Rh6BG527100

TAF RNA Polymerase I subunit A

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0002593
Physical Location & Seq
Forward (+)
71848269 .. 71854340
6072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG527100.1

Sequence Viewer

Length: 1893 bp
ATGGCTGAATCTCCTATACCAGAAATTCCGATTATTCCCGAAAGCCGGAAAAGAAAGTACACCGACGAGGCAGCACTGTCGGGGCACCTAAAACGCATCGTTTTATCACTAAGCAAGCCGTCGACTCTGCTCGGCATCGGCGCCTCAAAACCTAGGGCGGTGCACCGCTCCAAGCTCGAAAAGCTTCTCCGGAAGCTCGTGATTCACCACAACTGGGTCGAGGCCAGCGGCGTCCTCAGCGTGTTGCTCGGCGGCGGAGCCAGCGACAGGTCGCCGGCGAACAACCGCTTCATGTATTGGGTTTTGCTGGAAATGGTGGAGCGGTTGTCTGAGATGGAAAAGGAGGAGCGTTTGCCTGGTAATTACTCCAAGGAGGTGTGGATTAAGAATGTGTTTGAAGCTTGGGAGAAGAAGAATGATAAGATGAAGGCAGAGTTAGAAGAGTACAGACATGCTGTTGAACTTGACCGCATCTCGCTCTCGCTTGCAAAAGGGAATCTTATGGAGGCTGAAGCCGGTGCTTTCGGTCTCATGCAAGCACATGGTTTTCGAAATGACCCTCTTCGAAATATAATTGTCGGATTGACATTCCAGCAATTGTGGTATTCCAAGCTCCCAAAAGAGATGCAGTGGAGGGAGGCTGACCAGTTTTACACTAGGGAATCAAATGAACGAGTTGCAGGCTCAGAGGGGCATGGCTCTATTAACAGTAACGAGGCTGGTAGCGCCATTCATTGTGATTCAGACACCTCTGTCATGAATGATAAAGTAGAGAATGTACCACCTATTGTTGCTGTTGATGCTGACAGTGGCTTACATAGAGAGATCTCTGTGGAGGTTGTTGACATGGAAGTAGAAATTTCTCCACCGAAATTTGAGACCCAAAATTTCTATGCGGACTCTGCTGAAAATTCAGAAGATGAAGCTGCTTTATCTGATCATGGTGGTCAAATGCAGTATGCTCCCATTTTCTCTGAACTTGAGGGGTTGGAGTCATTGTTACTGCCCATACGATTGCCAGAGTCTCTCGATAATCATGAAGATAAGAATATTTTTAATGACTATTACAAGGATGCAGTGAAGTACTTACGACATGCTCTTCACTCTTCACCCCCGGTATTGGTAGCCTTACATCCTTTGATACAGCTGTTGCTGATTGGAGGTCAAGTTAAAGAGGCCCTAGATGAGATTGAATATTGTTGTAATTTTTCAAACACAGCGCTGCCTACTCGGGTATTATGCTCTAATGCCTACATGTTGGACAGATTAAGGTCTAGTCTTCTGCAGCAATTTGATTCTAATAACAAACCTGTGCTTTCCACTTGTCTGGAGGAAAACTTAAGGAAGGATCCTACATGTTGCGATTCATTGGAAAAGCTTGTTCTGTTGCATCAAAATGATAATTATAGTCCTGAGTCCCTGCTTGAAATGATAGCTTTGCATTTAGATGCCACCAATGCTGAATACAACATATGGAGAGAGTATGCTATGTGTTTCCTGAAGCTTTCTCAGTATGAAGAGGACAGGATGTCAGTGTGTCTGAATGGAAATGAAGGTGGACATAAACCACGGTACTCTGTTTCTTTCAATAAGACCCCGAAAATATTTATAAAGGGACAATCTGGAAAGAATTGGAAATTGCGCTGTAGATGGTGGTCTACGCGGCACTTCAGCCATGATATTCTTGCATCAGAGATTGCAGCAGGTGATTTGGAGCTCTTAACTTACAAAGCAGCGAGTGCAGTGCATATGTATGGATCAGAGTTCTATTACGTTGTGGATGCTCTTTGCTGCTTAGAGAAAGAAAGTGAGAAGGACTTGCTCTGTTTTTTGCAAATGCACATTCGAAATTCTGTTCGAATTTATTCAAATTCTCGACAGAGAACTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TAF1_subA

