pycom17g24690
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
22910873 .. 22913611
2739 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g24690.1

Sequence Viewer

Length: 1635 bp
ATGGGGTTGGTGGGTGTTCCAGAAATTGGAAATGGAGAAATGGGTATGTCTGGGATTCCATTGGGAACCAAGAACAAGTACAAGAGGATGGATTCTGAGCCCGAGGTCGAGCTCACAGAGGAATACGAGGATGGTGCTTCTCGACACCACCTTCAACAAATCAGGAGCAAAAAAACCAGGAAATATGTCCTCGCCTGCGCCATTTTTGCCTCTCTCAACTCTGTTCTTCTTGGCTATGATGTAGGTGTCATGAGTGGAGCTATCATATTCATTCAGGAAGATTTAAAGATTACCGAGGTGCAAGAAGAAGTTCTTGTTGGGATTTTGAGCATTGTTTCGCTTTTTGGTAGTTTAGCTGGTGGTAAAACATCAGATATCATTGGTAGGAAGTGGACCATGGCCTTGGCTGCTGTTGTCTTTCAAGCAGGTGCAGCTACAATGACCCTTGCTCCTTCATTTGAAATATTGATGATTGGAAGACTCTTTGCGGGCGTTGGAATTGGCTTTGGTGTCATGATTGCTCCTGTTTATATCGCTGAGATATCACCCACCATTGACAGAGGCTCACTCACCTCATTCCCAGAAATATTTATAAATCTGGGAATTTTACTCGGCTACGTCTCAAACTATGCATTTTCCGGGCTTCCGGCACATATAAACTGGAGGATAATGCTTGCAGTAGGAATTACGCCTTCAATTTTCATTGGTTTTGCACTTTTCGTAATCCCCGAGTCTCCAAGGTGGTTGGTCCTTCAGAACCGTATTGATGAGGCAAGATCAGTGTTGATGAAAACAAATGAGAATGAAAGTGAGGTGGAGGACAGACTGAATGAAATACTAGCAGCGGCTGACAATTCTAGTGCGGGGAAGTATGAGGAGAAAAGTGTGACGAGTGAACTAATGAGTCCATCTCCTTCACTTCGTCGGATGCTTATCACAGGTTTTGGAATTCAATGTTTTCAACAGATAACAGGAATAGATGCGACTGTGTACTACAGCCCCGAAATCTTCCAAGAAGCAGGAATAAAAAATAAACAAAATATACTTGCTGCAACTGTTGCGGTGGGTGTCACAAAGACTGTTTTTATAATGGTCGCTATTCTTCTTATAGACAAGCTCGGAAGAAAGCCCTTGCTCTATGTCAGCACGATTGGAATGACGATTTGTTTATTCAGTTTAGGATTTACTCTCTCTGTTCTTGGGAAAGGACAGTTTGGCGTTGCAATGGCAATTTTATCTGTTTGCGGAAATGTAGCCTTCTTCTCTGTTGGAATTGGACCTGTTTGCTGGGTTTTGACATCCGAAATCTTCCCTCTAAGGGTGCGTGCGCAAGCAGCAGCGCTTGGAGCAGTGGGTAATAGGGTGTGCAGTGGCCTAGTTGCCATGTCTTTTCTCTCAGTTTCCAATGCAATTTCATTTGGTGGAACATTCTTTATCTTTTCTGCAGTCGCTGCTCTTTCTGTCGTATTTGTCTACACCTGTGTTCCAGAAACCAAAGGAAAGTCATTGGAGCAGATTGAGTTGCTTTTTCAAACTGAACATGATCAGAAAGGAGGTCAAGTGGAACTAGGAGATGTCGAGCACCTTGTGCAGAAAGGAAAACTAATTGATCGATCGGGAAAGCTCATTCGATGA

Protein Analysis

545

Amino Acids

58.58

Weight (kDa)

5.9

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 66 - 510 1.2e-110 Sugar (and other) transporter
MFS_1 PF07690 72 - 458 3.5e-30 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 593, 1088
