MD17G1119600.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
10369937 .. 10378349
8413 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1119600.v1.1.491

Sequence Viewer

Length: 4110 bp
ATGGCCTCCGACGGACCCGATGAGCCCTGCAACTCCGAGACCGAACCGGAAACAATAGCCCTAAGAATCAAGCAGAAGCGCTCCCGCCGCGTGAGCTTCGCCGACACCGAGATCACCTCCGTCCACATATTCAACCGCGACGAGGAGTACGACACACCTCCCGACCCCAAGCCCCGACCCAGCTCTCAAAACGACGTCGCACAGGCCGAGAACCCGGTGATAGGGTTTTTTAGGGACTTGGGCGGTGACAGCGACGATTTTAGGGATTCCGATGACGATGACCAAAACGACGACGGGAGTAAGTCGTTTTTCAGGCCAAATGGATCGCCCTCTCCTGGGAGTAGTGTTCCGGGCTCTGCAACCTCCAACGACGAAGACAATTTCTTTGGCCCTGTATCGGCCAATTTCATTAGACCAGGACGGTTATCTGATTCCGCGGCCTCAGATGATATTCATGAAGCTACATTGGATACTACAGCATTTTCAATGCATTACCGCAGTCTTGCAAGGTCAGACTCCGGAGGAGATCTCAAGACCCCAACGGCAGTGCGCCTTGCCTTTGAAGAGAGGACGCCAATCCATAGTACCAATGTTACTGATTCTGGAAGTCTCATGTCTCTAACAAAACCGAAGATGCTTACTCCTCAGTCTTCGGTCCCTGCTGATAAGGTTAGAAGCGGCGAAGATTCGAATGACATGAGTATTATAGAAGAAAACCCACATAAGTACGAATATGGAAGACTATCTCCGTCATTAGATGCACTTTTGGCAGCAGGCAGCAAGGATCTGCATGCTGACTCTGTTGCCGTCCCTGCCAGTTCAATGTCACCAAAGGGGGATGAGGTATCTGCATCAGATGAAAATGAGATTGGCCACATGAGAAATGGTAGAACTACTGACACGCCTAATGAGGCAGAATCAGTTTCTTGTATCAAGTTGAGTGAGGGAAATGGTGGTTCGTTTCATCAAACTGCTTATGATGCATCATCTAACAGAGGTCGTAATCCAGCTGCAGGTGACTTTGTTGATGGCCAAATCCAGACTCCGAATCAATTAAACAATGTGAATAAGGAATTTACTGAAGTTGGATCTCCAAGGGATATGAAAAAATTGGAGTTAACTGCTGTTAATGGCAAAGTCCTACCAGAATTCAATAGTGAAGCACTTCAGTTTAATGTGTTTGTCCAGCATGAACCTGCTTATCAACATTCAAGTCAAGGCATGGTTCAAGAATATTCTCTTAAGGAGAAAACATATAATAAAGATCAACATTTGGACCAACAATATAGATCACCGATGGAGGGGTCCATATTATTGTTATCTGCTAGACATCAGCAATCGGTTTGGAATACTCCTAATTTGGCAAGACACTCAAGGATAGTGACTCCATCCTCGAAACAACCAGGTTCCTTTTTAAGTGCGGAACACACGAAACATAATGAGTGGGTTTCATCAATTCAGAAAAGTATTTCTAGATTCACACTTCCTGAGCCTTCTCCTTGTGCTTCTAGTCTCAAAGATGGAATTGAAAAATTAAAATGTAGATTATCAAGTTACTCATCTGTGAATTCTCCCATAAAGAATGTTATGGCTGACATTAGCAAAGATCTCCAGTGCAAATTTTCTAATTCTCCTACTGCTTGTTTAGAGAAGCAAACAGCTATGCCTGATCTCAACAGTGGACAGAAAAGCTTATTTAACATGAATAGCAATGGGAATGAGAACCCAATAAACATCAGTATGTTGAGCCAGGTTAACGAGACCACAGACCTTGATAAAGATGAAGAGCCTCAGCATAGCATGGTTACAAACACTCCTTTGAAGGATACATTTGGCACACCAAGAAAAGCAGTGGCTTCACCCTCTCAGCTGTCATTATCAGGAAGCAAAATGACACACCACCTCCTGATGTTAGAAACTCCCACTGAAGGATTATTGGTTTCTGCTGGAACTGCTCCCATATTGGCTGGTGAGCGAGAAGATAGTCCTCCCCATCTGCAAATTGAATCTGAAAAGAACTTCCAATCACCTTCAAAAGGTGCAGTCATTCTAAACAGCCCAGATAAAAGCATTCCAGGTGGAGCAGAACCACTGCATTCTAAACCATATGTCTGCAGCAGCATGACTGAACAATACCTTCAGAGCCCTTCCAGTAAAGAGTCAGCTGAGAACCCCTCCACGAAGGGGCGAAGTCAGGGTCCACCCTGGGAGAATCCAACCCTGAATTCTACTGGGAGAAAGGTAACTCAGAGTCCCCTCAAGAAAGTGCCAAGTCAGAGTCCCCACAGGAAAGAATCAACTCTGAGTCCTCCCAGAAAAGAACTTACTCCAAGTCCTGGAAGAGAACCAATTCGAAGTCCCTTTGTGAAAGAGCTAACTCGAAGTCCTATTGTGAGAGACCCAATTCAAAGTCCTATTGTGAGAGAGCCAATTCATAGTCCCTTCATAAAAGATATGAATCAGAGTCCCTCAAGAAAAGAGTCAACAAATAGCCCCTCCAGGCTGGATTCATCTTATGCAGCTGACACTGAGAATATGCAACCCTTTGCTGGGAAAGACCTAGTATCCCACGAGTCCAATTCAAATGGTCATCCTAGTAGTGATGACTGTTATCAGGGAGTGTATAATTCACGTAGTCCATTTACAGGGCAAGATTCAGAGAAATCTGTTGGACGGAAACGACGAAACCTAGGAATAATTTCTGAGGATGGATACTGTACAGATATGATCCCCAGAATCCAGAAAAGCCCGAAAGTTCCCAGAAGTGAGAACTGCAATCCAGAGTTCATGCTGCATCAGTCAAATAAAGGTTATGATGGCAGAGTGAAGTGTGGGGGCGATACAACATGGAAGTGCTGGACTGATATTTTAGTAAAATTCTCAGGAGATACAGAACAACTGCTTTCTCCATCGGCAAGAAAACTAAATTTAAGAGCGATCGGTGTGCTGGATAATATGCTGGTCCACCTATTGAAGGCTAAAAAATATGGGACGTTGTGTTCTGAGGTCCAGTCTCAGAAGTTCGACTGCATCAATGTTGGGCATAAAAGAGTAGCTGAAGCAAGATTGCTGCTTTATAAAATAGTGTATGAAAAGGCAAAATTGCAGTTAATGCAAGTGAAGCGCGATAAATTACAGAGTAGAGTACAGCTCTTACGCTCAGCAATTCAGAAGTCTCAGATGCTGAAATTGAATTACATTCGTTGTCAGTCTGAACCTAGTGAATGGCAGACTCATGTTGATGATAGTCATCATCAGTCCTCTTTAGTTAATTCTGAGGGTGAACAAGAGGCTTCCTATGATAATGTAAGCACAATGAGGCAGGAGCTTAAAGCTTTAGACAGAGATGTAAAAAACTTAAGCAATTTCTTTCACATCCAATGCAAGTTGAAAGGAGAACCAAGTTGCGCCGATACTATTTCATTAGTTCAACATCAACTGAAGACAAGAGCATGTTGCAGGATTATATGTCATGATTTACAGCTATGGAATATTGATCATTTTGAGATTAAGAATGGCCATTACAACATTCTTCTCAGTTATCATGGTTACGTCTTGCAAAGGTTTATGGGTACTGTGGGCCCAACATCAAACATAGCCATCTCACACAATATGAATGATATAAAAATCACAAAGGAATTCCCAAACATGGATGTTCAAGTTGCATTTGGTTTTGTGCTAAATGCTGAGGCCACCGAAAAAAGTTCTGAGTTGAGATGTTTGCCTTTGGCACAAGAAACACAAGTAACCCGTTCACTGCTAAGAAATCTGCTAGATGTGGTTGAGGAAGTGCACCTGGCTCGACTTGAGATTGTAAATTTGATTCAAACAAATTTTCAAACTCCATCTGCTGAGCAACTTGATCTGAAGCTTTGTTTCCTTAACTTTAAGAGTGGTAGACAAGTGGCACTGACTCTCGACGTGACCTGTTTGAAAAGTGGGATTTATCCCTCAGAGATCCTTCCGCATCAGATACAGGCTTCCGAATCTGCAGTAGAAAAGCCGCTGCCTGAGTCACTTTTAGCTGAAATACGAGCTGCAGCGGAGAGTCTTGATTCTGGATATACGAGAATAATGAGGCTCTGCAAGTGTATCTCCAACGTGGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1370

