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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G04235 AT2G04235 AT2G04235 AT2G04235 |
| fragaria_vesca | FvH4_6g40370 FvH4_6g40370 |
| malus_domestica | MD09G1131900.v1.1 MD09G1132300.v1.1 MD09G1132400.v1.1 MD17G1119600.v1.1 |
| prunus_persica | Prupe.3G194100_v2.0.a1 Prupe.3G194100_v2.0.a1 Prupe.3G194100_v2.0.a1 |
| pyrus_communis | pycom09g05380 pycom17g11000 |
| rosa_chinensis | RchiOBHm_Chr2g0155571 |
| rosa_laevigata | RLG00000020846 |
| rosa_multiflora | Rmu_co8276615.1_g000001 Rmu_sc0003439.1_g000001 Rmu_sc0003971.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00093640 |
| rosa_rugosa | Rorug02G0447700 Rorug02G0447800 Rorug02G0447900 Rorug02G0448000 |
| rosa_samantha | Rh2AG514400 Rh2BG525200 Rh2CG499300 Rh2DG534100 |
| rosa_wichuraiana | Rw2G042260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3078 |
| AarI | CACCTGC | 1 cut(s) | 1961 |
| Acc36I | ACCTGC | 2 cut(s) | 1228, 1961 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 830 |
| AccBSI | CCGCTC | 1 cut(s) | 3894 |
| AccI | GTMKAC | 3 cut(s) | 926, 1773, 3898 |
| AccII | CGCG | 3 cut(s) | 90, 138, 434 |
| AccIII | TCCGGA | 2 cut(s) | 160, 515 |
| AclWI | GGATC | 2 cut(s) | 331, 2722 |
| AcoI | YGGCCR | 4 cut(s) | 396, 868, 1051, 3517 |
| AcuI | CTGAAG | 8 cut(s) | 626, 968, 1125, 1175, 2126, 3024, 3078, 3887 |
| AfaI | GTAC | 5 cut(s) | 1251, 1843, 2719, 3147, 3574 |
| AfeI | AGCGCT | 1 cut(s) | 80 |
| AflII | CTTAAG | 3 cut(s) | 1265, 3154, 3358 |
| AflIII | ACRYGT | 1 cut(s) | 3452 |
| AjiI | CACGTC | 1 cut(s) | 3778 |
| AjnI | CCWGG | 7 cut(s) | 334, 412, 1408, 1755, 2208, 2338, 3795 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 849, 881, 2212, 2244 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2983, 3015 |
| Alw21I | GWGCWC | 1 cut(s) | 3795 |
| Alw26I | GTCTC | 6 cut(s) | 32, 1760, 2394, 3018, 3180, 3224 |
| Alw44I | GTGCAC | 1 cut(s) | 3791 |
| AlwI | GGATC | 2 cut(s) | 331, 2722 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 803, 1034, 2531, 3184, 3381, 3575 |
| Ama87I | CYCGRG | 1 cut(s) | 4013 |
| Aor13HI | TCCGGA | 2 cut(s) | 160, 515 |
| Aor51HI | AGCGCT | 1 cut(s) | 80 |
| ApaI | GGGCCC | 1 cut(s) | 3584 |
| ApaLI | GTGCAC | 1 cut(s) | 3791 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 365, 397 |
| AseI | ATTAAT | 1 cut(s) | 1940 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1188, 2352, 2698 |
| AspA2I | CCTAGG | 1 cut(s) | 2689 |
| AspLEI | GCGC | 4 cut(s) | 81, 2272, 3410, 4009 |
