Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000893

Physical Location & Seq

Genomic Coordinates Forward (+)

6366526 .. 6378108

Gene Structure 11583 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00083720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGCTCCTCTCTGCGCTTTTAACCTCAGTAGGAATTAATCTGGCTCTATGTTTGCTATACTCCACTCTCTACTCTATTCTGAGCAAGCAGCCCAGTAACGCCAAGGTTTATGCATCACGCTCTGTTGCTGCGAAAGAAGCGCCAACAGAAACAAATGGCTTCGATTTCGAAAGATTGTTGCCTACCGCGGGTTGGGTGAAACGGGCATGGCAGCCCTCTGAAGATCAGCTCTTGTCTGTCACCAGTTTGGATGCCGTGGTGTTCATTCGCATTTTCCTCTTCAGTTTGAAGGTGTTTGGGTTTGGTGGGATTATTGGGGTTTTTGTTCTTCTGCCAATAAACTTTCAGGGGACCCAGCTGGAGGAGGATTATTCGGATTTTTCCTACATGTCTTTGGACTCGTTTAGTATTTCAAATGTGGATGATGGCTCAAACTGGTTATGGGTTCATTTTTGTGCAGCATATATTTTCAGTGCAGCCGTCTGCTATCTTCTTTACGATGAGTACAGTTATATCTCATCAAGAAGAATTGCTCACTTCTATTCATCCAAACCTCAGCCTAATCAGTTCACAGTATTGGTTCGTGGTATTCCTGTCCTATCTGGGAGCAGCGGCAGTGAAACTGTTGACAGATTTTTTACAGAATATTACTCTTCTACTTATCTTTCACACTCGGTGGTTCGTCGAACTAGCAAACTCCAACGTCTCACTAGTGAAGCAGATAAGGTTTACAGAACGCTTGCCCGTCTAAAGTCAGAAAAGGATCCACAGCAAAGATTCAAGCGTGATGGGCTTTTTGGAAGCAAAGTTGATGGTTTGGATCACTATGGAAAGAAATTGGATGATTTAGAAGATACTGTTAGATTAGAGCAATCATCGTTGGCAGGAAAGGAAGTTTCAGCCGCCTTTGTGTCATTCAAGTCCCGGCTTGCTGCTGCAATAGCTGTAAACATTCAACAAGGAACAAATCCCACAGAGTGGGTCACAGAGGGCGCTCCTGAGCCTCAGGACGTTCATTGGCCCTTCTTTTCTTCATCTTTTATAAAAAGATGGGTCTCCAAGCTGGTGGTGGTGGTTGCATATGCTGCTGTTACAATTCTATTCCTCATTCCAGTTGCAATCGTGCAGGGCCTAACTAATCTTGAACAGTTAGAAACCTGGTTTCCTTTTCTCACAAGCGTACTGAATTTAACAGTCGTCAGTGAAGTCATAACTGGATATCTTCCAAGTCTTATTCTTCAGTTGTTTCTTTCTTTGGTGCCACCCATCATGATAGTGCTGTCATCCATGGAAGGATACTTCTCTTTCAGTCAGATACAAAAAGGTGCGTGCACGAAGATGTTGTGGTTTACTATATGGAACATTTTCCTTGCAAATGTACTATCAGGAACAGCTCTCTCTCAAGTCGATGTCCTTCTTGAGCCCAAAAAGATTCCTGGGCTACTTGCTGATGGTGTTCCAGCACAGGCATCATTCTTCATTGCATATGTTGTGACATCTGGATGGACCAGTACTGTATCATCAGAACTCTTCCGCTTGAAACCCCTGGTTTTCAGTATGATAAAAAGACTATTTTCAGGAAAGGATAGTGATGAATTTGAAGCTCCTTCAATTCCATACCACAAAGAAATTCCTAAAATTCTATTATTTGGACTCCTTGGAATCACATACTTCTTGCTGGCTCCATTAATTCTACCGTTCCTTCTGGTTTACTGTTGTATGGGATACCTAATCTTTCGCAACCAGCTATTGAATGTATATGCACCCAAGTATGAAACTGGTGGAAAACTTTGGCCTATAGTGCACAATTCAACAATATTTTCCTTGGTACTTATGCACATCATTGCGATTGGAATATTTGGGATTAAGACGCTTCCCTTAGCTGCTAGTTTGATGATTCCTCTTCCAATTCTCACTCTTCTTTTCAATGAGTACTGCCGCAAACGATTTCTACCGATATTCAAATCATATCCTGTTGAGTGTTTGGTAAAGAAAGATATTGAAGACCAGAGTGATCCTTCAATGGATGCATTTTATGATAAATTACGCACTGCGTATGAGGATCCGGTTTTGATGCCAATCCAACGTCGAAGAAGCAGAGATGGCTACAACTCTCCACTTCTTCCCCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

710

Amino Acids

79.81

Weight (kDa)

8.2

Isoelectric Point (pI)

45.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RSN1_TM	PF13967	5 - 168	1.5e-36	Late exocytosis, associated with Golgi transport
PHM7_cyt	PF14703	189 - 341	3e-35	Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM	PF02714	354 - 620	4.8e-75	Calcium-dependent channel, 7TM region, putative phosphate

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000893)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01100 AT3G01100 AT3G01100 AT3G01100
fragaria_vesca	FvH4_6g47900 FvH4_6g47900 FvH4_6g47900 FvH4_6g47900 FvH4_6g47900
malus_domestica	MD09G1055900.v1.1 MD17G1053500.v1.1
prunus_persica	Prupe.2G018200_v2.0.a1 Prupe.3G263100_v2.0.a1 Prupe.3G263100_v2.0.a1 Prupe.3G263100_v2.0.a1 Prupe.3G263100_v2.0.a1 Prupe.3G263100_v2.0.a1 Prupe.3G263100_v2.0.a1 Prupe.3G263100_v2.0.a1 Prupe.3G263100_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1 Prupe.3G263200_v2.0.a1
pyrus_communis	pycom111g04680
rosa_chinensis	RchiOBHm_Chr2g0167091 RchiOBHm_Chr2g0167101 RchiOBHm_Chr4g0405001
rosa_laevigata	RLG00000021696 RLG00000021697
rosa_multiflora	Rmu_co8240269.1_g000001 Rmu_sc0000528.1_g000018 Rmu_sc0007214.1_g000012 Rmu_sc0010966.1_g000019 Rmu_sc0033273.1_g000001
rosa_roxburghii	Rroxscaffold_2G00083720 Rroxscaffold_2G00083730 Rroxscaffold_4G00321490
rosa_rugosa	Rorug02G0528400.1 Rorug05G0232300 Rorug06G0073200
rosa_samantha	Rh2AG595400 Rh2AG595500 Rh2BG606400 Rh2BG606500 Rh2CG577400 Rh2CG577500 Rh2DG618100 Rh2DG618200 Rh4BG121800
rosa_wichuraiana	Rw2G049560 Rw2G049570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1043
