MD17G1053500.v1.1

Cytosolic domain of 10TM putative phosphate transporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
4157091 .. 4163797
6707 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1053500.v1.1.491

Sequence Viewer

Length: 2286 bp
ATGCTCCTTTCGGCGCTTTTAACGTCGGTGGGAATCAATCTCGCCCTCTGTCTCGTGTTCCTCACTCTGTATTCAGTATTCAAGAAGCAGCCCAGCAACCTCGGCGTCTATTCGCCGCGCTTGTTGGCGGCCAAGGGAGCGTCGGAGGAGAGCAACGGGTTCAATTTCGAGCGGCTCTTGCCGACGGTGGGCTGGGTGAGGACGGCGTGGCAGCCCTCTGAGGACGAGTTTCTGTCCCTCACCAGCTTGGATGCTGTCGTCTTCATGCGCATTTTTATCTTCAGTTCGAGAGTATTTGGGTTTGCTGGTTCGAGAGTATTTGGGTTTGCTGGTTCGAGAGTATTTGGGTTTGCTGGTTCGAGAGTATTTGGGTTTGCTGGTTCGAGAGTATTTGGGTTTGCTGGTTCGAGAGTATTTGGTTTGAGAGTGTTTGGGTTTGCTGGGATTGTTGGGGTTTTGGTTCTGCTTCCGATAAATTTTCTGGGGGACCAGCTGAACCGGGATTTGGATATTTCGGATTTGCCCAGTACGTCATTGGACTCCTTCAGTATTTCGAATGTGAATGCCGGCTCGAAATGGTTATGGGTTCACTTTTGTGCAGCATACATTGTCACTGGAGTTGTCTGCTATCTTCTTTATTATGAGTATAGCTATATCTCATCGAAAAGAATTGCTCATTTCTATTCATCCAAACCTCAGCCTCATCAGTTTACAGTAGTAGTTCGTTCTGTTCCTGTATCATCTGGGAGCAGCTGCAGTGAGACTGTTGAGAGTTTTTTTACAGAGAATTATCCTTCTACTTATCTTTCACATTCAGTGGTTCATCGAACTAACAAACTCCAAGGACTCACTAGTGAGGCAGGGAAACTATACAGAAAGCTTATGCGCCTGAGATCAGAAACTAATACTCAGCAAAGATTAAGGCGTGAGGGCTGTTGGGGGCTGTGTGGACGCAAAGTTGATGCTTTAGACTACTATGGAAAGAAATTGGATGATTTAGAAGATAATGTGAGAATGGAGCAAACGTCAGTGGCAGGAAAGGACGTTGCAGCTGCCTTTGTGTCATTCAAGTCCCGGCTTGCTGCTGCAGTAGCTTTTCACATTCAGCAAGGAGAAAATCCCATAGAATGGGTTACCGAGAGGGCTCCGGAGCCCCAGGATGTTCACTGGCCCTTCTTTTCTGCATCTTTTATGAAAAGATGGATCTCCAAGCTGGTGGTGGTGGTTGCATATACTGCTCTTACAGTTCTATTCCTCATTCCAGTTGTAGTAGTGCAAGGCCTTACCAATCTTAATCAGTTGGAAACCTGGTTCCCGTTTCTGACAAGCATACTGGACCTAACAGTTGTCAGTGCAGTCATAACAGGATATCTTCCAAGTCTTATTCTTCAAATGTTCATGTCGTTTGTGCCACCCGTCATGATAATGTTGTCTTCCTTGGAAGGATACATCTCTTTCAGTCAGATACAAAAAAGTGCATGCAGCAAGATGTTGGGGTTCACAATATGGAATCTTTTCTTGGCAAATACACTATCAGGAACACTTCTCTATGGGTTCGAAATCTTTCTTGAGCCCAAAAAGATTCCGGGGATACTTGCTGATGCTGTTCCAGCACAGGCATCATTCTTCATTGCATATGTTGTGACATCTGGATGGACCAGTCTTCTATCTTCAGAACTCTTCCGCTTGACTCGCCTGATTTTGAGCATCATAAAAAGACCATTTTCAGGAAAAGATGATGAATTTGAAGCTCCTCCATTTCCATACCACAGTGCAATTCCTAAAGTTCTCTTTTTTGGACTCCTCGGATTAACATACTTCTTCCTCGCTCCACTAATTCTCCCGTTCCTCGTGGTTTACTGTTGTCTGGGATACATAATCTTCCGTAACCAGTTTCTGAATGTGTATGAACCCAAGTACGAAACGGGTGGAAGATTTTGGCCAACAGTGCACAATTCAACAATTTTTTCCTTGGTGCTGATGCACATTATTGCAATTGGAATGTTTGGGCTCAAAGAGCTCCCCTTAGCGGCCACTTTGACTATTCCTCTTCCGATTCTCACGCTTCTCTTCAATGAGTACTGCCGCAAACGATTCCTTCCAATATTCCAAGACTATCCAGCTGAGTGTTTGATAAAGAAAGATAGAGAAGACGAGAAGGATCCCACAATCTTTGCATTTTATGAAAAGTTAACCACTGCTTATAGGGATCCAGCTCTGATGCCAATGCAGCATCCGCGGAGCACTGATGGACACAGCTCTCCCCTTCTTCAATCTGTCGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

