Rh7AG318200
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
35885912 .. 35888595
2684 bp
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UTR
Exon/CDS
Intron
Rh7AG318200.1

Sequence Viewer

Length: 1578 bp
ATGGGTACTGCTGAGAATGAAACGGGTTTGTCTGGGATTCCATTGGGAATTACCAAGAACAAATATTCTGAGCTCACAAAGGTTGATGATGATTATGATGAAGATGCTTCCCACCATCATCATCAACAACAAAAAAGGAGTGCAAGTACCAGGAAGTATGTCTTTGCTTGTGCCATCTTTGCCTCCCTCAACTCTGTTCTTCTTGGCTATGATGTAGGTGTGATGAGTGGGGCAATCATATTCATTCACGAAGATTTGAAGATAACCGAAGTACAGGAAGAAGTTCTTGTTGGGATTTTGAGCATTGTTTCGATTTTTGGTAGTTTAGCTGGTGGTAGAACATCAGACATTATAGGTAGAAAGTGGACAATGGCATTAGCTGCTCTTGTCTTTCAAACAGGTGCAGTTGTAATGACACTTGCTCCTTCATTTGAAGTGCTGATGATTGGAAGACTCTTGGCCGGTGTTGGGATTGGGTTTGGTGTCATGATTGCCCCGGTTTATATTGCTGAGATATCACCCACCATTGCCAGAGGCTCACTCACTTCATTTCCTGAAATTTTTATAAATCTCGGAATTTTGCTGGGCTATGTTTCAAACTATGCATTTTCTGGTCTTCCAGCACATATAAACTGGAGGATAATGCTCGCAGTAGGAATTCTGCCTTCAATTTTCATTGGTTTTGCACTTTTCATAATCCCCGAGTCCCCCAGGTGGTTGGTCATGCAGAACCGCATTGACGAGGCAAGATCAGTGCTGATGAAAACAAATGAGGATCAAAGTGAGGTGGAGGAGAGACTGAATGAAATACAAGAGGCTGCTGGAAATTCCAATGCAGACAAGTATGAGGAGAAAAGTGTGGCGCGTGAACTGTTGAGTCCTTCTCCTTCACTTCGTAGGATGCTGATCACTGGTTTTGGAATTCAATGTTTTCAACAGATAACAGGAATAGATGCAACAGTGTACTACAGCCCTGAAATCTTCAGACAAGCTGGTATTGAGGACAAATCGAATCTACTTGCTGCAACTGTTGCTGTGGGCGTCACCAAGACTGCTTTCATATTGGTGGCTATTTTGCTTATTGACAAGCTTGGAAGAAAGCCCTTGCTCTATATCAGCACAATCGGAATGACAATCTGTTTATTCAGTTTGGGAATTAGTCTCTCTGTACTAGGGAAGGGACCTATTGGAATTGCATTTGCCATTTTGTCAGTTTGTGGGAATGTAGCCTTCTTCTCTGTTGGAATTGGCCCTGTTTGCTGGGTTGTAACATCCGAAATCTTTCCTCTAAGGTTGCGTGCTCAAGCATCAGCGCTTGGAGCTGTGGGTAACAGGGTCTGCAGTGGCCTAATTGCCATGTCTTTTCTCTCAGTTTCTGATGCGATTTCATTTGGCGGAACATTCTTCATCTTTTCTGCAATATCAGCTCTTTCTGTTTTGTTTGTCTACAGACTTGTCCCAGAAACTAAAGGAAAGTCATTGGAACAGATTGAGCTTCTTTTTCAGACTGATGAACTTGGATGGGAAGGAGGTCAAGTTGAACTAGGAGATGTCGAGCACCTTGTGCAAAAAGAATGA

Protein Analysis

525

Amino Acids

56.68

Weight (kDa)

5.22

Isoelectric Point (pI)

