Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005008

Physical Location & Seq

Genomic Coordinates Reverse (-)

57439325 .. 57454603

Gene Structure 15279 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0447900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGTCTACCTTTAACCATGGTGCTGGGCGGCATTTCCAGCATACAGGAATAAATATGGGAGCTCGGGCATTTACAGGTGATAGCCTGAGTACCGAAAAGATGGGAAGTGCAGTTGGGAGTGCAATCCCGGAGAAGTCTGGAATGCACAGGCTAGGAGGAATCGTCGGCAACGATGGTGGCGATTCTGGCGGAGGAGTCGAAGCGGCGCTCGCGGCGGACGTCATCCTCGATTTCTTGTTGGACGCGGCGGCGCTGGTGTTGTTCCACCGCGAGAATCAGACCTCCGTGGGCGGGCGCATCTGGAGAGGGTTGTGGGCCGGGTTCGGGTTTAGGTTCACCGGTGGCGTGAAAATGAGGCACGAAGTCGAGACAGCGCTTTGTCCTTGGTTTGATGAAGCATCAATTCGAAGAAGAAGAAGAAGAAGAAGAAAGAAAGAAAGACATGGCAATTCCAAACCCAAGTTTGGCATGAAGATGGGTGTGCTTGGTCCTTGGCTTCTGTGCGGGTTGCTCTTGCTCCTTTCCATAGTTGAAGGCCATGTTCATTACTATGACTTTGTACTCAAGGAGGCCAACTTTACAAGGTTATGTAATACTAAGAGCATGCTAGTAGTCAACGATAGTTTTCCTGGACCGACCATTCGCGTGCAGAAAGGAGACACCGTCTATGTCAATGTCCAAAACCAAGGAGACTATGGCCTTACTATTCACTGGCATGGAGTACATCAACCAAGAAATCCGTGGTCAGATGGTCCAGAATATGTCACACAATGTCCTATTGAGCCTAAAACAAATTTCACTTATGAGGTTATATTTTCTGATGAGGAAGGAACACTATGGTGGCATGCCCATAGTGATTGGACTAGAGCTAGTGTCCATGGTGCCATTGTTGTTATGCCCTTAGAAGAGACAGGTTTTCCATTTGCTGAGCCCGATGGAGAAGAAATAATCATATTTGGATCTTGGTATTTAACTGAACGTCTGAACGAGGTGGTTACTGAGGATGTCGAAGAAGGTCTTGACACTCCTCGGTCTGATTGCTACACCATTAATGGACAACCTGGAGATTTTGGCTGGTGCTCAAATGAAAGTACACATCGCTGGCAAGTAGAGTATAACAAGACGTATCTTCTTCGTATTGTCAATGCTGTGATGAATGCAGAACTCTACTTTGCCATTGCTGAACATACACTCACTGTTGTTGGTATGGATGGATCATATGTTAAACCCATCGTGACCGATTATATTATGATTTCTGCCGGACAAACCATGGATATTTTGGTCACCGCCAACCAGCCTCTTGGCCGATACTACATGGCTGGAAGACAATTTGACACCGCTAAGTCATCCATTGAAGGCTATGACAAGTCAAATGTCACAGCAATTCTGGAGTATAAAGGCAATTACTCTCACTCGGTATACCCAATCTTTCCATCCACCCTTCCTGCGTTTGAGGATTTAGAATCTGCGGTAAAGTTCACAAGTCGTCTTAAGAGCTTAGCAAGCATAGACCACCCTACAAATGTGCCACAGAATATAACTACCAAAATGTATATGACGGTTGCGATGAATAATGGCACCCTTATTAATGGTGGTGAAGAGATCAAATTTGGCCTTCTATCAAGTTTAAACAATCTAAGTTGGGTTAATCCATCAACAGATGTGCTACTTGCCTACTACAGGAACATGAGTGGATTTTATACTTCAGATTTTCCTGATTTTCCACCAGCAATGTTTGACTTCATATCTGATTATCTGGCTCCTGATAGAACTATTGTAACTGTCAAAGCAACTAGAGTCAAAGTGTTAGAGTACAATGAAGAGGTGGAAATTGTGTTTCAGGGTACTAATTTGCTTGATGCATCTGAGGATCATCCAATGCACTTGCATGGTTATAGCTTTTATGTAGTTGGATCAGGTTTTGGAGATTTTGACAACGAGACAGACCCTGAAGGGTATAATTTGATTGATCCACCAAAGTTAACTACTGTTTCAGTCCCAAAGAAAGGGTGGGTTGCTATCAGATTCAAAGCCAGTAATCCAGGGGTCTGGTTATGGCACTGTCATTTGGATCGACATTTCAGTTGGGGTATGAACACTGTGATGATAGTGAAAAATGGGGGCACGCCAGAGACGAGCATACGCAGACCACCTCCATACTTGCCTCCATGTAATGGTTCACCTGCCACCGTGTTCGAGCAGTTTCACCACAAATTCAGCAAGACAAGTAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

744

Amino Acids

83.27

Weight (kDa)

5.89

Isoelectric Point (pI)

38.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	189 - 300	3.7e-40	Multicopper oxidase
Cu-oxidase	PF00394	316 - 468	3e-34	Multicopper oxidase
Cu-oxidase_2	PF07731	593 - 706	5.2e-38	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005008)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04235 AT2G04235 AT2G04235 AT2G04235
fragaria_vesca	FvH4_6g40370 FvH4_6g40370
malus_domestica	MD09G1131900.v1.1 MD09G1132300.v1.1 MD09G1132400.v1.1 MD17G1119600.v1.1
prunus_persica	Prupe.3G194100_v2.0.a1 Prupe.3G194100_v2.0.a1 Prupe.3G194100_v2.0.a1
pyrus_communis	pycom09g05380 pycom17g11000
rosa_chinensis	RchiOBHm_Chr2g0155571
rosa_laevigata	RLG00000020846
rosa_multiflora	Rmu_co8276615.1_g000001 Rmu_sc0003439.1_g000001 Rmu_sc0003971.1_g000001
rosa_roxburghii	Rroxscaffold_2G00093640
rosa_rugosa	Rorug02G0447700 Rorug02G0447800 Rorug02G0447900 Rorug02G0448000
rosa_samantha	Rh2AG514400 Rh2BG525200 Rh2CG499300 Rh2DG534100
rosa_wichuraiana	Rw2G042260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2191
AatII	GACGTC	1 cut(s)	222
Acc36I	ACCTGC	1 cut(s)	2191
AccB1I	GGYRCC	2 cut(s)	881, 1577
AccB7I	CCANNNNNTGG	1 cut(s)	2174
AccI	GTMKAC	2 cut(s)	5, 1419
AccII	CGCG	4 cut(s)	212, 245, 270, 645
AclWI	GGATC	6 cut(s)	967, 1222, 1878, 1921, 1964, 2079
AcoI	YGGCCR	1 cut(s)	1303
AcsI	RAATTY	3 cut(s)	793, 1607, 2213
AcuI	CTGAAG	2 cut(s)	1689, 1971
AcyI	GRCGYC	1 cut(s)	219
AfaI	GTAC	6 cut(s)	91, 561, 723, 1093, 1814, 1846
AfeI	AGCGCT	1 cut(s)	375
AfiI	CCNNNNNNNGG	6 cut(s)	291, 324, 464, 1680, 2006, 2174
AflII	CTTAAG	1 cut(s)	1490
AgeI	ACCGGT	1 cut(s)	338
AgsI	TTSAA	3 cut(s)	533, 1355, 2029
AjnI	CCWGG	3 cut(s)	628, 1060, 2041
AleI	CACNNNNGTG	1 cut(s)	838