Amino Acids

151.52

Weight (kDa)

6.08

Isoelectric Point (pI)

56.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3078
AarI CACCTGC 1 cut(s) 1004
AatII GACGTC 1 cut(s) 198
Acc36I ACCTGC 2 cut(s) 1004, 1204
AccB7I CCANNNNNTGG 1 cut(s) 2336
AccI GTMKAC 1 cut(s) 3898
AccII CGCG 4 cut(s) 90, 138, 437, 3126
AccIII TCCGGA 1 cut(s) 518
AclWI GGATC 5 cut(s) 331, 792, 1096, 2722, 3952
AcoI YGGCCR 4 cut(s) 399, 871, 1030, 3517
AcuI CTGAAG 7 cut(s) 1101, 1151, 1947, 2123, 3078, 3461, 3887
AcyI GRCGYC 2 cut(s) 195, 572
AfaI GTAC 6 cut(s) 149, 586, 728, 2719, 3147, 3574
AfeI AGCGCT 1 cut(s) 80
AflII CTTAAG 2 cut(s) 1241, 3358
AjiI CACGTC 1 cut(s) 3922
AjnI CCWGG 9 cut(s) 334, 415, 1402, 1749, 2074, 2204, 2335, 2498, 3795
AjuI GAANNNNNNNTTGG 4 cut(s) 852, 884, 2209, 2241
AloI GAACNNNNNNTCC 2 cut(s) 2983, 3015
Alw21I GWGCWC 1 cut(s) 3795
Alw26I GTCTC 8 cut(s) 32, 614, 621, 1517, 1754, 2391, 3018, 3180
Alw44I GTGCAC 1 cut(s) 3791
AlwI GGATC 5 cut(s) 331, 792, 1096, 2722, 3952
AlwNI CAGNNNCTG 1 cut(s) 3184
Aor13HI TCCGGA 1 cut(s) 518
Aor51HI AGCGCT 1 cut(s) 80
ApaI GGGCCC 1 cut(s) 3584
ApaLI GTGCAC 1 cut(s) 3791
ArsI GACNNNNNNTTYG 4 cut(s) 368, 400, 2182, 2214
Asp700I GAANNNNTTC 3 cut(s) 1164, 2349, 2698
AspA2I CCTAGG 1 cut(s) 2689
AspLEI GCGC 4 cut(s) 81, 552, 3126, 3410
AsuC2I CCSGG 2 cut(s) 215, 351
AsuII TTCGAA 2 cut(s) 689, 2353
AvaII GGWCC 7 cut(s) 14, 655, 1276, 1305, 2198, 2962, 3007
AvrII CCTAGG 1 cut(s) 2689
BaeGI GKGCMC 2 cut(s) 3584, 3795
BalI TGGCCA 3 cut(s) 873, 1032, 3519
BanII GRGCYC 4 cut(s) 27, 356, 2147, 3584
BauI CACGAG 1 cut(s) 2570
BbsI GAAGAC 4 cut(s) 381, 642, 745, 3449
Bbv12I GWGCWC 1 cut(s) 3795
BbvCI CCTCAGC 2 cut(s) 1791, 3687
BceAI ACGGC 2 cut(s) 558, 791
BcgI CGANNNNNNTGC 4 cut(s) 2926, 2960, 3782, 3816
BciT130I CCWGG 9 cut(s) 336, 417, 1404, 1751, 2076, 2206, 2337, 2500, 3797
BciVI GTATCC 4 cut(s) 463, 1819, 2575, 2705
BclI TGATCA 1 cut(s) 3496
BcnI CCSGG 2 cut(s) 215, 351
BcoDI GTCTC 8 cut(s) 32, 614, 621, 1517, 1754, 2391, 3018, 3180
BfaI CTAG 8 cut(s) 1326, 1473, 1509, 2561, 2595, 2690, 3219, 3773
BfmI CTRYAG 5 cut(s) 474, 1011, 2113, 3990, 4038
BfoI RGCGCY 1 cut(s) 82
BfrI CTTAAG 2 cut(s) 1241, 3358
BfuAI ACCTGC 2 cut(s) 1004, 1204