Protein Analysis

630

Amino Acids

71.67

Weight (kDa)

5.54

Isoelectric Point (pI)

45.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAF1_subA PF14929 66 - 594 2.8e-66 TAF RNA Polymerase I subunit A
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1610
AarI CACCTGC 1 cut(s) 1694
AasI GACNNNNNNGTC 1 cut(s) 752
Acc36I ACCTGC 1 cut(s) 1694
AccB1I GGYRCC 2 cut(s) 84, 140
AccBSI CCGCTC 2 cut(s) 168, 322
AccI GTMKAC 2 cut(s) 122, 1658
AccII CGCG 1 cut(s) 1663
AccIII TCCGGA 1 cut(s) 189
AclWI GGATC 3 cut(s) 1343, 1356, 1765
AcsI RAATTY 8 cut(s) 24, 858, 872, 886, 910, 1849, 1860, 1870
AcuI CTGAAG 3 cut(s) 531, 1520, 1654
AcyI GRCGYC 2 cut(s) 141, 231
AfaI GTAC 5 cut(s) 59, 446, 780, 1085, 1574
AfeI AGCGCT 1 cut(s) 1221
AfiI CCNNNNNNNGG 4 cut(s) 45, 214, 267, 1120
AflII CTTAAG 1 cut(s) 1339
AflIII ACRYGT 2 cut(s) 1254, 1355
AgsI TTSAA 7 cut(s) 398, 461, 1193, 1212, 1427, 1588, 1869
AhdI GACNNNNNGTC 1 cut(s) 1528
AjnI CCWGG 1 cut(s) 355
Alw21I GWGCWC 2 cut(s) 165, 1719
Alw26I GTCTC 3 cut(s) 533, 872, 1029
Alw44I GTGCAC 1 cut(s) 161
AlwI GGATC 3 cut(s) 1343, 1356, 1765
Ama87I CYCGRG 1 cut(s) 1230
Aor13HI TCCGGA 1 cut(s) 189
Aor51HI AGCGCT 1 cut(s) 1221
AoxI GGCC 2 cut(s) 222, 1176
ApaLI GTGCAC 1 cut(s) 161
ApeKI GCWGC 7 cut(s) 71, 926, 1222, 1285, 1700, 1733, 1791
ApoI RAATTY 8 cut(s) 24, 858, 872, 886, 910, 1849, 1860, 1870
Asp700I GAANNNNTTC 2 cut(s) 183, 1864
AspA2I CCTAGG 1 cut(s) 152
AspLEI GCGC 4 cut(s) 143, 728, 1222, 1644
AspS9I GGNCC 1 cut(s) 1177
AsuC2I CCSGG 1 cut(s) 1115
AsuHPI GGTGA 3 cut(s) 197, 1101, 1718
AsuII TTCGAA 4 cut(s) 550, 565, 1846, 1858
AvaI CYCGRG 1 cut(s) 1230
AvrII CCTAGG 1 cut(s) 152
BaeGI GKGCMC 2 cut(s) 87, 165
BaeI ACNNNNGTAYC 2 cut(s) 1133, 1166
BamHI GGATCC 1 cut(s) 1348
BanI GGYRCC 2 cut(s) 84, 140
BanII GRGCYC 1 cut(s) 1719
BauI CACGAG 1 cut(s) 197
BbsI GAAGAC 1 cut(s) 1271
Bbv12I GWGCWC 2 cut(s) 165, 1719
BbvCI CCTCAGC 1 cut(s) 236
BbvI GCAGC 7 cut(s) 83, 913, 1209, 1297, 1712, 1745, 1778
BccI CCATC 2 cut(s) 328, 1644
BceAI ACGGC 1 cut(s) 103
BcgI CGANNNNNNTGC 4 cut(s) 60, 94, 1726, 1760