762

Amino Acids

85.34

Weight (kDa)

8.82

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 5 - 101 7e-16 Late exocytosis, associated with Golgi transport
RSN1_TM PF13967 139 - 215 5.6e-15 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 236 - 391 4.8e-39 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 404 - 669 3e-73 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 269
AccB7I CCANNNNNTGG 1 cut(s) 1128
AccBSI CCGCTC 1 cut(s) 172
AccII CGCG 2 cut(s) 118, 2239
AccIII TCCGGA 1 cut(s) 1147
AciI CCGC 8 cut(s) 116, 128, 172, 1684, 2030, 2086, 2237, 2239
AclWI GGATC 5 cut(s) 1211, 2156, 2169, 2204, 2217
AcoI YGGCCR 3 cut(s) 129, 1940, 2031
AcsI RAATTY 2 cut(s) 475, 1742
AcuI CTGAAG 3 cut(s) 265, 529, 1656
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 3 cut(s) 529, 1919, 2081
AfiI CCNNNNNNNGG 5 cut(s) 188, 505, 1128, 1727, 2029
AgsI TTSAA 8 cut(s) 82, 163, 1069, 1391, 1748, 1959, 2074, 2273
AhlI ACTAGT 1 cut(s) 851
AjnI CCWGG 2 cut(s) 1155, 1307
AjuI GAANNNNNNNTTGG 4 cut(s) 488, 520, 1502, 1534
AleI CACNNNNGTG 1 cut(s) 594
AloI GAACNNNNNNTCC 2 cut(s) 1295, 1327
Alw21I GWGCWC 3 cut(s) 1953, 2022, 2246
Alw26I GTCTC 2 cut(s) 56, 755
Alw44I GTGCAC 1 cut(s) 1949
AlwI GGATC 5 cut(s) 1211, 2156, 2169, 2204, 2217
AlwNI CAGNNNCTG 1 cut(s) 1897
Aor13HI TCCGGA 1 cut(s) 1147
AoxI GGCC 5 cut(s) 129, 1169, 1279, 1940, 2031
ApaLI GTGCAC 1 cut(s) 1949
ApoI RAATTY 2 cut(s) 475, 1742
Asp700I GAANNNNTTC 2 cut(s) 1514, 1563
AspLEI GCGC 4 cut(s) 16, 120, 270, 888
AspS9I GGNCC 4 cut(s) 487, 1170, 1336, 1656
AsuC2I CCSGG 3 cut(s) 500, 1075, 1587
AsuHPI GGTGA 2 cut(s) 208, 232
AsuII TTCGAA 2 cut(s) 554, 1557
AvaII GGWCC 3 cut(s) 487, 1336, 1656
BaeGI GKGCMC 1 cut(s) 1953
BalI TGGCCA 1 cut(s) 1942
BamHI GGATCC 2 cut(s) 2161, 2209
BanII GRGCYC 5 cut(s) 1147, 1155, 1575, 2013, 2022
BauI CACGAG 2 cut(s) 53, 1850
BbsI GAAGAC 4 cut(s) 253, 1425, 1655, 2157
Bbv12I GWGCWC 3 cut(s) 1953, 2022, 2246
BbvCI CCTCAGC 1 cut(s) 696
BccI CCATC 3 cut(s) 1194, 1647, 2243
BceAI ACGGC 1 cut(s) 219
BciT130I CCWGG 2 cut(s) 1157, 1309