AarI CACCTGC 1 cut(s) 416
Acc16I TGCGCA 1 cut(s) 1329
Acc36I ACCTGC 1 cut(s) 416
AccB7I CCANNNNNTGG 1 cut(s) 26
AccI GTMKAC 1 cut(s) 1473
AciI CCGC 5 cut(s) 488, 845, 863, 1061, 1245
AcsI RAATTY 2 cut(s) 603, 948
AcuI CTGAAG 1 cut(s) 737
AdeI CACNNNGTG 1 cut(s) 1588
AfaI GTAC 2 cut(s) 80, 992
AfeI AGCGCT 1 cut(s) 1341
AfiI CCNNNNNNNGG 2 cut(s) 26, 1318
AgsI TTSAA 7 cut(s) 155, 422, 461, 696, 953, 962, 1532
AjnI CCWGG 1 cut(s) 176
AjuI GAANNNNNNNTTGG 2 cut(s) 300, 332
AluBI AGCT 6 cut(s) 112, 260, 356, 434, 1117, 1624
AluI AGCT 6 cut(s) 112, 260, 356, 434, 1117, 1624
Alw21I GWGCWC 2 cut(s) 114, 1584
Alw26I GTCTC 2 cut(s) 625, 738
AlwNI CAGNNNCTG 2 cut(s) 848, 1451
Ama87I CYCGRG 2 cut(s) 101, 728
Aor51HI AGCGCT 1 cut(s) 1341
AoxI GGCC 2 cut(s) 399, 1372
ApeKI GCWGC 7 cut(s) 407, 431, 842, 1049, 1334, 1337, 1451
ApoI RAATTY 2 cut(s) 603, 948
Asp700I GAANNNNTTC 1 cut(s) 309
AspLEI GCGC 3 cut(s) 200, 1330, 1342
AspS9I GGNCC 3 cut(s) 393, 748, 1277
AsuC2I CCSGG 1 cut(s) 640
AsuHPI GGTGA 2 cut(s) 537, 562
AvaI CYCGRG 2 cut(s) 101, 728
AvaII GGWCC 3 cut(s) 393, 748, 1277
BanII GRGCYC 2 cut(s) 102, 114
BbsI GAAGAC 1 cut(s) 484
Bbv12I GWGCWC 2 cut(s) 114, 1584
BbvI GCAGC 7 cut(s) 394, 443, 854, 1036, 1346, 1349, 1438
BccI CCATC 3 cut(s) 82, 125, 916
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 1 cut(s) 178
BclI TGATCA 1 cut(s) 1543
BcnI CCSGG 1 cut(s) 640
BcoDI GTCTC 2 cut(s) 625, 738
BfaI CTAG 4 cut(s) 839, 858, 1376, 1568
BfmI CTRYAG 2 cut(s) 994, 1443
BfoI RGCGCY 1 cut(s) 1343
BfuAI ACCTGC 1 cut(s) 416
BisI GCNGC 8 cut(s) 408, 432, 843, 846, 1050, 1335, 1338, 1452
BlsI GCNGC 8 cut(s) 409, 433, 844, 847, 1051, 1336, 1339, 1453
Bme1390I CCNGG 2 cut(s) 178, 640
Bme18I GGWCC 3 cut(s) 393, 748, 1277
BmeT110I CYCGRG 2 cut(s) 101, 728
BmgT120I GGNCC 3 cut(s) 393, 748, 1277
BmiI GGNNCC 1 cut(s) 67
BmrFI CCNGG 2 cut(s) 178, 640
BmsI GCATC 2 cut(s) 918, 970
BpiI GAAGAC 1 cut(s) 484
BplI GAGNNNNNCTC 4 cut(s) 552, 584, 895, 927
BpmI CTGGAG 1 cut(s) 682
BpuMI CCSGG 1 cut(s) 640
Bsa29I ATCGAT 1 cut(s) 1612
BsaBI GATNNNNATC 1 cut(s) 932
BsaJI CCNNGG 5 cut(s) 102, 294, 396, 402, 737
