNGG 1 cut(s) 450
BseMI GCAATG 2 cut(s) 951, 1314
BseMII CTCAG 3 cut(s) 41, 462, 491
BseNI ACTGG 4 cut(s) 584, 691, 981, 1255
BseSI GKGCMC 1 cut(s) 1278
BseXI GCAGC 7 cut(s) 93, 386, 391, 394, 544, 1342, 1533
BshFI GGCC 3 cut(s) 493, 603, 1267
BshNI GGYRCC 1 cut(s) 730
BsiHKAI GWGCWC 1 cut(s) 1278
BsiSI CCGG 1 cut(s) 1538
BslFI GGGAC 1 cut(s) 379
BslI CCNNNNNNNGG 1 cut(s) 450
BsmAI GTCTC 3 cut(s) 182, 532, 1566
BsmBI CGTCTC 2 cut(s) 182, 1566
BsmFI GGGAC 1 cut(s) 379
BsnI GGCC 3 cut(s) 493, 603, 1267
Bso31I GGTCTC 1 cut(s) 532
Bsp1286I GDGCHC 2 cut(s) 897, 1278
Bsp143I GATC 4 cut(s) 235, 292, 1486, 1534
Bsp19I CCATGG 1 cut(s) 759
BspACI CCGC 5 cut(s) 84, 189, 1006, 1411, 1600
BspANI GGCC 3 cut(s) 493, 603, 1267
BspCNI CTCAG 3 cut(s) 40, 463, 490
BspHI TCATGA 1 cut(s) 741
BspLI GGNNCC 5 cut(s) 237, 732, 1077, 1155, 1536
BspPI GGATC 6 cut(s) 230, 243, 300, 1481, 1529, 1542
BspT107I GGYRCC 1 cut(s) 730
BspTNI GGTCTC 1 cut(s) 532
BsrDI GCAATG 2 cut(s) 951, 1314
BsrI ACTGG 4 cut(s) 584, 691, 981, 1255
BssECI CCNNGG 4 cut(s) 759, 908, 1129, 1296
BssMI GATC 4 cut(s) 235, 292, 1486, 1534
BssT1I CCWWGG 3 cut(s) 759, 1129, 1296
Bst2UI CCWGG 2 cut(s) 631, 909
Bst4CI ACNGT 7 cut(s) 46, 97, 331, 621, 667, 988, 1170
Bst6I CTCTTC 4 cut(s) 130, 1007, 1380, 1395
BstAPI GCANNNNNTGC 1 cut(s) 557
BstC8I GCNNGC 3 cut(s) 213, 802, 1152
BstDEI CTNAG 4 cut(s) 27, 471, 477, 1351
BstDSI CCRYGG 1 cut(s) 759
BstF5I GGATG 5 cut(s) 17, 319, 755, 980, 1504
BstH2I RGCGCY 1 cut(s) 468
BstHHI GCGC 1 cut(s) 467
BstKTI GATC 4 cut(s) 238, 295, 1489, 1537
BstMAI GTCTC 3 cut(s) 182, 532, 1566
BstMBI GATC 4 cut(s) 235, 292, 1486, 1534
BstMWI GCNNNNNNNGC 5 cut(s) 262, 413, 557, 1273, 1575
BstNI CCWGG 2 cut(s) 631, 909
BstNSI RCATGY 1 cut(s) 804
BstSCI CCNGG 2 cut(s) 629, 907
BstSFI CTRYAG 1 cut(s) 1269
BstSLI GKGCMC 1 cut(s) 1278
BstV1I GCAGC 7 cut(s) 93, 386, 391, 394, 544, 1342, 1533
BstV2I GAAGAC 1 cut(s) 1482
BstX2I RGATCY 2 cut(s) 235, 1534
BstXI CCANNNNNNTGG 1 cut(s) 538
BstYI RGATCY 2 cut(s) 235, 1534
Bsu36I CCTNAGG 1 cut(s) 477
BsuI GTATCC 2 cut(s) 761, 1190
BsuRI GGCC 3 cut(s) 493, 603, 1267
BtgI CCRYGG 1 cut(s) 759
BtsCI GGATG 5 cut(s) 17, 319, 755, 980, 1504
BtsI GCAGTG 2 cut(s) 94, 1521
BtsIMutI CAGTG 3 cut(s) 94, 679, 1521
Cac8I GCNNGC 3 cut(s) 213, 802, 1152
CciI TCATGA 1 cut(s) 741
CfoI GCGC 1 cut(s) 467
Cfr13I GGNCC 3 cut(s) 492, 601, 978
CseI GACGC 1 cut(s) 1351
CsiI ACCWGGT 1 cut(s) 629
Csp6I GTAC 5 cut(s) 596, 851, 984, 1301, 1405
CviAII CATG 3 cut(s) 742, 760, 801
CviQI GTAC 5 cut(s) 596, 851, 984, 1301, 1405
DdeI CTNAG 4 cut(s) 27, 471, 477, 1351
DpnI GATC 4 cut(s) 237, 294, 1488, 1536
