Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012252.1

Orthogroup ID

OG0002593

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 7571

Gene Structure 7571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012252.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1774 bp

atggctgaatctcctataccagaaattccgattattcccgaaagccggaaaagaaagtacaccgacgaggaagaactgtcggggcacctaaaacgcatcgttttatcattaagcaagccgtcgactctgctcggcatcggcgcctcaaaacctagggcggtgcaccgcgccaagctcgaaaagcttctccggaagctcgtgattcaccacaactgggtcgaggccagcggcgtcctcagcgtgttgatcggcggcggagccagcgacaggtcgccggcgaacaaccgcttcatgtattgggttttgctggaaatggtggagcggttgtctgagatggaaaaggaggagcgtttgcctggtaattactccaaggaggtgtggattaagaatgtgtttgaagcttgggagaagaagaatgataagatgaaggcagagttagaagagtacagacatgctgttgaacttgagcgcatctcgctctcccttgcaaaagggaatcttatggaggctgaagccggtgctttcggtctcatgcaaccaaatggttttcgaaatgaccctcttcgaaatatgattgtcggattgacattccagcaattgtggtattccaagctcccaaaagagatgcagtggagggaggctgaccagttttacactagggaatcaaatgaacgagttgcaggctcagaggggcatggctctattaacagtaacgaggctggtagcgccattcattgtgattcagacacctctgtcatgaatgataaagtagagaatgtaccacctattgttgctgttgatgctgacagtggcttacatagagagatctctgtggaggttgttgacatggaagtagaaatttctccaccgaaatttgagacccaaaatttctatgcggactctgctgaaaattcagaagatgaagctgctttatctgatcatggtggtcaaatgcagtatgctcccattttctctgaacttgaggggttggagtcattgttactgcccatacgatttccagagtctctcgataatcatgaagataagaatatttttaatgactattacaaggatgcagtgaagtacttacgacatgctcttcactattcattcccggtattggtagccttacatcctttgatacagctgttgctgtttggaggtcaagttaaagaggccctagatgagattgaatattgttgtaatttttcaaacacagcgctgcctactcgattaaggtctagtcttctgcagcaatttgattctaataacaaacctgtgctttccacttgtctggaggaaaacttaaggaaggagcctacatgttgcgattcattggaaaagcttgttctgttgcatcaaaatgataattatggtcctgagtccctgcttgaaatgatagctttgcatttagatgccaccaatgctgaatacaacatatggagagagtatgctatgtgtttcctgaagctttctcagtatgaagaggacaggatgtcggtgtgtctgaatggaaatgaaggtggacataaaccacggtactctgtttctttcaataagaccccgaaaatatttataaagggacaatctggaaagaattggaaattgcgctgtagatggtggtctacgcggcacttcagccatgatattcttgcatcagagattgcagcaggtgatttggagctcttaacttacaaagcagcgagtgcagtgcatatgtatggatcagagttctattacgttgtggatgctctttgctgcttagagaaagaaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAF1_subA

Protein Analysis

591

Amino Acids

67.32

Weight (kDa)

5.31

Isoelectric Point (pI)