AluBI	AGCT	4 cut(s)	62, 869, 1497, 1899
AluI	AGCT	4 cut(s)	62, 869, 1497, 1899
Alw21I	GWGCWC	2 cut(s)	64, 1082
Alw26I	GTCTC	6 cut(s)	362, 651, 684, 902, 1934, 2126
AlwI	GGATC	6 cut(s)	967, 1222, 1878, 1921, 1964, 2079
AlwNI	CAGNNNCTG	1 cut(s)	1949
Ama87I	CYCGRG	1 cut(s)	63
Aor51HI	AGCGCT	1 cut(s)	375
AoxI	GGCC	6 cut(s)	315, 535, 570, 697, 1303, 1612
ApoI	RAATTY	3 cut(s)	793, 1607, 2213
ArsI	GACNNNNNNTTYG	2 cut(s)	624, 656
AseI	ATTAAT	2 cut(s)	1050, 1587
AsiGI	ACCGGT	1 cut(s)	338
AspLEI	GCGC	4 cut(s)	208, 253, 297, 376
AspS9I	GGNCC	4 cut(s)	315, 488, 632, 752
AsuC2I	CCSGG	2 cut(s)	128, 319
AsuHPI	GGTGA	6 cut(s)	89, 328, 1276, 1607, 2172, 2198
AsuII	TTCGAA	1 cut(s)	406
AvaI	CYCGRG	1 cut(s)	63
AvaII	GGWCC	3 cut(s)	488, 632, 752
BaeGI	GKGCMC	1 cut(s)	2126
BanI	GGYRCC	2 cut(s)	881, 1577
BanII	GRGCYC	2 cut(s)	64, 933
BbsI	GAAGAC	1 cut(s)	1330
Bbv12I	GWGCWC	2 cut(s)	64, 1082
BccI	CCATC	9 cut(s)	94, 167, 469, 743, 929, 1205, 1238, 1441, 1660
BciT130I	CCWGG	3 cut(s)	630, 1062, 2043
BcnI	CCSGG	2 cut(s)	128, 319
BcoDI	GTCTC	6 cut(s)	362, 651, 684, 902, 1934, 2126
BfaI	CTAG	5 cut(s)	152, 608, 864, 870, 1794
BfmI	CTRYAG	1 cut(s)	1678
BfoI	RGCGCY	3 cut(s)	209, 254, 377
BfrI	CTTAAG	1 cut(s)	1490
BfuAI	ACCTGC	1 cut(s)	2191
BisI	GCNGC	5 cut(s)	29, 204, 213, 246, 249
BlpI	GCTNAGC	2 cut(s)	927, 1498
BlsI	GCNGC	5 cut(s)	30, 205, 214, 247, 250
Bme1390I	CCNGG	5 cut(s)	128, 319, 630, 1062, 2043
Bme18I	GGWCC	3 cut(s)	488, 632, 752
BmeT110I	CYCGRG	1 cut(s)	63
BmgT120I	GGNCC	4 cut(s)	315, 488, 632, 752
BmiI	GGNNCC	3 cut(s)	883, 1579, 1761
BmrFI	CCNGG	5 cut(s)	128, 319, 630, 1062, 2043
BmsI	GCATC	4 cut(s)	306, 407, 1849, 1871
BpiI	GAAGAC	1 cut(s)	1330
BpmI	CTGGAG	3 cut(s)	322, 1083, 1409
Bpu1102I	GCTNAGC	2 cut(s)	927, 1498
Bpu14I	TTCGAA	1 cut(s)	406
BpuEI	CTTGAG	1 cut(s)	548
BpuMI	CCSGG	2 cut(s)	128, 319
BsaHI	GRCGYC	1 cut(s)	219
BsaWI	WCCGGW	1 cut(s)	338
BsaXI	ACNNNNNCTCC	4 cut(s)	147, 177, 648, 678
Bsc4I	CCNNNNNNNGG	6 cut(s)	291, 324, 464, 1680, 2006, 2174
Bse118I	RCCGGY	1 cut(s)	338
Bse1I	ACTGG	2 cut(s)	716, 2034
Bse3DI	GCAATG	2 cut(s)	1176, 1737
BseBI	CCWGG	3 cut(s)	630, 1062, 2043
BseGI	GGATG	6 cut(s)	222, 1009, 1216, 1346, 1433, 1873
