Rh7CG335000
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
37292823 .. 37295493
2671 bp
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UTR
Exon/CDS
Intron
Rh7CG335000.1

Sequence Viewer

Length: 1575 bp
ATGGGTACTGCTGAGAATGAAACGGGTTTGTCTGGGATTCCATTGGGAATTACCAAGAACAAATATTCTGAGCTCACAAAGGTTGATGATGATTATGATGAAGATGCTTCCCACCATCATCATCAACAAAAAAGGAGTGCAAGTACCAGGAAGTATGTCTTTGCTTGTGCCATCTTTGCCTCCCTCAACTCTGTTCTTCTTGGCTATGATGTAGGTGTGATGAGTGGGGCAATCATATTCATTCACGAAGATTTGAAGATAACCGAAGTACAGGAAGAAGTTCTTGTTGGGATTTTGAGCATTGTTTCGATTTTTGGTAGTTTAGCTGGTGGTAGAACATCAGACATTATAGGTAGAAAGTGGACAATGGCATTAGCTGCTCTTGTCTTTCAAACAGGTGCAGTTGTAATGACACTTGCTCCTTCATTTGAAGTGCTGATGATTGGAAGACTCTTGGCCGGTGTTGGGATTGGGTTTGGTGTCATGATTGCCCCGGTTTATATTGCTGAGATATCACCCACCATTGCCAGAGGCTCACTCACTTCATTTCCTGAAATTTTTATAAATCTCGGAATTTTGCTGGGCTATGTTTCAAACTATGCATTTTCTGGTCTTCCAGCACATATAAACTGGAGGATAATGCTCGCAGTAGGAATTCTGCCTTCAATTTTCATTGGTTTTGCACTTTTCATAATCCCCGAGTCCCCCAGGTGGTTGGTCATGCAGAACCGCATTGACGAGGCAAGATCAGTGCTGATGAAAACAAATGAGGATCAAAGTGAGGTGGAGGAGAGACTGAATGAAATACAAGAGGCTGCTGGAAATTCCAATGCAGACAAGTATGAGGAGAAAAGTGTGGCGCGTGAACTGTTGAGTCCTTCTCCTTCACTTCGTAGGATGCTGATCACTGGTTTTGGAATTCAATGTTTTCAACAGATAACAGGAATAGATGCAACAGTGTACTACAGCCCTGAAATCTTCAGACAAGCTGGTATTGAGGACAAATCGAATCTACTTGCTGCAACTGTTGCTGTGGGCGTCACCAAGACTGCTTTCATATTGGTGGCTATTTTGCTTATTGACAAGCTTGGAAGAAAGCCCTTGCTCTATATCAGCACAATCGGAATGACAATCTGTTTATTCAGTTTGGGAATTAGTCTCTCTGTACTAGGGAAGGGACCTATTGGAATTGCATTTGCCATTTTGTCAGTTTGTGGGAATGTAGCCTTCTTCTCTGTTGGAATTGGCCCTGTTTGCTGGGTTGTAACATCCGAAATCTTTCCTCTAAGGTTGCGTGCTCAAGCATCAGCGCTTGGAGCTGTGGGTAACAGGGTCTGCAGTGGCCTAATTGCCATGTCTTTTCTCTCAGTTTCTGATGCGATTTCATTTGGCGGAACATTCTTCATCTTTTCTGCAATATCAGCTCTTTCTGTTTTGTTTGTCTACAGACTTGTCCCAGAAACTAAAGGAAAGTCATTGGAACAGATTGAGCTTCTTTTTCAGACTGATGAACTTGGATGGGAAGGAGGTCAAGTTGAACTAGGAGATGTCGAGCACCTTGTGCAAAAAGAATGA

Protein Analysis

524

Amino Acids

56.55

Weight (kDa)

5.22

Isoelectric Point (pI)

