MD10G1297500.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
38491963 .. 38494850
2888 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1297500.v1.1.491

Sequence Viewer

Length: 1620 bp
ATGGGGTTGCTGGGTGGGCAGCAAAACGGGAATGCAGCTGAGAATGGGGTTGCTGGGTGCGAATTTCAACTCGGAGGGAGCAAGACCAAGTACAAGAGAATGGAGTCCGAGGTCGGAGAGACAGAGGAAGATGCTCCATTGACCGACAAAAATACCGAGAGATATGTCTTCGCCTGCGCAATCTTTGCCTCCCTCAATTCCGTGCTTCTTGGATACGATGTGGGTGTAATGAGTGGAGCAATTATATTCATCCAAGAGGATCTGAAAATCACCAACGTACAACTAGAACTTCTTGTTGGAATTTTGAGTATCATCTCCCTATTGGGAAGCTTAGCCGGTGGAAAAACATCCGATGTCATTGGTAGAAAGTGGACAATTGCATTGGCATCAATTGTCTTTCAGACTGGTGCTCTTATAATGGCACTTGCTCCTAATTTCACAGTACTGATGATTGGTAGACTCTTTGCTGGGGTGGGGATAGGGTTCGGGGTCATGGTTGCGCCTGTTTACATTGCTGAGATTTCTTCTGCAACAGCACGAGGCTCTCTTACATCTTTTCCTGAGATATTTATAAATTTTGGGATCCTGCTTGGATATATATCAAATTATGTTTTTTCAGGACTTCCGGTACATATAAGCTGGAGGGTCATGCTTGGTGTGGGGATCATACCTTCGGTCTTTCTTGGATTTGCTCTTTTTGTGATCCCGGAGTCCCCAAGGTGGTTGGTGACACAGAATAGGATGGAAGAAGCAAGGATGGTATTGACCAGGACTAATGAGAGTGAAAAAGATGTTGAGGATAGATTGGCAGAAATACAGCAAGCCGCAGGGATGGCCAATGCTGAAAACTATGAAGCAAAAGCTATATGGCGCGAAATTTTTATTCCTAATCCTGCAGTTCGACGAATGCTGATTACTGGTTGTGGAATCCAATGTTTCCAACAGATTACTGGTATTGATGCACTTGTGTATTATAGTCCTACGATTTTCAAAGATGCTGGGATTAAAGGCAACACTGAAGTTCTTGCTGCAACTGTTGTTGTTGGTTTTACCAAAACTGTGTTCATTTTGGTAGCTATCTTTCTGATTGACAGAGTGGGGAGAAAGCCTTTGCTTTATGTGGGCACTATAGGAATGACCTCTTGTTTATTTCTTCTGAGCATTGCTCTAGCATTGCCAGGACAGGGGAAACTGGGGATTGGAGCGGCAATATTAGCTGTTTGTGGGAATGTAGCTTTCTTCTCAGTAGGAATTGGCCCAATTTGTTGGGTATTGTCATCGGAAGTCTTCCCTCTAAAGCTTCGAGCTCAAGCATCCGCCCTTGGGGCCGTTGGTAGTAGGGTTAGTAGTGGTGTGATTACCATGTCATTCCTCTCCGTGTCTGGAGCAATAACAGTGGCAGGAACCTTCTTTATTTTTTCAATGATTTCAGCTCTCTCTGTTGCTTTTGTCCACACATGTGTTCCAGAAACAAAAGGAAAGACTTTGGAAGAAATTGAAAAGCTTTTCCAAGACGAAGGAGAATGGCAAGGCGGTGGTGAGGTTGAAATGGGAGATGCAGAACGTCTAGTGCAGAACAAGCTTCCAATAGTAGAGCCTGCAACAAGTCTGGAGCCATAA

Protein Analysis

540

Amino Acids

57.51

Weight (kDa)

5.11

Isoelectric Point (pI)

29.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 59 - 503 8.8e-112 Sugar (and other) transporter
MFS_1 PF07690 65 - 452 8.6e-34 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 416, 572