BseLI	CCNNNNNNNGG	6 cut(s)	291, 324, 464, 1680, 2006, 2174
BseMI	GCAATG	2 cut(s)	1176, 1737
BseMII	CTCAG	4 cut(s)	77, 918, 990, 1857
BseNI	ACTGG	2 cut(s)	716, 2034
BseRI	GAGGAG	2 cut(s)	207, 1017
BseSI	GKGCMC	1 cut(s)	2126
BseYI	CCCAGC	1 cut(s)	23
BsgI	GTGCAG	2 cut(s)	129, 668
Bsh1236I	CGCG	4 cut(s)	212, 245, 270, 645
BshFI	GGCC	6 cut(s)	317, 537, 572, 699, 1305, 1614
BshNI	GGYRCC	2 cut(s)	881, 1577
BshTI	ACCGGT	1 cut(s)	338
BsiHKAI	GWGCWC	2 cut(s)	64, 1082
BsiHKCI	CYCGRG	1 cut(s)	63
BsiSI	CCGG	4 cut(s)	128, 318, 339, 1260
BslFI	GGGAC	1 cut(s)	1982
BslI	CCNNNNNNNGG	6 cut(s)	291, 324, 464, 1680, 2006, 2174
BsmAI	GTCTC	6 cut(s)	362, 651, 684, 902, 1934, 2126
BsmBI	CGTCTC	1 cut(s)	2126
BsmFI	GGGAC	1 cut(s)	1982
BsmI	GAATGC	2 cut(s)	147, 1162
BsnI	GGCC	6 cut(s)	317, 537, 572, 699, 1305, 1614
BsoBI	CYCGRG	1 cut(s)	63
Bsp119I	TTCGAA	1 cut(s)	406
Bsp1286I	GDGCHC	4 cut(s)	64, 933, 1082, 2126
Bsp143I	GATC	7 cut(s)	959, 1214, 1602, 1870, 1913, 1969, 2071
Bsp1720I	GCTNAGC	2 cut(s)	927, 1498
Bsp19I	CCATGG	3 cut(s)	16, 877, 1269
BspANI	GGCC	6 cut(s)	317, 537, 572, 699, 1305, 1614
BspCNI	CTCAG	4 cut(s)	78, 919, 991, 1858
BspFNI	CGCG	4 cut(s)	212, 245, 270, 645
BspLI	GGNNCC	3 cut(s)	883, 1579, 1761
BspMI	ACCTGC	1 cut(s)	2191
BspPI	GGATC	6 cut(s)	967, 1222, 1878, 1921, 1964, 2079
BspT104I	TTCGAA	1 cut(s)	406
BspT107I	GGYRCC	2 cut(s)	881, 1577
BspTI	CTTAAG	1 cut(s)	1490
BsrDI	GCAATG	2 cut(s)	1176, 1737
BsrFI	RCCGGY	1 cut(s)	338
BsrI	ACTGG	2 cut(s)	716, 2034
BssAI	RCCGGY	1 cut(s)	338
BssMI	GATC	7 cut(s)	959, 1214, 1602, 1870, 1913, 1969, 2071
BssNAI	GTATAC	1 cut(s)	1420
BssNI	GRCGYC	1 cut(s)	219
BssT1I	CCWWGG	6 cut(s)	16, 383, 491, 685, 877, 1269
Bst1107I	GTATAC	1 cut(s)	1420
Bst2UI	CCWGG	3 cut(s)	630, 1062, 2043
Bst4CI	ACNGT	8 cut(s)	664, 1198, 1561, 1783, 1990, 2063, 2101, 2191
Bst6I	CTCTTC	3 cut(s)	900, 1593, 1815
BstACI	GRCGYC	1 cut(s)	219
BstAFI	CTTAAG	1 cut(s)	1490
BstBI	TTCGAA	1 cut(s)	406
BstC8I	GCNNGC	8 cut(s)	210, 293, 605, 647, 846, 1103, 1504, 2126
BstDEI	CTNAG	9 cut(s)	86, 597, 901, 927, 999, 1341, 1498, 1637, 1866
BstDSI	CCRYGG	5 cut(s)	16, 285, 740, 877, 1269
BstEII	GGTNACC	1 cut(s)	1282
BstENI	CCTNNNNNAGG	1 cut(s)	1678