42.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002593)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53200 AT1G53200
fragaria_vesca	FvH4_3g19060 FvH4_3g19060 FvH4_3g19060 FvH4_3g19060 FvH4_3g19060 FvH4_3g19060 FvH4_3g19060 FvH4_3g19060
malus_domestica	MD03G1237200.v1.1 MD10G1064700.v1.1
prunus_persica	Prupe.4G172200_v2.0.a1
pyrus_communis	pycom03g18310
rosa_chinensis	RchiOBHm_Chr5g0031851 RchiOBHm_Chr6g0312691
rosa_laevigata	RLG00000013275 RLG00000033353
rosa_multiflora	Rmu_sc0002188.1_g000001 Rmu_sc0007517.1_g000001 Rmu_sc0011639.1_g000001 Rmu_sc0012252.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048420
rosa_rugosa	Rorug04G0355200 Rorug05G0128100 Rorug05G0128200 Rorug06G0398300 Rorug06G0398300 Rorug06G0398400 Rorug06G0398500
rosa_samantha	Rh5AG222300 Rh5BG222600 Rh5CG245700 Rh5DG227400 Rh6AG515800 Rh6BG527100 Rh6CG532000 Rh6DG518000
rosa_wichuraiana	Rw5G020260 Rw6G044820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1577
AarI	CACCTGC	1 cut(s)	1661
AasI	GACNNNNNNGTC	1 cut(s)	752
Acc36I	ACCTGC	1 cut(s)	1661
AccB1I	GGYRCC	2 cut(s)	84, 140
AccBSI	CCGCTC	1 cut(s)	322
AccI	GTMKAC	2 cut(s)	122, 1625
AccII	CGCG	2 cut(s)	168, 1630
AccIII	TCCGGA	1 cut(s)	189
AciI	CCGC	9 cut(s)	158, 166, 228, 252, 255, 286, 322, 896, 1630
AclWI	GGATC	1 cut(s)	1732
AcsI	RAATTY	5 cut(s)	24, 858, 872, 886, 910
AcuI	CTGAAG	3 cut(s)	531, 1487, 1621
AcyI	GRCGYC	2 cut(s)	141, 231
AfaI	GTAC	5 cut(s)	59, 446, 780, 1085, 1541
AfeI	AGCGCT	1 cut(s)	1221
AfiI	CCNNNNNNNGG	4 cut(s)	45, 214, 267, 1120
AflII	CTTAAG	1 cut(s)	1306
AflIII	ACRYGT	1 cut(s)	1322
AgsI	TTSAA	6 cut(s)	398, 461, 1193, 1212, 1394, 1555
AhdI	GACNNNNNGTC	1 cut(s)	1495
AjnI	CCWGG	1 cut(s)	355
Alw21I	GWGCWC	2 cut(s)	165, 1686
Alw26I	GTCTC	3 cut(s)	533, 872, 1029
Alw44I	GTGCAC	1 cut(s)	161
AlwI	GGATC	1 cut(s)	1732
Aor13HI	TCCGGA	1 cut(s)	189
Aor51HI	AGCGCT	1 cut(s)	1221
AoxI	GGCC	2 cut(s)	222, 1176
ApaLI	GTGCAC	1 cut(s)	161
ApeKI	GCWGC	6 cut(s)	926, 1222, 1252, 1667, 1700, 1758
ApoI	RAATTY	5 cut(s)	24, 858, 872, 886, 910
Asp700I	GAANNNNTTC	1 cut(s)	183
AspA2I	CCTAGG	1 cut(s)	152
AspLEI	GCGC	6 cut(s)	143, 170, 471, 728, 1222, 1611
AspS9I	GGNCC	2 cut(s)	1177, 1376
AsuC2I	CCSGG	1 cut(s)	1115
AsuHPI	GGTGA	2 cut(s)	197, 1685
AsuII	TTCGAA	2 cut(s)	550, 565
AvaII	GGWCC	1 cut(s)	1376
AvrII	CCTAGG	1 cut(s)	152
