MD10G1064700.v1.1

TAF RNA Polymerase I subunit A

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0002593
Physical Location & Seq
Reverse (-)
8808021 .. 8821029
13009 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1064700.v1.1.491

Sequence Viewer

Length: 1869 bp
ATGGCCGACGCTCTCGCACCGGAACCCGAACTCTACTCACCACAACTGCACCAAAACACTCCAAACAGTCCAAGCAAACCGAACAGCCGCAAAAGAAAGTCCACCGACGACGGCAAAGCTCACCCCACAGTGCCTCCCCACGTTCAAAAACTCCTCAAACGAATTGTTTTGTCCCTGAGCAAGCCCTCCTATCTACTCGGTGTTGGCTCCACGAGACCCCGAGCCGAGCACCGCGCCCGGCTCACCAAGCTCATGCGGAAGCTCGTCAAGCAGCGCAACTGGGTCGAAGCCAGCGGAGTCTTGAGCGTGTTGTTGGAAGGCAGCCAGAAAGAAAGGTCGCCGGCGAACAACCGGTTCAAGTATTGGGTTTTGATGGAAATGCTTGAGCATTTGGATTCCAATGCTTATAAGGTTATGGAAGCTTATGCTGTTTGGGAGGGCAGGAATGCGATGGCAGGTTACTCGCCGGAGTACCGGTATGCGCTTCAACTGGAGCGTATTACTTTGTTGATTACTGAGGGAAATTACAATGAGCATGCGCATCACTCTACCGTGATTCTCACGCAATTAAAGGAGTTTGGAAATGAACCACTGTTAATTATGATTGTAGGATTGGCATACCAGCAACTCTGGTATTCCAATCTTCCAAATGAAATGAAATGGAGGGAGTCTGACCAGTTTTACACTGCTAGGGAATCAAATGAACTACTTCCACACTCGGAGGGGCATTATGCTGGTAATACTCACGAGGCTGGTACTGACATTCAATGTGGTTCAGAGACCTCTGTAATGAATGATAAAGTATCATATATTGGTGCCGACGGTGGCATACATAGAGATATATCTATGGGGGTCGACGACATGGAGATAGAAAATTCTCAACCAAACTTTGGGGCCCAAAGTTTTTATGCGGACCCTGATGAAGATACAGAAAATGAAAATGATGGCGAAATGCAGTATGTTCCCATTTTTTATGCCCTTGAGGGCTTGGAATCTCTGTTACTTCCCATACGATTGCCAGAATCTACAGATAGGGAAGATTTCATGAATTCACAGACGACAATTTTTAATGACAGTTTTAGGAATGCAGTGAAATATTTAAGGCGTGCTCTTCACTCCATGCCCCCAGTATTGCAGGCCTTGCTTCCTTTGGTACAGCTGTTGCTGATTGGAGGTCAAGTAAAAGAAGCCCTAAATGAGATTGACAACTGCTGTAGTCCAAATACTGCACTGCCACTTCGATTAAGGGCTACTCTTTTGGAGCAATTTGATCGTTACAACAGCGCCCTTCTTTCTACTTGTTTTGAGGATGTTTTAAAGAACGATCCAACCTGTTACGATTCATTGGCAAAACTTGTTCAACTGCATCAAAATGATGAATATAGTCCCGAGAGTCTACTGGAAATGATAGCTTTGCATTTAGATGCAACCTATGCAGACTACAACACCTGGAGAGAATTTGCTTTATGTTTCCTGAAGCTTTCTCAGTATGACGAGGACCGAATGTCCGTGTGTCTGAATGGAAATGAGGGTGAACATAAAGAGCGCTACTCCGTTTGTTTCAATAGGACCCCCAAAATGTTTATAGAGGGAAAATCTGGAGAGAGTTGGAGATTTCGCTGCAGATGGTGGCGTACACGTCATTTCAGCCACCAGATGCTAACCTCGGAGATAGCAACGGGTGAGTTGCAGCTCTTAACTTACAAAGCAGCATGCGCGGTGCATATGTACGGGTCAGAGTTTTCGTACTTTGTGGATGCTTATGCCTGTTTAGAGAAAGAAAATGAGTGGGATTTGCTCATGTTTTTGCAGACCAACATTCAAAATTCAGTTAGAATACAATCAAACTTTGAACAGAGAAGTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TAF1_subA