BsaXI ACNNNNNCTCC 4 cut(s) 433, 463, 1545, 1575
Bsc4I CCNNNNNNNGG 2 cut(s) 26, 1318
Bse1I ACTGG 1 cut(s) 665
Bse3DI GCAATG 1 cut(s) 1230
Bse8I GATNNNNATC 1 cut(s) 932
BseBI CCWGG 1 cut(s) 178
BseCI ATCGAT 1 cut(s) 1612
BseDI CCNNGG 5 cut(s) 102, 294, 396, 402, 737
BseGI GGATG 4 cut(s) 93, 136, 933, 1298
BseJI GATNNNNATC 1 cut(s) 932
BseLI CCNNNNNNNGG 2 cut(s) 26, 1318
BseMI GCAATG 1 cut(s) 1230
BseMII CTCAG 3 cut(s) 87, 528, 1410
BseNI ACTGG 1 cut(s) 665
BseRI GAGGAG 1 cut(s) 890
BseXI GCAGC 7 cut(s) 394, 443, 854, 1036, 1346, 1349, 1438
BseYI CCCAGC 1 cut(s) 1287
BsgI GTGCAG 3 cut(s) 450, 1387, 1610
Bsh1285I CGRYCG 1 cut(s) 1616
BshFI GGCC 2 cut(s) 401, 1374
BshVI ATCGAT 1 cut(s) 1612
BsiEI CGRYCG 1 cut(s) 1616
BsiHKAI GWGCWC 2 cut(s) 114, 1584
BsiHKCI CYCGRG 2 cut(s) 101, 728
BsiSI CCGG 2 cut(s) 639, 647
BslI CCNNNNNNNGG 2 cut(s) 26, 1318
BsmAI GTCTC 2 cut(s) 625, 738
BsmBI CGTCTC 1 cut(s) 625
BsnI GGCC 2 cut(s) 401, 1374
BsoBI CYCGRG 2 cut(s) 101, 728
Bsp1286I GDGCHC 3 cut(s) 102, 114, 1584
Bsp143I GATC 4 cut(s) 776, 1543, 1609, 1613
Bsp19I CCATGG 1 cut(s) 396
BspACI CCGC 5 cut(s) 488, 845, 863, 1061, 1245
BspANI GGCC 2 cut(s) 401, 1374
BspCNI CTCAG 3 cut(s) 88, 529, 1409
BspDI ATCGAT 1 cut(s) 1612
BspHI TCATGA 2 cut(s) 249, 513
BspLI GGNNCC 1 cut(s) 67
BspMAI CTGCAG 1 cut(s) 1447
BspMI ACCTGC 1 cut(s) 416
BsrDI GCAATG 1 cut(s) 1230
BsrI ACTGG 1 cut(s) 665
BssECI CCNNGG 5 cut(s) 102, 294, 396, 402, 737
BssMI GATC 4 cut(s) 776, 1543, 1609, 1613
BssT1I CCWWGG 3 cut(s) 396, 402, 737
Bst2UI CCWGG 1 cut(s) 178
Bst4CI ACNGT 5 cut(s) 761, 988, 1057, 1081, 1212
BstAPI GCANNNNNTGC 3 cut(s) 1058, 1451, 1588
BstC8I GCNNGC 5 cut(s) 196, 490, 675, 1326, 1332
BstDEI CTNAG 4 cut(s) 96, 537, 1316, 1396
BstDSI CCRYGG 1 cut(s) 396
BstF5I GGATG 4 cut(s) 93, 136, 933, 1298
BstH2I RGCGCY 1 cut(s) 1343
BstHHI GCGC 3 cut(s) 200, 1330, 1342
BstKTI GATC 4 cut(s) 779, 1546, 1612, 1616
BstMAI GTCTC 2 cut(s) 625, 738
BstMBI GATC 4 cut(s) 776, 1543, 1609, 1613
BstMCI CGRYCG 1 cut(s) 1616
BstMWI GCNNNNNNNGC 8 cut(s) 206, 407, 431, 1058, 1334, 1346, 1451, 1588