BfuI GTATCC 4 cut(s) 463, 1819, 2575, 2705
BglII AGATCT 2 cut(s) 526, 1606
BlnI CCTAGG 1 cut(s) 2689
BlpI GCTNAGC 2 cut(s) 3160, 3852
Bme18I GGWCC 7 cut(s) 14, 655, 1276, 1305, 2198, 2962, 3007
BmgBI CACGTC 1 cut(s) 3922
BmiI GGNNCC 6 cut(s) 16, 657, 1306, 1408, 2199, 3582
BmrI ACTGGG 1 cut(s) 2241
BmsI GCATC 9 cut(s) 624, 748, 860, 970, 992, 2803, 3039, 3171, 3976
BmuI ACTGGG 1 cut(s) 2241
BpiI GAAGAC 4 cut(s) 381, 642, 745, 3449
BplI GAGNNNNNCTC 8 cut(s) 101, 133, 513, 545, 2159, 2191, 3135, 3167
BpmI CTGGAG 2 cut(s) 1595, 2482
Bpu10I CCTNAGC 3 cut(s) 1488, 1791, 3687
Bpu1102I GCTNAGC 2 cut(s) 3160, 3852
Bpu14I TTCGAA 2 cut(s) 689, 2353
BpuEI CTTGAG 5 cut(s) 515, 1357, 2243, 2455, 3827
BpuMI CCSGG 2 cut(s) 215, 351
BsaAI YACGTR 1 cut(s) 2633
BsaBI GATNNNNATC 2 cut(s) 2457, 3249
BsaHI GRCGYC 2 cut(s) 195, 572
BsaI GGTCTC 3 cut(s) 32, 1754, 2391
BsaJI CCNNGG 6 cut(s) 335, 435, 1094, 2204, 2205, 2689
BsaWI WCCGGW 2 cut(s) 46, 518
BsaXI ACNNNNNCTCC 4 cut(s) 1798, 1828, 1887, 1917
Bse1I ACTGG 5 cut(s) 816, 1612, 2151, 2236, 3010
Bse3DI GCAATG 1 cut(s) 1717
Bse8I GATNNNNATC 2 cut(s) 2457, 3249
BseAI TCCGGA 1 cut(s) 518
BseBI CCWGG 9 cut(s) 336, 417, 1404, 1751, 2076, 2206, 2337, 2500, 3797
BseDI CCNNGG 6 cut(s) 335, 435, 1094, 2204, 2205, 2689
BseGI GGATG 6 cut(s) 844, 1388, 2590, 2713, 3375, 3658
BseJI GATNNNNATC 2 cut(s) 2457, 3249
BseMI GCAATG 1 cut(s) 1717
BseNI ACTGG 5 cut(s) 816, 1612, 2151, 2236, 3010
BseRI GAGGAG 3 cut(s) 158, 537, 633
BseSI GKGCMC 2 cut(s) 3584, 3795
BseYI CCCAGC 2 cut(s) 179, 2549
BsgI GTGCAG 1 cut(s) 2061
Bsh1236I CGCG 4 cut(s) 90, 138, 437, 3126
Bsh1285I CGRYCG 1 cut(s) 2940
BsiEI CGRYCG 1 cut(s) 2940
BsiHKAI GWGCWC 1 cut(s) 3795
BsiSI CCGG 4 cut(s) 47, 215, 350, 519
BslFI GGGAC 9 cut(s) 248, 641, 794, 2238, 2265, 2343, 2424, 2451, 3004
BsmAI GTCTC 8 cut(s) 32, 614, 621, 1517, 1754, 2391, 3018, 3180
BsmFI GGGAC 9 cut(s) 248, 641, 794, 2238, 2265, 2343, 2424, 2451, 3004
BsmI GAATGC 2 cut(s) 2070, 2095
Bso31I GGTCTC 3 cut(s) 32, 1754, 2391
Bsp119I TTCGAA 2 cut(s) 689, 2353
Bsp120I GGGCCC 1 cut(s) 3580
Bsp1286I GDGCHC 5 cut(s) 27, 356, 2147, 3584, 3795
Bsp13I TCCGGA 1 cut(s) 518
Bsp1407I TGTACA 1 cut(s) 2717