36.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 56 - 500 9.3e-112 Sugar (and other) transporter
MFS_1 PF07690 62 - 448 4.7e-30 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 563
AccI GTMKAC 1 cut(s) 1443
AccII CGCG 1 cut(s) 862
AciI CCGC 2 cut(s) 730, 1392
AclWI GGATC 1 cut(s) 780
AcoI YGGCCR 1 cut(s) 456
AcsI RAATTY 5 cut(s) 555, 573, 654, 823, 918
AcuI CTGAAG 1 cut(s) 964
AcyI GRCGYC 1 cut(s) 1038
AdeI CACNNNGTG 1 cut(s) 1561
AfaI GTAC 5 cut(s) 7, 145, 270, 962, 1167
AfeI AGCGCT 1 cut(s) 1311
AfiI CCNNNNNNNGG 2 cut(s) 465, 711
AgsI TTSAA 8 cut(s) 256, 392, 431, 594, 666, 923, 932, 1538
AjnI CCWGG 2 cut(s) 146, 707
AjuI GAANNNNNNNTTGG 4 cut(s) 270, 302, 1037, 1069
AluBI AGCT 8 cut(s) 73, 326, 377, 989, 1087, 1319, 1424, 1492
AluI AGCT 8 cut(s) 73, 326, 377, 989, 1087, 1319, 1424, 1492
Alw21I GWGCWC 3 cut(s) 75, 1300, 1557
Alw26I GTCTC 2 cut(s) 787, 1163
AlwI GGATC 1 cut(s) 780
AlwNI CAGNNNCTG 2 cut(s) 1335, 1373
Ama87I CYCGRG 1 cut(s) 698
Aor51HI AGCGCT 1 cut(s) 1311
AoxI GGCC 3 cut(s) 456, 1246, 1342
ApeKI GCWGC 3 cut(s) 377, 815, 1019
ApoI RAATTY 5 cut(s) 555, 573, 654, 823, 918
Asp700I GAANNNNTTC 2 cut(s) 279, 1278
AspLEI GCGC 2 cut(s) 862, 1312
AspS9I GGNCC 2 cut(s) 1178, 1247
AsuC2I CCSGG 1 cut(s) 494
AsuHPI GGTGA 2 cut(s) 507, 1033
AvaI CYCGRG 1 cut(s) 698
AvaII GGWCC 1 cut(s) 1178
BanII GRGCYC 1 cut(s) 75
BbsI GAAGAC 2 cut(s) 454, 605
Bbv12I GWGCWC 3 cut(s) 75, 1300, 1557
BbvI GCAGC 3 cut(s) 364, 802, 1006
BccI CCATC 3 cut(s) 123, 179, 1512
BciT130I CCWGG 2 cut(s) 148, 709
BclI TGATCA 1 cut(s) 903
BcnI CCSGG 1 cut(s) 494
BcoDI GTCTC 2 cut(s) 787, 1163
BfaI CTAG 2 cut(s) 1169, 1541
BfmI CTRYAG 3 cut(s) 964, 1336, 1444
BfoI RGCGCY 1 cut(s) 1313
BisI GCNGC 3 cut(s) 378, 816, 1020
BlsI GCNGC 3 cut(s) 379, 817, 1021
Bme1390I CCNGG 3 cut(s) 148, 494, 709
Bme18I GGWCC 1 cut(s) 1178
BmeT110I CYCGRG 1 cut(s) 698
BmgT120I GGNCC 2 cut(s) 1178, 1247
BmiI GGNNCC 1 cut(s) 1179
BmrFI CCNGG 3 cut(s) 148, 494, 709
BmsI GCATC 5 cut(s) 94, 888, 940, 1313, 1366
BpiI GAAGAC 2 cut(s) 454, 605
BplI GAGNNNNNCTC 4 cut(s) 522, 554, 865, 897
BpmI CTGGAG 1 cut(s) 652
BpuEI CTTGAG 1 cut(s) 1284
BpuMI CCSGG 1 cut(s) 494
BsaBI GATNNNNATC 1 cut(s) 902
BsaHI GRCGYC 1 cut(s) 1038
BsaJI CCNNGG 2 cut(s) 492, 707
BsaXI ACNNNNNCTCC 6 cut(s) 127, 157, 403, 433, 1518, 1548
Bsc4I CCNNNNNNNGG 2 cut(s) 465, 711
Bse118I RCCGGY 1 cut(s) 458
Bse1I ACTGG 2 cut(s) 635, 913