BstNI CCWGG 1 cut(s) 178
BstSCI CCNGG 2 cut(s) 176, 638
BstSFI CTRYAG 2 cut(s) 994, 1443
BstV1I GCAGC 7 cut(s) 394, 443, 854, 1036, 1346, 1349, 1438
BstV2I GAAGAC 1 cut(s) 484
BstXI CCANNNNNNTGG 1 cut(s) 403
Bsu15I ATCGAT 1 cut(s) 1612
BsuRI GGCC 2 cut(s) 401, 1374
BsuTUI ATCGAT 1 cut(s) 1612
BtgI CCRYGG 1 cut(s) 396
BtsCI GGATG 4 cut(s) 93, 136, 933, 1298
BtsI GCAGTG 2 cut(s) 1356, 1375
BtsIMutI CAGTG 3 cut(s) 786, 1356, 1375
BveI ACCTGC 1 cut(s) 416
Cac8I GCNNGC 5 cut(s) 196, 490, 675, 1326, 1332
CaiI CAGNNNCTG 2 cut(s) 848, 1451
CciI TCATGA 2 cut(s) 249, 513
CfoI GCGC 3 cut(s) 200, 1330, 1342
Cfr13I GGNCC 3 cut(s) 393, 748, 1277
ClaI ATCGAT 1 cut(s) 1612
Csp6I GTAC 2 cut(s) 79, 991
CviAII CATG 5 cut(s) 250, 397, 514, 1384, 1541
CviQI GTAC 2 cut(s) 79, 991
DdeI CTNAG 4 cut(s) 96, 537, 1316, 1396
DpnI GATC 4 cut(s) 778, 1545, 1611, 1615
DpnII GATC 4 cut(s) 776, 1543, 1609, 1613
DraI TTTAAA 1 cut(s) 285
DraIII CACNNNGTG 1 cut(s) 1588
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 3 cut(s) 396, 402, 737
Eco24I GRGCYC 2 cut(s) 102, 114
Eco32I GATATC 2 cut(s) 376, 543
Eco47I GGWCC 3 cut(s) 393, 748, 1277
Eco47III AGCGCT 1 cut(s) 1341
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 737
Eco88I CYCGRG 2 cut(s) 101, 728
EcoICRI GAGCTC 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 948
EcoRII CCWGG 1 cut(s) 176
EcoRV GATATC 2 cut(s) 376, 543
EcoT14I CCWWGG 3 cut(s) 396, 402, 737
EcoT22I ATGCAT 1 cut(s) 634
EcoT38I GRGCYC 2 cut(s) 102, 114
ErhI CCWWGG 3 cut(s) 396, 402, 737
Esp3I CGTCTC 1 cut(s) 625
FaeI CATG 5 cut(s) 253, 400, 517, 1387, 1544
FalI AAGNNNNNCTT 2 cut(s) 297, 329
FatI CATG 5 cut(s) 249, 396, 513, 1383, 1540
FauI CCCGC 2 cut(s) 481, 856
FbaI TGATCA 1 cut(s) 1543
FblI GTMKAC 1 cut(s) 1473
Fnu4HI GCNGC 8 cut(s) 408, 432, 843, 846, 1050, 1335, 1338, 1452
FokI GGATG 4 cut(s) 100, 143, 940, 1285
FriOI GRGCYC 2 cut(s) 102, 114
Fsp4HI GCNGC 8 cut(s) 408, 432, 843, 846, 1050, 1335, 1338, 1452
FspBI CTAG 4 cut(s) 839, 858, 1376, 1568
FspI TGCGCA 1 cut(s) 1329
GlaI GCGC 3 cut(s) 199, 1329, 1341
GluI GCNGC 8 cut(s) 408, 432, 843, 846, 1050, 1335, 1338, 1452