Bsp1720I GCTNAGC 2 cut(s) 3160, 3852
BspEI TCCGGA 1 cut(s) 518
BspFNI CGCG 4 cut(s) 90, 138, 437, 3126
BspHI TCATGA 2 cut(s) 454, 3472
BspLI GGNNCC 6 cut(s) 16, 657, 1306, 1408, 2199, 3582
BspMAI CTGCAG 4 cut(s) 1015, 2117, 3994, 4042
BspMI ACCTGC 2 cut(s) 1004, 1204
BspPI GGATC 5 cut(s) 331, 792, 1096, 2722, 3952
BspQI GCTCTTC 1 cut(s) 1779
BspT104I TTCGAA 2 cut(s) 689, 2353
BspTI CTTAAG 2 cut(s) 1241, 3358
BspTNI GGTCTC 3 cut(s) 32, 1754, 2391
BsrDI GCAATG 1 cut(s) 1717
BsrGI TGTACA 1 cut(s) 2717
BsrI ACTGG 5 cut(s) 816, 1612, 2151, 2236, 3010
BssECI CCNNGG 6 cut(s) 335, 435, 1094, 2204, 2205, 2689
BssNI GRCGYC 2 cut(s) 195, 572
BssSI CACGAG 1 cut(s) 2570
BssT1I CCWWGG 2 cut(s) 1094, 2689
Bst2BI CACGAG 1 cut(s) 2570
Bst2UI CCWGG 9 cut(s) 336, 417, 1404, 1751, 2076, 2206, 2337, 2500, 3797
Bst4CI ACNGT 5 cut(s) 423, 1679, 2609, 2717, 3577
Bst6I CTCTTC 3 cut(s) 558, 1779, 2335
BstACI GRCGYC 2 cut(s) 195, 572
BstAFI CTTAAG 2 cut(s) 1241, 3358
BstAPI GCANNNNNTGC 1 cut(s) 3112
BstAUI TGTACA 1 cut(s) 2717
BstBAI YACGTR 1 cut(s) 2633
BstBI TTCGAA 2 cut(s) 689, 2353
BstC8I GCNNGC 2 cut(s) 775, 792
BstDSI CCRYGG 1 cut(s) 435
BstENI CCTNNNNNAGG 2 cut(s) 2034, 2972
BstF5I GGATG 6 cut(s) 844, 1388, 2590, 2713, 3375, 3658
BstFNI CGCG 4 cut(s) 90, 138, 437, 3126
BstH2I RGCGCY 1 cut(s) 82
BstHHI GCGC 4 cut(s) 81, 552, 3126, 3410
BstMAI GTCTC 8 cut(s) 32, 614, 621, 1517, 1754, 2391, 3018, 3180
BstMCI CGRYCG 1 cut(s) 2940
BstMWI GCNNNNNNNGC 9 cut(s) 87, 93, 249, 767, 812, 980, 1952, 3112, 3121
BstNI CCWGG 9 cut(s) 336, 417, 1404, 1751, 2076, 2206, 2337, 2500, 3797
BstNSI RCATGY 2 cut(s) 794, 3456
BstSFI CTRYAG 5 cut(s) 474, 1011, 2113, 3990, 4038
BstSLI GKGCMC 2 cut(s) 3584, 3795
BstUI CGCG 4 cut(s) 90, 138, 437, 3126
BstV2I GAAGAC 4 cut(s) 381, 642, 745, 3449
BstX2I RGATCY 5 cut(s) 526, 784, 1088, 1606, 3957
BstYI RGATCY 5 cut(s) 526, 784, 1088, 1606, 3957
BsuI GTATCC 4 cut(s) 463, 1819, 2575, 2705
BtgI CCRYGG 1 cut(s) 435
BtrI CACGTC 1 cut(s) 3922
BtsCI GGATG 6 cut(s) 844, 1388, 2590, 2713, 3375, 3658
BtsI GCAGTG 4 cut(s) 552, 1857, 2090, 3755
BtsIMutI CAGTG 9 cut(s) 552, 1619, 1684, 1857, 1923, 2090, 2526, 3755, 3908
BveI ACCTGC 2 cut(s) 1004, 1204