BciVI GTATCC 3 cut(s) 1439, 1584, 1865
BcnI CCSGG 3 cut(s) 500, 1075, 1587
BcoDI GTCTC 2 cut(s) 56, 755
BcuI ACTAGT 1 cut(s) 851
BfaI CTAG 1 cut(s) 852
BfmI CTRYAG 2 cut(s) 754, 1086
BfoI RGCGCY 1 cut(s) 17
BfuI GTATCC 3 cut(s) 1439, 1584, 1865
BmcAI AGTACT 1 cut(s) 2081
Bme1390I CCNGG 5 cut(s) 500, 1075, 1157, 1309, 1587
Bme18I GGWCC 3 cut(s) 487, 1336, 1656
BmgT120I GGNCC 4 cut(s) 487, 1170, 1336, 1656
BmiI GGNNCC 6 cut(s) 488, 1146, 1152, 1313, 2163, 2211
BmrFI CCNGG 5 cut(s) 500, 1075, 1157, 1309, 1587
BmrI ACTGGG 1 cut(s) 519
BmsI GCATC 9 cut(s) 241, 952, 1193, 1591, 1628, 1716, 1971, 2211, 2242
BmuI ACTGGG 1 cut(s) 519
BpiI GAAGAC 4 cut(s) 253, 1425, 1655, 2157
BpmI CTGGAG 1 cut(s) 636
Bpu10I CCTNAGC 2 cut(s) 696, 2026
Bpu14I TTCGAA 2 cut(s) 554, 1557
BpuEI CTTGAG 1 cut(s) 1589
BpuMI CCSGG 3 cut(s) 500, 1075, 1587
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 9 cut(s) 100, 132, 841, 1155, 1437, 1586, 1804, 1971, 2237
BsaWI WCCGGW 1 cut(s) 1147
BsaXI ACNNNNNCTCC 4 cut(s) 1010, 1040, 1824, 1854
Bsc4I CCNNNNNNNGG 5 cut(s) 188, 505, 1128, 1727, 2029
Bse118I RCCGGY 1 cut(s) 566
Bse1I ACTGG 7 cut(s) 525, 619, 1172, 1262, 1338, 1659, 1891
Bse3DI GCAATG 1 cut(s) 1629
BseAI TCCGGA 1 cut(s) 1147
BseBI CCWGG 2 cut(s) 1157, 1309
BseDI CCNNGG 9 cut(s) 100, 132, 841, 1155, 1437, 1586, 1804, 1971, 2237
BseGI GGATG 6 cut(s) 256, 686, 997, 1165, 1658, 2233
BseLI CCNNNNNNNGG 5 cut(s) 188, 505, 1128, 1727, 2029
BseMI GCAATG 1 cut(s) 1629
BseMII CTCAG 5 cut(s) 210, 710, 881, 923, 2115
BseNI ACTGG 7 cut(s) 525, 619, 1172, 1262, 1338, 1659, 1891
BseRI GAGGAG 3 cut(s) 161, 1743, 1793
BseSI GKGCMC 1 cut(s) 1953
BseYI CCCAGC 3 cut(s) 92, 192, 440
BsgI GTGCAG 2 cut(s) 618, 1374
Bsh1236I CGCG 2 cut(s) 118, 2239
BshFI GGCC 5 cut(s) 131, 1171, 1281, 1942, 2033
BsiHKAI GWGCWC 3 cut(s) 1953, 2022, 2246
BsiSI CCGG 5 cut(s) 499, 567, 1075, 1148, 1586
BslFI GGGAC 3 cut(s) 220, 500, 1057
BslI CCNNNNNNNGG 5 cut(s) 188, 505, 1128, 1727, 2029
BsmAI GTCTC 2 cut(s) 56, 755
BsmFI GGGAC 3 cut(s) 220, 500, 1057
BsmI GAATGC 1 cut(s) 568
BsnI GGCC 5 cut(s) 131, 1171, 1281, 1942, 2033
Bsp119I TTCGAA 2 cut(s) 554, 1557
Bsp1286I GDGCHC 7 cut(s) 1147, 1155, 1575, 1953, 2013, 2022, 2246
Bsp13I TCCGGA 1 cut(s) 1147
Bsp143I GATC 4 cut(s) 893, 1203, 2161, 2209
BspACI CCGC 8 cut(s) 116, 128, 172, 1684, 2030, 2086, 2237, 2239