GsaI CCCAGC 1 cut(s) 1291
GsuI CTGGAG 1 cut(s) 682
HaeII RGCGCY 1 cut(s) 1343
HaeIII GGCC 2 cut(s) 401, 1374
HapII CCGG 2 cut(s) 639, 647
HhaI GCGC 3 cut(s) 200, 1330, 1342
Hin1II CATG 5 cut(s) 253, 400, 517, 1387, 1544
Hin6I GCGC 3 cut(s) 198, 1328, 1340
HinP1I GCGC 3 cut(s) 198, 1328, 1340
HinfI GANTC 5 cut(s) 55, 92, 480, 731, 904
HpaII CCGG 2 cut(s) 639, 647
HphI GGTGA 2 cut(s) 537, 562
Hpy166II GTNNAC 4 cut(s) 393, 896, 991, 1474
Hpy188I TCNGA 7 cut(s) 97, 373, 756, 927, 1121, 1303, 1548
Hpy188III TCNNGA 8 cut(s) 20, 141, 163, 250, 275, 514, 1487, 1617
Hpy8I GTNNAC 4 cut(s) 393, 896, 991, 1474
Hpy99I CGWCG 1 cut(s) 927
HpyAV CCTTC 6 cut(s) 161, 462, 702, 761, 924, 1267
HpyCH4III ACNGT 5 cut(s) 761, 988, 1057, 1081, 1212
HpyCH4IV ACGT 1 cut(s) 618
HpyF10VI GCNNNNNNNGC 8 cut(s) 206, 407, 431, 1058, 1334, 1346, 1451, 1588
HpyF3I CTNAG 4 cut(s) 96, 537, 1316, 1396
HpySE526I ACGT 1 cut(s) 618
Hsp92II CATG 5 cut(s) 253, 400, 517, 1387, 1544
HspAI GCGC 3 cut(s) 198, 1328, 1340
Ksp22I TGATCA 1 cut(s) 1543
Kzo9I GATC 4 cut(s) 776, 1543, 1609, 1613
LmnI GCTCC 6 cut(s) 165, 257, 454, 526, 1346, 1510
Lsp1109I GCAGC 7 cut(s) 394, 443, 854, 1036, 1346, 1349, 1438
LweI GCATC 2 cut(s) 918, 970
MaeI CTAG 4 cut(s) 839, 858, 1376, 1568
MaeII ACGT 1 cut(s) 618
MaeIII GTNAC 2 cut(s) 886, 1069
MalI GATC 4 cut(s) 778, 1545, 1611, 1615
MboI GATC 4 cut(s) 776, 1543, 1609, 1613
MboII GAAGA 9 cut(s) 218, 290, 317, 489, 1000, 1094, 1134, 1252, 1300
MhlI GDGCHC 3 cut(s) 102, 114, 1584
MlyI GAGTC 3 cut(s) 474, 740, 913
MmeI TCCRAC 3 cut(s) 475, 905, 1249
Mph1103I ATGCAT 1 cut(s) 634
MroXI GAANNNNTTC 1 cut(s) 309
MseI TTAA 1 cut(s) 284
MspA1I CMGCKG 1 cut(s) 845
MspI CCGG 2 cut(s) 639, 647
MspR9I CCNGG 2 cut(s) 178, 640
MvaI CCWGG 1 cut(s) 178
MwoI GCNNNNNNNGC 8 cut(s) 206, 407, 431, 1058, 1334, 1346, 1451, 1588
NciI CCSGG 1 cut(s) 640
NcoI CCATGG 1 cut(s) 396
NdeII GATC 4 cut(s) 776, 1543, 1609, 1613
NlaIII CATG 5 cut(s) 253, 400, 517, 1387, 1544
NlaIV GGNNCC 1 cut(s) 67
NmeAIII GCCGAG 1 cut(s) 591
NmuCI GTSAC 2 cut(s) 886, 1069
NsbI TGCGCA 1 cut(s) 1329