BstF5I	GGATG	6 cut(s)	222, 1009, 1216, 1346, 1433, 1873
BstFNI	CGCG	4 cut(s)	212, 245, 270, 645
BstH2I	RGCGCY	3 cut(s)	209, 254, 377
BstHHI	GCGC	4 cut(s)	208, 253, 297, 376
BstKTI	GATC	7 cut(s)	962, 1217, 1605, 1873, 1916, 1972, 2074
BstMAI	GTCTC	6 cut(s)	362, 651, 684, 902, 1934, 2126
BstMBI	GATC	7 cut(s)	959, 1214, 1602, 1870, 1913, 1969, 2071
BstMWI	GCNNNNNNNGC	5 cut(s)	37, 186, 209, 212, 1503
BstNI	CCWGG	3 cut(s)	630, 1062, 2043
BstNSI	RCATGY	2 cut(s)	607, 848
BstPI	GGTNACC	1 cut(s)	1282
BstSCI	CCNGG	5 cut(s)	126, 317, 628, 1060, 2041
BstSFI	CTRYAG	1 cut(s)	1678
BstSLI	GKGCMC	1 cut(s)	2126
BstUI	CGCG	4 cut(s)	212, 245, 270, 645
BstV2I	GAAGAC	1 cut(s)	1330
BstX2I	RGATCY	1 cut(s)	959
BstXI	CCANNNNNNTGG	3 cut(s)	23, 1301, 2049
BstYI	RGATCY	1 cut(s)	959
BstZ17I	GTATAC	1 cut(s)	1420
BsuRI	GGCC	6 cut(s)	317, 537, 572, 699, 1305, 1614
BtgI	CCRYGG	5 cut(s)	16, 285, 740, 877, 1269
BtgZI	GCGATG	2 cut(s)	1082, 1580
BtsCI	GGATG	6 cut(s)	222, 1009, 1216, 1346, 1433, 1873
BtsIMutI	CAGTG	4 cut(s)	709, 1194, 2059, 2097
BveI	ACCTGC	1 cut(s)	2191
Cac8I	GCNNGC	8 cut(s)	210, 293, 605, 647, 846, 1103, 1504, 2126
CaiI	CAGNNNCTG	1 cut(s)	1949
CfoI	GCGC	4 cut(s)	208, 253, 297, 376
Cfr10I	RCCGGY	1 cut(s)	338
Cfr13I	GGNCC	4 cut(s)	315, 488, 632, 752
CseI	GACGC	1 cut(s)	251
Csp6I	GTAC	6 cut(s)	90, 560, 722, 1092, 1813, 1845
CspAI	ACCGGT	1 cut(s)	338
CspCI	CAANNNNNGTGG	2 cut(s)	157, 192
CviQI	GTAC	6 cut(s)	90, 560, 722, 1092, 1813, 1845
DdeI	CTNAG	9 cut(s)	86, 597, 901, 927, 999, 1341, 1498, 1637, 1866
DpnI	GATC	7 cut(s)	961, 1216, 1604, 1872, 1915, 1971, 2073
DpnII	GATC	7 cut(s)	959, 1214, 1602, 1870, 1913, 1969, 2071
DraI	TTTAAA	1 cut(s)	1629
EaeI	YGGCCR	1 cut(s)	1303
Eam1104I	CTCTTC	3 cut(s)	900, 1593, 1815
EarI	CTCTTC	3 cut(s)	900, 1593, 1815
EciI	GGCGGA	2 cut(s)	204, 230
Ecl136II	GAGCTC	1 cut(s)	62
Eco130I	CCWWGG	6 cut(s)	16, 383, 491, 685, 877, 1269
Eco24I	GRGCYC	2 cut(s)	64, 933
Eco47I	GGWCC	3 cut(s)	488, 632, 752
Eco47III	AGCGCT	1 cut(s)	375
Eco53kI	GAGCTC	1 cut(s)	62
Eco57I	CTGAAG	2 cut(s)	1689, 1971
Eco88I	CYCGRG	1 cut(s)	63
Eco91I	GGTNACC	1 cut(s)	1282
EcoICRI	GAGCTC	1 cut(s)	62
EcoNI	CCTNNNNNAGG	1 cut(s)	1678