AccB1I	GGYRCC	1 cut(s)	1258
AccB7I	CCANNNNNTGG	1 cut(s)	978
AccII	CGCG	1 cut(s)	188
AciI	CCGC	7 cut(s)	186, 188, 612, 903, 1534, 1939, 2128
AclWI	GGATC	6 cut(s)	758, 771, 828, 2009, 2057, 2070
AcsI	RAATTY	4 cut(s)	1186, 1595, 1629, 1638
AcuI	CTGAAG	3 cut(s)	240, 265, 1223
AdeI	CACNNNGTG	2 cut(s)	676, 978
AfaI	GTAC	6 cut(s)	506, 1182, 1380, 1513, 1830, 1934
AfiI	CCNNNNNNNGG	4 cut(s)	188, 192, 361, 978
AflIII	ACRYGT	1 cut(s)	387
AhlI	ACTAGT	1 cut(s)	710
AjnI	CCWGG	3 cut(s)	1157, 1435, 1545
AluBI	AGCT	8 cut(s)	229, 358, 944, 1063, 1394, 1604, 1747, 1883
AluI	AGCT	8 cut(s)	229, 358, 944, 1063, 1394, 1604, 1747, 1883
Alw21I	GWGCWC	2 cut(s)	1334, 1806
Alw26I	GTCTC	2 cut(s)	710, 1060
Alw44I	GTGCAC	2 cut(s)	1330, 1802
AlwI	GGATC	6 cut(s)	758, 771, 828, 2009, 2057, 2070
AoxI	GGCC	3 cut(s)	1019, 1129, 1793
ApaLI	GTGCAC	2 cut(s)	1330, 1802
ApoI	RAATTY	4 cut(s)	1186, 1595, 1629, 1638
AseI	ATTAAT	2 cut(s)	36, 1688
Asp700I	GAANNNNTTC	1 cut(s)	1364
AspLEI	GCGC	3 cut(s)	16, 142, 995
AspS9I	GGNCC	4 cut(s)	351, 1020, 1129, 1506
AsuC2I	CCSGG	1 cut(s)	925
AsuHPI	GGTGA	2 cut(s)	208, 232
AsuII	TTCGAA	1 cut(s)	168
AvaII	GGWCC	2 cut(s)	351, 1506
AxyI	CCTNAGG	1 cut(s)	1005
BaeGI	GKGCMC	2 cut(s)	1334, 1806
BamHI	GGATCC	2 cut(s)	763, 2062
BanI	GGYRCC	1 cut(s)	1258
BanII	GRGCYC	1 cut(s)	1425
BbsI	GAAGAC	1 cut(s)	2010
Bbv12I	GWGCWC	2 cut(s)	1334, 1806
BbvCI	CCTCAGC	1 cut(s)	555
BccI	CCATC	8 cut(s)	419, 782, 806, 1044, 1274, 1445, 1497, 2096
BceAI	ACGGC	2 cut(s)	239, 464
BciT130I	CCWGG	3 cut(s)	1159, 1437, 1547
BciVI	GTATCC	2 cut(s)	1289, 1718
BcnI	CCSGG	1 cut(s)	925
BcoDI	GTCTC	2 cut(s)	710, 1060
BcuI	ACTAGT	1 cut(s)	710
BfaI	CTAG	3 cut(s)	690, 711, 1887
BfmI	CTRYAG	1 cut(s)	1797
BfoI	RGCGCY	2 cut(s)	143, 996
BfuI	GTATCC	2 cut(s)	1289, 1718
BmcAI	AGTACT	2 cut(s)	1513, 1934
Bme1390I	CCNGG	4 cut(s)	925, 1159, 1437, 1547
Bme18I	GGWCC	2 cut(s)	351, 1506
BmgT120I	GGNCC	4 cut(s)	351, 1020, 1129, 1506
BmiI	GGNNCC	6 cut(s)	352, 353, 765, 1260, 1683, 2064
BmrFI	CCNGG	4 cut(s)	925, 1159, 1437, 1547
BmrI	ACTGGG	1 cut(s)	87