DpnII GATC 4 cut(s) 235, 292, 1486, 1534
DraIII CACNNNGTG 2 cut(s) 148, 450
Eam1104I CTCTTC 4 cut(s) 130, 1007, 1380, 1395
EarI CTCTTC 4 cut(s) 130, 1007, 1380, 1395
Eco130I CCWWGG 3 cut(s) 759, 1129, 1296
Eco24I GRGCYC 1 cut(s) 897
Eco31I GGTCTC 1 cut(s) 532
Eco32I GATATC 3 cut(s) 692, 883, 1471
Eco47I GGWCC 1 cut(s) 978
Eco57I CTGAAG 1 cut(s) 695
Eco81I CCTNAGG 1 cut(s) 477
EcoO109I RGGNCCY 1 cut(s) 601
EcoRII CCWGG 2 cut(s) 629, 907
EcoRV GATATC 3 cut(s) 692, 883, 1471
EcoT14I CCWWGG 3 cut(s) 759, 1129, 1296
EcoT22I ATGCAT 1 cut(s) 1504
EcoT38I GRGCYC 1 cut(s) 897
ErhI CCWWGG 3 cut(s) 759, 1129, 1296
Esp3I CGTCTC 2 cut(s) 182, 1566
FaeI CATG 3 cut(s) 745, 763, 804
FaqI GGGAC 1 cut(s) 379
FatI CATG 3 cut(s) 741, 759, 800
FauNDI CATATG 3 cut(s) 553, 827, 958
FokI GGATG 5 cut(s) 4, 326, 742, 987, 1511
FriOI GRGCYC 1 cut(s) 897
FspBI CTAG 3 cut(s) 162, 183, 1359
GlaI GCGC 1 cut(s) 466
HaeII RGCGCY 1 cut(s) 468
HaeIII GGCC 3 cut(s) 493, 603, 1267
HapII CCGG 1 cut(s) 1538
HgaI GACGC 1 cut(s) 1351
HhaI GCGC 1 cut(s) 467
Hin1II CATG 3 cut(s) 745, 763, 804
Hin6I GCGC 1 cut(s) 465
HinP1I GCGC 1 cut(s) 465
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HinfI GANTC 6 cut(s) 151, 249, 904, 1125, 1134, 1369
HpaII CCGG 1 cut(s) 1538
HphI GGTGA 2 cut(s) 160, 1073
Hpy166II GTNNAC 7 cut(s) 42, 100, 202, 421, 822, 1183, 1276
Hpy188I TCNGA 4 cut(s) 229, 786, 874, 997
Hpy188III TCNNGA 9 cut(s) 396, 470, 479, 614, 742, 858, 890, 972, 1050
Hpy8I GTNNAC 7 cut(s) 42, 100, 202, 421, 822, 1183, 1276
Hpy99I CGWCG 2 cut(s) 159, 1563
HpyAV CCTTC 7 cut(s) 505, 758, 896, 1089, 1184, 1500, 1604
HpyCH4III ACNGT 7 cut(s) 46, 97, 331, 621, 667, 988, 1170
HpyCH4IV ACGT 3 cut(s) 175, 483, 1558
HpyF10VI GCNNNNNNNGC 5 cut(s) 262, 413, 557, 1273, 1575
HpyF3I CTNAG 4 cut(s) 27, 471, 477, 1351
HpySE526I ACGT 3 cut(s) 175, 483, 1558
Hsp92II CATG 3 cut(s) 745, 763, 804
HspAI GCGC 1 cut(s) 465
Kzo9I GATC 4 cut(s) 235, 292, 1486, 1534
LmnI GCTCC 4 cut(s) 78, 472, 1081, 1159
Lsp1109I GCAGC 7 cut(s) 93, 386, 391, 394, 544, 1342, 1533
LweI GCATC 2 cut(s) 950, 1489
MabI ACCWGGT 1 cut(s) 629
MaeI CTAG 3 cut(s) 162, 183, 1359
MaeII ACGT 3 cut(s) 175, 483, 1558
MaeIII GTNAC 2 cut(s) 454, 964
MalI GATC 4 cut(s) 237, 294, 1488, 1536
MboI GATC 4 cut(s) 235, 292, 1486, 1534
MflI RGATCY 2 cut(s) 235, 1534
MhlI GDGCHC 2 cut(s) 897, 1278
MlyI GAGTC 1 cut(s) 1134
MmeI TCCRAC 2 cut(s) 196, 1579
MnlI CCTC 8 cut(s) 36, 454, 486, 587, 614, 1066, 1383, 1525
Mph1103I ATGCAT 1 cut(s) 1504
MroXI GAANNNNTTC 2 cut(s) 248, 836
MseI TTAA 3 cut(s) 662, 1160, 1338
MslI CAYNNNNRTG 2 cut(s) 809, 973
