MD17G1244000.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
29249687 .. 29252508
2822 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1244000.v1.1.491

Sequence Viewer

Length: 1602 bp
ATGGGATTGGTGGGTGTTCCAGAAATTGGAAATGGAGAAATGGGTATGTCTGGGATTCCATTGGGAACCAAGAACAAGTACAAGAGGATGGATTCTGAGCCCGAGGTCGAGCTCACAGAGGAAAACGAGGATGGTGCTTCTCGCCACCACCTTCAACAAATCAGGAGCAAAAAAACCAGGAAATATGTCCTCGCCTGCGCCATTTTTGCCTCTCTCAACTCTGTTCTTCTTGGCTATGATGTAGGTGTCATGAGTGGAGCTATCATATTCATTCAGGAAGATTTAAAGATAACCGAGGTACAAGAAGAAGTTCTTGTTGGGATTTTGAGCATTGTTTCGCTTTTCGGTAGTTTAGCCGGCGGTAAAACATCAGATATCATTGGTAGGAAGTGGACCATGGCCTTGGCTGCTGTTGTCTTTCAAGCAGGTGCAGCTACAATGACCCTTGCTCCTTCATTTGAAATATTGATGATTGGAAGACTCTTTGCGGGCGTTGGAATTGGCTTTGGTGTCATGATTGCCCCTGTTTATATCGCTGAGATATCACCCACCATTGACAGAGGCTCACTCACCTCATTCCCAGAAATATTTATAAATCTGGGAATTTTACTCGGCTACGTCTCAAACTATGCATTTTCTGGTCTTCCGGCACATATAAACTGGAGGATAATGCTTGCAGTAGGAATTACGCCTTCAATTTTCATTGGTTTTGCACTTTTCGTAATCCCCGAGTCTCCAAGGTGGTTGGTCCTTCAGAACCGTGTTGACGAGGCAAGATCAGTGTTGATGAAAACAAATGAGAAAGAAAGTGAGGTGGAGGACAGACTAAATGAAATACTAGCAGCCGCTGACAATTCTAGTGCGGGGAAGTATGAGGAGAAAAGCGTGACGAGTGAACTAATGAATCCATCTCCTTCACTTCGTCGGATGCTTATCACAGGTTTTGGAATTCAATGTTTTCAACAGATAACAGGAATAGATGCGACTGTGTACTACAGCCCCGAAATCTTCCAAGAAGCAGGAATAAAAAATAAACAAAATGTACTTGCTGCAACTGTTGCAGTGGGTGTCACAAAGACTGTTTTTATAATGGTCGCTATTCTTCTTATAGACAAGCTCGGAAGAAAGCCCTTGCTCTATGTCAGCACGATTGGAATGACGATTTGTTTATTCAGTTTAGGATTTACTCTCTCTTTTCTTGGGAAAGGACAGTTTGGCGTTGCAATGGCAATTTTATCCGTATGCGGAAATGTAGCCTTCTTCTCTGTTGGAATTGGACCTGTTTGCTGGGTTTTGACATCTGAAATCTTCCCTCTAAGGGTGCGTGCGCAAGCAGCAGCACTCGGAGGAGTGGGTAATAGGGTGTCCAGTGGCCTGGTTGCCATGTCTTTTCTCTCAGTTTCCAATGCAATTTCATTTGGTGGAACATTCTTTATCTTTTCTGCAGTCGCTGCTCTTTCTGTCGTATTTGTCCACACCTGTGTTCCAGAAACCAAAGGAAAGTCATTGGAGCAGATTGAGTCGCTTTTTCAAACTGAACATGATCAGAAAGGAGGTCAAGTGGAACTAGGAGATGTCGAGCACCTTGTGCAGAAAGGATGA

Protein Analysis

534

Amino Acids

57.23

Weight (kDa)

5.7

Isoelectric Point (pI)

