Rw2G042260

No description available

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
68557287 .. 68565517
8231 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G042260.1

Sequence Viewer

Length: 3951 bp
ATGGCCTCCAAGACCCCCGACGAGCCTTGCATCTCCGAGACCGAGGTCGAGACAATAGCCATGAGAATCAAGAGGAAACGCTCCCGGCGCGTGAGCTTCGCCGACACCGAGATCACCTCCGTCCACATATTCAACCGCGACGACGAGGACTCCGACAACGCTCCCGACTCCGAACTCCAGTCCAGCTCTCTAAACGACTCCGCCGAGCCGGATAATGGTGCCGTAGGGTTTTTCAAGGATGTCGGCGGCGAAAGCGACGATTTCAAGGATTCCGATGACGACGAGGACGACGACGGAGTCGATGGGAGGAAGTCGTTTTTGAGACCGCTCGGTTCGCCTTCTCCGATGAGTAGCGTTCCTGGCTCTGCTACCTCCAACAACGAAGAAGATTTCTTTGGTCCTGTATCAGCAGATTTCATTAGACCCGGACTATCTGATTCTGCAGCCTCAGATAGCTTTCATGAAACTACAATGGACACCACCGTGTTTTCATTGCATTATCGTAGTCTTGCAAGGTCAGACTTTGGAGGAGATCTCAAGACCCCAACATCTTTTCGCCTTGCCTTTGAAGAAAAGACACCAACCCCTAACCCCAGTGATTCAGGAAGTCTTATGTCTCTAACGAAACCAAAGAATCTAACTCCTCAGTCTTCGGTTCCTGTTGATAAGGTCAGAGGCGGTGAAGATTCGAATGACATGAGTATTATAGAAGAGAACCCACATAGGTATGATTATGGAAGACTATCTCCTGAATTAGATGCACTTTTGGCAGAAGGTAGCAAGGATTTGCATGCTGACTCAATTACTGCCTCTATTAGCAAAATGCCATCCAAGAGAAGTGAGGTTACTGTGTTGGAAAAAAATGGAATTGGCCACATGGATCTAAGAGATGGTAGGAGTACTGAAATGGGCAATTTTGGCACTCATGAGATGTCCACTGACCCAGCATCTATTTCTCGTATCAAGTTGAGTGAGGCAATTGGTGTGGTTGCTGGTGACTCCATTGACGACCAAATCTGGACTCCAAATCAGTTAATGAAGGTCAGTAACGAACTCACTAAAGATCTATTTCAAAAGGGTATGGAGAGTTTAGAGTTACCTGCTGCGAATGGAGACCTTGTAGCAAATGTCAATAGTAAAGCAACTAAAGCTCTAGAAAATTCTCCCAAGGACAGAAGATATAATACTAATATTGATCCTCATTCTGATAAGGAGGGGTCCAGATTCATGTTATCTGCTAGAGGACAGCAGTCAATTATGAATACTCCTAATTTAGCAAGACATTCAGGGACAGTAACTCCTTCCTCAAAACATAAAGATTGGTATCCAGCAATTCAGAAAAGCATTTCCAGGTTAAGAATTCCAGAGCCTTCTCCCCGTGCTTCTAGTCTCAAAGATGGAATTGAGAAATTAAGATGTAGATTGTCAAGTCACTCATCCCCAAATGCTCCTTTAAGTACTGTTATGGCTGACATTAGCAAAGATCTACAACGTGACTTTAACAAATCTCCTACTGCTTTTTTGGAGAAGCAAGTAGGTGATCTGGAGAAGGGGGGACAGAAGAGTTTGGTTAACACAGGTACACATGACAATGAGAACCCAGTTAACATCCGTAAGTTGGGGAAGGATGAAAATTCCACAGACACTGCAAAAGATGAAGCATCTCTGAACATGTTTGCAGACATTCTTTTGAAGGATAAACTTGACAGACCAATAGAAGAAGTGGCTCCACCCTCTCAGCTGTCAGTATCTGGAAGTGAAATGACCCAGCATCTCTTGATGTCAGAATATAACACAAAAGGAACAATGGTTTCTTCTGGAACTGATTGCCTATTGGCAGATGAGCGAGAAGAGAATCTTCCCCATGTGCAACTTCAATCAGAAAATAACTTCGAAACTCCTTTAAGTGGTGCAGGCATTCTGAACATTCAATTGCAAAGTCCAGATAAAAGATTTCAACCTGGACTAGAACCCCAGTCTAAACCATATGTCTCAAGAAGTATGACTGAACCATCCCTTCAGTGCCCTCCCCCTAAAGACTCAGCTCTGAGCAACTCCATGGAAGGGCCATCTAAGAGTCCACCCAGGAAAAGGCAAACTCCAAGTCCTCCCTTGAGAAATACCCCTCGGAGTCACCTCAGGGAAGAGCCAAGTCAGAGTCCCTACAGGAAAGAAACAGCTAGGAGTCCTTCCAGGAAAAACCTTACTGAGAGTCTTTCTTGGAAAGAGCCAATTCAGCCGTTCATAGAAGAGCTTATTGGTAGTCCCATAGAGAAAGAGCCGAACCATAGTCTCTTTCTGAAAGAGCCGAACCATAGTCTCTTTCTGAAAGAGCTAACACTAAGCCCCTTCAGGCCATCTTATGCAGAACACATAGATACTATGGGACCTGTTGGGAAAGACATGGTATCTTCTGAGCTAAATTCAAATAATCATCCTAATGATGATTGTTATGAGGGACTACATATTTCACAGAGTCCTCTAACCAAACAAGATGCAGATAATTCTTTTGGACGTAAAAGAAGAAACCTAGGCATAACTCTCCAGGATGGAGACTGTACAGATAAGATCCCCGACAGCCAGAGAAGTTCTAAAATTCATAGAAGTGAGAACTATGATCTCCAGTTCACGTTGGGTCATGCAAGTACACTTCACGGTGACAGAGAGAAGTATGGCGGTGAATTGGGTGGTGGTGCAATTTGGGAGAGCTGGACTGATATTCTAGTCAAATTCTCAGGAGATTCAGAACAGTTGCTTTCTCCATTGACAAGCAACCTAAATTTAAAAGCGATTGGGGTGGTGGAAGATATCTTGATACATCTATTGAAGGCTAAAAAGTATGAGACGCTCTGTGCTGAAATCGAATCTCAGAAGGTCAACTGCATCAGTGCTGGGCATAAAAGGGTAGCTGAAGCAAGGTTGCTGCTTTATAGATTAGCGAATGAAAAGGCAAAGTTGCAGTTAATGCATTTGAAGCAGCAGAAATTACAGAGTAGGGTGCAGCTCTTAAGCTCTGCAGTTCAGGAGTCTCAAATGCTGAAGTTGAACTTCATCCAGTGTCAGTCCGAAGCTGGTAAAGGAGAGACTCTTGTTGATGAGAGTCGGTCATGTTTAGTTAATCATGTGGGTGAACAAGAGGCTTCCTGTGATAATGTGAGCACAATGAGACAAGAGCTTAGAGCTTCAGATGAGAAAATAAAAAGTTTAAGCAAATTTTTTCACTCTCATATCAAGTTCAAAGGAGAACCAAGTTACGCCAACACTATTGCACTAGTTCATGATCATCTGAAGACAAGAACCTTCTGCAAGTTAATACGTCAGGAGTTACAGTCATGGGATGTTGATGAATTTGAGATTAAGAATGGTCATTACAACATTCTTCTCAGCTATCATGGTTACATCATTCAAAGGTTTACTGGTAATATGGGTCCAACATCACGCATAGTCATCTCAAAAAAGTTGAATAATGTAAAGATCATGAAGGCCTTCCCGAACATAGATGCCCTAGTTGCATTTGATTTTGTGCTAGATGCTGAGGCCACCAGAGAAATGTTTGATTCAAGATGTTTGGCGGAAGAAACACAAGTTACCCGTTCACAGCTATGTAATCTGCTAGACGTGGCTGAGGAAGTGCAGCTGGCTCGATTTGAGATTGTAAATTTGATCCAGACAAGCTTTCATACTCCATCCGATGATCAGCTTGACCTGCAGCTTTGTTTCCTTAATTGTAAGAGCAGTAGAAAGGTCACACTGTCTCTCGATATGACATGTTTGAAGAGGGGGGTTTATCCTTCAGAGATCCTTCCATATCAGATACAGGCTTTTGAATCTGCAGCACGAGTGTTGCTTCCACAGTCGCTCTTAACTGAAATAAGAGCTGCAGCAGAGGGTCTTGAACCTGGATCCACAAGGATAATGAGGCTCTGTAAATGTATTTCCCAGGTGGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1316