MspA1I CMGCKG 2 cut(s) 84, 1602
MspI CCGG 1 cut(s) 1538
MspR9I CCNGG 2 cut(s) 631, 909
MvaI CCWGG 2 cut(s) 631, 909
MwoI GCNNNNNNNGC 5 cut(s) 262, 413, 557, 1273, 1575
NcoI CCATGG 1 cut(s) 759
NdeI CATATG 3 cut(s) 553, 827, 958
NdeII GATC 4 cut(s) 235, 292, 1486, 1534
NlaIII CATG 3 cut(s) 745, 763, 804
NlaIV GGNNCC 5 cut(s) 237, 732, 1077, 1155, 1536
NmuCI GTSAC 2 cut(s) 454, 964
NsiI ATGCAT 1 cut(s) 1504
NspI RCATGY 1 cut(s) 804
PaeI GCATGC 1 cut(s) 804
PagI TCATGA 1 cut(s) 741
PdmI GAANNNNTTC 2 cut(s) 248, 836
PfeI GAWTC 5 cut(s) 151, 249, 904, 1134, 1369
PflMI CCANNNNNTGG 1 cut(s) 450
PleI GAGTC 1 cut(s) 1133
PpsI GAGTC 1 cut(s) 1133
PshBI ATTAAT 1 cut(s) 1160
PsiI TTATAA 2 cut(s) 515, 566
Psp6I CCWGG 2 cut(s) 629, 907
PspGI CCWGG 2 cut(s) 629, 907
PspN4I GGNNCC 5 cut(s) 237, 732, 1077, 1155, 1536
PspPI GGNCC 3 cut(s) 492, 601, 978
PsuI RGATCY 2 cut(s) 235, 1534
RsaI GTAC 5 cut(s) 597, 852, 985, 1302, 1406
RsaNI GTAC 5 cut(s) 596, 851, 984, 1301, 1405
RseI CAYNNNNRTG 2 cut(s) 809, 973
SaqAI TTAA 3 cut(s) 662, 1160, 1338
Sau3AI GATC 4 cut(s) 235, 292, 1486, 1534
Sau96I GGNCC 3 cut(s) 492, 601, 978
ScaI AGTACT 2 cut(s) 985, 1406
SchI GAGTC 1 cut(s) 1134
ScrFI CCNGG 2 cut(s) 631, 909
SduI GDGCHC 2 cut(s) 897, 1278
SexAI ACCWGGT 1 cut(s) 629
SfaNI GCATC 2 cut(s) 950, 1489
SfcI CTRYAG 1 cut(s) 1269
SinI GGWCC 1 cut(s) 978
SmiMI CAYNNNNRTG 2 cut(s) 809, 973
SmlI CTYRAG 1 cut(s) 890
SmoI CTYRAG 1 cut(s) 890
SpeI ACTAGT 1 cut(s) 182
SphI GCATGC 1 cut(s) 804
SsiI CCGC 5 cut(s) 84, 189, 1006, 1411, 1600
SspI AATATT 3 cut(s) 119, 1290, 1329
SspMI CTAG 3 cut(s) 162, 183, 1359
StyD4I CCNGG 2 cut(s) 629, 907
StyI CCWWGG 3 cut(s) 759, 1129, 1296
TaaI ACNGT 7 cut(s) 46, 97, 331, 621, 667, 988, 1170
TaiI ACGT 3 cut(s) 178, 486, 1561
TaqI TCGA 4 cut(s) 157, 879, 1473, 1561
TatI WGTACW 3 cut(s) 850, 983, 1404
TauI GCSGC 3 cut(s) 87, 191, 1413
TfiI GAWTC 5 cut(s) 151, 249, 904, 1134, 1369
Tru1I TTAA 3 cut(s) 662, 1160, 1338
Tru9I TTAA 3 cut(s) 662, 1160, 1338
TscAI CASTG 3 cut(s) 94, 679, 1528
TseFI GTSAC 2 cut(s) 454, 964
TseI GCWGC 7 cut(s) 81, 374, 404, 407, 557, 1355, 1546
Tsp45I GTSAC 2 cut(s) 454, 964
TspDTI ATGAA 6 cut(s) 6, 476, 495, 940, 1080, 1260
TspRI CASTG 3 cut(s) 94, 679, 1528
Van91I CCANNNNNTGG 1 cut(s) 450
VneI GTGCAC 1 cut(s) 1274
VpaK11BI GGWCC 1 cut(s) 978
VspI ATTAAT 1 cut(s) 1160
XapI RAATTY 4 cut(s) 658, 1067, 1101, 1110
XceI RCATGY 1 cut(s) 804
XcmI CCANNNNNNNNNTGG 1 cut(s) 538
XmnI GAANNNNTTC 2 cut(s) 248, 836
XspI CTAG 3 cut(s) 162, 183, 1359
ZrmI AGTACT 2 cut(s) 985, 1406
Zsp2I ATGCAT 1 cut(s) 1504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.