Bse3DI GCAATG 1 cut(s) 522
Bse8I GATNNNNATC 1 cut(s) 902
BseBI CCWGG 2 cut(s) 148, 709
BseDI CCNNGG 2 cut(s) 492, 707
BseGI GGATG 3 cut(s) 903, 1268, 1523
BseJI GATNNNNATC 1 cut(s) 902
BseLI CCNNNNNNNGG 2 cut(s) 465, 711
BseMI GCAATG 1 cut(s) 522
BseMII CTCAG 3 cut(s) 60, 498, 1380
BseNI ACTGG 2 cut(s) 635, 913
BseRI GAGGAG 2 cut(s) 803, 860
BseXI GCAGC 3 cut(s) 364, 802, 1006
BseYI CCCAGC 2 cut(s) 580, 1257
BsgI GTGCAG 1 cut(s) 420
Bsh1236I CGCG 1 cut(s) 862
BshFI GGCC 3 cut(s) 458, 1248, 1344
BsiHKAI GWGCWC 3 cut(s) 75, 1300, 1557
BsiHKCI CYCGRG 1 cut(s) 698
BsiSI CCGG 2 cut(s) 459, 494
BslFI GGGAC 3 cut(s) 688, 1191, 1439
BslI CCNNNNNNNGG 2 cut(s) 465, 711
BsmAI GTCTC 2 cut(s) 787, 1163
BsmFI GGGAC 3 cut(s) 688, 1191, 1439
BsnI GGCC 3 cut(s) 458, 1248, 1344
BsoBI CYCGRG 1 cut(s) 698
Bsp1286I GDGCHC 3 cut(s) 75, 1300, 1557
Bsp143I GATC 3 cut(s) 746, 772, 903
BspACI CCGC 2 cut(s) 730, 1392
BspANI GGCC 3 cut(s) 458, 1248, 1344
BspCNI CTCAG 4 cut(s) 4, 61, 499, 1379
BspFNI CGCG 1 cut(s) 862
BspHI TCATGA 1 cut(s) 483
BspLI GGNNCC 1 cut(s) 1179
BspMAI CTGCAG 1 cut(s) 1340
BspPI GGATC 1 cut(s) 780
BsrDI GCAATG 1 cut(s) 522
BsrFI RCCGGY 1 cut(s) 458
BsrI ACTGG 2 cut(s) 635, 913
BssAI RCCGGY 1 cut(s) 458
BssECI CCNNGG 2 cut(s) 492, 707
BssMI GATC 3 cut(s) 746, 772, 903
BssNI GRCGYC 1 cut(s) 1038
Bst2UI CCWGG 2 cut(s) 148, 709
Bst4CI ACNGT 3 cut(s) 870, 958, 1027
BstACI GRCGYC 1 cut(s) 1038
BstAPI GCANNNNNTGC 3 cut(s) 377, 1028, 1561
BstC8I GCNNGC 2 cut(s) 645, 1296
BstDEI CTNAG 5 cut(s) 12, 69, 507, 1286, 1366
BstF5I GGATG 3 cut(s) 903, 1268, 1523
BstFNI CGCG 1 cut(s) 862
BstH2I RGCGCY 1 cut(s) 1313
BstHHI GCGC 2 cut(s) 862, 1312
BstKTI GATC 3 cut(s) 749, 775, 906
BstMAI GTCTC 2 cut(s) 787, 1163
BstMBI GATC 3 cut(s) 746, 772, 903
BstMWI GCNNNNNNNGC 7 cut(s) 176, 377, 1028, 1254, 1316, 1421, 1561
BstNI CCWGG 2 cut(s) 148, 709
BstSCI CCNGG 3 cut(s) 146, 492, 707
BstSFI CTRYAG 3 cut(s) 964, 1336, 1444
BstUI CGCG 1 cut(s) 862
BstV1I GCAGC 3 cut(s) 364, 802, 1006
BstV2I GAAGAC 2 cut(s) 454, 605
BstXI CCANNNNNNTGG 1 cut(s) 715
BsuRI GGCC 3 cut(s) 458, 1248, 1344
BtsCI GGATG 3 cut(s) 903, 1268, 1523
BtsI GCAGTG 1 cut(s) 1345
BtsIMutI CAGTG 4 cut(s) 756, 906, 963, 1345
Cac8I GCNNGC 2 cut(s) 645, 1296
CaiI CAGNNNCTG 2 cut(s) 1335, 1373
CciI TCATGA 1 cut(s) 483
CfoI GCGC 2 cut(s) 862, 1312
Cfr10I RCCGGY 1 cut(s) 458
Cfr13I GGNCC 2 cut(s) 1178, 1247