BciT130I CCWGG 1 cut(s) 357
BclI TGATCA 1 cut(s) 937
BcnI CCSGG 1 cut(s) 1115
BcoDI GTCTC 3 cut(s) 533, 872, 1029
BfaI CTAG 4 cut(s) 153, 657, 1181, 1275
BfmI CTRYAG 2 cut(s) 1283, 1645
BfoI RGCGCY 3 cut(s) 144, 729, 1223
BfrI CTTAAG 1 cut(s) 1339
BfuAI ACCTGC 1 cut(s) 1694
BglII AGATCT 1 cut(s) 825
BlnI CCTAGG 1 cut(s) 152
BmcAI AGTACT 1 cut(s) 1085
Bme1390I CCNGG 2 cut(s) 357, 1115
BmeRI GACNNNNNGTC 1 cut(s) 1528
BmeT110I CYCGRG 1 cut(s) 1230
BmgT120I GGNCC 1 cut(s) 1177
BmiI GGNNCC 4 cut(s) 86, 142, 259, 1350
BmrFI CCNGG 2 cut(s) 357, 1115
BmrI ACTGGG 1 cut(s) 223
BmuI ACTGGG 1 cut(s) 223
BpiI GAAGAC 1 cut(s) 1271
BpmI CTGGAG 1 cut(s) 1349
Bpu10I CCTNAGC 1 cut(s) 236
Bpu14I TTCGAA 4 cut(s) 550, 565, 1846, 1858
BpuEI CTTGAG 1 cut(s) 1001
BpuMI CCSGG 1 cut(s) 1115
BsaHI GRCGYC 2 cut(s) 141, 231
BsaI GGTCTC 2 cut(s) 533, 872
BsaJI CCNNGG 4 cut(s) 152, 369, 1113, 1568
BsaWI WCCGGW 1 cut(s) 189
BsaXI ACNNNNNCTCC 6 cut(s) 311, 341, 983, 1013, 1152, 1182
Bsc4I CCNNNNNNNGG 4 cut(s) 45, 214, 267, 1120
Bse118I RCCGGY 2 cut(s) 274, 515
Bse1I ACTGG 2 cut(s) 218, 646
BseAI TCCGGA 1 cut(s) 189
BseBI CCWGG 1 cut(s) 357
BseDI CCNNGG 4 cut(s) 152, 369, 1113, 1568
BseGI GGATG 4 cut(s) 1078, 1132, 1533, 1786
BseLI CCNNNNNNNGG 4 cut(s) 45, 214, 267, 1120
BseMII CTCAG 5 cut(s) 250, 321, 699, 1404, 1523
BseNI ACTGG 2 cut(s) 218, 646
BseRI GAGGAG 1 cut(s) 359
BseSI GKGCMC 2 cut(s) 87, 165
BseXI GCAGC 7 cut(s) 83, 913, 1209, 1297, 1712, 1745, 1778
BsgI GTGCAG 1 cut(s) 1761
Bsh1236I CGCG 1 cut(s) 1663
BshFI GGCC 2 cut(s) 224, 1178
BshNI GGYRCC 2 cut(s) 84, 140
BsiHKAI GWGCWC 2 cut(s) 165, 1719
BsiHKCI CYCGRG 1 cut(s) 1230
BsiSI CCGG 5 cut(s) 46, 190, 275, 516, 1115
BslFI GGGAC 2 cut(s) 1402, 1629
BslI CCNNNNNNNGG 4 cut(s) 45, 214, 267, 1120
BsmAI GTCTC 3 cut(s) 533, 872, 1029
BsmFI GGGAC 2 cut(s) 1402, 1629
BsnI GGCC 2 cut(s) 224, 1178
Bso31I GGTCTC 2 cut(s) 533, 872
BsoBI CYCGRG 1 cut(s) 1230
Bsp119I TTCGAA 4 cut(s) 550, 565, 1846, 1858
Bsp1286I GDGCHC 3 cut(s) 87, 165, 1719
Bsp13I TCCGGA 1 cut(s) 189
Bsp143I GATC 4 cut(s) 825, 937, 1348, 1757
BspANI GGCC 2 cut(s) 224, 1178
BspCNI CTCAG 5 cut(s) 249, 322, 698, 1405, 1522