BmsI	GCATC	5 cut(s)	122, 241, 1478, 2017, 2064
BmuI	ACTGGG	1 cut(s)	87
BpiI	GAAGAC	1 cut(s)	2010
BpmI	CTGGAG	1 cut(s)	380
Bpu10I	CCTNAGC	3 cut(s)	555, 999, 1879
Bpu14I	TTCGAA	1 cut(s)	168
BpuEI	CTTGAG	2 cut(s)	1386, 1439
BpuMI	CCSGG	1 cut(s)	925
BsaBI	GATNNNNATC	1 cut(s)	2078
BsaI	GGTCTC	1 cut(s)	1060
BsaJI	CCNNGG	8 cut(s)	102, 186, 255, 1287, 1436, 1545, 1657, 1824
BsaWI	WCCGGW	1 cut(s)	2065
Bsc4I	CCNNNNNNNGG	4 cut(s)	188, 192, 361, 978
Bse1I	ACTGG	7 cut(s)	93, 243, 440, 1112, 1219, 1509, 1783
Bse21I	CCTNAGG	1 cut(s)	1005
Bse3DI	GCAATG	2 cut(s)	1479, 1842
Bse8I	GATNNNNATC	1 cut(s)	2078
BseBI	CCWGG	3 cut(s)	1159, 1437, 1547
BseDI	CCNNGG	8 cut(s)	102, 186, 255, 1287, 1436, 1545, 1657, 1824
BseGI	GGATG	7 cut(s)	256, 427, 545, 847, 1283, 1508, 2032
BseJI	GATNNNNATC	1 cut(s)	2078
BseLI	CCNNNNNNNGG	4 cut(s)	188, 192, 361, 978
BseMI	GCAATG	2 cut(s)	1479, 1842
BseMII	CTCAG	5 cut(s)	39, 71, 569, 990, 1019
BseNI	ACTGG	7 cut(s)	93, 243, 440, 1112, 1219, 1509, 1783
BseRI	GAGGAG	1 cut(s)	377
BseSI	GKGCMC	2 cut(s)	1334, 1806
BseYI	CCCAGC	1 cut(s)	354
BsgI	GTGCAG	3 cut(s)	477, 495, 1145
Bsh1236I	CGCG	1 cut(s)	188
BshFI	GGCC	3 cut(s)	1021, 1131, 1795
BshNI	GGYRCC	1 cut(s)	1258
BsiHKAI	GWGCWC	2 cut(s)	1334, 1806
BsiSI	CCGG	2 cut(s)	925, 2066
BslFI	GGGAC	2 cut(s)	364, 907
BslI	CCNNNNNNNGG	4 cut(s)	188, 192, 361, 978
BsmAI	GTCTC	2 cut(s)	710, 1060
BsmBI	CGTCTC	1 cut(s)	710
BsmFI	GGGAC	2 cut(s)	364, 907
BsnI	GGCC	3 cut(s)	1021, 1131, 1795
Bso31I	GGTCTC	1 cut(s)	1060
Bsp119I	TTCGAA	1 cut(s)	168
Bsp1286I	GDGCHC	3 cut(s)	1334, 1425, 1806
Bsp143I	GATC	5 cut(s)	223, 763, 820, 2014, 2062
Bsp19I	CCATGG	1 cut(s)	1287
BspACI	CCGC	7 cut(s)	186, 188, 612, 903, 1534, 1939, 2128
BspANI	GGCC	3 cut(s)	1021, 1131, 1795
BspCNI	CTCAG	5 cut(s)	38, 72, 568, 991, 1018
BspFNI	CGCG	1 cut(s)	188
BspHI	TCATGA	1 cut(s)	1269
BspLI	GGNNCC	6 cut(s)	352, 353, 765, 1260, 1683, 2064
BspPI	GGATC	6 cut(s)	758, 771, 828, 2009, 2057, 2070
BspT104I	TTCGAA	1 cut(s)	168
BspT107I	GGYRCC	1 cut(s)	1258
BspTNI	GGTCTC	1 cut(s)	1060
BsrDI	GCAATG	2 cut(s)	1479, 1842