NsiI ATGCAT 1 cut(s) 634
PagI TCATGA 2 cut(s) 249, 513
PaqCI CACCTGC 1 cut(s) 416
PcsI WCGNNNNNNNCGW 1 cut(s) 726
PdmI GAANNNNTTC 1 cut(s) 309
PfeI GAWTC 2 cut(s) 55, 92
PflMI CCANNNNNTGG 1 cut(s) 26
PkrI GCNGC 8 cut(s) 409, 433, 844, 847, 1051, 1336, 1339, 1453
Ple19I CGATCG 1 cut(s) 1616
PleI GAGTC 3 cut(s) 474, 739, 912
PpsI GAGTC 3 cut(s) 474, 739, 912
PsiI TTATAA 2 cut(s) 593, 1088
Psp124BI GAGCTC 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 176
PspFI CCCAGC 1 cut(s) 1287
PspGI CCWGG 1 cut(s) 176
PspN4I GGNNCC 1 cut(s) 67
PspPI GGNCC 3 cut(s) 393, 748, 1277
PstI CTGCAG 1 cut(s) 1447
PstNI CAGNNNCTG 2 cut(s) 848, 1451
PvuI CGATCG 1 cut(s) 1616
RsaI GTAC 2 cut(s) 80, 992
RsaNI GTAC 2 cut(s) 79, 991
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 1 cut(s) 284
SatI GCNGC 8 cut(s) 408, 432, 843, 846, 1050, 1335, 1338, 1452
Sau3AI GATC 4 cut(s) 776, 1543, 1609, 1613
Sau96I GGNCC 3 cut(s) 393, 748, 1277
SchI GAGTC 3 cut(s) 474, 740, 913
ScrFI CCNGG 2 cut(s) 178, 640
SduI GDGCHC 3 cut(s) 102, 114, 1584
SfaNI GCATC 2 cut(s) 918, 970
SfcI CTRYAG 2 cut(s) 994, 1443
SinI GGWCC 3 cut(s) 393, 748, 1277
SsiI CCGC 5 cut(s) 488, 845, 863, 1061, 1245
SspI AATATT 2 cut(s) 465, 588
SspMI CTAG 4 cut(s) 839, 858, 1376, 1568
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 2 cut(s) 176, 638
StyI CCWWGG 3 cut(s) 396, 402, 737
TaaI ACNGT 5 cut(s) 761, 988, 1057, 1081, 1212
TaiI ACGT 1 cut(s) 621
TaqI TCGA 5 cut(s) 108, 142, 1578, 1612, 1630
TatI WGTACW 2 cut(s) 78, 990
TauI GCSGC 1 cut(s) 848
TfiI GAWTC 2 cut(s) 55, 92
Tru1I TTAA 1 cut(s) 284
Tru9I TTAA 1 cut(s) 284
TscAI CASTG 3 cut(s) 786, 1356, 1375
TseFI GTSAC 2 cut(s) 886, 1069
TseI GCWGC 7 cut(s) 407, 431, 842, 1049, 1334, 1337, 1451
Tsp45I GTSAC 2 cut(s) 886, 1069
TspDTI ATGAA 7 cut(s) 259, 444, 691, 803, 819, 846, 1404
TspRI CASTG 3 cut(s) 786, 1356, 1375
Van91I CCANNNNNTGG 1 cut(s) 26
VpaK11BI GGWCC 3 cut(s) 393, 748, 1277
XapI RAATTY 2 cut(s) 603, 948
XmiI GTMKAC 1 cut(s) 1473
XmnI GAANNNNTTC 1 cut(s) 309
XspI CTAG 4 cut(s) 839, 858, 1376, 1568
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.