pycom09g16810
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
17185533 .. 17187914
2382 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g16810.1

Sequence Viewer

Length: 1632 bp
ATGGGGTTGGTTGGTGTTCCAGAAATTGGAAATGGAGAAATCGGTTTGTCTGGGATTCCATTGGGGACCAAGAACAAGTACAAGAGGATGGATTCTGAGTCCGAGGTCGAGCTCACAGAGGAATACGAGGATGCTGCTTCTCGCCACCATCTTCAACAAATTCGGAGCAAACAAACCAGGAAATATGTCCTCGCTTGCGCCATTTTTGCTTCTCTCAACCATGTTCTTCTTGGCTATGATGTAGGTGTCATGAGTGGAGCTATCATATTCATTCGGGAAGATTTAAAGATAACCGAGGTACAAGAAGAAGTTCTTGTTGGGATTTTGAGCATTGTTTCGCTTTTCGGTAGTTTAGGTGGTGGTAAAACATCAGATATCATTGGTAGGAAGTGGACCATGGCCTTGGCTGCTGTTGTCTTTCAAACAGGTGCAGCTATAATGACCCTTGCACCTTCATTTGAAATATTGATGGTCGGAAGACTCTTGGCGGGCATTGGAATTGGCTTCGGTGGCATGGTTGCCCCTGTTTATATTGCTGAGATATCACCCACTATTGACAGAGGCTCACTGACCTCATTCCCGGAAATATTTATAAATCTGGGAATTTTACTCGGCTACGTCTCAAACTATGCATTTTCTGGTCTCCCAACACATATAAACTGGAGGATAATGCTTGCAGTAGGAATTACGCCTTCAATTTTCATTGGTTTTGCACTTTTCGTGGTCCCTGAGTCTCCAACGTGGTTGGTCCTTCAGAACCGTGTTGATGAGGCAAGATCAGTGTTGATGAAAACAAATGAGAATGAAAGTGAGGTGGAGGACAGACTGAATGAAATATTAGCAGCCGCCGACAATTCCAGTGCGGAGAAGTATGAGGAGAAAAGTGTGACGAGCGAACTAATGAGTCCATCTCCTTCACTTCGTTGGATGCTTATCACAGGTTTTGGAATTCAATGTTTTCAACAGATAACAGGAATAGATGCGACAGTGTATTACAGCCCTGAAATCTTCCAAGAAGCAGGAGTTAAAGATAAACAAAATGTACTTGCTGCAACTGTTGCGGTGGGTGTTACAAAGACTGTTTTTATAATGGTCGCTATTCTCCTTATAGACAAGCTCGGAAGAAAGCCCTTGCTCTATATAAGCACTATTGGAATGACGATTTGTTTGTTCAGTTTAGCATTTACTCTATCTGTTCTTGGGAAAGGACAGTTTGGTGTTGTGATGGCAATTCTATTAGTTTGCGGAAACGTAGCTTTCTTCTCTGTTGGAATTGGACCTGTTTGCTGGGTTTTGACATCCGAAATCTTCCCTCTAAGGTTGCGTGCACAAGCAGCAGCACTTGGAGCAGTGGGTAATAGGGTGTGCAGTGGCCTAGTTGCCATGTCTTTTCTCTCAGTTTCCAATGCAATTTCATTTGGTGGAACATTCTTTATCTTTTCTGCATTTTCCTCTCTTTCTGTTGCATTCGTCTACACCTTTGTTCCAGAAACCAAAGGAAAGTCATTGGAGCAGATTGAGTTGCTTTTTCAAACTGAACACGATCGGAAAGGAGGTCAAGTGGAACTAGGAGATGTCGAGCACCTTGTGCAGAAAGTCGTCGATGATCGATCGGGAAAGCTCATTCGATGA

Protein Analysis

544

Amino Acids

58.7

Weight (kDa)

5.4

Isoelectric Point (pI)