Protein Analysis

623

Amino Acids

71.52

Weight (kDa)

5.44

Isoelectric Point (pI)

43.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAF1_subA PF14929 88 - 588 1.8e-76 TAF RNA Polymerase I subunit A
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 408
Acc16I TGCGCA 1 cut(s) 540
Acc36I ACCTGC 1 cut(s) 446
AccB1I GGYRCC 1 cut(s) 815
AccB7I CCANNNNNTGG 1 cut(s) 890
AccI GTMKAC 2 cut(s) 855, 1396
AccII CGCG 2 cut(s) 234, 1718
AciI CCGC 6 cut(s) 88, 232, 256, 294, 911, 1718
AclWI GGATC 1 cut(s) 1319
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 874, 1048, 1457, 1825
AcuI CTGAAG 1 cut(s) 1496
AfaI GTAC 6 cut(s) 473, 757, 1155, 1636, 1730, 1748
AfeI AGCGCT 1 cut(s) 1547
AfiI CCNNNNNNNGG 1 cut(s) 890
AflIII ACRYGT 1 cut(s) 1637
AgeI ACCGGT 2 cut(s) 351, 474
AgsI TTSAA 8 cut(s) 146, 358, 488, 767, 1361, 1564, 1823, 1853
AhdI GACNNNNNGTC 1 cut(s) 1504
AjiI CACGTC 1 cut(s) 1640
AjnI CCWGG 1 cut(s) 1448
AluBI AGCT 8 cut(s) 119, 250, 262, 422, 1159, 1412, 1480, 1693
AluI AGCT 8 cut(s) 119, 250, 262, 422, 1159, 1412, 1480, 1693
Alw21I GWGCWC 2 cut(s) 231, 1111
Alw26I GTCTC 2 cut(s) 208, 773
AlwI GGATC 1 cut(s) 1319
Ama87I CYCGRG 2 cut(s) 219, 1388
Aor51HI AGCGCT 1 cut(s) 1547
AoxI GGCC 3 cut(s) 3, 894, 1137
ApaI GGGCCC 1 cut(s) 898
ApeKI GCWGC 5 cut(s) 271, 321, 1620, 1690, 1709
ApoI RAATTY 4 cut(s) 874, 1048, 1457, 1825
AsiGI ACCGGT 2 cut(s) 351, 474
Asp700I GAANNNNTTC 1 cut(s) 708
AspLEI GCGC 7 cut(s) 236, 276, 484, 541, 1286, 1548, 1718
AspS9I GGNCC 5 cut(s) 894, 895, 913, 1498, 1569
AsuC2I CCSGG 1 cut(s) 238
AsuHPI GGTGA 5 cut(s) 30, 113, 235, 1544, 1694
AvaI CYCGRG 2 cut(s) 219, 1388
AvaII GGWCC 3 cut(s) 913, 1498, 1569
BaeGI GKGCMC 1 cut(s) 898
BaeI ACNNNNGTAYC 2 cut(s) 1145, 1178
BanI GGYRCC 1 cut(s) 815
BanII GRGCYC 1 cut(s) 898
BauI CACGAG 2 cut(s) 211, 746
Bbv12I GWGCWC 2 cut(s) 231, 1111
BbvI GCAGC 5 cut(s) 283, 333, 1607, 1702, 1721
BccI CCATC 4 cut(s) 367, 445, 938, 1620
BceAI ACGGC 1 cut(s) 127
BcgI CGANNNNNNTGC 6 cut(s) 265, 299, 444, 478, 1253, 1287