Acc16I TGCGCA 1 cut(s) 178
AccBSI CCGCTC 1 cut(s) 1205
AccI GTMKAC 1 cut(s) 457
AccII CGCG 1 cut(s) 873
AciI CCGC 4 cut(s) 825, 1205, 1317, 1533
AclWI GGATC 5 cut(s) 267, 577, 590, 671, 697
AcoI YGGCCR 1 cut(s) 834
AcsI RAATTY 4 cut(s) 62, 300, 574, 876
AcuI CTGAAG 1 cut(s) 1038
AfaI GTAC 4 cut(s) 92, 279, 444, 630
AfiI CCNNNNNNNGG 3 cut(s) 720, 1184, 1323
AflIII ACRYGT 1 cut(s) 1457
AgsI TTSAA 5 cut(s) 68, 991, 1422, 1499, 1547
AjnI CCWGG 2 cut(s) 767, 1177
AjuI GAANNNNNNNTTGG 4 cut(s) 279, 311, 1046, 1078
AleI CACNNNNGTG 1 cut(s) 1458
Alw21I GWGCWC 2 cut(s) 412, 1309
Alw26I GTCTC 1 cut(s) 113
AlwI GGATC 5 cut(s) 267, 577, 590, 671, 697
AoxI GGCC 3 cut(s) 834, 1255, 1326
ApeKI GCWGC 3 cut(s) 19, 35, 1028
ApoI RAATTY 4 cut(s) 62, 300, 574, 876
AspLEI GCGC 3 cut(s) 179, 502, 873
AspS9I GGNCC 2 cut(s) 1256, 1326
AsuC2I CCSGG 1 cut(s) 707
AsuHPI GGTGA 3 cut(s) 262, 739, 1550
BaeGI GKGCMC 1 cut(s) 1127
BalI TGGCCA 1 cut(s) 836
BamHI GGATCC 1 cut(s) 582
BanII GRGCYC 1 cut(s) 1309
BauI CACGAG 1 cut(s) 537
BbsI GAAGAC 2 cut(s) 160, 1279
Bbv12I GWGCWC 2 cut(s) 412, 1309
BbvI GCAGC 3 cut(s) 31, 47, 1015
BccI CCATC 3 cut(s) 736, 751, 826
BceAI ACGGC 1 cut(s) 1313
BciT130I CCWGG 2 cut(s) 769, 1179
BciVI GTATCC 1 cut(s) 206
BcnI CCSGG 1 cut(s) 707
BcoDI GTCTC 1 cut(s) 113
BfaI CTAG 3 cut(s) 284, 1169, 1568
BfmI CTRYAG 2 cut(s) 894, 1128
BfuI GTATCC 1 cut(s) 206
BglI GCCNNNNNGGC 1 cut(s) 1325
BisI GCNGC 5 cut(s) 20, 36, 825, 1029, 1206
BlpI GCTNAGC 1 cut(s) 331
BlsI GCNGC 5 cut(s) 21, 37, 826, 1030, 1207
BmcAI AGTACT 1 cut(s) 444
Bme1390I CCNGG 3 cut(s) 707, 769, 1179
BmgT120I GGNCC 2 cut(s) 1256, 1326
BmiI GGNNCC 4 cut(s) 584, 1327, 1405, 1614
BmrFI CCNGG 3 cut(s) 707, 769, 1179
BmrI ACTGGG 1 cut(s) 1202
BmsI GCATC 6 cut(s) 121, 395, 949, 985, 1322, 1546
BmuI ACTGGG 1 cut(s) 1202
BpiI GAAGAC 2 cut(s) 160, 1279
BplI GAGNNNNNCTC 2 cut(s) 1150, 1182
BpmI CTGGAG 2 cut(s) 661, 1404
Bpu1102I GCTNAGC 1 cut(s) 331
BpuEI CTTGAG 1 cut(s) 1293
BpuMI CCSGG 1 cut(s) 707
BsaBI GATNNNNATC 1 cut(s) 598
BsaJI CCNNGG 3 cut(s) 108, 716, 1321
BsaWI WCCGGW 1 cut(s) 625
Bsc4I CCNNNNNNNGG 3 cut(s) 720, 1184, 1323
Bse118I RCCGGY 1 cut(s) 335
Bse1I ACTGG 4 cut(s) 409, 922, 955, 1197
Bse3DI GCAATG 3 cut(s) 510, 1161, 1172
Bse8I GATNNNNATC 1 cut(s) 598
BseBI CCWGG 2 cut(s) 769, 1179
BseDI CCNNGG 3 cut(s) 108, 716, 1321
BseGI GGATG 6 cut(s) 249, 347, 747, 762, 837, 1313
BseJI GATNNNNATC 1 cut(s) 598
BseLI CCNNNNNNNGG 3 cut(s) 720, 1184, 1323
BseMI GCAATG 3 cut(s) 510, 1161, 1172
BseMII CTCAG 5 cut(s) 30, 507, 552, 1148, 1257
BseNI ACTGG 4 cut(s) 409, 922, 955, 1197
BseSI GKGCMC 1 cut(s) 1127
BseXI GCAGC 3 cut(s) 31, 47, 1015
BseYI CCCAGC 4 cut(s) 10, 53, 467, 998
BsgI GTGCAG 1 cut(s) 1592
Bsh1236I CGCG 1 cut(s) 873
BshFI GGCC 3 cut(s) 836, 1257, 1328
BsiHKAI GWGCWC 2 cut(s) 412, 1309
BsiSI CCGG 3 cut(s) 336, 626, 707
BslFI GGGAC 1 cut(s) 697
BslI CCNNNNNNNGG 3 cut(s) 720, 1184, 1323
BsmAI GTCTC 1 cut(s) 113
BsmFI GGGAC 1 cut(s) 697
BsmI GAATGC 2 cut(s) 37, 912
BsnI GGCC 3 cut(s) 836, 1257, 1328
Bsp1286I GDGCHC 3 cut(s) 412, 1127, 1309
Bsp143I GATC 4 cut(s) 259, 582, 663, 702
Bsp1720I GCTNAGC 1 cut(s) 331
BspACI CCGC 4 cut(s) 825, 1205, 1317, 1533
BspANI GGCC 3 cut(s) 836, 1257, 1328
BspCNI CTCAG 5 cut(s) 31, 508, 553, 1149, 1256
BspFNI CGCG 1 cut(s) 873
BspLI GGNNCC 4 cut(s) 584, 1327, 1405, 1614
BspMAI CTGCAG 1 cut(s) 898
BspPI GGATC 5 cut(s) 267, 577, 590, 671, 697
BsrBI CCGCTC 1 cut(s) 1205
BsrDI GCAATG 3 cut(s) 510, 1161, 1172
BsrFI RCCGGY 1 cut(s) 335
BsrI ACTGG 4 cut(s) 409, 922, 955, 1197
BssAI RCCGGY 1 cut(s) 335
BssECI CCNNGG 3 cut(s) 108, 716, 1321
BssMI GATC 4 cut(s) 259, 582, 663, 702
BssSI CACGAG 1 cut(s) 537
BssT1I CCWWGG 2 cut(s) 716, 1321
Bst2BI CACGAG 1 cut(s) 537
Bst2UI CCWGG 2 cut(s) 769, 1179
Bst4CI ACNGT 4 cut(s) 442, 1036, 1060, 1396
BstAPI GCANNNNNTGC 1 cut(s) 185
BstC8I GCNNGC 3 cut(s) 175, 822, 1599
BstDEI CTNAG 6 cut(s) 39, 331, 516, 561, 1157, 1243
BstF5I GGATG 6 cut(s) 249, 347, 747, 762, 837, 1313
BstFNI CGCG 1 cut(s) 873
BstHHI GCGC 3 cut(s) 179, 502, 873
BstKTI GATC 4 cut(s) 262, 585, 666, 705
BstMAI GTCTC 1 cut(s) 113
BstMBI GATC 4 cut(s) 259, 582, 663, 702