40.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 67 - 510 7.6e-110 Sugar (and other) transporter
MFS_1 PF07690 72 - 458 6.1e-32 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 593, 1088
AccB7I CCANNNNNTGG 1 cut(s) 26
AccI GTMKAC 1 cut(s) 1473
AciI CCGC 5 cut(s) 488, 846, 863, 1061, 1245
AcsI RAATTY 3 cut(s) 159, 603, 948
AcuI CTGAAG 1 cut(s) 737
AdeI CACNNNGTG 1 cut(s) 1588
AfaI GTAC 3 cut(s) 80, 300, 1044
AfiI CCNNNNNNNGG 1 cut(s) 26
AgsI TTSAA 7 cut(s) 155, 422, 461, 696, 953, 962, 1532
AjnI CCWGG 1 cut(s) 176
AjuI GAANNNNNNNTTGG 2 cut(s) 300, 332
AluBI AGCT 6 cut(s) 112, 260, 434, 1117, 1256, 1621
AluI AGCT 6 cut(s) 112, 260, 434, 1117, 1256, 1621
Alw21I GWGCWC 3 cut(s) 114, 1330, 1584
Alw26I GTCTC 3 cut(s) 625, 647, 738
Alw44I GTGCAC 1 cut(s) 1326
AoxI GGCC 2 cut(s) 399, 1372
ApaLI GTGCAC 1 cut(s) 1326
ApeKI GCWGC 7 cut(s) 134, 407, 431, 842, 1049, 1334, 1337
ApoI RAATTY 3 cut(s) 159, 603, 948
ArsI GACNNNNNNTTYG 2 cut(s) 1150, 1182
Asp700I GAANNNNTTC 1 cut(s) 309
AspLEI GCGC 1 cut(s) 200
AspS9I GGNCC 5 cut(s) 66, 393, 724, 748, 1277
AsuC2I CCSGG 1 cut(s) 581
AsuHPI GGTGA 1 cut(s) 537
AvaII GGWCC 5 cut(s) 66, 393, 724, 748, 1277
BaeGI GKGCMC 1 cut(s) 1330
BanII GRGCYC 1 cut(s) 114
BbsI GAAGAC 1 cut(s) 484
Bbv12I GWGCWC 3 cut(s) 114, 1330, 1584
BbvI GCAGC 7 cut(s) 121, 394, 443, 854, 1036, 1346, 1349
BccI CCATC 5 cut(s) 82, 156, 463, 916, 1219
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 1 cut(s) 178
BcnI CCSGG 1 cut(s) 581
BcoDI GTCTC 3 cut(s) 625, 647, 738
BfaI CTAG 2 cut(s) 1376, 1568
BisI GCNGC 8 cut(s) 135, 408, 432, 843, 846, 1050, 1335, 1338
BlsI GCNGC 8 cut(s) 136, 409, 433, 844, 847, 1051, 1336, 1339
Bme1390I CCNGG 2 cut(s) 178, 581
Bme18I GGWCC 5 cut(s) 66, 393, 724, 748, 1277
BmgT120I GGNCC 5 cut(s) 66, 393, 724, 748, 1277
BmiI GGNNCC 2 cut(s) 67, 726
BmrFI CCNGG 2 cut(s) 178, 581
BmsI GCATC 3 cut(s) 121, 918, 970
BpiI GAAGAC 1 cut(s) 484
BplI GAGNNNNNCTC 2 cut(s) 895, 927
BpmI CTGGAG 1 cut(s) 682
BpuMI CCSGG 1 cut(s) 581
Bsa29I ATCGAT 1 cut(s) 1609
BsaBI GATNNNNATC 1 cut(s) 932
BsaI GGTCTC 1 cut(s) 647
BsaJI CCNNGG 4 cut(s) 102, 294, 396, 402
BsaXI ACNNNNNCTCC 2 cut(s) 1545, 1575
Bsc4I CCNNNNNNNGG 1 cut(s) 26
Bse1I ACTGG 2 cut(s) 665, 858
Bse8I GATNNNNATC 1 cut(s) 932
BseBI CCWGG 1 cut(s) 178
BseCI ATCGAT 1 cut(s) 1609
BseDI CCNNGG 4 cut(s) 102, 294, 396, 402
BseGI GGATG 4 cut(s) 93, 136, 933, 1298
BseJI GATNNNNATC 1 cut(s) 932
BseLI CCNNNNNNNGG 1 cut(s) 26
BseMII CTCAG 4 cut(s) 87, 528, 720, 1410
BseNI ACTGG 2 cut(s) 665, 858
BseRI GAGGAG 1 cut(s) 890