Amino Acids

146.12

Weight (kDa)

5.55

Isoelectric Point (pI)

58.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 296
Acc36I ACCTGC 2 cut(s) 1108, 3714
AccB1I GGYRCC 1 cut(s) 218
AccBSI CCGCTC 1 cut(s) 328
AccII CGCG 2 cut(s) 90, 138
AciI CCGC 7 cut(s) 136, 201, 246, 326, 678, 2676, 3572
AclWI GGATC 7 cut(s) 888, 1190, 2563, 3658, 3793, 3897, 3910
AcoI YGGCCR 1 cut(s) 871
AcuI CTGAAG 7 cut(s) 2003, 2335, 2931, 3059, 3168, 3308, 3777
AfaI GTAC 5 cut(s) 901, 1459, 1582, 2560, 2647
AfiI CCNNNNNNNGG 5 cut(s) 215, 1618, 1907, 2064, 2091
AflII CTTAAG 1 cut(s) 3007
AflIII ACRYGT 2 cut(s) 1671, 3767
AhlI ACTAGT 1 cut(s) 3271
AjiI CACGTC 1 cut(s) 3619
AjnI CCWGG 8 cut(s) 358, 1349, 1960, 2084, 2192, 2544, 3898, 3939
AjuI GAANNNNNNNTTGG 4 cut(s) 378, 410, 2241, 2273
AleI CACNNNNGTG 1 cut(s) 482
Alw21I GWGCWC 1 cut(s) 3161
AlwI GGATC 7 cut(s) 888, 1190, 2563, 3658, 3793, 3897, 3910
AlwNI CAGNNNCTG 2 cut(s) 1646, 1751
AoxI GGCC 6 cut(s) 3, 871, 2066, 2354, 3483, 3537
ArsI GACNNNNNNTTYG 2 cut(s) 2089, 2121
Asp700I GAANNNNTTC 1 cut(s) 3485
AspA2I CCTAGG 1 cut(s) 2530
AspLEI GCGC 1 cut(s) 90
AspS9I GGNCC 5 cut(s) 398, 1218, 2066, 2387, 3428
AsuC2I CCSGG 2 cut(s) 85, 426
AsuHPI GGTGA 8 cut(s) 106, 692, 1007, 1550, 2126, 2669, 2690, 3140
AsuII TTCGAA 2 cut(s) 689, 1893
AvaII GGWCC 4 cut(s) 398, 1218, 2387, 3428
AvrII CCTAGG 1 cut(s) 2530
AxyI CCTNAGG 1 cut(s) 2138
BaeGI GKGCMC 1 cut(s) 2027
BalI TGGCCA 1 cut(s) 873
BamHI GGATCC 1 cut(s) 3902
BanI GGYRCC 1 cut(s) 218
BarI GAAGNNNNNNTAC 4 cut(s) 829, 861, 1168, 1200
BauI CACGAG 1 cut(s) 3837
BbsI GAAGAC 3 cut(s) 642, 745, 3296
Bbv12I GWGCWC 1 cut(s) 3161
BbvCI CCTCAGC 2 cut(s) 3534, 3624
BccI CCATC 9 cut(s) 296, 835, 884, 1391, 2020, 2077, 2365, 2543, 3694
BceAI ACGGC 2 cut(s) 206, 2224
BcgI CGANNNNNNTGC 2 cut(s) 3623, 3657
BciT130I CCWGG 8 cut(s) 360, 1351, 1962, 2086, 2194, 2546, 3900, 3941
BciVI GTATCC 1 cut(s) 1335
BclI TGATCA 2 cut(s) 3280, 3694