| AsuC2I | CCSGG | 3 cut(s) | 215, 351, 3402 |
| AsuII | TTCGAA | 2 cut(s) | 198, 2356 |
| AvaI | CYCGRG | 1 cut(s) | 4013 |
| AvaII | GGWCC | 6 cut(s) | 163, 1217, 1306, 1335, 2560, 2962 |
| AvrII | CCTAGG | 1 cut(s) | 2689 |
| AxyI | CCTNAGG | 1 cut(s) | 2261 |
| BaeGI | GKGCMC | 2 cut(s) | 3584, 3795 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 682, 715 |
| BalI | TGGCCA | 3 cut(s) | 870, 1053, 3519 |
| BanII | GRGCYC | 3 cut(s) | 27, 356, 3584 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1820, 1852 |
| BbsI | GAAGAC | 2 cut(s) | 572, 639 |
| Bbv12I | GWGCWC | 1 cut(s) | 3795 |
| BbvCI | CCTCAGC | 2 cut(s) | 1797, 3687 |
| BccI | CCATC | 9 cut(s) | 625, 1043, 1321, 1402, 1520, 2004, 2597, 2702, 3853 |
| BceAI | ACGGC | 1 cut(s) | 555 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2926, 2960, 3782, 3816 |
| BciT130I | CCWGG | 7 cut(s) | 336, 414, 1410, 1757, 2210, 2340, 3797 |
| BciVI | GTATCC | 2 cut(s) | 460, 2705 |
| BclI | TGATCA | 1 cut(s) | 3496 |
| BcnI | CCSGG | 3 cut(s) | 215, 351, 3402 |
| BcoDI | GTCTC | 6 cut(s) | 32, 1760, 2394, 3018, 3180, 3224 |
| BfaI | CTAG | 7 cut(s) | 809, 1479, 2564, 2598, 2690, 3219, 3773 |
| BfmI | CTRYAG | 4 cut(s) | 471, 2116, 3993, 4041 |
| BfoI | RGCGCY | 3 cut(s) | 82, 2273, 4010 |
| BfrI | CTTAAG | 3 cut(s) | 1265, 3154, 3358 |
| BfuAI | ACCTGC | 2 cut(s) | 1228, 1961 |
| BfuI | GTATCC | 2 cut(s) | 460, 2705 |
| BglII | AGATCT | 2 cut(s) | 523, 1612 |
| BlnI | CCTAGG | 1 cut(s) | 2689 |
| BlpI | GCTNAGC | 1 cut(s) | 3852 |
| Bme18I | GGWCC | 6 cut(s) | 163, 1217, 1306, 1335, 2560, 2962 |
| BmeT110I | CYCGRG | 1 cut(s) | 4013 |
| BmgBI | CACGTC | 1 cut(s) | 3778 |
| BmiI | GGNNCC | 5 cut(s) | 165, 1336, 1414, 3581, 3582 |
| BmrI | ACTGGG | 2 cut(s) | 2244, 3585 |
| BmuI | ACTGGG | 2 cut(s) | 2244, 3585 |
| BpiI | GAAGAC | 2 cut(s) | 572, 639 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 65, 97, 510, 542, 2162, 2194, 3135, 3167 |
| BpmI | CTGGAG | 1 cut(s) | 2485 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1494, 1797, 3687 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3852 |
| Bpu14I | TTCGAA | 2 cut(s) | 198, 2356 |
| BpuEI | CTTGAG | 3 cut(s) | 512, 2458, 3425 |
| BpuMI | CCSGG | 3 cut(s) | 215, 351, 3402 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2460, 3249 |
| BsaI | GGTCTC | 3 cut(s) | 32, 1760, 2394 |
| BsaJI | CCNNGG | 8 cut(s) | 335, 432, 1118, 2208, 2364, 2689, 3544, 3951 |
| BsaWI | WCCGGW | 4 cut(s) | 46, 160, 515, 2153 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1804, 1834 |