BspEI TCCGGA 1 cut(s) 189
BspFNI CGCG 1 cut(s) 1663
BspHI TCATGA 2 cut(s) 756, 1036
BspLI GGNNCC 4 cut(s) 86, 142, 259, 1350
BspMAI CTGCAG 1 cut(s) 1287
BspMI ACCTGC 1 cut(s) 1694
BspPI GGATC 3 cut(s) 1343, 1356, 1765
BspQI GCTCTTC 1 cut(s) 1104
BspT104I TTCGAA 4 cut(s) 550, 565, 1846, 1858
BspT107I GGYRCC 2 cut(s) 84, 140
BspTI CTTAAG 1 cut(s) 1339
BspTNI GGTCTC 2 cut(s) 533, 872
BsrBI CCGCTC 2 cut(s) 168, 322
BsrFI RCCGGY 2 cut(s) 274, 515
BsrI ACTGG 2 cut(s) 218, 646
BssAI RCCGGY 2 cut(s) 274, 515
BssECI CCNNGG 4 cut(s) 152, 369, 1113, 1568
BssMI GATC 4 cut(s) 825, 937, 1348, 1757
BssNI GRCGYC 2 cut(s) 141, 231
BssSI CACGAG 1 cut(s) 197
BssT1I CCWWGG 2 cut(s) 152, 369
Bst2BI CACGAG 1 cut(s) 197
Bst2UI CCWGG 1 cut(s) 357
Bst4CI ACNGT 4 cut(s) 78, 710, 809, 1572
Bst6I CTCTTC 5 cut(s) 435, 567, 1104, 1111, 1512
BstACI GRCGYC 2 cut(s) 141, 231
BstAFI CTTAAG 1 cut(s) 1339
BstAPI GCANNNNNTGC 1 cut(s) 1739
BstBI TTCGAA 4 cut(s) 550, 565, 1846, 1858
BstC8I GCNNGC 7 cut(s) 116, 226, 262, 276, 486, 537, 682
BstDEI CTNAG 7 cut(s) 110, 236, 330, 685, 1413, 1509, 1795
BstDSI CCRYGG 1 cut(s) 1568
BstF5I GGATG 4 cut(s) 1078, 1132, 1533, 1786
BstFNI CGCG 1 cut(s) 1663
BstH2I RGCGCY 3 cut(s) 144, 729, 1223
BstHHI GCGC 4 cut(s) 143, 728, 1222, 1644
BstKTI GATC 4 cut(s) 828, 940, 1351, 1760
BstMAI GTCTC 3 cut(s) 533, 872, 1029
BstMBI GATC 4 cut(s) 825, 937, 1348, 1757
BstMWI GCNNNNNNNGC 8 cut(s) 181, 237, 261, 725, 800, 902, 1457, 1739
BstNI CCWGG 1 cut(s) 357
BstNSI RCATGY 4 cut(s) 455, 1097, 1258, 1359
BstSCI CCNGG 2 cut(s) 355, 1113
BstSFI CTRYAG 2 cut(s) 1283, 1645
BstSLI GKGCMC 2 cut(s) 87, 165
BstUI CGCG 1 cut(s) 1663
BstV1I GCAGC 7 cut(s) 83, 913, 1209, 1297, 1712, 1745, 1778
BstV2I GAAGAC 1 cut(s) 1271
BstX2I RGATCY 2 cut(s) 825, 1348
BstXI CCANNNNNNTGG 1 cut(s) 1327
BstYI RGATCY 2 cut(s) 825, 1348
BsuRI GGCC 2 cut(s) 224, 1178
BtgI CCRYGG 1 cut(s) 1568
BtsCI GGATG 4 cut(s) 1078, 1132, 1533, 1786
BtsI GCAGTG 3 cut(s) 635, 1083, 1749
BtsIMutI CAGTG 6 cut(s) 74, 635, 814, 1083, 1539, 1749
BveI ACCTGC 1 cut(s) 1694
Cac8I GCNNGC 7 cut(s) 116, 226, 262, 276, 486, 537, 682
CciI TCATGA 2 cut(s) 756, 1036