BsrI	ACTGG	7 cut(s)	93, 243, 440, 1112, 1219, 1509, 1783
BssECI	CCNNGG	8 cut(s)	102, 186, 255, 1287, 1436, 1545, 1657, 1824
BssMI	GATC	5 cut(s)	223, 763, 820, 2014, 2062
BssT1I	CCWWGG	4 cut(s)	102, 1287, 1657, 1824
Bst2UI	CCWGG	3 cut(s)	1159, 1437, 1547
Bst4CI	ACNGT	9 cut(s)	509, 574, 625, 859, 1149, 1195, 1516, 1698, 1715
Bst6I	CTCTTC	5 cut(s)	284, 658, 1535, 1908, 1923
BstAPI	GCANNNNNTGC	1 cut(s)	1085
BstBI	TTCGAA	1 cut(s)	168
BstC8I	GCNNGC	5 cut(s)	86, 741, 930, 1330, 1680
BstDEI	CTNAG	6 cut(s)	25, 80, 555, 999, 1005, 1879
BstDSI	CCRYGG	3 cut(s)	186, 255, 1287
BstF5I	GGATG	7 cut(s)	256, 427, 545, 847, 1283, 1508, 2032
BstFNI	CGCG	1 cut(s)	188
BstH2I	RGCGCY	2 cut(s)	143, 996
BstHHI	GCGC	3 cut(s)	16, 142, 995
BstKTI	GATC	5 cut(s)	226, 766, 823, 2017, 2065
BstMAI	GTCTC	2 cut(s)	710, 1060
BstMBI	GATC	5 cut(s)	223, 763, 820, 2014, 2062
BstMWI	GCNNNNNNNGC	6 cut(s)	137, 790, 941, 1085, 1801, 2103
BstNI	CCWGG	3 cut(s)	1159, 1437, 1547
BstNSI	RCATGY	1 cut(s)	391
BstSCI	CCNGG	4 cut(s)	923, 1157, 1435, 1545
BstSFI	CTRYAG	1 cut(s)	1797
BstSLI	GKGCMC	2 cut(s)	1334, 1806
BstUI	CGCG	1 cut(s)	188
BstV2I	GAAGAC	1 cut(s)	2010
BstX2I	RGATCY	2 cut(s)	763, 2062
BstXI	CCANNNNNNTGG	1 cut(s)	1066
BstYI	RGATCY	2 cut(s)	763, 2062
Bsu36I	CCTNAGG	1 cut(s)	1005
BsuI	GTATCC	2 cut(s)	1289, 1718
BsuRI	GGCC	3 cut(s)	1021, 1131, 1795
BtgI	CCRYGG	3 cut(s)	186, 255, 1287
BtsCI	GGATG	7 cut(s)	256, 427, 545, 847, 1283, 1508, 2032
BtsI	GCAGTG	2 cut(s)	622, 2049
BtsIMutI	CAGTG	4 cut(s)	478, 622, 1207, 2049
Cac8I	GCNNGC	5 cut(s)	86, 741, 930, 1330, 1680
CciI	TCATGA	1 cut(s)	1269
CfoI	GCGC	3 cut(s)	16, 142, 995
Cfr13I	GGNCC	4 cut(s)	351, 1020, 1129, 1506
Cfr42I	CCGCGG	1 cut(s)	189
CseI	GACGC	1 cut(s)	1879
CsiI	ACCWGGT	1 cut(s)	1157
Csp6I	GTAC	6 cut(s)	505, 1181, 1379, 1512, 1829, 1933
CviAII	CATG	4 cut(s)	207, 388, 1270, 1288
CviQI	GTAC	6 cut(s)	505, 1181, 1379, 1512, 1829, 1933
DdeI	CTNAG	6 cut(s)	25, 80, 555, 999, 1005, 1879
DpnI	GATC	5 cut(s)	225, 765, 822, 2016, 2064
DpnII	GATC	5 cut(s)	223, 763, 820, 2014, 2062