40.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 66 - 510 2.1e-109 Sugar (and other) transporter
MFS_1 PF07690 72 - 459 3.1e-31 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 593, 1088
AarI CACCTGC 1 cut(s) 416
Acc16I TGCGCA 1 cut(s) 1329
Acc36I ACCTGC 1 cut(s) 416
AccB7I CCANNNNNTGG 1 cut(s) 26
AciI CCGC 5 cut(s) 360, 488, 846, 863, 1245
AcsI RAATTY 2 cut(s) 603, 948
AcuI CTGAAG 1 cut(s) 737
AdeI CACNNNGTG 1 cut(s) 1588
AfaI GTAC 4 cut(s) 80, 300, 992, 1044
AfiI CCNNNNNNNGG 2 cut(s) 26, 1318
AgsI TTSAA 7 cut(s) 155, 422, 461, 696, 953, 962, 1532
AjnI CCWGG 2 cut(s) 176, 1374
AjuI GAANNNNNNNTTGG 2 cut(s) 300, 332
AleI CACNNNNGTG 1 cut(s) 1479
AluBI AGCT 4 cut(s) 112, 260, 434, 1117
AluI AGCT 4 cut(s) 112, 260, 434, 1117
Alw21I GWGCWC 2 cut(s) 114, 1584
Alw26I GTCTC 2 cut(s) 625, 738
AlwNI CAGNNNCTG 2 cut(s) 848, 1451
Ama87I CYCGRG 2 cut(s) 101, 728
AoxI GGCC 2 cut(s) 399, 1372
ApeKI GCWGC 7 cut(s) 407, 431, 842, 1049, 1334, 1337, 1451
ApoI RAATTY 2 cut(s) 603, 948
Asp700I GAANNNNTTC 1 cut(s) 309
AspLEI GCGC 2 cut(s) 200, 1330
AspS9I GGNCC 3 cut(s) 393, 748, 1277
AsuHPI GGTGA 2 cut(s) 537, 562
AvaI CYCGRG 2 cut(s) 101, 728
AvaII GGWCC 3 cut(s) 393, 748, 1277
BanII GRGCYC 2 cut(s) 102, 114
BbsI GAAGAC 2 cut(s) 484, 635
Bbv12I GWGCWC 2 cut(s) 114, 1584
BbvI GCAGC 7 cut(s) 394, 443, 854, 1036, 1346, 1349, 1438
BccI CCATC 3 cut(s) 82, 125, 916
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 2 cut(s) 178, 1376
BclI TGATCA 1 cut(s) 1543
BcoDI GTCTC 2 cut(s) 625, 738
BfaI CTAG 3 cut(s) 839, 858, 1568
BfmI CTRYAG 2 cut(s) 994, 1443
BfuAI ACCTGC 1 cut(s) 416
BisI GCNGC 8 cut(s) 408, 432, 843, 846, 1050, 1335, 1338, 1452
BlsI GCNGC 8 cut(s) 409, 433, 844, 847, 1051, 1336, 1339, 1453
Bme1390I CCNGG 2 cut(s) 178, 1376
Bme18I GGWCC 3 cut(s) 393, 748, 1277
BmeT110I CYCGRG 2 cut(s) 101, 728
BmgT120I GGNCC 3 cut(s) 393, 748, 1277
BmiI GGNNCC 1 cut(s) 67
BmrFI CCNGG 2 cut(s) 178, 1376
BmsI GCATC 2 cut(s) 918, 970
BpiI GAAGAC 2 cut(s) 484, 635
BplI GAGNNNNNCTC 2 cut(s) 552, 584
BpmI CTGGAG 1 cut(s) 682
BsaBI GATNNNNATC 1 cut(s) 932
BsaJI CCNNGG 5 cut(s) 102, 294, 396, 402, 737
BsaXI ACNNNNNCTCC 4 cut(s) 433, 463, 1545, 1575
Bsc4I CCNNNNNNNGG 2 cut(s) 26, 1318
Bse118I RCCGGY 1 cut(s) 356
Bse1I ACTGG 2 cut(s) 665, 1368
Bse3DI GCAATG 1 cut(s) 1230
Bse8I GATNNNNATC 1 cut(s) 932
BseBI CCWGG 2 cut(s) 178, 1376
BseDI CCNNGG 5 cut(s) 102, 294, 396, 402, 737
BseGI GGATG 3 cut(s) 93, 136, 933
BseJI GATNNNNATC 1 cut(s) 932
BseLI CCNNNNNNNGG 2 cut(s) 26, 1318
BseMI GCAATG 1 cut(s) 1230
BseMII CTCAG 3 cut(s) 87, 528, 1410