BciT130I CCWGG 1 cut(s) 1450
BcnI CCSGG 1 cut(s) 238
BcoDI GTCTC 2 cut(s) 208, 773
BfaI CTAG 1 cut(s) 690
BfmI CTRYAG 3 cut(s) 1026, 1213, 1621
BfoI RGCGCY 2 cut(s) 1287, 1549
BfuAI ACCTGC 1 cut(s) 446
BisI GCNGC 6 cut(s) 88, 272, 322, 1621, 1691, 1710
BlsI GCNGC 6 cut(s) 89, 273, 323, 1622, 1692, 1711
Bme1390I CCNGG 2 cut(s) 238, 1450
Bme18I GGWCC 3 cut(s) 913, 1498, 1569
BmeRI GACNNNNNGTC 1 cut(s) 1504
BmeT110I CYCGRG 2 cut(s) 219, 1388
BmgBI CACGTC 1 cut(s) 1640
BmgT120I GGNCC 5 cut(s) 894, 895, 913, 1498, 1569
BmiI GGNNCC 7 cut(s) 24, 208, 817, 895, 896, 915, 1571
BmrFI CCNGG 2 cut(s) 238, 1450
BmrI ACTGGG 2 cut(s) 289, 1121
BmsI GCATC 5 cut(s) 550, 1375, 1414, 1647, 1747
BmuI ACTGGG 2 cut(s) 289, 1121
BplI GAGNNNNNCTC 2 cut(s) 1535, 1567
BpmI CTGGAG 3 cut(s) 512, 1471, 1620
Bpu10I CCTNAGC 1 cut(s) 176
BpuEI CTTGAG 3 cut(s) 322, 404, 1001
BpuMI CCSGG 1 cut(s) 238
BsaI GGTCTC 2 cut(s) 208, 773
BsaJI CCNNGG 1 cut(s) 1665
BsaWI WCCGGW 3 cut(s) 19, 351, 474
BsaXI ACNNNNNCTCC 6 cut(s) 118, 148, 461, 491, 1164, 1194
Bsc4I CCNNNNNNNGG 1 cut(s) 890
Bse118I RCCGGY 3 cut(s) 340, 351, 474
Bse1I ACTGG 5 cut(s) 284, 495, 676, 1127, 1404
BseBI CCWGG 1 cut(s) 1450
BseDI CCNNGG 1 cut(s) 1665
BseGI GGATG 2 cut(s) 1315, 1762
BseLI CCNNNNNNNGG 1 cut(s) 890
BseMII CTCAG 3 cut(s) 167, 507, 1499
BseNI ACTGG 5 cut(s) 284, 495, 676, 1127, 1404
BseRI GAGGAG 1 cut(s) 143
BseSI GKGCMC 1 cut(s) 898
BseXI GCAGC 5 cut(s) 283, 333, 1607, 1702, 1721
BsgI GTGCAG 2 cut(s) 32, 1212
Bsh1236I CGCG 2 cut(s) 234, 1718
BshFI GGCC 3 cut(s) 5, 896, 1139
BshNI GGYRCC 1 cut(s) 815
BshTI ACCGGT 2 cut(s) 351, 474
BsiHKAI GWGCWC 2 cut(s) 231, 1111
BsiHKCI CYCGRG 2 cut(s) 219, 1388
BsiSI CCGG 6 cut(s) 20, 238, 341, 352, 467, 475
BslFI GGGAC 2 cut(s) 157, 1371
BslI CCNNNNNNNGG 1 cut(s) 890
BsmAI GTCTC 2 cut(s) 208, 773
BsmFI GGGAC 2 cut(s) 157, 1371
BsmI GAATGC 2 cut(s) 451, 1090
BsnI GGCC 3 cut(s) 5, 896, 1139
Bso31I GGTCTC 2 cut(s) 208, 773
BsoBI CYCGRG 2 cut(s) 219, 1388
Bsp120I GGGCCC 1 cut(s) 894
Bsp1286I GDGCHC 3 cut(s) 231, 898, 1111
Bsp143I GATC 2 cut(s) 1270, 1324