CfoI GCGC 4 cut(s) 143, 728, 1222, 1644
Cfr10I RCCGGY 2 cut(s) 274, 515
Cfr13I GGNCC 1 cut(s) 1177
CseI GACGC 1 cut(s) 220
Csp6I GTAC 5 cut(s) 58, 445, 779, 1084, 1573
CviQI GTAC 5 cut(s) 58, 445, 779, 1084, 1573
DdeI CTNAG 7 cut(s) 110, 236, 330, 685, 1413, 1509, 1795
DinI GGCGCC 1 cut(s) 142
DpnI GATC 4 cut(s) 827, 939, 1350, 1759
DpnII GATC 4 cut(s) 825, 937, 1348, 1757
DrdI GACNNNNNNGTC 1 cut(s) 752
DriI GACNNNNNGTC 1 cut(s) 1528
DseDI GACNNNNNNGTC 1 cut(s) 752
Eam1104I CTCTTC 5 cut(s) 435, 567, 1104, 1111, 1512
Eam1105I GACNNNNNGTC 1 cut(s) 1528
EarI CTCTTC 5 cut(s) 435, 567, 1104, 1111, 1512
EciI GGCGGA 1 cut(s) 270
Ecl136II GAGCTC 1 cut(s) 1717
Eco130I CCWWGG 2 cut(s) 152, 369
Eco24I GRGCYC 1 cut(s) 1719
Eco31I GGTCTC 2 cut(s) 533, 872
Eco47III AGCGCT 1 cut(s) 1221
Eco53kI GAGCTC 1 cut(s) 1717
Eco57I CTGAAG 3 cut(s) 531, 1520, 1654
Eco88I CYCGRG 1 cut(s) 1230
EcoICRI GAGCTC 1 cut(s) 1717
EcoO109I RGGNCCY 1 cut(s) 1177
EcoRII CCWGG 1 cut(s) 355
EcoT14I CCWWGG 2 cut(s) 152, 369
EcoT38I GRGCYC 1 cut(s) 1719
EgeI GGCGCC 1 cut(s) 142
EheI GGCGCC 1 cut(s) 142
ErhI CCWWGG 2 cut(s) 152, 369
FalI AAGNNNNNCTT 2 cut(s) 483, 515
FaqI GGGAC 2 cut(s) 1402, 1629
FauNDI CATATG 2 cut(s) 1472, 1749
FbaI TGATCA 1 cut(s) 937
FblI GTMKAC 2 cut(s) 122, 1658
FokI GGATG 4 cut(s) 1085, 1119, 1540, 1793
FriOI GRGCYC 1 cut(s) 1719
FspBI CTAG 4 cut(s) 153, 657, 1181, 1275
GlaI GCGC 4 cut(s) 142, 727, 1221, 1643
GsuI CTGGAG 1 cut(s) 1349
HaeII RGCGCY 3 cut(s) 144, 729, 1223
HaeIII GGCC 2 cut(s) 224, 1178
HapII CCGG 5 cut(s) 46, 190, 275, 516, 1115
HgaI GACGC 1 cut(s) 220
HhaI GCGC 4 cut(s) 143, 728, 1222, 1644
Hin1I GRCGYC 2 cut(s) 141, 231
Hin6I GCGC 4 cut(s) 141, 726, 1220, 1642
HinP1I GCGC 4 cut(s) 141, 726, 1220, 1642
HincII GTYRAC 2 cut(s) 123, 844
HindII GTYRAC 2 cut(s) 123, 844
HindIII AAGCTT 4 cut(s) 182, 399, 1376, 1502
HpaII CCGG 5 cut(s) 46, 190, 275, 516, 1115
HphI GGTGA 3 cut(s) 197, 1101, 1718
Hpy166II GTNNAC 6 cut(s) 60, 123, 163, 844, 1559, 1659
Hpy8I GTNNAC 6 cut(s) 60, 123, 163, 844, 1559, 1659
Hpy99I CGWCG 2 cut(s) 68, 124
HpyAV CCTTC 4 cut(s) 421, 1339, 1547, 1807
HpyCH4III ACNGT 4 cut(s) 78, 710, 809, 1572