37.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 57 - 501 9.3e-112 Sugar (and other) transporter
MFS_1 PF07690 63 - 449 4.7e-30 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 566
AccI GTMKAC 1 cut(s) 1446
AccII CGCG 1 cut(s) 865
AciI CCGC 2 cut(s) 733, 1395
AclWI GGATC 1 cut(s) 783
AcoI YGGCCR 1 cut(s) 459
AcsI RAATTY 5 cut(s) 558, 576, 657, 826, 921
AcuI CTGAAG 1 cut(s) 967
AcyI GRCGYC 1 cut(s) 1041
AdeI CACNNNGTG 1 cut(s) 1564
AfaI GTAC 5 cut(s) 7, 148, 273, 965, 1170
AfeI AGCGCT 1 cut(s) 1314
AfiI CCNNNNNNNGG 2 cut(s) 468, 714
AgsI TTSAA 8 cut(s) 259, 395, 434, 597, 669, 926, 935, 1541
AjnI CCWGG 2 cut(s) 149, 710
AjuI GAANNNNNNNTTGG 4 cut(s) 273, 305, 1040, 1072
AluBI AGCT 8 cut(s) 73, 329, 380, 992, 1090, 1322, 1427, 1495
AluI AGCT 8 cut(s) 73, 329, 380, 992, 1090, 1322, 1427, 1495
Alw21I GWGCWC 3 cut(s) 75, 1303, 1560
Alw26I GTCTC 2 cut(s) 790, 1166
AlwI GGATC 1 cut(s) 783
AlwNI CAGNNNCTG 2 cut(s) 1338, 1376
Ama87I CYCGRG 1 cut(s) 701
Aor51HI AGCGCT 1 cut(s) 1314
AoxI GGCC 3 cut(s) 459, 1249, 1345
ApeKI GCWGC 3 cut(s) 380, 818, 1022
ApoI RAATTY 5 cut(s) 558, 576, 657, 826, 921
Asp700I GAANNNNTTC 2 cut(s) 282, 1281
AspLEI GCGC 2 cut(s) 865, 1315
AspS9I GGNCC 2 cut(s) 1181, 1250
AsuC2I CCSGG 1 cut(s) 497
AsuHPI GGTGA 2 cut(s) 510, 1036
AvaI CYCGRG 1 cut(s) 701
AvaII GGWCC 1 cut(s) 1181
BanII GRGCYC 1 cut(s) 75
BbsI GAAGAC 2 cut(s) 457, 608
Bbv12I GWGCWC 3 cut(s) 75, 1303, 1560
BbvI GCAGC 3 cut(s) 367, 805, 1009
BccI CCATC 3 cut(s) 123, 182, 1515
BciT130I CCWGG 2 cut(s) 151, 712
BclI TGATCA 1 cut(s) 906
BcnI CCSGG 1 cut(s) 497
BcoDI GTCTC 2 cut(s) 790, 1166
BfaI CTAG 2 cut(s) 1172, 1544
BfmI CTRYAG 3 cut(s) 967, 1339, 1447
BfoI RGCGCY 1 cut(s) 1316
BisI GCNGC 3 cut(s) 381, 819, 1023
BlsI GCNGC 3 cut(s) 382, 820, 1024
Bme1390I CCNGG 3 cut(s) 151, 497, 712
Bme18I GGWCC 1 cut(s) 1181
BmeT110I CYCGRG 1 cut(s) 701
BmgT120I GGNCC 2 cut(s) 1181, 1250
BmiI GGNNCC 1 cut(s) 1182
BmrFI CCNGG 3 cut(s) 151, 497, 712
BmsI GCATC 5 cut(s) 94, 891, 943, 1316, 1369
BpiI GAAGAC 2 cut(s) 457, 608
BplI GAGNNNNNCTC 4 cut(s) 525, 557, 868, 900
BpmI CTGGAG 1 cut(s) 655
BpuEI CTTGAG 1 cut(s) 1287
BpuMI CCSGG 1 cut(s) 497
BsaBI GATNNNNATC 1 cut(s) 905
BsaHI GRCGYC 1 cut(s) 1041
BsaJI CCNNGG 2 cut(s) 495, 710
BsaXI ACNNNNNCTCC 6 cut(s) 130, 160, 406, 436, 1521, 1551
Bsc4I CCNNNNNNNGG 2 cut(s) 468, 714
Bse118I RCCGGY 1 cut(s) 461
Bse1I ACTGG 2 cut(s) 638, 916