BseNI ACTGG 2 cut(s) 665, 1368
BseRI GAGGAG 2 cut(s) 890, 1362
BseXI GCAGC 7 cut(s) 394, 443, 854, 1036, 1346, 1349, 1438
BseYI CCCAGC 1 cut(s) 1287
BsgI GTGCAG 1 cut(s) 450
BshFI GGCC 2 cut(s) 401, 1374
BsiHKAI GWGCWC 2 cut(s) 114, 1584
BsiHKCI CYCGRG 2 cut(s) 101, 728
BsiSI CCGG 2 cut(s) 357, 647
BslI CCNNNNNNNGG 2 cut(s) 26, 1318
BsmAI GTCTC 2 cut(s) 625, 738
BsmBI CGTCTC 1 cut(s) 625
BsnI GGCC 2 cut(s) 401, 1374
BsoBI CYCGRG 2 cut(s) 101, 728
Bsp1286I GDGCHC 3 cut(s) 102, 114, 1584
Bsp143I GATC 2 cut(s) 776, 1543
Bsp19I CCATGG 1 cut(s) 396
BspACI CCGC 5 cut(s) 360, 488, 846, 863, 1245
BspANI GGCC 2 cut(s) 401, 1374
BspCNI CTCAG 3 cut(s) 88, 529, 1409
BspHI TCATGA 2 cut(s) 249, 513
BspLI GGNNCC 1 cut(s) 67
BspMAI CTGCAG 1 cut(s) 1447
BspMI ACCTGC 1 cut(s) 416
BsrDI GCAATG 1 cut(s) 1230
BsrFI RCCGGY 1 cut(s) 356
BsrI ACTGG 2 cut(s) 665, 1368
BssAI RCCGGY 1 cut(s) 356
BssECI CCNNGG 5 cut(s) 102, 294, 396, 402, 737
BssMI GATC 2 cut(s) 776, 1543
BssT1I CCWWGG 3 cut(s) 396, 402, 737
Bst2UI CCWGG 2 cut(s) 178, 1376
Bst4CI ACNGT 5 cut(s) 761, 988, 1057, 1081, 1212
BstAPI GCANNNNNTGC 3 cut(s) 1058, 1451, 1588
BstC8I GCNNGC 6 cut(s) 196, 358, 490, 675, 1326, 1332
BstDEI CTNAG 4 cut(s) 96, 537, 1316, 1396
BstDSI CCRYGG 1 cut(s) 396
BstF5I GGATG 3 cut(s) 93, 136, 933
BstHHI GCGC 2 cut(s) 200, 1330
BstKTI GATC 2 cut(s) 779, 1546
BstMAI GTCTC 2 cut(s) 625, 738
BstMBI GATC 2 cut(s) 776, 1543
BstMWI GCNNNNNNNGC 7 cut(s) 206, 407, 431, 1058, 1334, 1451, 1588
BstNI CCWGG 2 cut(s) 178, 1376
BstSCI CCNGG 2 cut(s) 176, 1374
BstSFI CTRYAG 2 cut(s) 994, 1443
BstV1I GCAGC 7 cut(s) 394, 443, 854, 1036, 1346, 1349, 1438
BstV2I GAAGAC 2 cut(s) 484, 635
BstXI CCANNNNNNTGG 2 cut(s) 403, 1375
BsuRI GGCC 2 cut(s) 401, 1374
BtgI CCRYGG 1 cut(s) 396
BtsCI GGATG 3 cut(s) 93, 136, 933
BtsI GCAGTG 1 cut(s) 1068
BtsIMutI CAGTG 3 cut(s) 786, 1068, 1375
BveI ACCTGC 1 cut(s) 416
Cac8I GCNNGC 6 cut(s) 196, 358, 490, 675, 1326, 1332
CaiI CAGNNNCTG 2 cut(s) 848, 1451
CciI TCATGA 2 cut(s) 249, 513
CfoI GCGC 2 cut(s) 200, 1330
Cfr10I RCCGGY 1 cut(s) 356
Cfr13I GGNCC 3 cut(s) 393, 748, 1277
Csp6I GTAC 4 cut(s) 79, 299, 991, 1043
CviAII CATG 5 cut(s) 250, 397, 514, 1384, 1541
CviQI GTAC 4 cut(s) 79, 299, 991, 1043
DdeI CTNAG 4 cut(s) 96, 537, 1316, 1396
DpnI GATC 2 cut(s) 778, 1545
DpnII GATC 2 cut(s) 776, 1543
DraI TTTAAA 1 cut(s) 285
DraIII CACNNNGTG 1 cut(s) 1588
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 3 cut(s) 396, 402, 737
Eco24I GRGCYC 2 cut(s) 102, 114
Eco32I GATATC 2 cut(s) 376, 543
Eco47I GGWCC 3 cut(s) 393, 748, 1277