HpyCH4IV ACGT 1 cut(s) 1773
HpyF10VI GCNNNNNNNGC 8 cut(s) 181, 237, 261, 725, 800, 902, 1457, 1739
HpyF3I CTNAG 7 cut(s) 110, 236, 330, 685, 1413, 1509, 1795
HpySE526I ACGT 1 cut(s) 1773
Hsp92I GRCGYC 2 cut(s) 141, 231
HspAI GCGC 4 cut(s) 141, 726, 1220, 1642
KasI GGCGCC 1 cut(s) 140
Kpn2I TCCGGA 1 cut(s) 189
KroI GCCGGC 1 cut(s) 274
KroNI GCCGGC 1 cut(s) 276
Ksp22I TGATCA 1 cut(s) 937
Kzo9I GATC 4 cut(s) 825, 937, 1348, 1757
LguI GCTCTTC 1 cut(s) 1104
LmnI GCTCC 7 cut(s) 173, 257, 319, 346, 618, 967, 1714
Lsp1109I GCAGC 7 cut(s) 83, 913, 1209, 1297, 1712, 1745, 1778
MaeI CTAG 4 cut(s) 153, 657, 1181, 1275
MaeII ACGT 1 cut(s) 1773
MaeIII GTNAC 2 cut(s) 710, 999
MalI GATC 4 cut(s) 827, 939, 1350, 1759
MbiI CCGCTC 2 cut(s) 168, 322
MboI GATC 4 cut(s) 825, 937, 1348, 1757
MfeI CAATTG 1 cut(s) 596
MflI RGATCY 2 cut(s) 825, 1348
MhlI GDGCHC 3 cut(s) 87, 165, 1719
Mly113I GGCGCC 1 cut(s) 141
MlyI GAGTC 5 cut(s) 118, 893, 1001, 1031, 1424
MmeI TCCRAC 3 cut(s) 559, 969, 1239
MreI CGCCGGCG 1 cut(s) 274
MroI TCCGGA 1 cut(s) 189
MroNI GCCGGC 1 cut(s) 274
MroXI GAANNNNTTC 2 cut(s) 183, 1864
MseI TTAA 7 cut(s) 384, 705, 1056, 1170, 1268, 1340, 1721
MslI CAYNNNNRTG 3 cut(s) 1395, 1446, 1752
MspA1I CMGCKG 2 cut(s) 228, 1147
MspCI CTTAAG 1 cut(s) 1339
MspI CCGG 5 cut(s) 46, 190, 275, 516, 1115
MspR9I CCNGG 2 cut(s) 357, 1115
MunI CAATTG 1 cut(s) 596
MvaI CCWGG 1 cut(s) 357
MvnI CGCG 1 cut(s) 1663
MwoI GCNNNNNNNGC 8 cut(s) 181, 237, 261, 725, 800, 902, 1457, 1739
NaeI GCCGGC 1 cut(s) 276
NarI GGCGCC 1 cut(s) 141
NciI CCSGG 1 cut(s) 1115
NdeI CATATG 2 cut(s) 1472, 1749
NdeII GATC 4 cut(s) 825, 937, 1348, 1757
NgoMIV GCCGGC 1 cut(s) 274
NlaIV GGNNCC 4 cut(s) 86, 142, 259, 1350
NmeAIII GCCGAG 2 cut(s) 111, 228
NspI RCATGY 4 cut(s) 455, 1097, 1258, 1359
NspV TTCGAA 4 cut(s) 550, 565, 1846, 1858
PagI TCATGA 2 cut(s) 756, 1036
PaqCI CACCTGC 1 cut(s) 1694
PciI ACATGT 2 cut(s) 1254, 1355
PciSI GCTCTTC 1 cut(s) 1104
PdiI GCCGGC 1 cut(s) 276
PdmI GAANNNNTTC 2 cut(s) 183, 1864
PfeI GAWTC 7 cut(s) 8, 202, 496, 662, 740, 1295, 1364
PleI GAGTC 5 cut(s) 118, 893, 1000, 1030, 1423
PluTI GGCGCC 1 cut(s) 144
PpsI GAGTC 5 cut(s) 118, 893, 1000, 1030, 1423