BspACI CCGC 6 cut(s) 88, 232, 256, 294, 911, 1718
BspANI GGCC 3 cut(s) 5, 896, 1139
BspCNI CTCAG 3 cut(s) 168, 508, 1498
BspFNI CGCG 2 cut(s) 234, 1718
BspHI TCATGA 1 cut(s) 1044
BspLI GGNNCC 7 cut(s) 24, 208, 817, 895, 896, 915, 1571
BspMAI CTGCAG 1 cut(s) 1625
BspMI ACCTGC 1 cut(s) 446
BspPI GGATC 1 cut(s) 1319
BspQI GCTCTTC 1 cut(s) 1116
BspT107I GGYRCC 1 cut(s) 815
BspTNI GGTCTC 2 cut(s) 208, 773
BsrFI RCCGGY 3 cut(s) 340, 351, 474
BsrI ACTGG 5 cut(s) 284, 495, 676, 1127, 1404
BssAI RCCGGY 3 cut(s) 340, 351, 474
BssECI CCNNGG 1 cut(s) 1665
BssMI GATC 2 cut(s) 1270, 1324
BssSI CACGAG 2 cut(s) 211, 746
Bst2BI CACGAG 2 cut(s) 211, 746
Bst2UI CCWGG 1 cut(s) 1450
Bst4CI ACNGT 6 cut(s) 68, 130, 553, 594, 824, 1076
Bst6I CTCTTC 1 cut(s) 1116
BstAPI GCANNNNNTGC 2 cut(s) 1141, 1433
BstC8I GCNNGC 7 cut(s) 182, 292, 342, 537, 1107, 1137, 1714
BstDEI CTNAG 3 cut(s) 176, 516, 1485
BstF5I GGATG 2 cut(s) 1315, 1762
BstFNI CGCG 2 cut(s) 234, 1718
BstH2I RGCGCY 2 cut(s) 1287, 1549
BstHHI GCGC 7 cut(s) 236, 276, 484, 541, 1286, 1548, 1718
BstKTI GATC 2 cut(s) 1273, 1327
BstMAI GTCTC 2 cut(s) 208, 773
BstMBI GATC 2 cut(s) 1270, 1324
BstMWI GCNNNNNNNGC 5 cut(s) 247, 268, 1141, 1433, 1715
BstNI CCWGG 1 cut(s) 1450
BstNSI RCATGY 2 cut(s) 539, 1716
BstSCI CCNGG 2 cut(s) 236, 1448
BstSFI CTRYAG 3 cut(s) 1026, 1213, 1621
BstSLI GKGCMC 1 cut(s) 898
BstUI CGCG 2 cut(s) 234, 1718
BstV1I GCAGC 5 cut(s) 283, 333, 1607, 1702, 1721
BsuRI GGCC 3 cut(s) 5, 896, 1139
BtgZI GCGATG 1 cut(s) 464
BtrI CACGTC 1 cut(s) 1640
BtsCI GGATG 2 cut(s) 1315, 1762
BtsI GCAGTG 3 cut(s) 684, 1095, 1229
BtsIMutI CAGTG 5 cut(s) 135, 590, 684, 1095, 1229
BveI ACCTGC 1 cut(s) 446
Cac8I GCNNGC 7 cut(s) 182, 292, 342, 537, 1107, 1137, 1714
CciI TCATGA 1 cut(s) 1044
CfoI GCGC 7 cut(s) 236, 276, 484, 541, 1286, 1548, 1718
Cfr10I RCCGGY 3 cut(s) 340, 351, 474
Cfr13I GGNCC 5 cut(s) 894, 895, 913, 1498, 1569
CseI GACGC 1 cut(s) 17
Csp6I GTAC 6 cut(s) 472, 756, 1154, 1635, 1729, 1747
CspAI ACCGGT 2 cut(s) 351, 474
CviAII CATG 7 cut(s) 253, 536, 862, 1045, 1120, 1713, 1801
CviQI GTAC 6 cut(s) 472, 756, 1154, 1635, 1729, 1747