DraIII	CACNNNGTG	2 cut(s)	676, 978
Eam1104I	CTCTTC	5 cut(s)	284, 658, 1535, 1908, 1923
EarI	CTCTTC	5 cut(s)	284, 658, 1535, 1908, 1923
Eco130I	CCWWGG	4 cut(s)	102, 1287, 1657, 1824
Eco24I	GRGCYC	1 cut(s)	1425
Eco31I	GGTCTC	1 cut(s)	1060
Eco32I	GATATC	1 cut(s)	1220
Eco47I	GGWCC	2 cut(s)	351, 1506
Eco57I	CTGAAG	3 cut(s)	240, 265, 1223
Eco81I	CCTNAGG	1 cut(s)	1005
EcoO109I	RGGNCCY	2 cut(s)	351, 1129
EcoRII	CCWGG	3 cut(s)	1157, 1435, 1545
EcoRV	GATATC	1 cut(s)	1220
EcoT14I	CCWWGG	4 cut(s)	102, 1287, 1657, 1824
EcoT22I	ATGCAT	2 cut(s)	115, 2032
EcoT38I	GRGCYC	1 cut(s)	1425
ErhI	CCWWGG	4 cut(s)	102, 1287, 1657, 1824
Esp3I	CGTCTC	1 cut(s)	710
FaeI	CATG	4 cut(s)	210, 391, 1273, 1291
FaqI	GGGAC	2 cut(s)	364, 907
FatI	CATG	4 cut(s)	206, 387, 1269, 1287
FauI	CCCGC	1 cut(s)	181
FauNDI	CATATG	2 cut(s)	1081, 1486
FokI	GGATG	7 cut(s)	263, 434, 532, 854, 1270, 1515, 2039
FriOI	GRGCYC	1 cut(s)	1425
FspBI	CTAG	3 cut(s)	690, 711, 1887
GlaI	GCGC	3 cut(s)	15, 141, 994
GsaI	CCCAGC	1 cut(s)	358
GsuI	CTGGAG	1 cut(s)	380
HaeII	RGCGCY	2 cut(s)	143, 996
HaeIII	GGCC	3 cut(s)	1021, 1131, 1795
HapII	CCGG	2 cut(s)	925, 2066
HgaI	GACGC	1 cut(s)	1879
HhaI	GCGC	3 cut(s)	16, 142, 995
Hin1II	CATG	4 cut(s)	210, 391, 1273, 1291
Hin6I	GCGC	3 cut(s)	14, 140, 993
HinP1I	GCGC	3 cut(s)	14, 140, 993
HincII	GTYRAC	1 cut(s)	628
HindII	GTYRAC	1 cut(s)	628
HinfI	GANTC	6 cut(s)	398, 777, 1432, 1653, 1662, 1897
HpaII	CCGG	2 cut(s)	925, 2066
HphI	GGTGA	2 cut(s)	208, 232
Hpy166II	GTNNAC	8 cut(s)	570, 628, 730, 949, 1332, 1350, 1711, 1804
Hpy188I	TCNGA	6 cut(s)	81, 220, 376, 757, 1314, 1525
Hpy188III	TCNNGA	9 cut(s)	522, 998, 1007, 1142, 1270, 1386, 1418, 1500, 1578
Hpy8I	GTNNAC	8 cut(s)	570, 628, 730, 949, 1332, 1350, 1711, 1804
Hpy99I	CGWCG	2 cut(s)	687, 2091
HpyAV	CCTTC	7 cut(s)	283, 1033, 1286, 1424, 1617, 1712, 2028
HpyCH4III	ACNGT	9 cut(s)	509, 574, 625, 859, 1149, 1195, 1516, 1698, 1715
HpyCH4IV	ACGT	3 cut(s)	703, 1011, 2086
HpyF10VI	GCNNNNNNNGC	6 cut(s)	137, 790, 941, 1085, 1801, 2103
HpyF3I	CTNAG	6 cut(s)	25, 80, 555, 999, 1005, 1879