BseSI GKGCMC 1 cut(s) 1330
BseXI GCAGC 7 cut(s) 121, 394, 443, 854, 1036, 1346, 1349
BseYI CCCAGC 1 cut(s) 1287
BsgI GTGCAG 3 cut(s) 450, 1387, 1610
Bsh1285I CGRYCG 2 cut(s) 1546, 1613
BshFI GGCC 2 cut(s) 401, 1374
BshVI ATCGAT 1 cut(s) 1609
BsiEI CGRYCG 2 cut(s) 1546, 1613
BsiHKAI GWGCWC 3 cut(s) 114, 1330, 1584
BsiSI CCGG 1 cut(s) 581
BslFI GGGAC 2 cut(s) 79, 710
BslI CCNNNNNNNGG 1 cut(s) 26
BsmAI GTCTC 3 cut(s) 625, 647, 738
BsmBI CGTCTC 1 cut(s) 625
BsmFI GGGAC 2 cut(s) 79, 710
BsmI GAATGC 1 cut(s) 1466
BsnI GGCC 2 cut(s) 401, 1374
Bso31I GGTCTC 1 cut(s) 647
Bsp1286I GDGCHC 3 cut(s) 114, 1330, 1584
Bsp143I GATC 4 cut(s) 776, 1543, 1606, 1610
Bsp19I CCATGG 1 cut(s) 396
BspACI CCGC 5 cut(s) 488, 846, 863, 1061, 1245
BspANI GGCC 2 cut(s) 401, 1374
BspCNI CTCAG 4 cut(s) 88, 529, 721, 1409
BspDI ATCGAT 1 cut(s) 1609
BspHI TCATGA 1 cut(s) 249
BspLI GGNNCC 2 cut(s) 67, 726
BspTNI GGTCTC 1 cut(s) 647
BsrI ACTGG 2 cut(s) 665, 858
BssECI CCNNGG 4 cut(s) 102, 294, 396, 402
BssMI GATC 4 cut(s) 776, 1543, 1606, 1610
BssT1I CCWWGG 2 cut(s) 396, 402
Bst2UI CCWGG 1 cut(s) 178
Bst4CI ACNGT 5 cut(s) 761, 988, 1057, 1081, 1212
BstAPI GCANNNNNTGC 2 cut(s) 1058, 1588
BstC8I GCNNGC 4 cut(s) 196, 490, 675, 1326
BstDEI CTNAG 5 cut(s) 96, 537, 729, 1316, 1396
BstDSI CCRYGG 1 cut(s) 396
BstF5I GGATG 4 cut(s) 93, 136, 933, 1298
BstHHI GCGC 1 cut(s) 200
BstKTI GATC 4 cut(s) 779, 1546, 1609, 1613
BstMAI GTCTC 3 cut(s) 625, 647, 738
BstMBI GATC 4 cut(s) 776, 1543, 1606, 1610
BstMCI CGRYCG 2 cut(s) 1546, 1613
BstMWI GCNNNNNNNGC 7 cut(s) 206, 407, 510, 1058, 1334, 1346, 1588
BstNI CCWGG 1 cut(s) 178
BstSCI CCNGG 2 cut(s) 176, 579
BstSLI GKGCMC 1 cut(s) 1330
BstV1I GCAGC 7 cut(s) 121, 394, 443, 854, 1036, 1346, 1349
BstV2I GAAGAC 1 cut(s) 484
BstXI CCANNNNNNTGG 1 cut(s) 403
Bsu15I ATCGAT 1 cut(s) 1609
BsuRI GGCC 2 cut(s) 401, 1374
BsuTUI ATCGAT 1 cut(s) 1609
BtgI CCRYGG 1 cut(s) 396
BtsCI GGATG 4 cut(s) 93, 136, 933, 1298
BtsI GCAGTG 2 cut(s) 1356, 1375
BtsIMutI CAGTG 6 cut(s) 566, 786, 865, 993, 1356, 1375
Cac8I GCNNGC 4 cut(s) 196, 490, 675, 1326
CciI TCATGA 1 cut(s) 249
CfoI GCGC 1 cut(s) 200
Cfr13I GGNCC 5 cut(s) 66, 393, 724, 748, 1277
ClaI ATCGAT 1 cut(s) 1609
Csp6I GTAC 3 cut(s) 79, 299, 1043
CviAII CATG 5 cut(s) 221, 250, 397, 514, 1384
CviQI GTAC 3 cut(s) 79, 299, 1043
DdeI CTNAG 5 cut(s) 96, 537, 729, 1316, 1396
DpnI GATC 4 cut(s) 778, 1545, 1608, 1612
DpnII GATC 4 cut(s) 776, 1543, 1606, 1610
DraI TTTAAA 1 cut(s) 285
DraIII CACNNNGTG 1 cut(s) 1588
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 2 cut(s) 396, 402