PscI ACATGT 2 cut(s) 1254, 1355
PsiI TTATAA 1 cut(s) 1610
Psp124BI GAGCTC 1 cut(s) 1719
Psp6I CCWGG 1 cut(s) 355
PspGI CCWGG 1 cut(s) 355
PspN4I GGNNCC 4 cut(s) 86, 142, 259, 1350
PspPI GGNCC 1 cut(s) 1177
PstI CTGCAG 1 cut(s) 1287
PsuI RGATCY 2 cut(s) 825, 1348
PvuII CAGCTG 1 cut(s) 1147
RsaI GTAC 5 cut(s) 59, 446, 780, 1085, 1574
RsaNI GTAC 5 cut(s) 58, 445, 779, 1084, 1573
RseI CAYNNNNRTG 3 cut(s) 1395, 1446, 1752
SacI GAGCTC 1 cut(s) 1719
SalI GTCGAC 1 cut(s) 121
SapI GCTCTTC 1 cut(s) 1104
SaqAI TTAA 7 cut(s) 384, 705, 1056, 1170, 1268, 1340, 1721
Sau3AI GATC 4 cut(s) 825, 937, 1348, 1757
Sau96I GGNCC 1 cut(s) 1177
ScaI AGTACT 1 cut(s) 1085
SchI GAGTC 5 cut(s) 118, 893, 1001, 1031, 1424
ScrFI CCNGG 2 cut(s) 357, 1115
SduI GDGCHC 3 cut(s) 87, 165, 1719
SfcI CTRYAG 2 cut(s) 1283, 1645
SfoI GGCGCC 1 cut(s) 142
SfuI TTCGAA 4 cut(s) 550, 565, 1846, 1858
SgrAI CRCCGGYG 1 cut(s) 274
SmiMI CAYNNNNRTG 3 cut(s) 1395, 1446, 1752
SmlI CTYRAG 2 cut(s) 980, 1339
SmoI CTYRAG 2 cut(s) 980, 1339
SspDI GGCGCC 1 cut(s) 140
SspI AATATT 3 cut(s) 1051, 1196, 1605
SspMI CTAG 4 cut(s) 153, 657, 1181, 1275
SstI GAGCTC 1 cut(s) 1719
StyD4I CCNGG 2 cut(s) 355, 1113
StyI CCWWGG 2 cut(s) 152, 369
TaaI ACNGT 4 cut(s) 78, 710, 809, 1572
TaiI ACGT 1 cut(s) 1776
TaqI TCGA 9 cut(s) 122, 177, 219, 550, 565, 1029, 1846, 1858, 1876
TaqII GACCGA 1 cut(s) 515
TatI WGTACW 3 cut(s) 57, 444, 1083
TauI GCSGC 3 cut(s) 231, 255, 1666
TfiI GAWTC 7 cut(s) 8, 202, 496, 662, 740, 1295, 1364
Tru1I TTAA 7 cut(s) 384, 705, 1056, 1170, 1268, 1340, 1721
Tru9I TTAA 7 cut(s) 384, 705, 1056, 1170, 1268, 1340, 1721
TscAI CASTG 6 cut(s) 81, 635, 814, 1083, 1539, 1749
TseI GCWGC 7 cut(s) 71, 926, 1222, 1285, 1700, 1733, 1791
TspRI CASTG 6 cut(s) 81, 635, 814, 1083, 1539, 1749
Vha464I CTTAAG 1 cut(s) 1339
VneI GTGCAC 1 cut(s) 161
XapI RAATTY 8 cut(s) 24, 858, 872, 886, 910, 1849, 1860, 1870
XceI RCATGY 4 cut(s) 455, 1097, 1258, 1359
XmaJI CCTAGG 1 cut(s) 152
XmiI GTMKAC 2 cut(s) 122, 1658
XmnI GAANNNNTTC 2 cut(s) 183, 1864
XspI CTAG 4 cut(s) 153, 657, 1181, 1275
ZrmI AGTACT 1 cut(s) 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.