Cac8I GCNNGC 2 cut(s) 775, 792
CaiI CAGNNNCTG 1 cut(s) 3184
CciI TCATGA 2 cut(s) 454, 3472
CfoI GCGC 4 cut(s) 81, 552, 3126, 3410
Cfr42I CCGCGG 1 cut(s) 438
CseI GACGC 1 cut(s) 580
CsiI ACCWGGT 1 cut(s) 1402
Csp6I GTAC 6 cut(s) 148, 585, 727, 2718, 3146, 3573
CspCI CAANNNNNGTGG 2 cut(s) 1753, 1788
CviQI GTAC 6 cut(s) 148, 585, 727, 2718, 3146, 3573
EaeI YGGCCR 4 cut(s) 399, 871, 1030, 3517
Eam1104I CTCTTC 3 cut(s) 558, 1779, 2335
EarI CTCTTC 3 cut(s) 558, 1779, 2335
Eco130I CCWWGG 2 cut(s) 1094, 2689
Eco24I GRGCYC 4 cut(s) 27, 356, 2147, 3584
Eco31I GGTCTC 3 cut(s) 32, 1754, 2391
Eco47I GGWCC 7 cut(s) 14, 655, 1276, 1305, 2198, 2962, 3007
Eco47III AGCGCT 1 cut(s) 80
Eco57I CTGAAG 7 cut(s) 1101, 1151, 1947, 2123, 3078, 3461, 3887
EcoNI CCTNNNNNAGG 2 cut(s) 2034, 2972
EcoRI GAATTC 4 cut(s) 1148, 1567, 2224, 3638
EcoRII CCWGG 9 cut(s) 334, 415, 1402, 1749, 2074, 2204, 2335, 2498, 3795
EcoT14I CCWWGG 2 cut(s) 1094, 2689
EcoT22I ATGCAT 2 cut(s) 492, 985
EcoT38I GRGCYC 4 cut(s) 27, 356, 2147, 3584
ErhI CCWWGG 2 cut(s) 1094, 2689
FaqI GGGAC 9 cut(s) 248, 641, 794, 2238, 2265, 2343, 2424, 2451, 3004
FauI CCCGC 1 cut(s) 92
FauNDI CATATG 1 cut(s) 2107
FbaI TGATCA 1 cut(s) 3496
FblI GTMKAC 1 cut(s) 3898
FokI GGATG 6 cut(s) 851, 1375, 2577, 2720, 3362, 3665
FriOI GRGCYC 4 cut(s) 27, 356, 2147, 3584
FspBI CTAG 8 cut(s) 1326, 1473, 1509, 2561, 2595, 2690, 3219, 3773
GlaI GCGC 4 cut(s) 80, 551, 3125, 3409
GsaI CCCAGC 2 cut(s) 183, 2553
GsuI CTGGAG 2 cut(s) 1595, 2482
HaeII RGCGCY 1 cut(s) 82
HapII CCGG 4 cut(s) 47, 215, 350, 519
HgaI GACGC 1 cut(s) 580
HhaI GCGC 4 cut(s) 81, 552, 3126, 3410
Hin1I GRCGYC 2 cut(s) 195, 572
Hin6I GCGC 4 cut(s) 79, 550, 3124, 3408
HinP1I GCGC 4 cut(s) 79, 550, 3124, 3408
HincII GTYRAC 3 cut(s) 1119, 1756, 2484
HindII GTYRAC 3 cut(s) 1119, 1756, 2484
HindIII AAGCTT 3 cut(s) 1690, 3333, 3869
HpaI GTTAAC 2 cut(s) 1119, 1756
HpaII CCGG 4 cut(s) 47, 215, 350, 519
HpyCH4III ACNGT 5 cut(s) 423, 1679, 2609, 2717, 3577
HpyCH4IV ACGT 6 cut(s) 195, 2632, 2993, 3552, 3921, 4101
HpyF10VI GCNNNNNNNGC 9 cut(s) 87, 93, 249, 767, 812, 980, 1952, 3112, 3121
HpySE526I ACGT 6 cut(s) 195, 2632, 2993, 3552, 3921, 4101
Hsp92I GRCGYC 2 cut(s) 195, 572