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 737
Eco88I CYCGRG 2 cut(s) 101, 728
EcoICRI GAGCTC 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 948
EcoRII CCWGG 2 cut(s) 176, 1374
EcoRV GATATC 2 cut(s) 376, 543
EcoT14I CCWWGG 3 cut(s) 396, 402, 737
EcoT22I ATGCAT 1 cut(s) 634
EcoT38I GRGCYC 2 cut(s) 102, 114
ErhI CCWWGG 3 cut(s) 396, 402, 737
Esp3I CGTCTC 1 cut(s) 625
FaeI CATG 5 cut(s) 253, 400, 517, 1387, 1544
FalI AAGNNNNNCTT 2 cut(s) 297, 329
FatI CATG 5 cut(s) 249, 396, 513, 1383, 1540
FauI CCCGC 2 cut(s) 481, 856
FbaI TGATCA 1 cut(s) 1543
Fnu4HI GCNGC 8 cut(s) 408, 432, 843, 846, 1050, 1335, 1338, 1452
FokI GGATG 3 cut(s) 100, 143, 940
FriOI GRGCYC 2 cut(s) 102, 114
Fsp4HI GCNGC 8 cut(s) 408, 432, 843, 846, 1050, 1335, 1338, 1452
FspBI CTAG 3 cut(s) 839, 858, 1568
FspI TGCGCA 1 cut(s) 1329
GlaI GCGC 2 cut(s) 199, 1329
GluI GCNGC 8 cut(s) 408, 432, 843, 846, 1050, 1335, 1338, 1452
GsaI CCCAGC 1 cut(s) 1291
GsuI CTGGAG 1 cut(s) 682
HaeIII GGCC 2 cut(s) 401, 1374
HapII CCGG 2 cut(s) 357, 647
HhaI GCGC 2 cut(s) 200, 1330
Hin1II CATG 5 cut(s) 253, 400, 517, 1387, 1544
Hin6I GCGC 2 cut(s) 198, 1328
HinP1I GCGC 2 cut(s) 198, 1328
HincII GTYRAC 1 cut(s) 766
HindII GTYRAC 1 cut(s) 766
HinfI GANTC 6 cut(s) 55, 92, 480, 731, 904, 1520
HpaII CCGG 2 cut(s) 357, 647
HphI GGTGA 2 cut(s) 537, 562
Hpy166II GTNNAC 5 cut(s) 393, 766, 896, 991, 1474
Hpy188I TCNGA 8 cut(s) 97, 373, 756, 927, 1121, 1303, 1346, 1548
Hpy188III TCNNGA 6 cut(s) 20, 163, 250, 275, 514, 1487
Hpy8I GTNNAC 5 cut(s) 393, 766, 896, 991, 1474
Hpy99I CGWCG 1 cut(s) 927
HpyAV CCTTC 6 cut(s) 161, 462, 702, 761, 924, 1267
HpyCH4III ACNGT 5 cut(s) 761, 988, 1057, 1081, 1212
HpyCH4IV ACGT 1 cut(s) 618
HpyF10VI GCNNNNNNNGC 7 cut(s) 206, 407, 431, 1058, 1334, 1451, 1588
HpyF3I CTNAG 4 cut(s) 96, 537, 1316, 1396
HpySE526I ACGT 1 cut(s) 618
Hsp92II CATG 5 cut(s) 253, 400, 517, 1387, 1544
HspAI GCGC 2 cut(s) 198, 1328
KroI GCCGGC 1 cut(s) 356
KroNI GCCGGC 1 cut(s) 358
Ksp22I TGATCA 1 cut(s) 1543
Kzo9I GATC 2 cut(s) 776, 1543
LmnI GCTCC 4 cut(s) 165, 257, 454, 1510
Lsp1109I GCAGC 7 cut(s) 394, 443, 854, 1036, 1346, 1349, 1438
LweI GCATC 2 cut(s) 918, 970
MaeI CTAG 3 cut(s) 839, 858, 1568
MaeII ACGT 1 cut(s) 618
MaeIII GTNAC 2 cut(s) 886, 1069
MalI GATC 2 cut(s) 778, 1545
MboI GATC 2 cut(s) 776, 1543
MhlI GDGCHC 3 cut(s) 102, 114, 1584
MlyI GAGTC 3 cut(s) 474, 740, 1529
MmeI TCCRAC 3 cut(s) 475, 905, 1249
Mph1103I ATGCAT 1 cut(s) 634
MroNI GCCGGC 1 cut(s) 356
MroXI GAANNNNTTC 1 cut(s) 309
MseI TTAA 1 cut(s) 284
MslI CAYNNNNRTG 1 cut(s) 1479
MspA1I CMGCKG 1 cut(s) 848