EcoO65I	GGTNACC	1 cut(s)	1282
EcoRII	CCWGG	3 cut(s)	628, 1060, 2041
EcoT14I	CCWWGG	6 cut(s)	16, 383, 491, 685, 877, 1269
EcoT22I	ATGCAT	1 cut(s)	1864
EcoT38I	GRGCYC	2 cut(s)	64, 933
ErhI	CCWWGG	6 cut(s)	16, 383, 491, 685, 877, 1269
Esp3I	CGTCTC	1 cut(s)	2126
FalI	AAGNNNNNCTT	2 cut(s)	1002, 1034
FaqI	GGGAC	1 cut(s)	1982
FauI	CCCGC	2 cut(s)	284, 497
FauNDI	CATATG	1 cut(s)	1219
FblI	GTMKAC	2 cut(s)	5, 1419
Fnu4HI	GCNGC	5 cut(s)	29, 204, 213, 246, 249
FokI	GGATG	6 cut(s)	209, 1016, 1223, 1333, 1420, 1860
FriOI	GRGCYC	2 cut(s)	64, 933
Fsp4HI	GCNGC	5 cut(s)	29, 204, 213, 246, 249
FspBI	CTAG	5 cut(s)	152, 608, 864, 870, 1794
GlaI	GCGC	4 cut(s)	207, 252, 296, 375
GluI	GCNGC	5 cut(s)	29, 204, 213, 246, 249
GsaI	CCCAGC	1 cut(s)	27
GsuI	CTGGAG	3 cut(s)	322, 1083, 1409
HaeII	RGCGCY	3 cut(s)	209, 254, 377
HaeIII	GGCC	6 cut(s)	317, 537, 572, 699, 1305, 1614
HapII	CCGG	4 cut(s)	128, 318, 339, 1260
HgaI	GACGC	1 cut(s)	251
HhaI	GCGC	4 cut(s)	208, 253, 297, 376
Hin1I	GRCGYC	1 cut(s)	219
Hin6I	GCGC	4 cut(s)	206, 251, 295, 374
HinP1I	GCGC	4 cut(s)	206, 251, 295, 374
HincII	GTYRAC	2 cut(s)	616, 1983
HindII	GTYRAC	2 cut(s)	616, 1983
HinfI	GANTC	7 cut(s)	159, 182, 195, 274, 1463, 1797, 2025
HpaI	GTTAAC	1 cut(s)	1983
HpaII	CCGG	4 cut(s)	128, 318, 339, 1260
HphI	GGTGA	6 cut(s)	89, 328, 1276, 1607, 2172, 2198
Hpy166II	GTNNAC	8 cut(s)	6, 336, 616, 1094, 1420, 1479, 1983, 2180
Hpy188I	TCNGA	9 cut(s)	279, 748, 820, 984, 1036, 1708, 1750, 1867, 2024
Hpy188III	TCNNGA	9 cut(s)	138, 301, 367, 755, 1019, 1234, 1388, 1715, 1763
Hpy8I	GTNNAC	8 cut(s)	6, 336, 616, 1094, 1420, 1479, 1983, 2180
Hpy99I	CGWCG	1 cut(s)	167
HpyAV	CCTTC	7 cut(s)	527, 821, 1007, 1349, 1451, 1625, 1946
HpyCH4III	ACNGT	8 cut(s)	664, 1198, 1561, 1783, 1990, 2063, 2101, 2191
HpyCH4IV	ACGT	3 cut(s)	219, 979, 1124
HpyCH4V	TGCA	8 cut(s)	110, 122, 145, 649, 1160, 1862, 1882, 1888
HpyF10VI	GCNNNNNNNGC	5 cut(s)	37, 186, 209, 212, 1503
HpyF3I	CTNAG	9 cut(s)	86, 597, 901, 927, 999, 1341, 1498, 1637, 1866
HpySE526I	ACGT	3 cut(s)	219, 979, 1124
Hsp92I	GRCGYC	1 cut(s)	219
HspAI	GCGC	4 cut(s)	206, 251, 295, 374
KspAI	GTTAAC	1 cut(s)	1983
Kzo9I	GATC	7 cut(s)	959, 1214, 1602, 1870, 1913, 1969, 2071