CseI GACGC 1 cut(s) 1027
Csp6I GTAC 5 cut(s) 6, 144, 269, 961, 1166
CviAII CATG 3 cut(s) 484, 721, 1354
CviQI GTAC 5 cut(s) 6, 144, 269, 961, 1166
DdeI CTNAG 5 cut(s) 12, 69, 507, 1286, 1366
DpnI GATC 3 cut(s) 748, 774, 905
DpnII GATC 3 cut(s) 746, 772, 903
DraIII CACNNNGTG 1 cut(s) 1561
EaeI YGGCCR 1 cut(s) 456
EciI GGCGGA 1 cut(s) 1407
Ecl136II GAGCTC 1 cut(s) 73
Eco24I GRGCYC 1 cut(s) 75
Eco32I GATATC 1 cut(s) 513
Eco47I GGWCC 1 cut(s) 1178
Eco47III AGCGCT 1 cut(s) 1311
Eco53kI GAGCTC 1 cut(s) 73
Eco57I CTGAAG 1 cut(s) 964
Eco88I CYCGRG 1 cut(s) 698
EcoICRI GAGCTC 1 cut(s) 73
EcoO109I RGGNCCY 1 cut(s) 1178
EcoRI GAATTC 2 cut(s) 654, 918
EcoRII CCWGG 2 cut(s) 146, 707
EcoRV GATATC 1 cut(s) 513
EcoT22I ATGCAT 1 cut(s) 604
EcoT38I GRGCYC 1 cut(s) 75
FaeI CATG 3 cut(s) 487, 724, 1357
FalI AAGNNNNNCTT 4 cut(s) 143, 175, 267, 299
FaqI GGGAC 3 cut(s) 688, 1191, 1439
FatI CATG 3 cut(s) 483, 720, 1353
FbaI TGATCA 1 cut(s) 903
FblI GTMKAC 1 cut(s) 1443
Fnu4HI GCNGC 3 cut(s) 378, 816, 1020
FokI GGATG 3 cut(s) 910, 1255, 1530
FriOI GRGCYC 1 cut(s) 75
Fsp4HI GCNGC 3 cut(s) 378, 816, 1020
FspBI CTAG 2 cut(s) 1169, 1541
GlaI GCGC 2 cut(s) 861, 1311
GluI GCNGC 3 cut(s) 378, 816, 1020
GsaI CCCAGC 2 cut(s) 584, 1261
GsuI CTGGAG 1 cut(s) 652
HaeII RGCGCY 1 cut(s) 1313
HaeIII GGCC 3 cut(s) 458, 1248, 1344
HapII CCGG 2 cut(s) 459, 494
HgaI GACGC 1 cut(s) 1027
HhaI GCGC 2 cut(s) 862, 1312
Hin1I GRCGYC 1 cut(s) 1038
Hin1II CATG 3 cut(s) 487, 724, 1357
Hin6I GCGC 2 cut(s) 860, 1310
HinP1I GCGC 2 cut(s) 860, 1310
HindIII AAGCTT 1 cut(s) 1085
HinfI GANTC 5 cut(s) 37, 450, 701, 874, 1009
HpaII CCGG 2 cut(s) 459, 494
HphI GGTGA 2 cut(s) 507, 1033
Hpy166II GTNNAC 4 cut(s) 363, 866, 961, 1444
Hpy188I TCNGA 8 cut(s) 70, 343, 572, 983, 1124, 1273, 1375, 1503
Hpy188III TCNNGA 3 cut(s) 245, 484, 551
Hpy8I GTNNAC 4 cut(s) 363, 866, 961, 1444
HpyAV CCTTC 7 cut(s) 432, 672, 888, 894, 1168, 1237, 1517
HpyCH4III ACNGT 3 cut(s) 870, 958, 1027
HpyF10VI GCNNNNNNNGC 7 cut(s) 176, 377, 1028, 1254, 1316, 1421, 1561
HpyF3I CTNAG 5 cut(s) 12, 69, 507, 1286, 1366
Hsp92I GRCGYC 1 cut(s) 1038
Hsp92II CATG 3 cut(s) 487, 724, 1357
HspAI GCGC 2 cut(s) 860, 1310
Ksp22I TGATCA 1 cut(s) 903
Kzo9I GATC 3 cut(s) 746, 772, 903
LmnI GCTCC 2 cut(s) 424, 1316
Lsp1109I GCAGC 3 cut(s) 364, 802, 1006
LweI GCATC 5 cut(s) 94, 888, 940, 1313, 1366
MaeI CTAG 2 cut(s) 1169, 1541
MaeIII GTNAC 3 cut(s) 1039, 1264, 1325