Eco24I GRGCYC 1 cut(s) 114
Eco31I GGTCTC 1 cut(s) 647
Eco32I GATATC 2 cut(s) 376, 543
Eco47I GGWCC 5 cut(s) 66, 393, 724, 748, 1277
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 737
EcoICRI GAGCTC 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 948
EcoRII CCWGG 1 cut(s) 176
EcoRV GATATC 2 cut(s) 376, 543
EcoT14I CCWWGG 2 cut(s) 396, 402
EcoT22I ATGCAT 1 cut(s) 634
EcoT38I GRGCYC 1 cut(s) 114
ErhI CCWWGG 2 cut(s) 396, 402
Esp3I CGTCTC 1 cut(s) 625
FaeI CATG 5 cut(s) 224, 253, 400, 517, 1387
FalI AAGNNNNNCTT 2 cut(s) 297, 329
FaqI GGGAC 2 cut(s) 79, 710
FatI CATG 5 cut(s) 220, 249, 396, 513, 1383
FauI CCCGC 1 cut(s) 481
FblI GTMKAC 1 cut(s) 1473
Fnu4HI GCNGC 8 cut(s) 135, 408, 432, 843, 846, 1050, 1335, 1338
FokI GGATG 4 cut(s) 100, 143, 940, 1285
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 8 cut(s) 135, 408, 432, 843, 846, 1050, 1335, 1338
FspBI CTAG 2 cut(s) 1376, 1568
GlaI GCGC 1 cut(s) 199
GluI GCNGC 8 cut(s) 135, 408, 432, 843, 846, 1050, 1335, 1338
GsaI CCCAGC 1 cut(s) 1291
GsuI CTGGAG 1 cut(s) 682
HaeIII GGCC 2 cut(s) 401, 1374
HapII CCGG 1 cut(s) 581
HhaI GCGC 1 cut(s) 200
Hin1II CATG 5 cut(s) 224, 253, 400, 517, 1387
Hin6I GCGC 1 cut(s) 198
HinP1I GCGC 1 cut(s) 198
HinfI GANTC 6 cut(s) 55, 92, 98, 480, 731, 904
HpaII CCGG 1 cut(s) 581
HphI GGTGA 1 cut(s) 537
Hpy166II GTNNAC 3 cut(s) 393, 1328, 1474
Hpy188I TCNGA 9 cut(s) 97, 103, 165, 373, 476, 756, 1121, 1303, 1548
Hpy188III TCNNGA 5 cut(s) 20, 250, 275, 1487, 1614
Hpy8I GTNNAC 3 cut(s) 393, 1328, 1474
Hpy99I CGWCG 1 cut(s) 1604
HpyAV CCTTC 4 cut(s) 462, 702, 761, 924
HpyCH4III ACNGT 5 cut(s) 761, 988, 1057, 1081, 1212
HpyCH4IV ACGT 3 cut(s) 618, 740, 1251
HpyF10VI GCNNNNNNNGC 7 cut(s) 206, 407, 510, 1058, 1334, 1346, 1588
HpyF3I CTNAG 5 cut(s) 96, 537, 729, 1316, 1396
HpySE526I ACGT 3 cut(s) 618, 740, 1251
Hsp92II CATG 5 cut(s) 224, 253, 400, 517, 1387
HspAI GCGC 1 cut(s) 198
Kzo9I GATC 4 cut(s) 776, 1543, 1606, 1610
LmnI GCTCC 4 cut(s) 165, 257, 1346, 1510
Lsp1109I GCAGC 7 cut(s) 121, 394, 443, 854, 1036, 1346, 1349
LweI GCATC 3 cut(s) 121, 918, 970
MaeI CTAG 2 cut(s) 1376, 1568
MaeII ACGT 3 cut(s) 618, 740, 1251
MaeIII GTNAC 2 cut(s) 886, 1069
MalI GATC 4 cut(s) 778, 1545, 1608, 1612
MboI GATC 4 cut(s) 776, 1543, 1606, 1610
MboII GAAGA 9 cut(s) 143, 218, 290, 317, 489, 1000, 1134, 1252, 1300
MhlI GDGCHC 3 cut(s) 114, 1330, 1584
MlyI GAGTC 4 cut(s) 107, 474, 740, 913
MmeI TCCRAC 4 cut(s) 454, 761, 905, 1249
Mph1103I ATGCAT 1 cut(s) 634
MroXI GAANNNNTTC 1 cut(s) 309
MseI TTAA 2 cut(s) 284, 1026
MspI CCGG 1 cut(s) 581