Bse3DI GCAATG 1 cut(s) 525
Bse8I GATNNNNATC 1 cut(s) 905
BseBI CCWGG 2 cut(s) 151, 712
BseDI CCNNGG 2 cut(s) 495, 710
BseGI GGATG 3 cut(s) 906, 1271, 1526
BseJI GATNNNNATC 1 cut(s) 905
BseLI CCNNNNNNNGG 2 cut(s) 468, 714
BseMI GCAATG 1 cut(s) 525
BseMII CTCAG 3 cut(s) 60, 501, 1383
BseNI ACTGG 2 cut(s) 638, 916
BseRI GAGGAG 2 cut(s) 806, 863
BseXI GCAGC 3 cut(s) 367, 805, 1009
BseYI CCCAGC 2 cut(s) 583, 1260
BsgI GTGCAG 1 cut(s) 423
Bsh1236I CGCG 1 cut(s) 865
BshFI GGCC 3 cut(s) 461, 1251, 1347
BsiHKAI GWGCWC 3 cut(s) 75, 1303, 1560
BsiHKCI CYCGRG 1 cut(s) 701
BsiSI CCGG 2 cut(s) 462, 497
BslFI GGGAC 3 cut(s) 691, 1194, 1442
BslI CCNNNNNNNGG 2 cut(s) 468, 714
BsmAI GTCTC 2 cut(s) 790, 1166
BsmFI GGGAC 3 cut(s) 691, 1194, 1442
BsnI GGCC 3 cut(s) 461, 1251, 1347
BsoBI CYCGRG 1 cut(s) 701
Bsp1286I GDGCHC 3 cut(s) 75, 1303, 1560
Bsp143I GATC 3 cut(s) 749, 775, 906
BspACI CCGC 2 cut(s) 733, 1395
BspANI GGCC 3 cut(s) 461, 1251, 1347
BspCNI CTCAG 4 cut(s) 4, 61, 502, 1382
BspFNI CGCG 1 cut(s) 865
BspHI TCATGA 1 cut(s) 486
BspLI GGNNCC 1 cut(s) 1182
BspMAI CTGCAG 1 cut(s) 1343
BspPI GGATC 1 cut(s) 783
BsrDI GCAATG 1 cut(s) 525
BsrFI RCCGGY 1 cut(s) 461
BsrI ACTGG 2 cut(s) 638, 916
BssAI RCCGGY 1 cut(s) 461
BssECI CCNNGG 2 cut(s) 495, 710
BssMI GATC 3 cut(s) 749, 775, 906
BssNI GRCGYC 1 cut(s) 1041
Bst2UI CCWGG 2 cut(s) 151, 712
Bst4CI ACNGT 3 cut(s) 873, 961, 1030
BstACI GRCGYC 1 cut(s) 1041
BstAPI GCANNNNNTGC 3 cut(s) 380, 1031, 1564
BstC8I GCNNGC 2 cut(s) 648, 1299
BstDEI CTNAG 5 cut(s) 12, 69, 510, 1289, 1369
BstF5I GGATG 3 cut(s) 906, 1271, 1526
BstFNI CGCG 1 cut(s) 865
BstH2I RGCGCY 1 cut(s) 1316
BstHHI GCGC 2 cut(s) 865, 1315
BstKTI GATC 3 cut(s) 752, 778, 909
BstMAI GTCTC 2 cut(s) 790, 1166
BstMBI GATC 3 cut(s) 749, 775, 906
BstMWI GCNNNNNNNGC 7 cut(s) 179, 380, 1031, 1257, 1319, 1424, 1564
BstNI CCWGG 2 cut(s) 151, 712
BstSCI CCNGG 3 cut(s) 149, 495, 710
BstSFI CTRYAG 3 cut(s) 967, 1339, 1447
BstUI CGCG 1 cut(s) 865
BstV1I GCAGC 3 cut(s) 367, 805, 1009
BstV2I GAAGAC 2 cut(s) 457, 608
BstXI CCANNNNNNTGG 1 cut(s) 718
BsuRI GGCC 3 cut(s) 461, 1251, 1347
BtsCI GGATG 3 cut(s) 906, 1271, 1526
BtsI GCAGTG 1 cut(s) 1348
BtsIMutI CAGTG 4 cut(s) 759, 909, 966, 1348
Cac8I GCNNGC 2 cut(s) 648, 1299
CaiI CAGNNNCTG 2 cut(s) 1338, 1376
CciI TCATGA 1 cut(s) 486
CfoI GCGC 2 cut(s) 865, 1315
Cfr10I RCCGGY 1 cut(s) 461
Cfr13I GGNCC 2 cut(s) 1181, 1250