BcnI CCSGG 2 cut(s) 85, 426
BcuI ACTAGT 1 cut(s) 3271
BfmI CTRYAG 6 cut(s) 441, 2164, 3015, 3707, 3831, 3879
BfrI CTTAAG 1 cut(s) 3007
BfuAI ACCTGC 2 cut(s) 1108, 3714
BfuI GTATCC 1 cut(s) 1335
BglII AGATCT 3 cut(s) 532, 1063, 1483
BlnI CCTAGG 1 cut(s) 2530
BmcAI AGTACT 2 cut(s) 901, 1459
Bme18I GGWCC 4 cut(s) 398, 1218, 2387, 3428
BmgBI CACGTC 1 cut(s) 3619
BmgT120I GGNCC 5 cut(s) 398, 1218, 2066, 2387, 3428
BmiI GGNNCC 7 cut(s) 220, 657, 1219, 1728, 2388, 3429, 3904
BmrI ACTGGG 3 cut(s) 588, 1595, 1969
BmsI GCATC 9 cut(s) 39, 748, 956, 1670, 1780, 2485, 2892, 3490, 3520
BmuI ACTGGG 3 cut(s) 588, 1595, 1969
BoxI GACNNNNGTC 2 cut(s) 44, 1249
BpiI GAAGAC 3 cut(s) 642, 745, 3296
BplI GAGNNNNNCTC 4 cut(s) 101, 133, 519, 551
BpmI CTGGAG 4 cut(s) 161, 1565, 2528, 2606
Bpu10I CCTNAGC 2 cut(s) 3534, 3624
Bpu14I TTCGAA 2 cut(s) 689, 1893
BpuEI CTTGAG 3 cut(s) 521, 1978, 2134
BpuMI CCSGG 2 cut(s) 85, 426
BsaBI GATNNNNATC 1 cut(s) 1323
BsaI GGTCTC 3 cut(s) 32, 316, 1107
BsaJI CCNNGG 7 cut(s) 42, 1167, 2058, 2084, 2126, 2530, 3939
BsaXI ACNNNNNCTCC 8 cut(s) 134, 164, 1104, 1134, 1282, 1312, 3314, 3344
Bsc4I CCNNNNNNNGG 5 cut(s) 215, 1618, 1907, 2064, 2091
Bse1I ACTGG 7 cut(s) 178, 594, 1601, 1975, 2623, 3055, 3421
Bse21I CCTNAGG 1 cut(s) 2138
Bse3DI GCAATG 1 cut(s) 491
Bse8I GATNNNNATC 1 cut(s) 1323
BseBI CCWGG 8 cut(s) 360, 1351, 1962, 2086, 2194, 2546, 3900, 3941
BseDI CCNNGG 7 cut(s) 42, 1167, 2058, 2084, 2126, 2530, 3939
BseJI GATNNNNATC 1 cut(s) 1323
BseLI CCNNNNNNNGG 5 cut(s) 215, 1618, 1907, 2064, 2091
BseMI GCAATG 1 cut(s) 491
BseNI ACTGG 7 cut(s) 178, 594, 1601, 1975, 2623, 3055, 3421
BseRI GAGGAG 2 cut(s) 543, 633
BseSI GKGCMC 1 cut(s) 2027
BseYI CCCAGC 3 cut(s) 943, 1767, 2891
BsgI GTGCAG 3 cut(s) 1932, 3020, 3653
Bsh1236I CGCG 2 cut(s) 90, 138
BshFI GGCC 6 cut(s) 5, 873, 2068, 2356, 3485, 3539
BshNI GGYRCC 1 cut(s) 218
BsiHKAI GWGCWC 1 cut(s) 3161
BsiSI CCGG 3 cut(s) 85, 209, 426
BslFI GGGAC 6 cut(s) 1303, 1569, 2145, 2250, 2400, 2472
BslI CCNNNNNNNGG 5 cut(s) 215, 1618, 1907, 2064, 2091
BsmBI CGTCTC 1 cut(s) 2837