BaeGI	GKGCMC	2 cut(s)	87, 165
BaeI	ACNNNNGTAYC	2 cut(s)	1133, 1166
BanI	GGYRCC	2 cut(s)	84, 140
BanII	GRGCYC	1 cut(s)	1686
BauI	CACGAG	1 cut(s)	197
BbsI	GAAGAC	1 cut(s)	1238
Bbv12I	GWGCWC	2 cut(s)	165, 1686
BbvCI	CCTCAGC	1 cut(s)	236
BbvI	GCAGC	6 cut(s)	913, 1209, 1264, 1679, 1712, 1745
BccI	CCATC	2 cut(s)	328, 1611
BceAI	ACGGC	1 cut(s)	103
BcgI	CGANNNNNNTGC	2 cut(s)	1693, 1727
BciT130I	CCWGG	1 cut(s)	357
BclI	TGATCA	1 cut(s)	937
BcnI	CCSGG	1 cut(s)	1115
BcoDI	GTCTC	3 cut(s)	533, 872, 1029
BfaI	CTAG	4 cut(s)	153, 657, 1181, 1242
BfmI	CTRYAG	2 cut(s)	1250, 1612
BfoI	RGCGCY	3 cut(s)	144, 729, 1223
BfrI	CTTAAG	1 cut(s)	1306
BfuAI	ACCTGC	1 cut(s)	1661
BglII	AGATCT	1 cut(s)	825
BisI	GCNGC	9 cut(s)	229, 253, 927, 1223, 1253, 1631, 1668, 1701, 1759
BlnI	CCTAGG	1 cut(s)	152
BlsI	GCNGC	9 cut(s)	230, 254, 928, 1224, 1254, 1632, 1669, 1702, 1760
BmcAI	AGTACT	1 cut(s)	1085
Bme1390I	CCNGG	2 cut(s)	357, 1115
Bme18I	GGWCC	1 cut(s)	1376
BmeRI	GACNNNNNGTC	1 cut(s)	1495
BmgT120I	GGNCC	2 cut(s)	1177, 1376
BmiI	GGNNCC	4 cut(s)	86, 142, 259, 1317
BmrFI	CCNGG	2 cut(s)	357, 1115
BmrI	ACTGGG	1 cut(s)	223
BmuI	ACTGGG	1 cut(s)	223
BpiI	GAAGAC	1 cut(s)	1238
BplI	GAGNNNNNCTC	2 cut(s)	458, 490
BpmI	CTGGAG	1 cut(s)	1316
Bpu10I	CCTNAGC	1 cut(s)	236
Bpu14I	TTCGAA	2 cut(s)	550, 565
BpuEI	CTTGAG	2 cut(s)	485, 1001
BpuMI	CCSGG	1 cut(s)	1115
BsaHI	GRCGYC	2 cut(s)	141, 231
BsaI	GGTCTC	2 cut(s)	533, 872
BsaJI	CCNNGG	3 cut(s)	152, 369, 1535
BsaWI	WCCGGW	1 cut(s)	189
BsaXI	ACNNNNNCTCC	6 cut(s)	311, 341, 983, 1013, 1152, 1182
Bsc4I	CCNNNNNNNGG	4 cut(s)	45, 214, 267, 1120
Bse118I	RCCGGY	2 cut(s)	274, 515
Bse1I	ACTGG	2 cut(s)	218, 646
BseAI	TCCGGA	1 cut(s)	189
BseBI	CCWGG	1 cut(s)	357
BseDI	CCNNGG	3 cut(s)	152, 369, 1535
BseGI	GGATG	4 cut(s)	1078, 1132, 1500, 1753
BseLI	CCNNNNNNNGG	4 cut(s)	45, 214, 267, 1120
BseMII	CTCAG	5 cut(s)	250, 321, 699, 1371, 1490
BseNI	ACTGG	2 cut(s)	218, 646
BseRI	GAGGAG	1 cut(s)	359
BseSI	GKGCMC	2 cut(s)	87, 165
BseXI	GCAGC	6 cut(s)	913, 1209, 1264, 1679, 1712, 1745
BsgI	GTGCAG	1 cut(s)	1728
Bsh1236I	CGCG	2 cut(s)	168, 1630
BshFI	GGCC	2 cut(s)	224, 1178
BshNI	GGYRCC	2 cut(s)	84, 140
BsiHKAI	GWGCWC	2 cut(s)	165, 1686
BsiSI	CCGG	5 cut(s)	46, 190, 275, 516, 1115
BslFI	GGGAC	2 cut(s)	1369, 1596
BslI	CCNNNNNNNGG	4 cut(s)	45, 214, 267, 1120
BsmAI	GTCTC	3 cut(s)	533, 872, 1029
BsmFI	GGGAC	2 cut(s)	1369, 1596