BstMWI GCNNNNNNNGC 6 cut(s) 16, 185, 833, 1214, 1325, 1579
BstNI CCWGG 2 cut(s) 769, 1179
BstNSI RCATGY 1 cut(s) 1461
BstSCI CCNGG 3 cut(s) 705, 767, 1177
BstSFI CTRYAG 2 cut(s) 894, 1128
BstSLI GKGCMC 1 cut(s) 1127
BstUI CGCG 1 cut(s) 873
BstV1I GCAGC 3 cut(s) 31, 47, 1015
BstV2I GAAGAC 2 cut(s) 160, 1279
BstX2I RGATCY 2 cut(s) 259, 582
BstXI CCANNNNNNTGG 1 cut(s) 1266
BstYI RGATCY 2 cut(s) 259, 582
BsuI GTATCC 1 cut(s) 206
BsuRI GGCC 3 cut(s) 836, 1257, 1328
BtsCI GGATG 6 cut(s) 249, 347, 747, 762, 837, 1313
BtsIMutI CAGTG 2 cut(s) 1014, 1401
Cac8I GCNNGC 3 cut(s) 175, 822, 1599
CfoI GCGC 3 cut(s) 179, 502, 873
Cfr10I RCCGGY 1 cut(s) 335
Cfr13I GGNCC 2 cut(s) 1256, 1326
Csp6I GTAC 4 cut(s) 91, 278, 443, 629
CspCI CAANNNNNGTGG 2 cut(s) 1377, 1412
CviAII CATG 4 cut(s) 493, 649, 1363, 1458
CviQI GTAC 4 cut(s) 91, 278, 443, 629
DdeI CTNAG 6 cut(s) 39, 331, 516, 561, 1157, 1243
DpnI GATC 4 cut(s) 261, 584, 665, 704
DpnII GATC 4 cut(s) 259, 582, 663, 702
EaeI YGGCCR 1 cut(s) 834
EciI GGCGGA 1 cut(s) 1306
Ecl136II GAGCTC 1 cut(s) 1307
Eco130I CCWWGG 2 cut(s) 716, 1321
Eco24I GRGCYC 1 cut(s) 1309
Eco53kI GAGCTC 1 cut(s) 1307
Eco57I CTGAAG 1 cut(s) 1038
EcoICRI GAGCTC 1 cut(s) 1307
EcoRII CCWGG 2 cut(s) 767, 1177
EcoT14I CCWWGG 2 cut(s) 716, 1321
EcoT38I GRGCYC 1 cut(s) 1309
ErhI CCWWGG 2 cut(s) 716, 1321
FaeI CATG 4 cut(s) 496, 652, 1366, 1461
FaqI GGGAC 1 cut(s) 697
FatI CATG 4 cut(s) 492, 648, 1362, 1457
FblI GTMKAC 1 cut(s) 457
Fnu4HI GCNGC 5 cut(s) 20, 36, 825, 1029, 1206
FokI GGATG 6 cut(s) 236, 334, 754, 769, 844, 1300
FriOI GRGCYC 1 cut(s) 1309
Fsp4HI GCNGC 5 cut(s) 20, 36, 825, 1029, 1206
FspBI CTAG 3 cut(s) 284, 1169, 1568
FspI TGCGCA 1 cut(s) 178
GlaI GCGC 3 cut(s) 178, 501, 872
GluI GCNGC 5 cut(s) 20, 36, 825, 1029, 1206
GsaI CCCAGC 4 cut(s) 14, 57, 471, 1002
GsuI CTGGAG 2 cut(s) 661, 1404
HaeIII GGCC 3 cut(s) 836, 1257, 1328
HapII CCGG 3 cut(s) 336, 626, 707
HhaI GCGC 3 cut(s) 179, 502, 873
Hin1II CATG 4 cut(s) 496, 652, 1366, 1461
Hin6I GCGC 3 cut(s) 177, 500, 871
HinP1I GCGC 3 cut(s) 177, 500, 871