HpySE526I	ACGT	3 cut(s)	703, 1011, 2086
Hsp92II	CATG	4 cut(s)	210, 391, 1273, 1291
HspAI	GCGC	3 cut(s)	14, 140, 993
KflI	GGGWCCC	1 cut(s)	351
KspI	CCGCGG	1 cut(s)	189
Kzo9I	GATC	5 cut(s)	223, 763, 820, 2014, 2062
LmnI	GCTCC	5 cut(s)	9, 606, 1000, 1609, 1687
LweI	GCATC	5 cut(s)	122, 241, 1478, 2017, 2064
MabI	ACCWGGT	1 cut(s)	1157
MaeI	CTAG	3 cut(s)	690, 711, 1887
MaeII	ACGT	3 cut(s)	703, 1011, 2086
MaeIII	GTNAC	5 cut(s)	95, 238, 982, 1090, 1492
MalI	GATC	5 cut(s)	225, 765, 822, 2016, 2064
MboI	GATC	5 cut(s)	223, 763, 820, 2014, 2062
MflI	RGATCY	2 cut(s)	763, 2062
MhlI	GDGCHC	3 cut(s)	1334, 1425, 1806
MlyI	GAGTC	2 cut(s)	392, 1647
MmeI	TCCRAC	2 cut(s)	724, 2107
Mph1103I	ATGCAT	2 cut(s)	115, 2032
MroXI	GAANNNNTTC	1 cut(s)	1364
MseI	TTAA	5 cut(s)	20, 36, 1190, 1688, 1866
MslI	CAYNNNNRTG	4 cut(s)	453, 1274, 1337, 1501
MspA1I	CMGCKG	4 cut(s)	188, 358, 612, 2130
MspI	CCGG	2 cut(s)	925, 2066
MspR9I	CCNGG	4 cut(s)	925, 1159, 1437, 1547
MvaI	CCWGG	3 cut(s)	1159, 1437, 1547
MvnI	CGCG	1 cut(s)	188
MwoI	GCNNNNNNNGC	6 cut(s)	137, 790, 941, 1085, 1801, 2103
NciI	CCSGG	1 cut(s)	925
NcoI	CCATGG	1 cut(s)	1287
NdeI	CATATG	2 cut(s)	1081, 1486
NdeII	GATC	5 cut(s)	223, 763, 820, 2014, 2062
NlaIII	CATG	4 cut(s)	210, 391, 1273, 1291
NlaIV	GGNNCC	6 cut(s)	352, 353, 765, 1260, 1683, 2064
NmuCI	GTSAC	3 cut(s)	238, 982, 1492
NsiI	ATGCAT	2 cut(s)	115, 2032
NspI	RCATGY	1 cut(s)	391
NspV	TTCGAA	1 cut(s)	168
PagI	TCATGA	1 cut(s)	1269
PciI	ACATGT	1 cut(s)	387
PdmI	GAANNNNTTC	1 cut(s)	1364
PfeI	GAWTC	4 cut(s)	777, 1432, 1662, 1897
PflMI	CCANNNNNTGG	1 cut(s)	978
PleI	GAGTC	2 cut(s)	392, 1647
PpsI	GAGTC	2 cut(s)	392, 1647
PpuMI	RGGWCCY	1 cut(s)	351
PscI	ACATGT	1 cut(s)	387
PshBI	ATTAAT	2 cut(s)	36, 1688
PsiI	TTATAA	1 cut(s)	1043
Psp5II	RGGWCCY	1 cut(s)	351
Psp6I	CCWGG	3 cut(s)	1157, 1435, 1545
PspFI	CCCAGC	1 cut(s)	354
PspGI	CCWGG	3 cut(s)	1157, 1435, 1545
PspN4I	GGNNCC	6 cut(s)	352, 353, 765, 1260, 1683, 2064
PspPI	GGNCC	4 cut(s)	351, 1020, 1129, 1506
PspPPI	RGGWCCY	1 cut(s)	351
PsuI	RGATCY	2 cut(s)	763, 2062
PvuII	CAGCTG	1 cut(s)	358