CseI GACGC 1 cut(s) 1030
Csp6I GTAC 5 cut(s) 6, 147, 272, 964, 1169
CviAII CATG 3 cut(s) 487, 724, 1357
CviQI GTAC 5 cut(s) 6, 147, 272, 964, 1169
DdeI CTNAG 5 cut(s) 12, 69, 510, 1289, 1369
DpnI GATC 3 cut(s) 751, 777, 908
DpnII GATC 3 cut(s) 749, 775, 906
DraIII CACNNNGTG 1 cut(s) 1564
EaeI YGGCCR 1 cut(s) 459
EciI GGCGGA 1 cut(s) 1410
Ecl136II GAGCTC 1 cut(s) 73
Eco24I GRGCYC 1 cut(s) 75
Eco32I GATATC 1 cut(s) 516
Eco47I GGWCC 1 cut(s) 1181
Eco47III AGCGCT 1 cut(s) 1314
Eco53kI GAGCTC 1 cut(s) 73
Eco57I CTGAAG 1 cut(s) 967
Eco88I CYCGRG 1 cut(s) 701
EcoICRI GAGCTC 1 cut(s) 73
EcoO109I RGGNCCY 1 cut(s) 1181
EcoRI GAATTC 2 cut(s) 657, 921
EcoRII CCWGG 2 cut(s) 149, 710
EcoRV GATATC 1 cut(s) 516
EcoT22I ATGCAT 1 cut(s) 607
EcoT38I GRGCYC 1 cut(s) 75
FaeI CATG 3 cut(s) 490, 727, 1360
FalI AAGNNNNNCTT 4 cut(s) 146, 178, 270, 302
FaqI GGGAC 3 cut(s) 691, 1194, 1442
FatI CATG 3 cut(s) 486, 723, 1356
FbaI TGATCA 1 cut(s) 906
FblI GTMKAC 1 cut(s) 1446
Fnu4HI GCNGC 3 cut(s) 381, 819, 1023
FokI GGATG 3 cut(s) 913, 1258, 1533
FriOI GRGCYC 1 cut(s) 75
Fsp4HI GCNGC 3 cut(s) 381, 819, 1023
FspBI CTAG 2 cut(s) 1172, 1544
GlaI GCGC 2 cut(s) 864, 1314
GluI GCNGC 3 cut(s) 381, 819, 1023
GsaI CCCAGC 2 cut(s) 587, 1264
GsuI CTGGAG 1 cut(s) 655
HaeII RGCGCY 1 cut(s) 1316
HaeIII GGCC 3 cut(s) 461, 1251, 1347
HapII CCGG 2 cut(s) 462, 497
HgaI GACGC 1 cut(s) 1030
HhaI GCGC 2 cut(s) 865, 1315
Hin1I GRCGYC 1 cut(s) 1041
Hin1II CATG 3 cut(s) 490, 727, 1360
Hin6I GCGC 2 cut(s) 863, 1313
HinP1I GCGC 2 cut(s) 863, 1313
HindIII AAGCTT 1 cut(s) 1088
HinfI GANTC 5 cut(s) 37, 453, 704, 877, 1012
HpaII CCGG 2 cut(s) 462, 497
HphI GGTGA 2 cut(s) 510, 1036
Hpy166II GTNNAC 4 cut(s) 366, 869, 964, 1447
Hpy188I TCNGA 8 cut(s) 70, 346, 575, 986, 1127, 1276, 1378, 1506
Hpy188III TCNNGA 3 cut(s) 248, 487, 554
Hpy8I GTNNAC 4 cut(s) 366, 869, 964, 1447
HpyAV CCTTC 7 cut(s) 435, 675, 891, 897, 1171, 1240, 1520
HpyCH4III ACNGT 3 cut(s) 873, 961, 1030
HpyF10VI GCNNNNNNNGC 7 cut(s) 179, 380, 1031, 1257, 1319, 1424, 1564
HpyF3I CTNAG 5 cut(s) 12, 69, 510, 1289, 1369
Hsp92I GRCGYC 1 cut(s) 1041
Hsp92II CATG 3 cut(s) 490, 727, 1360
HspAI GCGC 2 cut(s) 863, 1313
Ksp22I TGATCA 1 cut(s) 906
Kzo9I GATC 3 cut(s) 749, 775, 906
LmnI GCTCC 2 cut(s) 427, 1319
Lsp1109I GCAGC 3 cut(s) 367, 805, 1009
LweI GCATC 5 cut(s) 94, 891, 943, 1316, 1369
MaeI CTAG 2 cut(s) 1172, 1544
MaeIII GTNAC 3 cut(s) 1042, 1267, 1328