BspANI GGCC 5 cut(s) 131, 1171, 1281, 1942, 2033
BspCNI CTCAG 5 cut(s) 211, 709, 882, 922, 2116
BspEI TCCGGA 1 cut(s) 1147
BspFNI CGCG 2 cut(s) 118, 2239
BspHI TCATGA 1 cut(s) 1419
BspLI GGNNCC 6 cut(s) 488, 1146, 1152, 1313, 2163, 2211
BspMAI CTGCAG 2 cut(s) 758, 1090
BspPI GGATC 5 cut(s) 1211, 2156, 2169, 2204, 2217
BspT104I TTCGAA 2 cut(s) 554, 1557
BsrBI CCGCTC 1 cut(s) 172
BsrDI GCAATG 1 cut(s) 1629
BsrFI RCCGGY 1 cut(s) 566
BsrI ACTGG 7 cut(s) 525, 619, 1172, 1262, 1338, 1659, 1891
BssAI RCCGGY 1 cut(s) 566
BssECI CCNNGG 9 cut(s) 100, 132, 841, 1155, 1437, 1586, 1804, 1971, 2237
BssMI GATC 4 cut(s) 893, 1203, 2161, 2209
BssNI GRCGYC 1 cut(s) 105
BssSI CACGAG 2 cut(s) 53, 1850
BssT1I CCWWGG 4 cut(s) 132, 841, 1437, 1971
Bst2BI CACGAG 2 cut(s) 53, 1850
Bst2UI CCWGG 2 cut(s) 1157, 1309
Bst4CI ACNGT 8 cut(s) 187, 715, 766, 1246, 1345, 1772, 1862, 1948
Bst6I CTCTTC 3 cut(s) 1685, 2055, 2075
BstACI GRCGYC 1 cut(s) 105
BstAPI GCANNNNNTGC 1 cut(s) 1235
BstBI TTCGAA 2 cut(s) 554, 1557
BstC8I GCNNGC 3 cut(s) 568, 1080, 1480
BstDEI CTNAG 6 cut(s) 219, 696, 890, 909, 2026, 2124
BstDSI CCRYGG 1 cut(s) 2237
BstEII GGTNACC 1 cut(s) 1132
BstF5I GGATG 6 cut(s) 256, 686, 997, 1165, 1658, 2233
BstFNI CGCG 2 cut(s) 118, 2239
BstH2I RGCGCY 1 cut(s) 17
BstHHI GCGC 4 cut(s) 16, 120, 270, 888
BstKTI GATC 4 cut(s) 896, 1206, 2164, 2212
BstMAI GTCTC 2 cut(s) 56, 755
BstMBI GATC 4 cut(s) 893, 1203, 2161, 2209
BstNI CCWGG 2 cut(s) 1157, 1309
BstNSI RCATGY 1 cut(s) 1482
BstPI GGTNACC 1 cut(s) 1132
BstSCI CCNGG 5 cut(s) 498, 1073, 1155, 1307, 1585
BstSFI CTRYAG 2 cut(s) 754, 1086
BstSLI GKGCMC 1 cut(s) 1953
BstUI CGCG 2 cut(s) 118, 2239
BstV2I GAAGAC 4 cut(s) 253, 1425, 1655, 2157
BstX2I RGATCY 3 cut(s) 1203, 2161, 2209
BstXI CCANNNNNNTGG 1 cut(s) 1216
BstYI RGATCY 3 cut(s) 1203, 2161, 2209
BsuI GTATCC 3 cut(s) 1439, 1584, 1865
BsuRI GGCC 5 cut(s) 131, 1171, 1281, 1942, 2033
BtgI CCRYGG 1 cut(s) 2237
BtsCI GGATG 6 cut(s) 256, 686, 997, 1165, 1658, 2233
BtsI GCAGTG 2 cut(s) 763, 2196
Cac8I GCNNGC 3 cut(s) 568, 1080, 1480
CaiI CAGNNNCTG 1 cut(s) 1897
CciI TCATGA 1 cut(s) 1419
CfoI GCGC 4 cut(s) 16, 120, 270, 888
Cfr10I RCCGGY 1 cut(s) 566
Cfr13I GGNCC 4 cut(s) 487, 1170, 1336, 1656
Cfr42I CCGCGG 1 cut(s) 2240
CseI GACGC 3 cut(s) 94, 129, 960
CsiI ACCWGGT 1 cut(s) 1307