HspAI GCGC 4 cut(s) 79, 550, 3124, 3408
Kpn2I TCCGGA 1 cut(s) 518
Ksp22I TGATCA 1 cut(s) 3496
KspAI GTTAAC 2 cut(s) 1119, 1756
KspI CCGCGG 1 cut(s) 438
LguI GCTCTTC 1 cut(s) 1779
LmnI GCTCC 4 cut(s) 86, 1960, 2081, 3325
LweI GCATC 9 cut(s) 624, 748, 860, 970, 992, 2803, 3039, 3171, 3976
MabI ACCWGGT 1 cut(s) 1402
MaeI CTAG 8 cut(s) 1326, 1473, 1509, 2561, 2595, 2690, 3219, 3773
MaeII ACGT 6 cut(s) 195, 2632, 2993, 3552, 3921, 4101
MflI RGATCY 5 cut(s) 526, 784, 1088, 1606, 3957
MhlI GDGCHC 5 cut(s) 27, 356, 2147, 3584, 3795
MlsI TGGCCA 3 cut(s) 873, 1032, 3519
MluNI TGGCCA 3 cut(s) 873, 1032, 3519
MmeI TCCRAC 5 cut(s) 33, 390, 1066, 2240, 2650
Mox20I TGGCCA 3 cut(s) 873, 1032, 3519
Mph1103I ATGCAT 2 cut(s) 492, 985
MroI TCCGGA 1 cut(s) 518
MroXI GAANNNNTTC 3 cut(s) 1164, 2349, 2698
MscI TGGCCA 3 cut(s) 873, 1032, 3519
MslI CAYNNNNRTG 3 cut(s) 1739, 2851, 3240
Msp20I TGGCCA 3 cut(s) 873, 1032, 3519
MspA1I CMGCKG 7 cut(s) 437, 1010, 1870, 2165, 2522, 4006, 4043
MspCI CTTAAG 2 cut(s) 1241, 3358
MspI CCGG 4 cut(s) 47, 215, 350, 519
Mva1269I GAATGC 2 cut(s) 2070, 2095
MvaI CCWGG 9 cut(s) 336, 417, 1404, 1751, 2076, 2206, 2337, 2500, 3797
MvnI CGCG 4 cut(s) 90, 138, 437, 3126
MwoI GCNNNNNNNGC 9 cut(s) 87, 93, 249, 767, 812, 980, 1952, 3112, 3121
NciI CCSGG 2 cut(s) 215, 351
NdeI CATATG 1 cut(s) 2107
NlaIV GGNNCC 6 cut(s) 16, 657, 1306, 1408, 2199, 3582
NmeAIII GCCGAG 1 cut(s) 232
NmuCI GTSAC 6 cut(s) 245, 825, 1016, 1381, 3922, 4014
NsiI ATGCAT 2 cut(s) 492, 985
NspI RCATGY 2 cut(s) 794, 3456
NspV TTCGAA 2 cut(s) 689, 2353
PaeI GCATGC 1 cut(s) 794
PagI TCATGA 2 cut(s) 454, 3472
PaqCI CACCTGC 1 cut(s) 1004
PasI CCCWGGG 1 cut(s) 2205
PciSI GCTCTTC 1 cut(s) 1779
PcsI WCGNNNNNNNCGW 4 cut(s) 105, 147, 204, 2680
PctI GAATGC 2 cut(s) 2070, 2095
PdmI GAANNNNTTC 3 cut(s) 1164, 2349, 2698
PflMI CCANNNNNTGG 1 cut(s) 2336
PfoI TCCNGGA 1 cut(s) 2335
Ple19I CGATCG 1 cut(s) 2940
Ppu21I YACGTR 1 cut(s) 2633
PsiI TTATAA 1 cut(s) 3078
Psp6I CCWGG 9 cut(s) 334, 415, 1402, 1749, 2074, 2204, 2335, 2498, 3795
PspFI CCCAGC 2 cut(s) 179, 2549
PspGI CCWGG 9 cut(s) 334, 415, 1402, 1749, 2074, 2204, 2335, 2498, 3795
PspN4I GGNNCC 6 cut(s) 16, 657, 1306, 1408, 2199, 3582