DdeI CTNAG 3 cut(s) 176, 516, 1485
DpnI GATC 2 cut(s) 1272, 1326
DpnII GATC 2 cut(s) 1270, 1324
DraI TTTAAA 1 cut(s) 1317
DriI GACNNNNNGTC 1 cut(s) 1504
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 1116
Eam1105I GACNNNNNGTC 1 cut(s) 1504
EarI CTCTTC 1 cut(s) 1116
Eco147I AGGCCT 1 cut(s) 1139
Eco24I GRGCYC 1 cut(s) 898
Eco31I GGTCTC 2 cut(s) 208, 773
Eco47I GGWCC 3 cut(s) 913, 1498, 1569
Eco47III AGCGCT 1 cut(s) 1547
Eco57I CTGAAG 1 cut(s) 1496
Eco88I CYCGRG 2 cut(s) 219, 1388
EcoO109I RGGNCCY 2 cut(s) 894, 1569
EcoRI GAATTC 1 cut(s) 1048
EcoRII CCWGG 1 cut(s) 1448
EcoT38I GRGCYC 1 cut(s) 898
FaeI CATG 7 cut(s) 256, 539, 865, 1048, 1123, 1716, 1804
FaqI GGGAC 2 cut(s) 157, 1371
FatI CATG 7 cut(s) 252, 535, 861, 1044, 1119, 1712, 1800
FauNDI CATATG 1 cut(s) 1725
FblI GTMKAC 2 cut(s) 855, 1396
Fnu4HI GCNGC 6 cut(s) 88, 272, 322, 1621, 1691, 1710
FokI GGATG 2 cut(s) 1322, 1769
FriOI GRGCYC 1 cut(s) 898
Fsp4HI GCNGC 6 cut(s) 88, 272, 322, 1621, 1691, 1710
FspAI RTGCGCAY 1 cut(s) 540
FspBI CTAG 1 cut(s) 690
FspI TGCGCA 1 cut(s) 540
GlaI GCGC 7 cut(s) 235, 275, 483, 540, 1285, 1547, 1717
GluI GCNGC 6 cut(s) 88, 272, 322, 1621, 1691, 1710
GsuI CTGGAG 3 cut(s) 512, 1471, 1620
HaeII RGCGCY 2 cut(s) 1287, 1549
HaeIII GGCC 3 cut(s) 5, 896, 1139
HapII CCGG 6 cut(s) 20, 238, 341, 352, 467, 475
HgaI GACGC 1 cut(s) 17
HhaI GCGC 7 cut(s) 236, 276, 484, 541, 1286, 1548, 1718
Hin1II CATG 7 cut(s) 256, 539, 865, 1048, 1123, 1716, 1804
Hin6I GCGC 7 cut(s) 234, 274, 482, 539, 1284, 1546, 1716
HinP1I GCGC 7 cut(s) 234, 274, 482, 539, 1284, 1546, 1716
HincII GTYRAC 1 cut(s) 856
HindII GTYRAC 1 cut(s) 856
HindIII AAGCTT 2 cut(s) 420, 1478
HinfI GANTC 9 cut(s) 297, 395, 556, 668, 695, 992, 1022, 1340, 1393
HpaII CCGG 6 cut(s) 20, 238, 341, 352, 467, 475
HphI GGTGA 5 cut(s) 30, 113, 235, 1544, 1694
Hpy166II GTNNAC 5 cut(s) 102, 856, 1397, 1535, 1637
Hpy188I TCNGA 6 cut(s) 673, 721, 778, 1518, 1669, 1738
Hpy188III TCNNGA 6 cut(s) 301, 746, 1045, 1388, 1474, 1599
Hpy8I GTNNAC 5 cut(s) 102, 856, 1397, 1535, 1637
Hpy99I CGWCG 5 cut(s) 11, 110, 113, 824, 860