| Bse1I | ACTGG | 5 cut(s) | 1743, 2239, 2511, 3010, 3580 |
| Bse21I | CCTNAGG | 1 cut(s) | 2261 |
| Bse3DI | GCAATG | 2 cut(s) | 1165, 1723 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2460, 3249 |
| BseAI | TCCGGA | 2 cut(s) | 160, 515 |
| BseBI | CCWGG | 7 cut(s) | 336, 414, 1410, 1757, 2210, 2340, 3797 |
| BseDI | CCNNGG | 8 cut(s) | 335, 432, 1118, 2208, 2364, 2689, 3544, 3951 |
| BseGI | GGATG | 8 cut(s) | 116, 1394, 1837, 2593, 2713, 2997, 3198, 3658 |
| BseJI | GATNNNNATC | 2 cut(s) | 2460, 3249 |
| BseMI | GCAATG | 2 cut(s) | 1165, 1723 |
| BseNI | ACTGG | 5 cut(s) | 1743, 2239, 2511, 3010, 3580 |
| BseRI | GAGGAG | 1 cut(s) | 534 |
| BseSI | GKGCMC | 2 cut(s) | 3584, 3795 |
| BseYI | CCCAGC | 2 cut(s) | 2552, 3583 |
| BsgI | GTGCAG | 2 cut(s) | 2064, 2541 |
| Bsh1236I | CGCG | 3 cut(s) | 90, 138, 434 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3795 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4013 |
| BsiSI | CCGG | 7 cut(s) | 47, 161, 215, 350, 516, 2154, 3401 |
| BslFI | GGGAC | 7 cut(s) | 248, 638, 1966, 2268, 2346, 2427, 2631 |
| BsmAI | GTCTC | 6 cut(s) | 32, 1760, 2394, 3018, 3180, 3224 |
| BsmFI | GGGAC | 7 cut(s) | 248, 638, 1966, 2268, 2346, 2427, 2631 |
| BsmI | GAATGC | 2 cut(s) | 2073, 2098 |
| Bso31I | GGTCTC | 3 cut(s) | 32, 1760, 2394 |
| BsoBI | CYCGRG | 1 cut(s) | 4013 |
| Bsp119I | TTCGAA | 2 cut(s) | 198, 2356 |
| Bsp120I | GGGCCC | 1 cut(s) | 3580 |
| Bsp1286I | GDGCHC | 4 cut(s) | 27, 356, 3584, 3795 |
| Bsp13I | TCCGGA | 2 cut(s) | 160, 515 |
| Bsp1407I | TGTACA | 1 cut(s) | 2717 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3852 |
| Bsp19I | CCATGG | 1 cut(s) | 3544 |
| BspEI | TCCGGA | 2 cut(s) | 160, 515 |
| BspFNI | CGCG | 3 cut(s) | 90, 138, 434 |
| BspHI | TCATGA | 2 cut(s) | 451, 2572 |
| BspLI | GGNNCC | 5 cut(s) | 165, 1336, 1414, 3581, 3582 |
| BspMAI | CTGCAG | 3 cut(s) | 2120, 3997, 4045 |
| BspMI | ACCTGC | 2 cut(s) | 1228, 1961 |
| BspPI | GGATC | 2 cut(s) | 331, 2722 |
| BspQI | GCTCTTC | 1 cut(s) | 1785 |
| BspT104I | TTCGAA | 2 cut(s) | 198, 2356 |
| BspTI | CTTAAG | 3 cut(s) | 1265, 3154, 3358 |
| BspTNI | GGTCTC | 3 cut(s) | 32, 1760, 2394 |
| BsrBI | CCGCTC | 1 cut(s) | 3894 |
| BsrDI | GCAATG | 2 cut(s) | 1165, 1723 |
| BsrGI | TGTACA | 1 cut(s) | 2717 |
| BsrI | ACTGG | 5 cut(s) | 1743, 2239, 2511, 3010, 3580 |
| BssECI | CCNNGG | 8 cut(s) | 335, 432, 1118, 2208, 2364, 2689, 3544, 3951 |
| BssT1I | CCWWGG | 4 cut(s) | 1118, 2364, 2689, 3544 |
| Bst2UI | CCWGG | 7 cut(s) | 336, 414, 1410, 1757, 2210, 2340, 3797 |