PspOMI GGGCCC 1 cut(s) 3580
PstI CTGCAG 4 cut(s) 1015, 2117, 3994, 4042
PstNI CAGNNNCTG 1 cut(s) 3184
PsuI RGATCY 5 cut(s) 526, 784, 1088, 1606, 3957
PvuI CGATCG 1 cut(s) 2940
PvuII CAGCTG 4 cut(s) 1010, 1870, 2165, 2522
RsaI GTAC 6 cut(s) 149, 586, 728, 2719, 3147, 3574
RsaNI GTAC 6 cut(s) 148, 585, 727, 2718, 3146, 3573
RseI CAYNNNNRTG 3 cut(s) 1739, 2851, 3240
SacII CCGCGG 1 cut(s) 438
SapI GCTCTTC 1 cut(s) 1779
SduI GDGCHC 5 cut(s) 27, 356, 2147, 3584, 3795
SexAI ACCWGGT 1 cut(s) 1402
SfaNI GCATC 9 cut(s) 624, 748, 860, 970, 992, 2803, 3039, 3171, 3976
SfcI CTRYAG 5 cut(s) 474, 1011, 2113, 3990, 4038
Sfr303I CCGCGG 1 cut(s) 438
SfuI TTCGAA 2 cut(s) 689, 2353
SgrBI CCGCGG 1 cut(s) 438
SinI GGWCC 7 cut(s) 14, 655, 1276, 1305, 2198, 2962, 3007
SmiMI CAYNNNNRTG 3 cut(s) 1739, 2851, 3240
SmlI CTYRAG 7 cut(s) 530, 1241, 1372, 2258, 2470, 3358, 3806
SmoI CTYRAG 7 cut(s) 530, 1241, 1372, 2258, 2470, 3358, 3806
SphI GCATGC 1 cut(s) 794
SspI AATATT 2 cut(s) 1235, 3493
SspMI CTAG 8 cut(s) 1326, 1473, 1509, 2561, 2595, 2690, 3219, 3773
StyI CCWWGG 2 cut(s) 1094, 2689
TaaI ACNGT 5 cut(s) 423, 1679, 2609, 2717, 3577
TaiI ACGT 6 cut(s) 198, 2635, 2996, 3555, 3924, 4104
TaqI TCGA 7 cut(s) 689, 1394, 2353, 2380, 3024, 3802, 3918
TaqII GACCGA 2 cut(s) 56, 643
TatI WGTACW 2 cut(s) 2717, 3145
TauI GCSGC 4 cut(s) 90, 440, 681, 4006
TscAI CASTG 9 cut(s) 552, 1619, 1684, 1857, 1930, 2097, 2533, 3762, 3915
TseFI GTSAC 6 cut(s) 245, 825, 1016, 1381, 3922, 4014
Tsp45I GTSAC 6 cut(s) 245, 825, 1016, 1381, 3922, 4014
TspGWI ACGGA 4 cut(s) 27, 109, 738, 2689
TspRI CASTG 9 cut(s) 552, 1619, 1684, 1857, 1930, 2097, 2533, 3762, 3915
Van91I CCANNNNNTGG 1 cut(s) 2336
Vha464I CTTAAG 2 cut(s) 1241, 3358
VneI GTGCAC 1 cut(s) 3791
VpaK11BI GGWCC 7 cut(s) 14, 655, 1276, 1305, 2198, 2962, 3007
XagI CCTNNNNNAGG 2 cut(s) 2034, 2972
XbaI TCTAGA 1 cut(s) 1472
XceI RCATGY 2 cut(s) 794, 3456
XcmI CCANNNNNNNNNTGG 1 cut(s) 881
XmaJI CCTAGG 1 cut(s) 2689
XmiI GTMKAC 1 cut(s) 3898
XmnI GAANNNNTTC 3 cut(s) 1164, 2349, 2698
XspI CTAG 8 cut(s) 1326, 1473, 1509, 2561, 2595, 2690, 3219, 3773
ZraI GACGTC 1 cut(s) 196
Zsp2I ATGCAT 2 cut(s) 492, 985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.