HindIII AAGCTT 4 cut(s) 328, 1298, 1502, 1580
HinfI GANTC 4 cut(s) 104, 459, 710, 927
HpaII CCGG 3 cut(s) 336, 626, 707
HphI GGTGA 3 cut(s) 262, 739, 1550
Hpy166II GTNNAC 4 cut(s) 372, 458, 508, 1453
Hpy188I TCNGA 9 cut(s) 74, 109, 116, 264, 352, 402, 1086, 1158, 1282
Hpy188III TCNNGA 5 cut(s) 560, 618, 1383, 1466, 1610
Hpy8I GTNNAC 4 cut(s) 372, 458, 508, 1453
Hpy99I CGWCG 1 cut(s) 906
HpyAV CCTTC 3 cut(s) 681, 1417, 1511
HpyCH4III ACNGT 4 cut(s) 442, 1036, 1060, 1396
HpyCH4IV ACGT 2 cut(s) 276, 1564
HpyCH4V TGCA 9 cut(s) 35, 380, 530, 896, 962, 1031, 1559, 1573, 1601
HpyF10VI GCNNNNNNNGC 6 cut(s) 16, 185, 833, 1214, 1325, 1579
HpyF3I CTNAG 6 cut(s) 39, 331, 516, 561, 1157, 1243
HpySE526I ACGT 2 cut(s) 276, 1564
Hsp92II CATG 4 cut(s) 496, 652, 1366, 1461
HspAI GCGC 3 cut(s) 177, 500, 871
Kzo9I GATC 4 cut(s) 259, 582, 663, 702
LmnI GCTCC 7 cut(s) 78, 139, 236, 433, 1202, 1385, 1612
Lsp1109I GCAGC 3 cut(s) 31, 47, 1015
LweI GCATC 6 cut(s) 121, 395, 949, 985, 1322, 1546
MaeI CTAG 3 cut(s) 284, 1169, 1568
MaeII ACGT 2 cut(s) 276, 1564
MaeIII GTNAC 1 cut(s) 727
MalI GATC 4 cut(s) 261, 584, 665, 704
MbiI CCGCTC 1 cut(s) 1205
MboI GATC 4 cut(s) 259, 582, 663, 702
MboII GAAGA 8 cut(s) 140, 160, 516, 758, 1145, 1231, 1279, 1502
MfeI CAATTG 2 cut(s) 375, 390
MflI RGATCY 2 cut(s) 259, 582
MhlI GDGCHC 3 cut(s) 412, 1127, 1309
MlsI TGGCCA 1 cut(s) 836
MluNI TGGCCA 1 cut(s) 836
MlyI GAGTC 3 cut(s) 113, 453, 719
MmeI TCCRAC 3 cut(s) 94, 277, 964
Mox20I TGGCCA 1 cut(s) 836
MscI TGGCCA 1 cut(s) 836
MseI TTAA 1 cut(s) 1005
MslI CAYNNNNRTG 1 cut(s) 1458
Msp20I TGGCCA 1 cut(s) 836
MspA1I CMGCKG 1 cut(s) 38
MspI CCGG 3 cut(s) 336, 626, 707
MspR9I CCNGG 3 cut(s) 707, 769, 1179
MunI CAATTG 2 cut(s) 375, 390
Mva1269I GAATGC 2 cut(s) 37, 912
MvaI CCWGG 2 cut(s) 769, 1179
MvnI CGCG 1 cut(s) 873
MwoI GCNNNNNNNGC 6 cut(s) 16, 185, 833, 1214, 1325, 1579
NciI CCSGG 1 cut(s) 707
NdeII GATC 4 cut(s) 259, 582, 663, 702
NlaIII CATG 4 cut(s) 496, 652, 1366, 1461
NlaIV GGNNCC 4 cut(s) 584, 1327, 1405, 1614
NmuCI GTSAC 1 cut(s) 727
NsbI TGCGCA 1 cut(s) 178
NspI RCATGY 1 cut(s) 1461