| Bst4CI | ACNGT | 6 cut(s) | 420, 1771, 1841, 2422, 2717, 3611 |
| Bst6I | CTCTTC | 2 cut(s) | 555, 1785 |
| BstAFI | CTTAAG | 3 cut(s) | 1265, 3154, 3358 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 764, 3112 |
| BstAUI | TGTACA | 1 cut(s) | 2717 |
| BstBI | TTCGAA | 2 cut(s) | 198, 2356 |
| BstC8I | GCNNGC | 3 cut(s) | 772, 789, 2917 |
| BstDSI | CCRYGG | 2 cut(s) | 432, 3544 |
| BstEII | GGTNACC | 1 cut(s) | 634 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2037, 2972 |
| BstF5I | GGATG | 8 cut(s) | 116, 1394, 1837, 2593, 2713, 2997, 3198, 3658 |
| BstFNI | CGCG | 3 cut(s) | 90, 138, 434 |
| BstH2I | RGCGCY | 3 cut(s) | 82, 2273, 4010 |
| BstHHI | GCGC | 4 cut(s) | 81, 2272, 3410, 4009 |
| BstMAI | GTCTC | 6 cut(s) | 32, 1760, 2394, 3018, 3180, 3224 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 87, 93, 249, 764, 909, 1495, 3112, 3121 |
| BstNI | CCWGG | 7 cut(s) | 336, 414, 1410, 1757, 2210, 2340, 3797 |
| BstNSI | RCATGY | 4 cut(s) | 206, 791, 1810, 3456 |
| BstPI | GGTNACC | 1 cut(s) | 634 |
| BstSFI | CTRYAG | 4 cut(s) | 471, 2116, 3993, 4041 |
| BstSLI | GKGCMC | 2 cut(s) | 3584, 3795 |
| BstUI | CGCG | 3 cut(s) | 90, 138, 434 |
| BstV2I | GAAGAC | 2 cut(s) | 572, 639 |
| BstX2I | RGATCY | 2 cut(s) | 523, 1612 |
| BstYI | RGATCY | 2 cut(s) | 523, 1612 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2261 |
| BsuI | GTATCC | 2 cut(s) | 460, 2705 |
| BtgI | CCRYGG | 2 cut(s) | 432, 3544 |
| BtrI | CACGTC | 1 cut(s) | 3778 |
| BtsCI | GGATG | 8 cut(s) | 116, 1394, 1837, 2593, 2713, 2997, 3198, 3658 |
| BtsI | GCAGTG | 4 cut(s) | 3379, 3755, 3915, 4002 |
| BtsIMutI | CAGTG | 5 cut(s) | 2529, 3379, 3755, 3915, 4002 |
| BveI | ACCTGC | 2 cut(s) | 1228, 1961 |
| Cac8I | GCNNGC | 3 cut(s) | 772, 789, 2917 |
| CaiI | CAGNNNCTG | 6 cut(s) | 803, 1034, 2531, 3184, 3381, 3575 |
| CciI | TCATGA | 2 cut(s) | 451, 2572 |
| CfoI | GCGC | 4 cut(s) | 81, 2272, 3410, 4009 |
| Cfr42I | CCGCGG | 1 cut(s) | 435 |
| CsiI | ACCWGGT | 1 cut(s) | 1408 |
| Csp6I | GTAC | 5 cut(s) | 1250, 1842, 2718, 3146, 3573 |
| CviQI | GTAC | 5 cut(s) | 1250, 1842, 2718, 3146, 3573 |
| EaeI | YGGCCR | 4 cut(s) | 396, 868, 1051, 3517 |
| Eam1104I | CTCTTC | 2 cut(s) | 555, 1785 |
| EarI | CTCTTC | 2 cut(s) | 555, 1785 |
| Eco130I | CCWWGG | 4 cut(s) | 1118, 2364, 2689, 3544 |
| Eco24I | GRGCYC | 3 cut(s) | 27, 356, 3584 |
| Eco31I | GGTCTC | 3 cut(s) | 32, 1760, 2394 |
| Eco47I | GGWCC | 6 cut(s) | 163, 1217, 1306, 1335, 2560, 2962 |
| Eco47III | AGCGCT | 1 cut(s) | 80 |