BsnI	GGCC	2 cut(s)	224, 1178
Bso31I	GGTCTC	2 cut(s)	533, 872
Bsp119I	TTCGAA	2 cut(s)	550, 565
Bsp1286I	GDGCHC	3 cut(s)	87, 165, 1686
Bsp13I	TCCGGA	1 cut(s)	189
Bsp143I	GATC	4 cut(s)	246, 825, 937, 1724
BspACI	CCGC	9 cut(s)	158, 166, 228, 252, 255, 286, 322, 896, 1630
BspANI	GGCC	2 cut(s)	224, 1178
BspCNI	CTCAG	5 cut(s)	249, 322, 698, 1372, 1489
BspEI	TCCGGA	1 cut(s)	189
BspFNI	CGCG	2 cut(s)	168, 1630
BspHI	TCATGA	2 cut(s)	756, 1036
BspLI	GGNNCC	4 cut(s)	86, 142, 259, 1317
BspMAI	CTGCAG	1 cut(s)	1254
BspMI	ACCTGC	1 cut(s)	1661
BspPI	GGATC	1 cut(s)	1732
BspQI	GCTCTTC	1 cut(s)	1104
BspT104I	TTCGAA	2 cut(s)	550, 565
BspT107I	GGYRCC	2 cut(s)	84, 140
BspTI	CTTAAG	1 cut(s)	1306
BspTNI	GGTCTC	2 cut(s)	533, 872
BsrBI	CCGCTC	1 cut(s)	322
BsrFI	RCCGGY	2 cut(s)	274, 515
BsrI	ACTGG	2 cut(s)	218, 646
BssAI	RCCGGY	2 cut(s)	274, 515
BssECI	CCNNGG	3 cut(s)	152, 369, 1535
BssMI	GATC	4 cut(s)	246, 825, 937, 1724
BssNI	GRCGYC	2 cut(s)	141, 231
BssSI	CACGAG	1 cut(s)	197
BssT1I	CCWWGG	2 cut(s)	152, 369
Bst2BI	CACGAG	1 cut(s)	197
Bst2UI	CCWGG	1 cut(s)	357
Bst4CI	ACNGT	4 cut(s)	78, 710, 809, 1539
Bst6I	CTCTTC	4 cut(s)	435, 567, 1104, 1479
BstACI	GRCGYC	2 cut(s)	141, 231
BstAFI	CTTAAG	1 cut(s)	1306
BstAPI	GCANNNNNTGC	1 cut(s)	1706
BstBI	TTCGAA	2 cut(s)	550, 565
BstC8I	GCNNGC	5 cut(s)	116, 226, 262, 276, 682
BstDEI	CTNAG	6 cut(s)	236, 330, 685, 1380, 1476, 1762
BstDSI	CCRYGG	1 cut(s)	1535
BstF5I	GGATG	4 cut(s)	1078, 1132, 1500, 1753
BstFNI	CGCG	2 cut(s)	168, 1630
BstH2I	RGCGCY	3 cut(s)	144, 729, 1223
BstHHI	GCGC	6 cut(s)	143, 170, 471, 728, 1222, 1611
BstKTI	GATC	4 cut(s)	249, 828, 940, 1727
BstMAI	GTCTC	3 cut(s)	533, 872, 1029
BstMBI	GATC	4 cut(s)	246, 825, 937, 1724
BstMWI	GCNNNNNNNGC	9 cut(s)	181, 237, 261, 475, 725, 800, 902, 1424, 1706
BstNI	CCWGG	1 cut(s)	357
BstNSI	RCATGY	3 cut(s)	455, 1097, 1326
BstSCI	CCNGG	2 cut(s)	355, 1113
BstSFI	CTRYAG	2 cut(s)	1250, 1612
BstSLI	GKGCMC	2 cut(s)	87, 165
BstUI	CGCG	2 cut(s)	168, 1630
BstV1I	GCAGC	6 cut(s)	913, 1209, 1264, 1679, 1712, 1745
BstV2I	GAAGAC	1 cut(s)	1238
BstX2I	RGATCY	1 cut(s)	825
BstXI	CCANNNNNNTGG	1 cut(s)	1294
BstYI	RGATCY	1 cut(s)	825
BsuRI	GGCC	2 cut(s)	224, 1178
BtgI	CCRYGG	1 cut(s)	1535
BtsCI	GGATG	4 cut(s)	1078, 1132, 1500, 1753
BtsI	GCAGTG	3 cut(s)	635, 1083, 1716
BtsIMutI	CAGTG	4 cut(s)	635, 814, 1083, 1716