MspR9I CCNGG 2 cut(s) 178, 581
Mva1269I GAATGC 1 cut(s) 1466
MvaI CCWGG 1 cut(s) 178
MwoI GCNNNNNNNGC 7 cut(s) 206, 407, 510, 1058, 1334, 1346, 1588
NciI CCSGG 1 cut(s) 581
NcoI CCATGG 1 cut(s) 396
NdeII GATC 4 cut(s) 776, 1543, 1606, 1610
NlaIII CATG 5 cut(s) 224, 253, 400, 517, 1387
NlaIV GGNNCC 2 cut(s) 67, 726
NmeAIII GCCGAG 1 cut(s) 591
NmuCI GTSAC 1 cut(s) 886
NsiI ATGCAT 1 cut(s) 634
PagI TCATGA 1 cut(s) 249
PctI GAATGC 1 cut(s) 1466
PdmI GAANNNNTTC 1 cut(s) 309
PfeI GAWTC 2 cut(s) 55, 92
PflMI CCANNNNNTGG 1 cut(s) 26
PfoI TCCNGGA 1 cut(s) 579
PkrI GCNGC 8 cut(s) 136, 409, 433, 844, 847, 1051, 1336, 1339
Ple19I CGATCG 2 cut(s) 1546, 1613
PleI GAGTC 4 cut(s) 106, 474, 739, 912
PpsI GAGTC 4 cut(s) 106, 474, 739, 912
PsiI TTATAA 2 cut(s) 593, 1088
Psp124BI GAGCTC 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 176
PspFI CCCAGC 1 cut(s) 1287
PspGI CCWGG 1 cut(s) 176
PspN4I GGNNCC 2 cut(s) 67, 726
PspPI GGNCC 5 cut(s) 66, 393, 724, 748, 1277
PvuI CGATCG 2 cut(s) 1546, 1613
RsaI GTAC 3 cut(s) 80, 300, 1044
RsaNI GTAC 3 cut(s) 79, 299, 1043
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 2 cut(s) 284, 1026
SatI GCNGC 8 cut(s) 135, 408, 432, 843, 846, 1050, 1335, 1338
Sau3AI GATC 4 cut(s) 776, 1543, 1606, 1610
Sau96I GGNCC 5 cut(s) 66, 393, 724, 748, 1277
SchI GAGTC 4 cut(s) 107, 474, 740, 913
ScrFI CCNGG 2 cut(s) 178, 581
SduI GDGCHC 3 cut(s) 114, 1330, 1584
SfaNI GCATC 3 cut(s) 121, 918, 970
SinI GGWCC 5 cut(s) 66, 393, 724, 748, 1277
SsiI CCGC 5 cut(s) 488, 846, 863, 1061, 1245
SspI AATATT 3 cut(s) 465, 588, 837
SspMI CTAG 2 cut(s) 1376, 1568
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 2 cut(s) 176, 579
StyI CCWWGG 2 cut(s) 396, 402
TaaI ACNGT 5 cut(s) 761, 988, 1057, 1081, 1212
TaiI ACGT 3 cut(s) 621, 743, 1254
TaqI TCGA 5 cut(s) 108, 1578, 1602, 1609, 1627
TatI WGTACW 2 cut(s) 78, 1042
TauI GCSGC 1 cut(s) 848
TfiI GAWTC 2 cut(s) 55, 92
Tru1I TTAA 2 cut(s) 284, 1026
Tru9I TTAA 2 cut(s) 284, 1026
TscAI CASTG 6 cut(s) 573, 786, 865, 993, 1356, 1375
TseFI GTSAC 1 cut(s) 886
TseI GCWGC 7 cut(s) 134, 407, 431, 842, 1049, 1334, 1337
Tsp45I GTSAC 1 cut(s) 886
TspDTI ATGAA 7 cut(s) 259, 444, 691, 803, 819, 846, 1404
TspRI CASTG 6 cut(s) 573, 786, 865, 993, 1356, 1375
Van91I CCANNNNNTGG 1 cut(s) 26
VneI GTGCAC 1 cut(s) 1326
VpaK11BI GGWCC 5 cut(s) 66, 393, 724, 748, 1277
XapI RAATTY 3 cut(s) 159, 603, 948
XcmI CCANNNNNNNNNTGG 1 cut(s) 227
XmiI GTMKAC 1 cut(s) 1473
XmnI GAANNNNTTC 1 cut(s) 309
XspI CTAG 2 cut(s) 1376, 1568
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.