| Eco57I | CTGAAG | 8 cut(s) | 626, 968, 1125, 1175, 2126, 3024, 3078, 3887 |
| Eco81I | CCTNAGG | 1 cut(s) | 2261 |
| Eco88I | CYCGRG | 1 cut(s) | 4013 |
| Eco91I | GGTNACC | 1 cut(s) | 634 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2037, 2972 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2560, 3580 |
| EcoO65I | GGTNACC | 1 cut(s) | 634 |
| EcoRI | GAATTC | 4 cut(s) | 1530, 1573, 2662, 3638 |
| EcoRII | CCWGG | 7 cut(s) | 334, 412, 1408, 1755, 2208, 2338, 3795 |
| EcoT14I | CCWWGG | 4 cut(s) | 1118, 2364, 2689, 3544 |
| EcoT22I | ATGCAT | 5 cut(s) | 489, 789, 1114, 1837, 2100 |
| EcoT38I | GRGCYC | 3 cut(s) | 27, 356, 3584 |
| ErhI | CCWWGG | 4 cut(s) | 1118, 2364, 2689, 3544 |
| FaqI | GGGAC | 7 cut(s) | 248, 638, 1966, 2268, 2346, 2427, 2631 |
| FauI | CCCGC | 3 cut(s) | 92, 763, 2294 |
| FauNDI | CATATG | 1 cut(s) | 2110 |
| FbaI | TGATCA | 1 cut(s) | 3496 |
| FblI | GTMKAC | 3 cut(s) | 926, 1773, 3898 |
| FokI | GGATG | 8 cut(s) | 103, 1381, 1844, 2580, 2720, 3004, 3185, 3665 |
| FriOI | GRGCYC | 3 cut(s) | 27, 356, 3584 |
| FspBI | CTAG | 7 cut(s) | 809, 1479, 2564, 2598, 2690, 3219, 3773 |
| GlaI | GCGC | 4 cut(s) | 80, 2271, 3409, 4008 |
| GsaI | CCCAGC | 2 cut(s) | 2556, 3587 |
| GsuI | CTGGAG | 1 cut(s) | 2485 |
| HaeII | RGCGCY | 3 cut(s) | 82, 2273, 4010 |
| HapII | CCGG | 7 cut(s) | 47, 161, 215, 350, 516, 2154, 3401 |
| HhaI | GCGC | 4 cut(s) | 81, 2272, 3410, 4009 |
| Hin6I | GCGC | 4 cut(s) | 79, 2270, 3408, 4007 |
| HinP1I | GCGC | 4 cut(s) | 79, 2270, 3408, 4007 |
| HincII | GTYRAC | 4 cut(s) | 1143, 1522, 1762, 2487 |
| HindII | GTYRAC | 4 cut(s) | 1143, 1522, 1762, 2487 |
| HindIII | AAGCTT | 4 cut(s) | 1696, 3333, 3355, 3869 |
| HpaI | GTTAAC | 2 cut(s) | 1143, 1762 |
| HpaII | CCGG | 7 cut(s) | 47, 161, 215, 350, 516, 2154, 3401 |
| Hpy99I | CGWCG | 5 cut(s) | 143, 257, 293, 296, 2685 |
| HpyCH4III | ACNGT | 6 cut(s) | 420, 1771, 1841, 2422, 2717, 3611 |
| HpyCH4IV | ACGT | 2 cut(s) | 3552, 3777 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 87, 93, 249, 764, 909, 1495, 3112, 3121 |
| HpySE526I | ACGT | 2 cut(s) | 3552, 3777 |
| HspAI | GCGC | 4 cut(s) | 79, 2270, 3408, 4007 |
| Kpn2I | TCCGGA | 2 cut(s) | 160, 515 |
| Ksp22I | TGATCA | 1 cut(s) | 3496 |
| KspAI | GTTAAC | 2 cut(s) | 1143, 1762 |
| KspI | CCGCGG | 1 cut(s) | 435 |
| LguI | GCTCTTC | 1 cut(s) | 1785 |
| LmnI | GCTCC | 3 cut(s) | 86, 2084, 3325 |
| MabI | ACCWGGT | 1 cut(s) | 1408 |
| MaeI | CTAG | 7 cut(s) | 809, 1479, 2564, 2598, 2690, 3219, 3773 |
| MaeII | ACGT | 2 cut(s) | 3552, 3777 |