MalI GATC 3 cut(s) 751, 777, 908
MboI GATC 3 cut(s) 749, 775, 906
MhlI GDGCHC 3 cut(s) 75, 1303, 1560
MlyI GAGTC 3 cut(s) 447, 713, 886
MmeI TCCRAC 1 cut(s) 1222
Mph1103I ATGCAT 1 cut(s) 607
MroXI GAANNNNTTC 2 cut(s) 282, 1281
MslI CAYNNNNRTG 1 cut(s) 1064
MspI CCGG 2 cut(s) 462, 497
MspR9I CCNGG 3 cut(s) 151, 497, 712
MvaI CCWGG 2 cut(s) 151, 712
MvnI CGCG 1 cut(s) 865
MwoI GCNNNNNNNGC 7 cut(s) 179, 380, 1031, 1257, 1319, 1424, 1564
NciI CCSGG 1 cut(s) 497
NdeII GATC 3 cut(s) 749, 775, 906
NlaIII CATG 3 cut(s) 490, 727, 1360
NlaIV GGNNCC 1 cut(s) 1182
NmuCI GTSAC 1 cut(s) 1042
NsiI ATGCAT 1 cut(s) 607
PagI TCATGA 1 cut(s) 486
PdmI GAANNNNTTC 2 cut(s) 282, 1281
PfeI GAWTC 2 cut(s) 37, 1012
PkrI GCNGC 3 cut(s) 382, 820, 1024
PleI GAGTC 3 cut(s) 447, 712, 885
PpsI GAGTC 3 cut(s) 447, 712, 885
PpuMI RGGWCCY 1 cut(s) 1181
PsiI TTATAA 1 cut(s) 566
Psp124BI GAGCTC 1 cut(s) 75
Psp5II RGGWCCY 1 cut(s) 1181
Psp6I CCWGG 2 cut(s) 149, 710
PspFI CCCAGC 2 cut(s) 583, 1260
PspGI CCWGG 2 cut(s) 149, 710
PspN4I GGNNCC 1 cut(s) 1182
PspPI GGNCC 2 cut(s) 1181, 1250
PspPPI RGGWCCY 1 cut(s) 1181
PstI CTGCAG 1 cut(s) 1343
PstNI CAGNNNCTG 2 cut(s) 1338, 1376
RsaI GTAC 5 cut(s) 7, 148, 273, 965, 1170
RsaNI GTAC 5 cut(s) 6, 147, 272, 964, 1169
RseI CAYNNNNRTG 1 cut(s) 1064
SacI GAGCTC 1 cut(s) 75
SatI GCNGC 3 cut(s) 381, 819, 1023
Sau3AI GATC 3 cut(s) 749, 775, 906
Sau96I GGNCC 2 cut(s) 1181, 1250
SchI GAGTC 3 cut(s) 447, 713, 886
ScrFI CCNGG 3 cut(s) 151, 497, 712
SduI GDGCHC 3 cut(s) 75, 1303, 1560
SfaNI GCATC 5 cut(s) 94, 891, 943, 1316, 1369
SfcI CTRYAG 3 cut(s) 967, 1339, 1447
SinI GGWCC 1 cut(s) 1181
SmiMI CAYNNNNRTG 1 cut(s) 1064
SmlI CTYRAG 1 cut(s) 1302
SmoI CTYRAG 1 cut(s) 1302
SsiI CCGC 2 cut(s) 733, 1395
SspI AATATT 1 cut(s) 65
SspMI CTAG 2 cut(s) 1172, 1544
SstI GAGCTC 1 cut(s) 75
StyD4I CCNGG 3 cut(s) 149, 495, 710
TaaI ACNGT 3 cut(s) 873, 961, 1030
TaqI TCGA 3 cut(s) 311, 1010, 1554
TatI WGTACW 3 cut(s) 271, 963, 1168
TfiI GAWTC 2 cut(s) 37, 1012
TscAI CASTG 4 cut(s) 759, 916, 966, 1348
TseFI GTSAC 1 cut(s) 1042
TseI GCWGC 3 cut(s) 380, 818, 1022
Tsp45I GTSAC 1 cut(s) 1042
TspRI CASTG 4 cut(s) 759, 916, 966, 1348
VpaK11BI GGWCC 1 cut(s) 1181
XapI RAATTY 5 cut(s) 558, 576, 657, 826, 921
XmiI GTMKAC 1 cut(s) 1446
XmnI GAANNNNTTC 2 cut(s) 282, 1281
XspI CTAG 2 cut(s) 1172, 1544
Zsp2I ATGCAT 1 cut(s) 607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.