HpyAV CCTTC 2 cut(s) 311, 1298
HpyCH4III ACNGT 6 cut(s) 68, 130, 553, 594, 824, 1076
HpyCH4IV ACGT 2 cut(s) 141, 1639
HpyF10VI GCNNNNNNNGC 5 cut(s) 247, 268, 1141, 1433, 1715
HpyF3I CTNAG 3 cut(s) 176, 516, 1485
HpySE526I ACGT 2 cut(s) 141, 1639
Hsp92II CATG 7 cut(s) 256, 539, 865, 1048, 1123, 1716, 1804
HspAI GCGC 7 cut(s) 234, 274, 482, 539, 1284, 1546, 1716
KroI GCCGGC 1 cut(s) 340
KroNI GCCGGC 1 cut(s) 342
Kzo9I GATC 2 cut(s) 1270, 1324
LguI GCTCTTC 1 cut(s) 1116
LmnI GCTCC 3 cut(s) 212, 493, 1261
Lsp1109I GCAGC 5 cut(s) 283, 333, 1607, 1702, 1721
LweI GCATC 5 cut(s) 550, 1375, 1414, 1647, 1747
MaeI CTAG 1 cut(s) 690
MaeII ACGT 2 cut(s) 141, 1639
MaeIII GTNAC 4 cut(s) 458, 999, 1274, 1334
MalI GATC 2 cut(s) 1272, 1326
MboI GATC 2 cut(s) 1270, 1324
MboII GAAGA 4 cut(s) 635, 935, 1049, 1103
MhlI GDGCHC 3 cut(s) 231, 898, 1111
MlyI GAGTC 3 cut(s) 306, 677, 1402
MmeI TCCRAC 3 cut(s) 294, 1352, 1589
MreI CGCCGGCG 1 cut(s) 340
MroNI GCCGGC 1 cut(s) 340
MroXI GAANNNNTTC 1 cut(s) 708
MseI TTAA 7 cut(s) 569, 596, 1068, 1100, 1244, 1316, 1697
MslI CAYNNNNRTG 2 cut(s) 1371, 1422
MspA1I CMGCKG 2 cut(s) 294, 1159
MspI CCGG 6 cut(s) 20, 238, 341, 352, 467, 475
MspR9I CCNGG 2 cut(s) 238, 1450
Mva1269I GAATGC 2 cut(s) 451, 1090
MvaI CCWGG 1 cut(s) 1450
MvnI CGCG 2 cut(s) 234, 1718
MwoI GCNNNNNNNGC 5 cut(s) 247, 268, 1141, 1433, 1715
NaeI GCCGGC 1 cut(s) 342
NciI CCSGG 1 cut(s) 238
NdeI CATATG 1 cut(s) 1725
NdeII GATC 2 cut(s) 1270, 1324
NgoMIV GCCGGC 1 cut(s) 340
NlaIII CATG 7 cut(s) 256, 539, 865, 1048, 1123, 1716, 1804
NlaIV GGNNCC 7 cut(s) 24, 208, 817, 895, 896, 915, 1571
NmeAIII GCCGAG 1 cut(s) 250
NsbI TGCGCA 1 cut(s) 540
NspI RCATGY 2 cut(s) 539, 1716
PaeI GCATGC 2 cut(s) 539, 1716
PagI TCATGA 1 cut(s) 1044
PceI AGGCCT 1 cut(s) 1139
PciSI GCTCTTC 1 cut(s) 1116
PctI GAATGC 2 cut(s) 451, 1090
PdiI GCCGGC 1 cut(s) 342
PdmI GAANNNNTTC 1 cut(s) 708
PfeI GAWTC 6 cut(s) 395, 556, 695, 992, 1022, 1340
PflMI CCANNNNNTGG 1 cut(s) 890
PinAI ACCGGT 2 cut(s) 351, 474
PkrI GCNGC 6 cut(s) 89, 273, 323, 1622, 1692, 1711
PleI GAGTC 3 cut(s) 305, 676, 1401
PpsI GAGTC 3 cut(s) 305, 676, 1401