| MbiI | CCGCTC | 1 cut(s) | 3894 |
| MfeI | CAATTG | 1 cut(s) | 318 |
| MflI | RGATCY | 2 cut(s) | 523, 1612 |
| MhlI | GDGCHC | 4 cut(s) | 27, 356, 3584, 3795 |
| MlsI | TGGCCA | 3 cut(s) | 870, 1053, 3519 |
| MluNI | TGGCCA | 3 cut(s) | 870, 1053, 3519 |
| MmeI | TCCRAC | 3 cut(s) | 33, 2243, 2650 |
| Mox20I | TGGCCA | 3 cut(s) | 870, 1053, 3519 |
| Mph1103I | ATGCAT | 5 cut(s) | 489, 789, 1114, 1837, 2100 |
| MroI | TCCGGA | 2 cut(s) | 160, 515 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1188, 2352, 2698 |
| MscI | TGGCCA | 3 cut(s) | 870, 1053, 3519 |
| MslI | CAYNNNNRTG | 5 cut(s) | 723, 818, 1745, 2598, 3240 |
| Msp20I | TGGCCA | 3 cut(s) | 870, 1053, 3519 |
| MspA1I | CMGCKG | 6 cut(s) | 434, 770, 1031, 1876, 2168, 4046 |
| MspCI | CTTAAG | 3 cut(s) | 1265, 3154, 3358 |
| MspI | CCGG | 7 cut(s) | 47, 161, 215, 350, 516, 2154, 3401 |
| MunI | CAATTG | 1 cut(s) | 318 |
| Mva1269I | GAATGC | 2 cut(s) | 2073, 2098 |
| MvaI | CCWGG | 7 cut(s) | 336, 414, 1410, 1757, 2210, 2340, 3797 |
| MvnI | CGCG | 3 cut(s) | 90, 138, 434 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 87, 93, 249, 764, 909, 1495, 3112, 3121 |
| NciI | CCSGG | 3 cut(s) | 215, 351, 3402 |
| NcoI | CCATGG | 1 cut(s) | 3544 |
| NdeI | CATATG | 1 cut(s) | 2110 |
| NlaIV | GGNNCC | 5 cut(s) | 165, 1336, 1414, 3581, 3582 |
| NmeAIII | GCCGAG | 1 cut(s) | 232 |
| NmuCI | GTSAC | 4 cut(s) | 245, 1387, 3910, 4017 |
| NsiI | ATGCAT | 5 cut(s) | 489, 789, 1114, 1837, 2100 |
| NspI | RCATGY | 4 cut(s) | 206, 791, 1810, 3456 |
| NspV | TTCGAA | 2 cut(s) | 198, 2356 |
| PaeI | GCATGC | 1 cut(s) | 791 |
| PagI | TCATGA | 2 cut(s) | 451, 2572 |
| PaqCI | CACCTGC | 1 cut(s) | 1961 |
| PciI | ACATGT | 1 cut(s) | 3452 |
| PciSI | GCTCTTC | 1 cut(s) | 1785 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 105, 147, 204 |
| PctI | GAATGC | 2 cut(s) | 2073, 2098 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1188, 2352, 2698 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 830 |
| PfoI | TCCNGGA | 1 cut(s) | 2338 |
| PpuMI | RGGWCCY | 1 cut(s) | 2560 |
| PscI | ACATGT | 1 cut(s) | 3452 |
| PshBI | ATTAAT | 1 cut(s) | 1940 |
| PsiI | TTATAA | 1 cut(s) | 3078 |
| Psp5II | RGGWCCY | 1 cut(s) | 2560 |
| Psp6I | CCWGG | 7 cut(s) | 334, 412, 1408, 1755, 2208, 2338, 3795 |
| PspEI | GGTNACC | 1 cut(s) | 634 |
| PspFI | CCCAGC | 2 cut(s) | 2552, 3583 |
| PspGI | CCWGG | 7 cut(s) | 334, 412, 1408, 1755, 2208, 2338, 3795 |
| PspN4I | GGNNCC | 5 cut(s) | 165, 1336, 1414, 3581, 3582 |