RsaI	GTAC	6 cut(s)	506, 1182, 1380, 1513, 1830, 1934
RsaNI	GTAC	6 cut(s)	505, 1181, 1379, 1512, 1829, 1933
RseI	CAYNNNNRTG	4 cut(s)	453, 1274, 1337, 1501
SacII	CCGCGG	1 cut(s)	189
SaqAI	TTAA	5 cut(s)	20, 36, 1190, 1688, 1866
Sau3AI	GATC	5 cut(s)	223, 763, 820, 2014, 2062
Sau96I	GGNCC	4 cut(s)	351, 1020, 1129, 1506
ScaI	AGTACT	2 cut(s)	1513, 1934
SchI	GAGTC	2 cut(s)	392, 1647
ScrFI	CCNGG	4 cut(s)	925, 1159, 1437, 1547
SduI	GDGCHC	3 cut(s)	1334, 1425, 1806
SexAI	ACCWGGT	1 cut(s)	1157
SfaNI	GCATC	5 cut(s)	122, 241, 1478, 2017, 2064
SfcI	CTRYAG	1 cut(s)	1797
Sfr303I	CCGCGG	1 cut(s)	189
SfuI	TTCGAA	1 cut(s)	168
SgrBI	CCGCGG	1 cut(s)	189
SinI	GGWCC	2 cut(s)	351, 1506
SmiMI	CAYNNNNRTG	4 cut(s)	453, 1274, 1337, 1501
SmlI	CTYRAG	2 cut(s)	1401, 1418
SmoI	CTYRAG	2 cut(s)	1401, 1418
SpeI	ACTAGT	1 cut(s)	710
SsiI	CCGC	7 cut(s)	186, 188, 612, 903, 1534, 1939, 2128
SspI	AATATT	3 cut(s)	647, 1818, 1857
SspMI	CTAG	3 cut(s)	690, 711, 1887
StyD4I	CCNGG	4 cut(s)	923, 1157, 1435, 1545
StyI	CCWWGG	4 cut(s)	102, 1287, 1657, 1824
TaaI	ACNGT	9 cut(s)	509, 574, 625, 859, 1149, 1195, 1516, 1698, 1715
TaiI	ACGT	3 cut(s)	706, 1014, 2089
TaqI	TCGA	5 cut(s)	162, 168, 685, 1407, 2089
TatI	WGTACW	4 cut(s)	504, 1378, 1511, 1932
TauI	GCSGC	3 cut(s)	615, 905, 1941
TfiI	GAWTC	4 cut(s)	777, 1432, 1662, 1897
Tru1I	TTAA	5 cut(s)	20, 36, 1190, 1688, 1866
Tru9I	TTAA	5 cut(s)	20, 36, 1190, 1688, 1866
TscAI	CASTG	4 cut(s)	478, 622, 1207, 2056
TseFI	GTSAC	3 cut(s)	238, 982, 1492
Tsp45I	GTSAC	3 cut(s)	238, 982, 1492
TspDTI	ATGAA	8 cut(s)	253, 437, 534, 1004, 1023, 1468, 1608, 1788
TspRI	CASTG	4 cut(s)	478, 622, 1207, 2056
Van91I	CCANNNNNTGG	1 cut(s)	978
VneI	GTGCAC	2 cut(s)	1330, 1802
VpaK11BI	GGWCC	2 cut(s)	351, 1506
VspI	ATTAAT	2 cut(s)	36, 1688
XapI	RAATTY	4 cut(s)	1186, 1595, 1629, 1638
XceI	RCATGY	1 cut(s)	391
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1066
XmnI	GAANNNNTTC	1 cut(s)	1364
XspI	CTAG	3 cut(s)	690, 711, 1887
ZrmI	AGTACT	2 cut(s)	1513, 1934
Zsp2I	ATGCAT	2 cut(s)	115, 2032

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.