Csp6I GTAC 3 cut(s) 528, 1918, 2080
CspCI CAANNNNNGTGG 2 cut(s) 2155, 2190
CviAII CATG 4 cut(s) 265, 1399, 1420, 1479
CviQI GTAC 3 cut(s) 528, 1918, 2080
DdeI CTNAG 6 cut(s) 219, 696, 890, 909, 2026, 2124
DpnI GATC 4 cut(s) 895, 1205, 2163, 2211
DpnII GATC 4 cut(s) 893, 1203, 2161, 2209
EaeI YGGCCR 3 cut(s) 129, 1940, 2031
Eam1104I CTCTTC 3 cut(s) 1685, 2055, 2075
EarI CTCTTC 3 cut(s) 1685, 2055, 2075
Ecl136II GAGCTC 1 cut(s) 2020
Eco130I CCWWGG 4 cut(s) 132, 841, 1437, 1971
Eco147I AGGCCT 1 cut(s) 1281
Eco24I GRGCYC 5 cut(s) 1147, 1155, 1575, 2013, 2022
Eco32I GATATC 1 cut(s) 1370
Eco47I GGWCC 3 cut(s) 487, 1336, 1656
Eco53kI GAGCTC 1 cut(s) 2020
Eco57I CTGAAG 3 cut(s) 265, 529, 1656
Eco91I GGTNACC 1 cut(s) 1132
EcoICRI GAGCTC 1 cut(s) 2020
EcoO65I GGTNACC 1 cut(s) 1132
EcoRII CCWGG 2 cut(s) 1155, 1307
EcoRV GATATC 1 cut(s) 1370
EcoT14I CCWWGG 4 cut(s) 132, 841, 1437, 1971
EcoT38I GRGCYC 5 cut(s) 1147, 1155, 1575, 2013, 2022
ErhI CCWWGG 4 cut(s) 132, 841, 1437, 1971
FaeI CATG 4 cut(s) 268, 1402, 1423, 1482
FaqI GGGAC 3 cut(s) 220, 500, 1057
FatI CATG 4 cut(s) 264, 1398, 1419, 1478
FauNDI CATATG 1 cut(s) 1636
FokI GGATG 6 cut(s) 263, 673, 1004, 1172, 1665, 2220
FriOI GRGCYC 5 cut(s) 1147, 1155, 1575, 2013, 2022
FspAI RTGCGCAY 1 cut(s) 269
FspBI CTAG 1 cut(s) 852
FspI TGCGCA 1 cut(s) 269
GlaI GCGC 4 cut(s) 15, 119, 269, 887
GsaI CCCAGC 3 cut(s) 96, 196, 444
GsuI CTGGAG 1 cut(s) 636
HaeII RGCGCY 1 cut(s) 17
HaeIII GGCC 5 cut(s) 131, 1171, 1281, 1942, 2033
HapII CCGG 5 cut(s) 499, 567, 1075, 1148, 1586
HgaI GACGC 3 cut(s) 94, 129, 960
HhaI GCGC 4 cut(s) 16, 120, 270, 888
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 4 cut(s) 268, 1402, 1423, 1482
Hin6I GCGC 4 cut(s) 14, 118, 268, 886
HinP1I GCGC 4 cut(s) 14, 118, 268, 886
HincII GTYRAC 1 cut(s) 2193
HindII GTYRAC 1 cut(s) 2193
HindIII AAGCTT 1 cut(s) 878
HinfI GANTC 9 cut(s) 33, 539, 846, 1510, 1582, 1690, 1800, 2056, 2094
HpaI GTTAAC 1 cut(s) 2193
HpaII CCGG 5 cut(s) 499, 567, 1075, 1148, 1586
HphI GGTGA 2 cut(s) 208, 232
Hpy166II GTNNAC 8 cut(s) 589, 711, 950, 1165, 1500, 1858, 1951, 2193
Hpy8I GTNNAC 8 cut(s) 589, 711, 950, 1165, 1500, 1858, 1951, 2193
Hpy99I CGWCG 3 cut(s) 28, 145, 187
HpyAV CCTTC 7 cut(s) 553, 804, 1183, 1436, 2108, 2152, 2276
HpyCH4III ACNGT 8 cut(s) 187, 715, 766, 1246, 1345, 1772, 1862, 1948