BsmFI GGGAC 6 cut(s) 1303, 1569, 2145, 2250, 2400, 2472
BsmI GAATGC 1 cut(s) 1917
BsnI GGCC 6 cut(s) 5, 873, 2068, 2356, 3485, 3539
Bso31I GGTCTC 3 cut(s) 32, 316, 1107
Bsp119I TTCGAA 2 cut(s) 689, 1893
Bsp1286I GDGCHC 2 cut(s) 2027, 3161
Bsp1407I TGTACA 1 cut(s) 2558
Bsp19I CCATGG 1 cut(s) 2058
BspACI CCGC 7 cut(s) 136, 201, 246, 326, 678, 2676, 3572
BspANI GGCC 6 cut(s) 5, 873, 2068, 2356, 3485, 3539
BspFNI CGCG 2 cut(s) 90, 138
BspHI TCATGA 4 cut(s) 460, 925, 3277, 3477
BspLI GGNNCC 7 cut(s) 220, 657, 1219, 1728, 2388, 3429, 3904
BspMAI CTGCAG 5 cut(s) 445, 3019, 3711, 3835, 3883
BspMI ACCTGC 2 cut(s) 1108, 3714
BspPI GGATC 7 cut(s) 888, 1190, 2563, 3658, 3793, 3897, 3910
BspQI GCTCTTC 2 cut(s) 2139, 2244
BspT104I TTCGAA 2 cut(s) 689, 1893
BspT107I GGYRCC 1 cut(s) 218
BspTI CTTAAG 1 cut(s) 3007
BspTNI GGTCTC 3 cut(s) 32, 316, 1107
BsrBI CCGCTC 1 cut(s) 328
BsrDI GCAATG 1 cut(s) 491
BsrGI TGTACA 1 cut(s) 2558
BsrI ACTGG 7 cut(s) 178, 594, 1601, 1975, 2623, 3055, 3421
BssECI CCNNGG 7 cut(s) 42, 1167, 2058, 2084, 2126, 2530, 3939
BssSI CACGAG 1 cut(s) 3837
BssT1I CCWWGG 3 cut(s) 1167, 2058, 2530
Bst2BI CACGAG 1 cut(s) 3837
Bst2UI CCWGG 8 cut(s) 360, 1351, 1962, 2086, 2194, 2546, 3900, 3941
Bst6I CTCTTC 6 cut(s) 705, 1556, 1845, 2139, 2244, 3770
BstAFI CTTAAG 1 cut(s) 3007
BstAPI GCANNNNNTGC 1 cut(s) 2965
BstAUI TGTACA 1 cut(s) 2558
BstBI TTCGAA 2 cut(s) 689, 1893
BstC8I GCNNGC 3 cut(s) 792, 1915, 3639
BstDSI CCRYGG 1 cut(s) 2058
BstFNI CGCG 2 cut(s) 90, 138
BstHHI GCGC 1 cut(s) 90
BstNI CCWGG 8 cut(s) 360, 1351, 1962, 2086, 2194, 2546, 3900, 3941
BstNSI RCATGY 3 cut(s) 794, 1675, 3771
BstPAI GACNNNNGTC 2 cut(s) 44, 1249
BstSFI CTRYAG 6 cut(s) 441, 2164, 3015, 3707, 3831, 3879
BstSLI GKGCMC 1 cut(s) 2027
BstUI CGCG 2 cut(s) 90, 138
BstV2I GAAGAC 3 cut(s) 642, 745, 3296
BstX2I RGATCY 7 cut(s) 532, 880, 1063, 1483, 2568, 3798, 3902
BstYI RGATCY 7 cut(s) 532, 880, 1063, 1483, 2568, 3798, 3902
Bsu36I CCTNAGG 1 cut(s) 2138
BsuI GTATCC 1 cut(s) 1335
BsuRI GGCC 6 cut(s) 5, 873, 2068, 2356, 3485, 3539
BtgI CCRYGG 1 cut(s) 2058