BveI	ACCTGC	1 cut(s)	1661
Cac8I	GCNNGC	5 cut(s)	116, 226, 262, 276, 682
CciI	TCATGA	2 cut(s)	756, 1036
CfoI	GCGC	6 cut(s)	143, 170, 471, 728, 1222, 1611
Cfr10I	RCCGGY	2 cut(s)	274, 515
Cfr13I	GGNCC	2 cut(s)	1177, 1376
CseI	GACGC	1 cut(s)	220
Csp6I	GTAC	5 cut(s)	58, 445, 779, 1084, 1540
CviQI	GTAC	5 cut(s)	58, 445, 779, 1084, 1540
DdeI	CTNAG	6 cut(s)	236, 330, 685, 1380, 1476, 1762
DinI	GGCGCC	1 cut(s)	142
DpnI	GATC	4 cut(s)	248, 827, 939, 1726
DpnII	GATC	4 cut(s)	246, 825, 937, 1724
DrdI	GACNNNNNNGTC	1 cut(s)	752
DriI	GACNNNNNGTC	1 cut(s)	1495
DseDI	GACNNNNNNGTC	1 cut(s)	752
Eam1104I	CTCTTC	4 cut(s)	435, 567, 1104, 1479
Eam1105I	GACNNNNNGTC	1 cut(s)	1495
EarI	CTCTTC	4 cut(s)	435, 567, 1104, 1479
EciI	GGCGGA	1 cut(s)	270
Ecl136II	GAGCTC	1 cut(s)	1684
Eco130I	CCWWGG	2 cut(s)	152, 369
Eco24I	GRGCYC	1 cut(s)	1686
Eco31I	GGTCTC	2 cut(s)	533, 872
Eco47I	GGWCC	1 cut(s)	1376
Eco47III	AGCGCT	1 cut(s)	1221
Eco53kI	GAGCTC	1 cut(s)	1684
Eco57I	CTGAAG	3 cut(s)	531, 1487, 1621
EcoICRI	GAGCTC	1 cut(s)	1684
EcoO109I	RGGNCCY	1 cut(s)	1177
EcoRII	CCWGG	1 cut(s)	355
EcoT14I	CCWWGG	2 cut(s)	152, 369
EcoT38I	GRGCYC	1 cut(s)	1686
EgeI	GGCGCC	1 cut(s)	142
EheI	GGCGCC	1 cut(s)	142
ErhI	CCWWGG	2 cut(s)	152, 369
FalI	AAGNNNNNCTT	2 cut(s)	483, 515
FaqI	GGGAC	2 cut(s)	1369, 1596
FauNDI	CATATG	2 cut(s)	1439, 1716
FbaI	TGATCA	1 cut(s)	937
FblI	GTMKAC	2 cut(s)	122, 1625
Fnu4HI	GCNGC	9 cut(s)	229, 253, 927, 1223, 1253, 1631, 1668, 1701, 1759
FokI	GGATG	4 cut(s)	1085, 1119, 1507, 1760
FriOI	GRGCYC	1 cut(s)	1686
Fsp4HI	GCNGC	9 cut(s)	229, 253, 927, 1223, 1253, 1631, 1668, 1701, 1759
FspBI	CTAG	4 cut(s)	153, 657, 1181, 1242
GlaI	GCGC	6 cut(s)	142, 169, 470, 727, 1221, 1610
GluI	GCNGC	9 cut(s)	229, 253, 927, 1223, 1253, 1631, 1668, 1701, 1759
GsuI	CTGGAG	1 cut(s)	1316
HaeII	RGCGCY	3 cut(s)	144, 729, 1223
HaeIII	GGCC	2 cut(s)	224, 1178
HapII	CCGG	5 cut(s)	46, 190, 275, 516, 1115
HgaI	GACGC	1 cut(s)	220
HhaI	GCGC	6 cut(s)	143, 170, 471, 728, 1222, 1611
Hin1I	GRCGYC	2 cut(s)	141, 231
Hin6I	GCGC	6 cut(s)	141, 168, 469, 726, 1220, 1609
HinP1I	GCGC	6 cut(s)	141, 168, 469, 726, 1220, 1609
HincII	GTYRAC	2 cut(s)	123, 844
HindII	GTYRAC	2 cut(s)	123, 844
HindIII	AAGCTT	4 cut(s)	182, 399, 1343, 1469
HpaII	CCGG	5 cut(s)	46, 190, 275, 516, 1115
HphI	GGTGA	2 cut(s)	197, 1685
Hpy166II	GTNNAC	6 cut(s)	60, 123, 163, 844, 1526, 1626