MalI GATC 3 cut(s) 748, 774, 905
MboI GATC 3 cut(s) 746, 772, 903
MhlI GDGCHC 3 cut(s) 75, 1300, 1557
MlyI GAGTC 3 cut(s) 444, 710, 883
MmeI TCCRAC 1 cut(s) 1219
Mph1103I ATGCAT 1 cut(s) 604
MroXI GAANNNNTTC 2 cut(s) 279, 1278
MslI CAYNNNNRTG 1 cut(s) 1061
MspI CCGG 2 cut(s) 459, 494
MspR9I CCNGG 3 cut(s) 148, 494, 709
MvaI CCWGG 2 cut(s) 148, 709
MvnI CGCG 1 cut(s) 862
MwoI GCNNNNNNNGC 7 cut(s) 176, 377, 1028, 1254, 1316, 1421, 1561
NciI CCSGG 1 cut(s) 494
NdeII GATC 3 cut(s) 746, 772, 903
NlaIII CATG 3 cut(s) 487, 724, 1357
NlaIV GGNNCC 1 cut(s) 1179
NmuCI GTSAC 1 cut(s) 1039
NsiI ATGCAT 1 cut(s) 604
PagI TCATGA 1 cut(s) 483
PdmI GAANNNNTTC 2 cut(s) 279, 1278
PfeI GAWTC 2 cut(s) 37, 1009
PkrI GCNGC 3 cut(s) 379, 817, 1021
PleI GAGTC 3 cut(s) 444, 709, 882
PpsI GAGTC 3 cut(s) 444, 709, 882
PpuMI RGGWCCY 1 cut(s) 1178
PsiI TTATAA 1 cut(s) 563
Psp124BI GAGCTC 1 cut(s) 75
Psp5II RGGWCCY 1 cut(s) 1178
Psp6I CCWGG 2 cut(s) 146, 707
PspFI CCCAGC 2 cut(s) 580, 1257
PspGI CCWGG 2 cut(s) 146, 707
PspN4I GGNNCC 1 cut(s) 1179
PspPI GGNCC 2 cut(s) 1178, 1247
PspPPI RGGWCCY 1 cut(s) 1178
PstI CTGCAG 1 cut(s) 1340
PstNI CAGNNNCTG 2 cut(s) 1335, 1373
RsaI GTAC 5 cut(s) 7, 145, 270, 962, 1167
RsaNI GTAC 5 cut(s) 6, 144, 269, 961, 1166
RseI CAYNNNNRTG 1 cut(s) 1061
SacI GAGCTC 1 cut(s) 75
SatI GCNGC 3 cut(s) 378, 816, 1020
Sau3AI GATC 3 cut(s) 746, 772, 903
Sau96I GGNCC 2 cut(s) 1178, 1247
SchI GAGTC 3 cut(s) 444, 710, 883
ScrFI CCNGG 3 cut(s) 148, 494, 709
SduI GDGCHC 3 cut(s) 75, 1300, 1557
SfaNI GCATC 5 cut(s) 94, 888, 940, 1313, 1366
SfcI CTRYAG 3 cut(s) 964, 1336, 1444
SinI GGWCC 1 cut(s) 1178
SmiMI CAYNNNNRTG 1 cut(s) 1061
SmlI CTYRAG 1 cut(s) 1299
SmoI CTYRAG 1 cut(s) 1299
SsiI CCGC 2 cut(s) 730, 1392
SspI AATATT 1 cut(s) 65
SspMI CTAG 2 cut(s) 1169, 1541
SstI GAGCTC 1 cut(s) 75
StyD4I CCNGG 3 cut(s) 146, 492, 707
TaaI ACNGT 3 cut(s) 870, 958, 1027
TaqI TCGA 3 cut(s) 308, 1007, 1551
TatI WGTACW 3 cut(s) 268, 960, 1165
TfiI GAWTC 2 cut(s) 37, 1009
TscAI CASTG 4 cut(s) 756, 913, 963, 1345
TseFI GTSAC 1 cut(s) 1039
TseI GCWGC 3 cut(s) 377, 815, 1019
Tsp45I GTSAC 1 cut(s) 1039
TspRI CASTG 4 cut(s) 756, 913, 963, 1345
VpaK11BI GGWCC 1 cut(s) 1178
XapI RAATTY 5 cut(s) 555, 573, 654, 823, 918
XmiI GTMKAC 1 cut(s) 1443
XmnI GAANNNNTTC 2 cut(s) 279, 1278
XspI CTAG 2 cut(s) 1169, 1541
Zsp2I ATGCAT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.