HpyCH4IV ACGT 4 cut(s) 23, 530, 1025, 1044
HpyF3I CTNAG 6 cut(s) 219, 696, 890, 909, 2026, 2124
HpySE526I ACGT 4 cut(s) 23, 530, 1025, 1044
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 4 cut(s) 268, 1402, 1423, 1482
HspAI GCGC 4 cut(s) 14, 118, 268, 886
Kpn2I TCCGGA 1 cut(s) 1147
KroI GCCGGC 1 cut(s) 566
KroNI GCCGGC 1 cut(s) 568
KspAI GTTAAC 1 cut(s) 2193
KspI CCGCGG 1 cut(s) 2240
Kzo9I GATC 4 cut(s) 893, 1203, 2161, 2209
LweI GCATC 9 cut(s) 241, 952, 1193, 1591, 1628, 1716, 1971, 2211, 2242
MabI ACCWGGT 1 cut(s) 1307
MaeI CTAG 1 cut(s) 852
MaeII ACGT 4 cut(s) 23, 530, 1025, 1044
MaeIII GTNAC 4 cut(s) 610, 1132, 1642, 1886
MalI GATC 4 cut(s) 895, 1205, 2163, 2211
MbiI CCGCTC 1 cut(s) 172
MboI GATC 4 cut(s) 893, 1203, 2161, 2209
MfeI CAATTG 1 cut(s) 1995
MflI RGATCY 3 cut(s) 1203, 2161, 2209
MhlI GDGCHC 7 cut(s) 1147, 1155, 1575, 1953, 2013, 2022, 2246
MlsI TGGCCA 1 cut(s) 1942
MluNI TGGCCA 1 cut(s) 1942
MlyI GAGTC 4 cut(s) 533, 840, 1684, 1794
MmeI TCCRAC 2 cut(s) 123, 1281
Mox20I TGGCCA 1 cut(s) 1942
MroI TCCGGA 1 cut(s) 1147
MroNI GCCGGC 1 cut(s) 566
MroXI GAANNNNTTC 2 cut(s) 1514, 1563
MscI TGGCCA 1 cut(s) 1942
MseI TTAA 5 cut(s) 20, 920, 1293, 1811, 2192
MslI CAYNNNNRTG 3 cut(s) 594, 1424, 1651
Msp20I TGGCCA 1 cut(s) 1942
MspA1I CMGCKG 5 cut(s) 493, 753, 1052, 2123, 2239
MspI CCGG 5 cut(s) 499, 567, 1075, 1148, 1586
MspR9I CCNGG 5 cut(s) 500, 1075, 1157, 1309, 1587
MunI CAATTG 1 cut(s) 1995
Mva1269I GAATGC 1 cut(s) 568
MvaI CCWGG 2 cut(s) 1157, 1309
MvnI CGCG 2 cut(s) 118, 2239
NaeI GCCGGC 1 cut(s) 568
NciI CCSGG 3 cut(s) 500, 1075, 1587
NdeI CATATG 1 cut(s) 1636
NdeII GATC 4 cut(s) 893, 1203, 2161, 2209
NgoMIV GCCGGC 1 cut(s) 566
NlaIII CATG 4 cut(s) 268, 1402, 1423, 1482
NlaIV GGNNCC 6 cut(s) 488, 1146, 1152, 1313, 2163, 2211
NmeAIII GCCGAG 1 cut(s) 81
NmuCI GTSAC 2 cut(s) 610, 1642
NsbI TGCGCA 1 cut(s) 269
NspI RCATGY 1 cut(s) 1482
NspV TTCGAA 2 cut(s) 554, 1557
OliI CACNNNNGTG 1 cut(s) 594
PaeI GCATGC 1 cut(s) 1482
PagI TCATGA 1 cut(s) 1419
PceI AGGCCT 1 cut(s) 1281
PctI GAATGC 1 cut(s) 568
PdiI GCCGGC 1 cut(s) 568
PdmI GAANNNNTTC 2 cut(s) 1514, 1563
PfeI GAWTC 5 cut(s) 33, 1510, 1582, 2056, 2094
PflMI CCANNNNNTGG 1 cut(s) 1128
PleI GAGTC 4 cut(s) 533, 840, 1684, 1794
PpsI GAGTC 4 cut(s) 533, 840, 1684, 1794
Psp124BI GAGCTC 1 cut(s) 2022
Psp6I CCWGG 2 cut(s) 1155, 1307