Hpy8I	GTNNAC	6 cut(s)	60, 123, 163, 844, 1526, 1626
Hpy99I	CGWCG	2 cut(s)	68, 124
HpyAV	CCTTC	3 cut(s)	421, 1306, 1514
HpyCH4III	ACNGT	4 cut(s)	78, 710, 809, 1539
HpyCH4IV	ACGT	1 cut(s)	1740
HpyF10VI	GCNNNNNNNGC	9 cut(s)	181, 237, 261, 475, 725, 800, 902, 1424, 1706
HpyF3I	CTNAG	6 cut(s)	236, 330, 685, 1380, 1476, 1762
HpySE526I	ACGT	1 cut(s)	1740
Hsp92I	GRCGYC	2 cut(s)	141, 231
HspAI	GCGC	6 cut(s)	141, 168, 469, 726, 1220, 1609
KasI	GGCGCC	1 cut(s)	140
Kpn2I	TCCGGA	1 cut(s)	189
KroI	GCCGGC	1 cut(s)	274
KroNI	GCCGGC	1 cut(s)	276
Ksp22I	TGATCA	1 cut(s)	937
Kzo9I	GATC	4 cut(s)	246, 825, 937, 1724
LguI	GCTCTTC	1 cut(s)	1104
LmnI	GCTCC	7 cut(s)	257, 319, 346, 618, 967, 1315, 1681
Lsp1109I	GCAGC	6 cut(s)	913, 1209, 1264, 1679, 1712, 1745
MaeI	CTAG	4 cut(s)	153, 657, 1181, 1242
MaeII	ACGT	1 cut(s)	1740
MaeIII	GTNAC	2 cut(s)	710, 999
MalI	GATC	4 cut(s)	248, 827, 939, 1726
MbiI	CCGCTC	1 cut(s)	322
MboI	GATC	4 cut(s)	246, 825, 937, 1724
MfeI	CAATTG	1 cut(s)	596
MflI	RGATCY	1 cut(s)	825
MhlI	GDGCHC	3 cut(s)	87, 165, 1686
Mly113I	GGCGCC	1 cut(s)	141
MlyI	GAGTC	5 cut(s)	118, 893, 1001, 1031, 1391
MmeI	TCCRAC	2 cut(s)	559, 969
MreI	CGCCGGCG	1 cut(s)	274
MroI	TCCGGA	1 cut(s)	189
MroNI	GCCGGC	1 cut(s)	274
MroXI	GAANNNNTTC	1 cut(s)	183
MseI	TTAA	8 cut(s)	110, 384, 705, 1056, 1170, 1235, 1307, 1688
MslI	CAYNNNNRTG	3 cut(s)	1362, 1413, 1719
MspA1I	CMGCKG	2 cut(s)	228, 1147
MspCI	CTTAAG	1 cut(s)	1306
MspI	CCGG	5 cut(s)	46, 190, 275, 516, 1115
MspR9I	CCNGG	2 cut(s)	357, 1115
MunI	CAATTG	1 cut(s)	596
MvaI	CCWGG	1 cut(s)	357
MvnI	CGCG	2 cut(s)	168, 1630
MwoI	GCNNNNNNNGC	9 cut(s)	181, 237, 261, 475, 725, 800, 902, 1424, 1706
NaeI	GCCGGC	1 cut(s)	276
NarI	GGCGCC	1 cut(s)	141
NciI	CCSGG	1 cut(s)	1115
NdeI	CATATG	2 cut(s)	1439, 1716
NdeII	GATC	4 cut(s)	246, 825, 937, 1724
NgoMIV	GCCGGC	1 cut(s)	274
NlaIV	GGNNCC	4 cut(s)	86, 142, 259, 1317
NmeAIII	GCCGAG	1 cut(s)	111
NspI	RCATGY	3 cut(s)	455, 1097, 1326
NspV	TTCGAA	2 cut(s)	550, 565
PagI	TCATGA	2 cut(s)	756, 1036
PaqCI	CACCTGC	1 cut(s)	1661
PciI	ACATGT	1 cut(s)	1322
PciSI	GCTCTTC	1 cut(s)	1104
PdiI	GCCGGC	1 cut(s)	276
PdmI	GAANNNNTTC	1 cut(s)	183
PfeI	GAWTC	7 cut(s)	8, 202, 496, 662, 740, 1262, 1331
PkrI	GCNGC	9 cut(s)	230, 254, 928, 1224, 1254, 1632, 1669, 1702, 1760
PleI	GAGTC	5 cut(s)	118, 893, 1000, 1030, 1390
PluTI	GGCGCC	1 cut(s)	144