MspI CCGG 2 cut(s) 357, 647
MspR9I CCNGG 2 cut(s) 178, 1376
MvaI CCWGG 2 cut(s) 178, 1376
MwoI GCNNNNNNNGC 7 cut(s) 206, 407, 431, 1058, 1334, 1451, 1588
NaeI GCCGGC 1 cut(s) 358
NcoI CCATGG 1 cut(s) 396
NdeII GATC 2 cut(s) 776, 1543
NgoMIV GCCGGC 1 cut(s) 356
NlaIII CATG 5 cut(s) 253, 400, 517, 1387, 1544
NlaIV GGNNCC 1 cut(s) 67
NmeAIII GCCGAG 1 cut(s) 591
NmuCI GTSAC 2 cut(s) 886, 1069
NsbI TGCGCA 1 cut(s) 1329
NsiI ATGCAT 1 cut(s) 634
OliI CACNNNNGTG 1 cut(s) 1479
PagI TCATGA 2 cut(s) 249, 513
PaqCI CACCTGC 1 cut(s) 416
PcsI WCGNNNNNNNCGW 1 cut(s) 726
PdiI GCCGGC 1 cut(s) 358
PdmI GAANNNNTTC 1 cut(s) 309
PfeI GAWTC 3 cut(s) 55, 92, 904
PflMI CCANNNNNTGG 1 cut(s) 26
PkrI GCNGC 8 cut(s) 409, 433, 844, 847, 1051, 1336, 1339, 1453
PleI GAGTC 3 cut(s) 474, 739, 1528
PpsI GAGTC 3 cut(s) 474, 739, 1528
PsiI TTATAA 2 cut(s) 593, 1088
Psp124BI GAGCTC 1 cut(s) 114
Psp6I CCWGG 2 cut(s) 176, 1374
PspFI CCCAGC 1 cut(s) 1287
PspGI CCWGG 2 cut(s) 176, 1374
PspN4I GGNNCC 1 cut(s) 67
PspPI GGNCC 3 cut(s) 393, 748, 1277
PstI CTGCAG 1 cut(s) 1447
PstNI CAGNNNCTG 2 cut(s) 848, 1451
RsaI GTAC 4 cut(s) 80, 300, 992, 1044
RsaNI GTAC 4 cut(s) 79, 299, 991, 1043
RseI CAYNNNNRTG 1 cut(s) 1479
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 1 cut(s) 284
SatI GCNGC 8 cut(s) 408, 432, 843, 846, 1050, 1335, 1338, 1452
Sau3AI GATC 2 cut(s) 776, 1543
Sau96I GGNCC 3 cut(s) 393, 748, 1277
SchI GAGTC 3 cut(s) 474, 740, 1529
ScrFI CCNGG 2 cut(s) 178, 1376
SduI GDGCHC 3 cut(s) 102, 114, 1584
SfaNI GCATC 2 cut(s) 918, 970
SfcI CTRYAG 2 cut(s) 994, 1443
SinI GGWCC 3 cut(s) 393, 748, 1277
SmiMI CAYNNNNRTG 1 cut(s) 1479
SsiI CCGC 5 cut(s) 360, 488, 846, 863, 1245
SspI AATATT 2 cut(s) 465, 588
SspMI CTAG 3 cut(s) 839, 858, 1568
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 2 cut(s) 176, 1374
StyI CCWWGG 3 cut(s) 396, 402, 737
TaaI ACNGT 5 cut(s) 761, 988, 1057, 1081, 1212
TaiI ACGT 1 cut(s) 621
TaqI TCGA 2 cut(s) 108, 1578
TatI WGTACW 3 cut(s) 78, 990, 1042
TauI GCSGC 1 cut(s) 848
TfiI GAWTC 3 cut(s) 55, 92, 904
Tru1I TTAA 1 cut(s) 284
Tru9I TTAA 1 cut(s) 284
TscAI CASTG 3 cut(s) 786, 1068, 1375
TseFI GTSAC 2 cut(s) 886, 1069
TseI GCWGC 7 cut(s) 407, 431, 842, 1049, 1334, 1337, 1451
Tsp45I GTSAC 2 cut(s) 886, 1069
TspDTI ATGAA 7 cut(s) 259, 444, 691, 803, 846, 917, 1404
TspGWI ACGGA 1 cut(s) 1228
TspRI CASTG 3 cut(s) 786, 1068, 1375
Van91I CCANNNNNTGG 1 cut(s) 26
VpaK11BI GGWCC 3 cut(s) 393, 748, 1277
XapI RAATTY 2 cut(s) 603, 948
XmnI GAANNNNTTC 1 cut(s) 309
XspI CTAG 3 cut(s) 839, 858, 1568
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.