BtrI CACGTC 1 cut(s) 3619
BtsI GCAGTG 1 cut(s) 1644
BtsIMutI CAGTG 7 cut(s) 601, 936, 1644, 2027, 2893, 3062, 3749
BveI ACCTGC 2 cut(s) 1108, 3714
Cac8I GCNNGC 3 cut(s) 792, 1915, 3639
CaiI CAGNNNCTG 2 cut(s) 1646, 1751
CciI TCATGA 4 cut(s) 460, 925, 3277, 3477
CfoI GCGC 1 cut(s) 90
Cfr13I GGNCC 5 cut(s) 398, 1218, 2066, 2387, 3428
CseI GACGC 1 cut(s) 2854
Csp6I GTAC 5 cut(s) 900, 1458, 1581, 2559, 2646
CspCI CAANNNNNGTGG 2 cut(s) 966, 1001
CviQI GTAC 5 cut(s) 900, 1458, 1581, 2559, 2646
DraI TTTAAA 1 cut(s) 2784
DrdI GACNNNNNNGTC 1 cut(s) 296
DseDI GACNNNNNNGTC 1 cut(s) 296
EaeI YGGCCR 1 cut(s) 871
Eam1104I CTCTTC 6 cut(s) 705, 1556, 1845, 2139, 2244, 3770
EarI CTCTTC 6 cut(s) 705, 1556, 1845, 2139, 2244, 3770
EciI GGCGGA 2 cut(s) 190, 3587
Eco130I CCWWGG 3 cut(s) 1167, 2058, 2530
Eco147I AGGCCT 1 cut(s) 3485
Eco31I GGTCTC 3 cut(s) 32, 316, 1107
Eco32I GATATC 1 cut(s) 2809
Eco47I GGWCC 4 cut(s) 398, 1218, 2387, 3428
Eco57I CTGAAG 7 cut(s) 2003, 2335, 2931, 3059, 3168, 3308, 3777
Eco81I CCTNAGG 1 cut(s) 2138
EcoO109I RGGNCCY 1 cut(s) 2387
EcoRI GAATTC 1 cut(s) 1359
EcoRII CCWGG 8 cut(s) 358, 1349, 1960, 2084, 2192, 2544, 3898, 3939
EcoRV GATATC 1 cut(s) 2809
EcoT14I CCWWGG 3 cut(s) 1167, 2058, 2530
EcoT22I ATGCAT 1 cut(s) 2970
ErhI CCWWGG 3 cut(s) 1167, 2058, 2530
Esp3I CGTCTC 1 cut(s) 2837
FalI AAGNNNNNCTT 4 cut(s) 1842, 1874, 3032, 3064
FaqI GGGAC 6 cut(s) 1303, 1569, 2145, 2250, 2400, 2472
FauNDI CATATG 1 cut(s) 1987
FbaI TGATCA 2 cut(s) 3280, 3694
GlaI GCGC 1 cut(s) 89
GsaI CCCAGC 3 cut(s) 947, 1771, 2895
GsuI CTGGAG 4 cut(s) 161, 1565, 2528, 2606
HaeIII GGCC 6 cut(s) 5, 873, 2068, 2356, 3485, 3539
HapII CCGG 3 cut(s) 85, 209, 426
HgaI GACGC 1 cut(s) 2854
HhaI GCGC 1 cut(s) 90
Hin6I GCGC 1 cut(s) 88
HinP1I GCGC 1 cut(s) 88
HincII GTYRAC 3 cut(s) 1573, 1606, 2878
HindII GTYRAC 3 cut(s) 1573, 1606, 2878
HindIII AAGCTT 1 cut(s) 3673
HpaI GTTAAC 2 cut(s) 1573, 1606
HpaII CCGG 3 cut(s) 85, 209, 426
HphI GGTGA 8 cut(s) 106, 692, 1007, 1550, 2126, 2669, 2690, 3140
Hpy99I CGWCG 7 cut(s) 23, 143, 146, 260, 284, 293, 296