LmnI	GCTCC	3 cut(s)	59, 522, 1765
LweI	GCATC	4 cut(s)	306, 407, 1849, 1871
MaeI	CTAG	5 cut(s)	152, 608, 864, 870, 1794
MaeII	ACGT	3 cut(s)	219, 979, 1124
MaeIII	GTNAC	6 cut(s)	763, 994, 1234, 1282, 1375, 1777
MalI	GATC	7 cut(s)	961, 1216, 1604, 1872, 1915, 1971, 2073
MboI	GATC	7 cut(s)	959, 1214, 1602, 1870, 1913, 1969, 2071
MflI	RGATCY	1 cut(s)	959
MhlI	GDGCHC	4 cut(s)	64, 933, 1082, 2126
MlyI	GAGTC	2 cut(s)	204, 1806
MmeI	TCCRAC	2 cut(s)	219, 1891
Mph1103I	ATGCAT	1 cut(s)	1864
MseI	TTAA	9 cut(s)	12, 971, 1050, 1224, 1491, 1587, 1628, 1647, 1982
MslI	CAYNNNNRTG	7 cut(s)	473, 549, 644, 714, 838, 1887, 2102
MspCI	CTTAAG	1 cut(s)	1490
MspI	CCGG	4 cut(s)	128, 318, 339, 1260
MspR9I	CCNGG	5 cut(s)	128, 319, 630, 1062, 2043
MssI	GTTTAAAC	1 cut(s)	1629
Mva1269I	GAATGC	2 cut(s)	147, 1162
MvaI	CCWGG	3 cut(s)	630, 1062, 2043
MvnI	CGCG	4 cut(s)	212, 245, 270, 645
MwoI	GCNNNNNNNGC	5 cut(s)	37, 186, 209, 212, 1503
NciI	CCSGG	2 cut(s)	128, 319
NcoI	CCATGG	3 cut(s)	16, 877, 1269
NdeI	CATATG	1 cut(s)	1219
NdeII	GATC	7 cut(s)	959, 1214, 1602, 1870, 1913, 1969, 2071
NlaIV	GGNNCC	3 cut(s)	883, 1579, 1761
NmuCI	GTSAC	4 cut(s)	763, 1234, 1282, 1375
NsiI	ATGCAT	1 cut(s)	1864
NspI	RCATGY	2 cut(s)	607, 848
NspV	TTCGAA	1 cut(s)	406
OliI	CACNNNNGTG	1 cut(s)	838
PaeI	GCATGC	2 cut(s)	607, 848
PaqCI	CACCTGC	1 cut(s)	2191
PcsI	WCGNNNNNNNCGW	5 cut(s)	168, 177, 216, 225, 2132
PctI	GAATGC	2 cut(s)	147, 1162
PfeI	GAWTC	5 cut(s)	159, 182, 274, 1463, 2025
PflFI	GACNNNGTC	1 cut(s)	662
PflMI	CCANNNNNTGG	1 cut(s)	2174
PfoI	TCCNGGA	2 cut(s)	126, 628
PinAI	ACCGGT	1 cut(s)	338
PkrI	GCNGC	5 cut(s)	30, 205, 214, 247, 250
PleI	GAGTC	2 cut(s)	203, 1805
PmeI	GTTTAAAC	1 cut(s)	1629
PpsI	GAGTC	2 cut(s)	203, 1805
PshBI	ATTAAT	2 cut(s)	1050, 1587
Psp124BI	GAGCTC	1 cut(s)	64
Psp6I	CCWGG	3 cut(s)	628, 1060, 2041
PspEI	GGTNACC	1 cut(s)	1282
PspFI	CCCAGC	1 cut(s)	23
PspGI	CCWGG	3 cut(s)	628, 1060, 2041
PspN4I	GGNNCC	3 cut(s)	883, 1579, 1761
PspPI	GGNCC	4 cut(s)	315, 488, 632, 752
PstNI	CAGNNNCTG	1 cut(s)	1949
PsuI	RGATCY	1 cut(s)	959
PsyI	GACNNNGTC	1 cut(s)	662
RsaI	GTAC	6 cut(s)	91, 561, 723, 1093, 1814, 1846
RsaNI	GTAC	6 cut(s)	90, 560, 722, 1092, 1813, 1845