PpsI	GAGTC	5 cut(s)	118, 893, 1000, 1030, 1390
PscI	ACATGT	1 cut(s)	1322
PsiI	TTATAA	1 cut(s)	1577
Psp124BI	GAGCTC	1 cut(s)	1686
Psp6I	CCWGG	1 cut(s)	355
PspGI	CCWGG	1 cut(s)	355
PspN4I	GGNNCC	4 cut(s)	86, 142, 259, 1317
PspPI	GGNCC	2 cut(s)	1177, 1376
PstI	CTGCAG	1 cut(s)	1254
PsuI	RGATCY	1 cut(s)	825
PvuII	CAGCTG	1 cut(s)	1147
RsaI	GTAC	5 cut(s)	59, 446, 780, 1085, 1541
RsaNI	GTAC	5 cut(s)	58, 445, 779, 1084, 1540
RseI	CAYNNNNRTG	3 cut(s)	1362, 1413, 1719
SacI	GAGCTC	1 cut(s)	1686
SalI	GTCGAC	1 cut(s)	121
SapI	GCTCTTC	1 cut(s)	1104
SaqAI	TTAA	8 cut(s)	110, 384, 705, 1056, 1170, 1235, 1307, 1688
SatI	GCNGC	9 cut(s)	229, 253, 927, 1223, 1253, 1631, 1668, 1701, 1759
Sau3AI	GATC	4 cut(s)	246, 825, 937, 1724
Sau96I	GGNCC	2 cut(s)	1177, 1376
ScaI	AGTACT	1 cut(s)	1085
SchI	GAGTC	5 cut(s)	118, 893, 1001, 1031, 1391
ScrFI	CCNGG	2 cut(s)	357, 1115
SduI	GDGCHC	3 cut(s)	87, 165, 1686
SfcI	CTRYAG	2 cut(s)	1250, 1612
SfoI	GGCGCC	1 cut(s)	142
SfuI	TTCGAA	2 cut(s)	550, 565
SgrAI	CRCCGGYG	1 cut(s)	274
SinI	GGWCC	1 cut(s)	1376
SmiMI	CAYNNNNRTG	3 cut(s)	1362, 1413, 1719
SmlI	CTYRAG	3 cut(s)	464, 980, 1306
SmoI	CTYRAG	3 cut(s)	464, 980, 1306
SsiI	CCGC	9 cut(s)	158, 166, 228, 252, 255, 286, 322, 896, 1630
SspDI	GGCGCC	1 cut(s)	140
SspI	AATATT	3 cut(s)	1051, 1196, 1572
SspMI	CTAG	4 cut(s)	153, 657, 1181, 1242
SstI	GAGCTC	1 cut(s)	1686
StyD4I	CCNGG	2 cut(s)	355, 1113
StyI	CCWWGG	2 cut(s)	152, 369
TaaI	ACNGT	4 cut(s)	78, 710, 809, 1539
TaiI	ACGT	1 cut(s)	1743
TaqI	TCGA	7 cut(s)	122, 177, 219, 550, 565, 1029, 1231
TaqII	GACCGA	1 cut(s)	515
TatI	WGTACW	3 cut(s)	57, 444, 1083
TauI	GCSGC	3 cut(s)	231, 255, 1633
TfiI	GAWTC	7 cut(s)	8, 202, 496, 662, 740, 1262, 1331
Tru1I	TTAA	8 cut(s)	110, 384, 705, 1056, 1170, 1235, 1307, 1688
Tru9I	TTAA	8 cut(s)	110, 384, 705, 1056, 1170, 1235, 1307, 1688
TscAI	CASTG	4 cut(s)	635, 814, 1083, 1716
TseI	GCWGC	6 cut(s)	926, 1222, 1252, 1667, 1700, 1758
TspRI	CASTG	4 cut(s)	635, 814, 1083, 1716
Vha464I	CTTAAG	1 cut(s)	1306
VneI	GTGCAC	1 cut(s)	161
VpaK11BI	GGWCC	1 cut(s)	1376
XapI	RAATTY	5 cut(s)	24, 858, 872, 886, 910
XceI	RCATGY	3 cut(s)	455, 1097, 1326
XmaJI	CCTAGG	1 cut(s)	152
XmiI	GTMKAC	2 cut(s)	122, 1625
XmnI	GAANNNNTTC	1 cut(s)	183
XspI	CTAG	4 cut(s)	153, 657, 1181, 1242
ZrmI	AGTACT	1 cut(s)	1085

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.