HpyCH4IV ACGT 5 cut(s) 1492, 2515, 2630, 3316, 3618
HpySE526I ACGT 5 cut(s) 1492, 2515, 2630, 3316, 3618
HspAI GCGC 1 cut(s) 88
Ksp22I TGATCA 2 cut(s) 3280, 3694
KspAI GTTAAC 2 cut(s) 1573, 1606
LguI GCTCTTC 2 cut(s) 2139, 2244
LmnI GCTCC 4 cut(s) 86, 166, 1453, 1732
LweI GCATC 9 cut(s) 39, 748, 956, 1670, 1780, 2485, 2892, 3490, 3520
MaeII ACGT 5 cut(s) 1492, 2515, 2630, 3316, 3618
MbiI CCGCTC 1 cut(s) 328
MfeI CAATTG 2 cut(s) 978, 1931
MflI RGATCY 7 cut(s) 532, 880, 1063, 1483, 2568, 3798, 3902
MhlI GDGCHC 2 cut(s) 2027, 3161
MlsI TGGCCA 1 cut(s) 873
MluNI TGGCCA 1 cut(s) 873
MmeI TCCRAC 4 cut(s) 177, 399, 834, 3455
Mox20I TGGCCA 1 cut(s) 873
Mph1103I ATGCAT 1 cut(s) 2970
MroXI GAANNNNTTC 1 cut(s) 3485
MscI TGGCCA 1 cut(s) 873
MslI CAYNNNNRTG 7 cut(s) 482, 726, 1590, 2439, 2604, 3126, 3601
Msp20I TGGCCA 1 cut(s) 873
MspA1I CMGCKG 2 cut(s) 1741, 3637
MspCI CTTAAG 1 cut(s) 3007
MspI CCGG 3 cut(s) 85, 209, 426
MunI CAATTG 2 cut(s) 978, 1931
Mva1269I GAATGC 1 cut(s) 1917
MvaI CCWGG 8 cut(s) 360, 1351, 1962, 2086, 2194, 2546, 3900, 3941
MvnI CGCG 2 cut(s) 90, 138
NciI CCSGG 2 cut(s) 85, 426
NcoI CCATGG 1 cut(s) 2058
NdeI CATATG 1 cut(s) 1987
NlaIV GGNNCC 7 cut(s) 220, 657, 1219, 1728, 2388, 3429, 3904
NmeAIII GCCGAG 1 cut(s) 229
NmuCI GTSAC 6 cut(s) 995, 1430, 1493, 2132, 2657, 3745
NsiI ATGCAT 1 cut(s) 2970
NspI RCATGY 3 cut(s) 794, 1675, 3771
NspV TTCGAA 2 cut(s) 689, 1893
OliI CACNNNNGTG 1 cut(s) 482
PaeI GCATGC 1 cut(s) 794
PagI TCATGA 4 cut(s) 460, 925, 3277, 3477
PceI AGGCCT 1 cut(s) 3485
PciI ACATGT 2 cut(s) 1671, 3767
PciSI GCTCTTC 2 cut(s) 2139, 2244
PcsI WCGNNNNNNNCGW 7 cut(s) 105, 150, 201, 285, 288, 297, 341
PctI GAATGC 1 cut(s) 1917
PdmI GAANNNNTTC 1 cut(s) 3485
PflFI GACNNNGTC 1 cut(s) 296
PfoI TCCNGGA 2 cut(s) 2192, 2544
PpuMI RGGWCCY 1 cut(s) 2387
PscI ACATGT 2 cut(s) 1671, 3767
PshAI GACNNNNGTC 2 cut(s) 44, 1249
Psp5II RGGWCCY 1 cut(s) 2387
Psp6I CCWGG 8 cut(s) 358, 1349, 1960, 2084, 2192, 2544, 3898, 3939
PspFI CCCAGC 3 cut(s) 943, 1767, 2891
PspGI CCWGG 8 cut(s) 358, 1349, 1960, 2084, 2192, 2544, 3898, 3939