| PspOMI | GGGCCC | 1 cut(s) | 3580 |
| PspPPI | RGGWCCY | 1 cut(s) | 2560 |
| PstI | CTGCAG | 3 cut(s) | 2120, 3997, 4045 |
| PstNI | CAGNNNCTG | 6 cut(s) | 803, 1034, 2531, 3184, 3381, 3575 |
| PsuI | RGATCY | 2 cut(s) | 523, 1612 |
| PvuII | CAGCTG | 4 cut(s) | 1031, 1876, 2168, 4046 |
| RsaI | GTAC | 5 cut(s) | 1251, 1843, 2719, 3147, 3574 |
| RsaNI | GTAC | 5 cut(s) | 1250, 1842, 2718, 3146, 3573 |
| RseI | CAYNNNNRTG | 5 cut(s) | 723, 818, 1745, 2598, 3240 |
| SacII | CCGCGG | 1 cut(s) | 435 |
| SapI | GCTCTTC | 1 cut(s) | 1785 |
| SduI | GDGCHC | 4 cut(s) | 27, 356, 3584, 3795 |
| SexAI | ACCWGGT | 1 cut(s) | 1408 |
| SfcI | CTRYAG | 4 cut(s) | 471, 2116, 3993, 4041 |
| Sfr303I | CCGCGG | 1 cut(s) | 435 |
| SfuI | TTCGAA | 2 cut(s) | 198, 2356 |
| SgrBI | CCGCGG | 1 cut(s) | 435 |
| SinI | GGWCC | 6 cut(s) | 163, 1217, 1306, 1335, 2560, 2962 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 723, 818, 1745, 2598, 3240 |
| SmlI | CTYRAG | 6 cut(s) | 527, 1265, 2473, 3154, 3358, 3440 |
| SmoI | CTYRAG | 6 cut(s) | 527, 1265, 2473, 3154, 3358, 3440 |
| SphI | GCATGC | 1 cut(s) | 791 |
| SspI | AATATT | 1 cut(s) | 750 |
| SspMI | CTAG | 7 cut(s) | 809, 1479, 2564, 2598, 2690, 3219, 3773 |
| StyI | CCWWGG | 4 cut(s) | 1118, 2364, 2689, 3544 |
| TaaI | ACNGT | 6 cut(s) | 420, 1771, 1841, 2422, 2717, 3611 |
| TaiI | ACGT | 2 cut(s) | 3555, 3780 |
| TaqI | TCGA | 7 cut(s) | 198, 1235, 1352, 2356, 2383, 3024, 3802 |
| TaqII | GACCGA | 1 cut(s) | 56 |
| TatI | WGTACW | 3 cut(s) | 1841, 2717, 3145 |
| TauI | GCSGC | 2 cut(s) | 90, 437 |
| TscAI | CASTG | 5 cut(s) | 2536, 3386, 3762, 3915, 4002 |
| TseFI | GTSAC | 4 cut(s) | 245, 1387, 3910, 4017 |
| Tsp45I | GTSAC | 4 cut(s) | 245, 1387, 3910, 4017 |
| TspGWI | ACGGA | 3 cut(s) | 109, 1029, 2628 |
| TspRI | CASTG | 5 cut(s) | 2536, 3386, 3762, 3915, 4002 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 830 |
| Vha464I | CTTAAG | 3 cut(s) | 1265, 3154, 3358 |
| VneI | GTGCAC | 1 cut(s) | 3791 |
| VpaK11BI | GGWCC | 6 cut(s) | 163, 1217, 1306, 1335, 2560, 2962 |
| VspI | ATTAAT | 1 cut(s) | 1940 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2037, 2972 |
| XceI | RCATGY | 4 cut(s) | 206, 791, 1810, 3456 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 878 |
| XmaJI | CCTAGG | 1 cut(s) | 2689 |
| XmiI | GTMKAC | 3 cut(s) | 926, 1773, 3898 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1188, 2352, 2698 |
| XspI | CTAG | 7 cut(s) | 809, 1479, 2564, 2598, 2690, 3219, 3773 |
| Zsp2I | ATGCAT | 5 cut(s) | 489, 789, 1114, 1837, 2100 |