OliI CACNNNNGTG 1 cut(s) 1458
PciI ACATGT 1 cut(s) 1457
PctI GAATGC 2 cut(s) 37, 912
PfeI GAWTC 1 cut(s) 927
PfoI TCCNGGA 1 cut(s) 705
PkrI GCNGC 5 cut(s) 21, 37, 826, 1030, 1207
PleI GAGTC 3 cut(s) 112, 453, 718
PpsI GAGTC 3 cut(s) 112, 453, 718
PscI ACATGT 1 cut(s) 1457
PsiI TTATAA 2 cut(s) 416, 572
Psp124BI GAGCTC 1 cut(s) 1309
Psp6I CCWGG 2 cut(s) 767, 1177
PspFI CCCAGC 4 cut(s) 10, 53, 467, 998
PspGI CCWGG 2 cut(s) 767, 1177
PspN4I GGNNCC 4 cut(s) 584, 1327, 1405, 1614
PspPI GGNCC 2 cut(s) 1256, 1326
PstI CTGCAG 1 cut(s) 898
PsuI RGATCY 2 cut(s) 259, 582
PvuII CAGCTG 1 cut(s) 38
RsaI GTAC 4 cut(s) 92, 279, 444, 630
RsaNI GTAC 4 cut(s) 91, 278, 443, 629
RseI CAYNNNNRTG 1 cut(s) 1458
SacI GAGCTC 1 cut(s) 1309
SaqAI TTAA 1 cut(s) 1005
SatI GCNGC 5 cut(s) 20, 36, 825, 1029, 1206
Sau3AI GATC 4 cut(s) 259, 582, 663, 702
Sau96I GGNCC 2 cut(s) 1256, 1326
ScaI AGTACT 1 cut(s) 444
SchI GAGTC 3 cut(s) 113, 453, 719
ScrFI CCNGG 3 cut(s) 707, 769, 1179
SduI GDGCHC 3 cut(s) 412, 1127, 1309
SfaNI GCATC 6 cut(s) 121, 395, 949, 985, 1322, 1546
SfcI CTRYAG 2 cut(s) 894, 1128
SmiMI CAYNNNNRTG 1 cut(s) 1458
SmlI CTYRAG 1 cut(s) 1308
SmoI CTYRAG 1 cut(s) 1308
SsiI CCGC 4 cut(s) 825, 1205, 1317, 1533
SspI AATATT 1 cut(s) 1212
SspMI CTAG 3 cut(s) 284, 1169, 1568
SstI GAGCTC 1 cut(s) 1309
StyD4I CCNGG 3 cut(s) 705, 767, 1177
StyI CCWWGG 2 cut(s) 716, 1321
TaaI ACNGT 4 cut(s) 442, 1036, 1060, 1396
TaiI ACGT 2 cut(s) 279, 1567
TaqI TCGA 2 cut(s) 901, 1303
TaqII GACCGA 2 cut(s) 158, 664
TatI WGTACW 2 cut(s) 90, 442
TauI GCSGC 2 cut(s) 827, 1208
TfiI GAWTC 1 cut(s) 927
Tru1I TTAA 1 cut(s) 1005
Tru9I TTAA 1 cut(s) 1005
TscAI CASTG 2 cut(s) 1021, 1401
TseFI GTSAC 1 cut(s) 727
TseI GCWGC 3 cut(s) 19, 35, 1028
Tsp45I GTSAC 1 cut(s) 727
TspDTI ATGAA 3 cut(s) 238, 867, 1054
TspGWI ACGGA 2 cut(s) 190, 1366
TspRI CASTG 2 cut(s) 1021, 1401
XapI RAATTY 4 cut(s) 62, 300, 574, 876
XceI RCATGY 1 cut(s) 1461
XcmI CCANNNNNNNNNTGG 1 cut(s) 947
XmiI GTMKAC 1 cut(s) 457
XspI CTAG 3 cut(s) 284, 1169, 1568
ZrmI AGTACT 1 cut(s) 444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.