PspN4I GGNNCC 7 cut(s) 220, 657, 1219, 1728, 2388, 3429, 3904
PspPI GGNCC 5 cut(s) 398, 1218, 2066, 2387, 3428
PspPPI RGGWCCY 1 cut(s) 2387
PstI CTGCAG 5 cut(s) 445, 3019, 3711, 3835, 3883
PstNI CAGNNNCTG 2 cut(s) 1646, 1751
PsuI RGATCY 7 cut(s) 532, 880, 1063, 1483, 2568, 3798, 3902
PsyI GACNNNGTC 1 cut(s) 296
PvuII CAGCTG 2 cut(s) 1741, 3637
RsaI GTAC 5 cut(s) 901, 1459, 1582, 2560, 2647
RsaNI GTAC 5 cut(s) 900, 1458, 1581, 2559, 2646
RseI CAYNNNNRTG 7 cut(s) 482, 726, 1590, 2439, 2604, 3126, 3601
SapI GCTCTTC 2 cut(s) 2139, 2244
Sau96I GGNCC 5 cut(s) 398, 1218, 2066, 2387, 3428
ScaI AGTACT 2 cut(s) 901, 1459
SduI GDGCHC 2 cut(s) 2027, 3161
SfaNI GCATC 9 cut(s) 39, 748, 956, 1670, 1780, 2485, 2892, 3490, 3520
SfcI CTRYAG 6 cut(s) 441, 2164, 3015, 3707, 3831, 3879
SfuI TTCGAA 2 cut(s) 689, 1893
SinI GGWCC 4 cut(s) 398, 1218, 2387, 3428
SmiMI CAYNNNNRTG 7 cut(s) 482, 726, 1590, 2439, 2604, 3126, 3601
SmlI CTYRAG 4 cut(s) 536, 1993, 2113, 3007
SmoI CTYRAG 4 cut(s) 536, 1993, 2113, 3007
SpeI ACTAGT 1 cut(s) 3271
SphI GCATGC 1 cut(s) 794
SseBI AGGCCT 1 cut(s) 3485
SsiI CCGC 7 cut(s) 136, 201, 246, 326, 678, 2676, 3572
SspI AATATT 1 cut(s) 1192
StuI AGGCCT 1 cut(s) 3485
StyI CCWWGG 3 cut(s) 1167, 2058, 2530
TaiI ACGT 5 cut(s) 1495, 2518, 2633, 3319, 3621
TaqI TCGA 7 cut(s) 48, 300, 689, 1893, 2862, 3643, 3759
TaqII GACCGA 2 cut(s) 56, 3093
TatI WGTACW 4 cut(s) 899, 1457, 2558, 2645
TauI GCSGC 1 cut(s) 249
TscAI CASTG 7 cut(s) 601, 943, 1651, 2027, 2893, 3062, 3756
TseFI GTSAC 6 cut(s) 995, 1430, 1493, 2132, 2657, 3745
Tsp45I GTSAC 6 cut(s) 995, 1430, 1493, 2132, 2657, 3745
TspGWI ACGGA 3 cut(s) 109, 309, 1601
TspRI CASTG 7 cut(s) 601, 943, 1651, 2027, 2893, 3062, 3756
Tth111I GACNNNGTC 1 cut(s) 296
Vha464I CTTAAG 1 cut(s) 3007
VpaK11BI GGWCC 4 cut(s) 398, 1218, 2387, 3428
XbaI TCTAGA 1 cut(s) 1153
XceI RCATGY 3 cut(s) 794, 1675, 3771
XmaJI CCTAGG 1 cut(s) 2530
XmnI GAANNNNTTC 1 cut(s) 3485
ZrmI AGTACT 2 cut(s) 901, 1459
Zsp2I ATGCAT 1 cut(s) 2970
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.