PspEI GGTNACC 1 cut(s) 1132
PspFI CCCAGC 3 cut(s) 92, 192, 440
PspGI CCWGG 2 cut(s) 1155, 1307
PspN4I GGNNCC 6 cut(s) 488, 1146, 1152, 1313, 2163, 2211
PspPI GGNCC 4 cut(s) 487, 1170, 1336, 1656
PstI CTGCAG 2 cut(s) 758, 1090
PstNI CAGNNNCTG 1 cut(s) 1897
PsuI RGATCY 3 cut(s) 1203, 2161, 2209
PvuII CAGCTG 4 cut(s) 493, 753, 1052, 2123
RsaI GTAC 3 cut(s) 529, 1919, 2081
RsaNI GTAC 3 cut(s) 528, 1918, 2080
RseI CAYNNNNRTG 3 cut(s) 594, 1424, 1651
SacI GAGCTC 1 cut(s) 2022
SacII CCGCGG 1 cut(s) 2240
SaqAI TTAA 5 cut(s) 20, 920, 1293, 1811, 2192
Sau3AI GATC 4 cut(s) 893, 1203, 2161, 2209
Sau96I GGNCC 4 cut(s) 487, 1170, 1336, 1656
ScaI AGTACT 1 cut(s) 2081
SchI GAGTC 4 cut(s) 533, 840, 1684, 1794
ScrFI CCNGG 5 cut(s) 500, 1075, 1157, 1309, 1587
SduI GDGCHC 7 cut(s) 1147, 1155, 1575, 1953, 2013, 2022, 2246
SexAI ACCWGGT 1 cut(s) 1307
SfaNI GCATC 9 cut(s) 241, 952, 1193, 1591, 1628, 1716, 1971, 2211, 2242
SfcI CTRYAG 2 cut(s) 754, 1086
Sfr303I CCGCGG 1 cut(s) 2240
SfuI TTCGAA 2 cut(s) 554, 1557
SgrBI CCGCGG 1 cut(s) 2240
SinI GGWCC 3 cut(s) 487, 1336, 1656
SmiMI CAYNNNNRTG 3 cut(s) 594, 1424, 1651
SmlI CTYRAG 1 cut(s) 1568
SmoI CTYRAG 1 cut(s) 1568
SpeI ACTAGT 1 cut(s) 851
SphI GCATGC 1 cut(s) 1482
SseBI AGGCCT 1 cut(s) 1281
SsiI CCGC 8 cut(s) 116, 128, 172, 1684, 2030, 2086, 2237, 2239
SspI AATATT 1 cut(s) 2106
SspMI CTAG 1 cut(s) 852
SstI GAGCTC 1 cut(s) 2022
StuI AGGCCT 1 cut(s) 1281
StyD4I CCNGG 5 cut(s) 498, 1073, 1155, 1307, 1585
StyI CCWWGG 4 cut(s) 132, 841, 1437, 1971
TaaI ACNGT 8 cut(s) 187, 715, 766, 1246, 1345, 1772, 1862, 1948
TaiI ACGT 4 cut(s) 26, 533, 1028, 1047
TatI WGTACW 1 cut(s) 2079
TauI GCSGC 5 cut(s) 118, 131, 175, 2033, 2088
TfiI GAWTC 5 cut(s) 33, 1510, 1582, 2056, 2094
Tru1I TTAA 5 cut(s) 20, 920, 1293, 1811, 2192
Tru9I TTAA 5 cut(s) 20, 920, 1293, 1811, 2192
TseFI GTSAC 2 cut(s) 610, 1642
Tsp45I GTSAC 2 cut(s) 610, 1642
TspDTI ATGAA 9 cut(s) 253, 675, 812, 1208, 1387, 1618, 1755, 1923, 2199
TspGWI ACGGA 1 cut(s) 1874
Van91I CCANNNNNTGG 1 cut(s) 1128
VneI GTGCAC 1 cut(s) 1949
VpaK11BI GGWCC 3 cut(s) 487, 1336, 1656
XapI RAATTY 2 cut(s) 475, 1742
XceI RCATGY 1 cut(s) 1482
XcmI CCANNNNNNNNNTGG 2 cut(s) 532, 1216
XmnI GAANNNNTTC 2 cut(s) 1514, 1563
XspI CTAG 1 cut(s) 852
ZrmI AGTACT 1 cut(s) 2081
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.