RseI	CAYNNNNRTG	7 cut(s)	473, 549, 644, 714, 838, 1887, 2102
SacI	GAGCTC	1 cut(s)	64
SaqAI	TTAA	9 cut(s)	12, 971, 1050, 1224, 1491, 1587, 1628, 1647, 1982
SatI	GCNGC	5 cut(s)	29, 204, 213, 246, 249
Sau3AI	GATC	7 cut(s)	959, 1214, 1602, 1870, 1913, 1969, 2071
Sau96I	GGNCC	4 cut(s)	315, 488, 632, 752
SchI	GAGTC	2 cut(s)	204, 1806
ScrFI	CCNGG	5 cut(s)	128, 319, 630, 1062, 2043
SduI	GDGCHC	4 cut(s)	64, 933, 1082, 2126
SfaNI	GCATC	4 cut(s)	306, 407, 1849, 1871
SfcI	CTRYAG	1 cut(s)	1678
SfuI	TTCGAA	1 cut(s)	406
SgrAI	CRCCGGYG	1 cut(s)	338
SinI	GGWCC	3 cut(s)	488, 632, 752
SmiMI	CAYNNNNRTG	7 cut(s)	473, 549, 644, 714, 838, 1887, 2102
SmlI	CTYRAG	2 cut(s)	563, 1490
SmoI	CTYRAG	2 cut(s)	563, 1490
SphI	GCATGC	2 cut(s)	607, 848
SspMI	CTAG	5 cut(s)	152, 608, 864, 870, 1794
SstI	GAGCTC	1 cut(s)	64
StyD4I	CCNGG	5 cut(s)	126, 317, 628, 1060, 2041
StyI	CCWWGG	6 cut(s)	16, 383, 491, 685, 877, 1269
TaaI	ACNGT	8 cut(s)	664, 1198, 1561, 1783, 1990, 2063, 2101, 2191
TaiI	ACGT	3 cut(s)	222, 982, 1127
TaqI	TCGA	7 cut(s)	198, 228, 366, 406, 1008, 2074, 2196
TaqII	GACCGA	3 cut(s)	649, 1020, 1253
TatI	WGTACW	4 cut(s)	559, 721, 1091, 1812
TauI	GCSGC	5 cut(s)	31, 206, 215, 248, 251
TfiI	GAWTC	5 cut(s)	159, 182, 274, 1463, 2025
Tru1I	TTAA	9 cut(s)	12, 971, 1050, 1224, 1491, 1587, 1628, 1647, 1982
Tru9I	TTAA	9 cut(s)	12, 971, 1050, 1224, 1491, 1587, 1628, 1647, 1982
TscAI	CASTG	4 cut(s)	716, 1201, 2066, 2104
TseFI	GTSAC	4 cut(s)	763, 1234, 1282, 1375
Tsp45I	GTSAC	4 cut(s)	763, 1234, 1282, 1375
TspDTI	ATGAA	9 cut(s)	408, 485, 533, 1101, 1169, 1583, 1732, 1833, 2108
TspGWI	ACGGA	2 cut(s)	274, 729
TspRI	CASTG	4 cut(s)	716, 1201, 2066, 2104
Tth111I	GACNNNGTC	1 cut(s)	662
Van91I	CCANNNNNTGG	1 cut(s)	2174
Vha464I	CTTAAG	1 cut(s)	1490
VpaK11BI	GGWCC	3 cut(s)	488, 632, 752
VspI	ATTAAT	2 cut(s)	1050, 1587
XagI	CCTNNNNNAGG	1 cut(s)	1678
XapI	RAATTY	3 cut(s)	793, 1607, 2213
XceI	RCATGY	2 cut(s)	607, 848
XcmI	CCANNNNNNNNNTGG	4 cut(s)	692, 738, 1276, 2007
XmiI	GTMKAC	2 cut(s)	5, 1419
XspI	CTAG	5 cut(s)	152, 608, 864, 870, 1794
ZraI	GACGTC	1 cut(s)	220
Zsp2I	ATGCAT	1 cut(s)	1864

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.