PpuMI RGGWCCY 1 cut(s) 1569
PsiI TTATAA 1 cut(s) 408
Psp5II RGGWCCY 1 cut(s) 1569
Psp6I CCWGG 1 cut(s) 1448
PspGI CCWGG 1 cut(s) 1448
PspN4I GGNNCC 7 cut(s) 24, 208, 817, 895, 896, 915, 1571
PspOMI GGGCCC 1 cut(s) 894
PspPI GGNCC 5 cut(s) 894, 895, 913, 1498, 1569
PspPPI RGGWCCY 1 cut(s) 1569
PstI CTGCAG 1 cut(s) 1625
PvuII CAGCTG 1 cut(s) 1159
RsaI GTAC 6 cut(s) 473, 757, 1155, 1636, 1730, 1748
RsaNI GTAC 6 cut(s) 472, 756, 1154, 1635, 1729, 1747
RseI CAYNNNNRTG 2 cut(s) 1371, 1422
SalI GTCGAC 1 cut(s) 854
SapI GCTCTTC 1 cut(s) 1116
SaqAI TTAA 7 cut(s) 569, 596, 1068, 1100, 1244, 1316, 1697
SatI GCNGC 6 cut(s) 88, 272, 322, 1621, 1691, 1710
Sau3AI GATC 2 cut(s) 1270, 1324
Sau96I GGNCC 5 cut(s) 894, 895, 913, 1498, 1569
SchI GAGTC 3 cut(s) 306, 677, 1402
ScrFI CCNGG 2 cut(s) 238, 1450
SduI GDGCHC 3 cut(s) 231, 898, 1111
SfaNI GCATC 5 cut(s) 550, 1375, 1414, 1647, 1747
SfcI CTRYAG 3 cut(s) 1026, 1213, 1621
SgrAI CRCCGGYG 1 cut(s) 340
SinI GGWCC 3 cut(s) 913, 1498, 1569
SmiMI CAYNNNNRTG 2 cut(s) 1371, 1422
SmlI CTYRAG 3 cut(s) 301, 383, 980
SmoI CTYRAG 3 cut(s) 301, 383, 980
SphI GCATGC 2 cut(s) 539, 1716
SseBI AGGCCT 1 cut(s) 1139
SsiI CCGC 6 cut(s) 88, 232, 256, 294, 911, 1718
SspI AATATT 1 cut(s) 1097
SspMI CTAG 1 cut(s) 690
StuI AGGCCT 1 cut(s) 1139
StyD4I CCNGG 2 cut(s) 236, 1448
TaaI ACNGT 6 cut(s) 68, 130, 553, 594, 824, 1076
TaiI ACGT 2 cut(s) 144, 1642
TaqI TCGA 3 cut(s) 285, 855, 1240
TaqII GACCGA 1 cut(s) 1515
TauI GCSGC 1 cut(s) 90
TfiI GAWTC 6 cut(s) 395, 556, 695, 992, 1022, 1340
Tru1I TTAA 7 cut(s) 569, 596, 1068, 1100, 1244, 1316, 1697
Tru9I TTAA 7 cut(s) 569, 596, 1068, 1100, 1244, 1316, 1697
TscAI CASTG 5 cut(s) 135, 597, 691, 1095, 1236
TseI GCWGC 5 cut(s) 271, 321, 1620, 1690, 1709
TspGWI ACGGA 2 cut(s) 1498, 1543
TspRI CASTG 5 cut(s) 135, 597, 691, 1095, 1236
Van91I CCANNNNNTGG 1 cut(s) 890
VpaK11BI GGWCC 3 cut(s) 913, 1498, 1569
XapI RAATTY 4 cut(s) 874, 1048, 1457, 1825
XceI RCATGY 2 cut(s) 539, 1716
XmiI GTMKAC 2 cut(s) 855, 1396
XmnI GAANNNNTTC 1 cut(s) 708
XspI CTAG 1 cut(s) 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.