MD10G1321400.v1.1
MYB Family

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
40329341 .. 40336255
6915 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1321400.v1.1.491

Sequence Viewer

Length: 4242 bp
ATGTCTTCGTCTCCTCGCGAAAAGCCTTCTCCTGCTACCGAGAGCTTGAGTGAGCAGCATGAGAGTGTATTGAGACTTGAGGAGGATGAGGGTGAAGATGAGGATGAAGAAGAAGATGTAGATTTCAATCCTTTTTTAAAAGGAACTCTTTCGCCAGAAGCTTCTTCTAGTCTGAGCTCTGATGTAGAAGTTTTAGATGGTGAAGTTGTTGACAGCAGCAGAAACACTATTGAAACTGCCAGGATTAATTCGTTGATCGTGGCTTGCGAGGCGCAAAAGTGTCCTGTTGGGGACCAAGAGCATGGGGAGGAAGAAACCGTGATGCAAACTACTGTTTCTCCTGACGGTGCATCTGCAAATGAGTTTGAAAAAACTGCCAGAAATTCTAACAGTGAAGCTGTTCAAGAAAAGGATGATGTCTCAAGCAGTGAAACTGATGTTAATGATGCTGTAGTAGGAGAGTTGAGTAACACAGAAGACGTCCCAAAGCCTACTGTGGACTTAGATGATGAGGATGAAGATGCTATCTGTAAACGCACCAGGGCCCGCTATTCATTAGCAAGTTTCACACTTGATGAACTCGAGACTTTTCTTCAAGAAACAGATGATGAGGACGACCTCCAAAATGTTAACGATGAAGAAGAATACAGGAAATTCCTCACTGCTGTTTTACAGGGTGAAGGTGACGAGCAGTCAACTAAAGAAAATGAAAATGCTGATGACGAAGATGAGGATAATGATGCAGACTTTGAGATAGAACTTGAAGAGTTACTGGAGAGTGACGGGGATGAGAATACTAGGGACAAAAGTGTAGATGAGAATGGGGAAGCTGGAAGACGACCAAAGACTAGGCAGAATAAGTGTCATAAAGAACCTGCCCAGTGTAAGAAGAAGAATTTAGGACAGACAAAAAGGCCATTGCGCCCCCTTCTACCAGTTTTGCCAAAGGGACCAATGTCCTGTTTCTCTAATCAGGCCGGCAGAACTTTAATGCGCGGAACAGCTTCAAGTTGTTTGTCTTCCACAGTATCAGAACGTTCTATAAATGGATTCACTGCCCACCAGATTGGCCAGTTGCACTGCTTGATCCATGAACATGTGCAGCTACTTATTCAAGTATTTTCTCTGTGTGCCCTTGATTACTCTCGGCAACATATTGCCTCCCAGGTTAAAAAATTGATCTCTGAGATGCTCCAGAAGCGCGACGAAGTATTGATATGGAAAAATGTACCGTATCCTACTGTTTGCTTTTTCCCATCAGTACCAACTGAATTCCCTAATTCCTACACGACACAAAGTTCCTTAGCATCATCCCTCACATTTGATGCACTTAGAGAGTGTTCCTTGAATAATCATATGGCAGTTTCCCCAAATATTTCTCCTTCCAATGGTAGACGTGAATGTGTTCCTAATGGGCAGGTGGGCATTTCTCAGAATATTGGGGGTTCTTTCTGGGTGCCCTCTGTAAGTGGTCCTGTGCTATCTGTCTTGGATGTAGCTCCACTTAGTTTAGTTGGAAGATACATGGATGAAGTCAATACAGCTGTTCAGGAAAATCGACGGTGTTTCGTGGAAACTAGTTCCGATACTCGCCTCGAAAAGGAGCCTTTGTTTCCCTTTTCTAACTTTCAATTAGGTGCTCAGGCCAATTGCGAATCTGTAAGTGGAACTGGTTCCTCAGCTTCCAATGTGGCTCCATCTTCATCTAGTCAACGACCACCCAAGAAGTCACTGGCTGCTACCATTGTTGAAAGCACCAAGAAGCAATCACTTGCTTTAGTTCCAAAGGACATATCAAAGTTAGCCCAGGGGTTTTTTCCTTTGTTCAATCCAGCATTATTTCCCTATAAACCACCCACAGGAGCAGTCGCAAACCGGATTCTTTTCACTGATGCAGAAGACGAATTATTAGCATTGGGGATGATGGAACATAATACGGATTGGAAGGCAATTCAACAACGCTTTCTTCCTTGCAAAACTAAGCACCAGATTTTTGTTAGGCAGAAAAACCGCTGCTCATCAAAAGCACCAGAAAATCCCATAAAGGCAGTTCGGAGGATGAAAAACTCACCTTTGACTGCGGAAGAGATAGCATGCATTCAGGAGGGACTTAAGGCTTATAAATATGATTGGTTGTCCATATGGAAATTCATTGTCCCACATAGAGATCCATCCTTGTTACCTCGGCAGTGGCGTATTGCTATTGGGACTCAGAAGTCATATAAGGTTGATGAGTCAAAAAAGGAGAAGAGACGATTATATGAATCAAAAAGAAGGAAGGAAAAGAATGCAGATTTGACAAGTTGGCAAAATTCATCCGAGAAAGAGGACTGCCAAGCTGAAAAGTCTGGTGGAGAGAACAGTGCAGATGGTTTGACCGACAATAATGCAGGTGAAACTTATGTTCATGAGGCCTTTTTAGCAGATTGGAGACCGGGTACTTCCTGTGTAGAAAGAAACCCTCATAGTGGTACCCTATCCCAAGGTGCCATCCATGAATGGGTAAATGTTTTTGGGCAGAAGGAAGCTCCTCAAACCCAGACTGTGTCACAGTATCCGCATGGTCAATCTCAAATCACTGGTGTTAGACATTTTACATCCAGTACCACACCAGCGAATCATTCTGTTTCTCAACTCTATTATCGGCCGTATCGAGCTCGTAGAACGAATGGTGCACAACTAGTTAAGCTAGCACCGCAATTGCCTCCTGTGAATCTTCCACCGTCTGTTCGTGTAGTCTCACAATCTGCCTTCAGAGGTTCTTTACGTGGGGCATCTTCCACAGTTTCTGCTTCTGGAGGTGGTAGTGGTGCTGCTGCAACACACAGTCTTTTTTCTCAACCTTCTAAAGCTGGAAGGTTTGGGACCTCTGATGCCATAACAGCTTCACATGCTAAAAGTAGTTCTCTGAAAGACACTGTTTCAACGTTGTGTCCAGAAGATTCTAGAATTATCCAGGATAAATGTGTAGAGGAAGGAAGAGATGTTGATTCTGATCTTCAGATGCATCCTCTGCTGTTCCAGGCCCCTGAAGATGGACGTCTGCCCTATTTCCCGTTGAACTGCAGAAACAGCAATTCCAGTACTTTCAGTTTTCATTCAGCAAATCAGCCTCAGCTACATTTAAGCCTTTTTCATAATCCTCATCAAGGAAACCATGTTGATGGTTTTGACAAGTCACTGAAGACACCCAACTCAACATCTCGTGCCATTGATTTCCATCCACTTATGCAAAGAACTGACTGTGTAAGTAGTGCCACAGTAACAACATACTCAACCGTACCTCTATCTGTCGGTTCAGGAGGAAACCATTCTCAAGATCAATATCCTTCCGATACTGGTCGACTTCATTTGCCGGTCAATGCTGATTCACAGTCTATGGGCACTAATGAGAAAGCTAATGAACTGGACTTGGAGATCCACCTAAGTTCTACATCCAAAAAGGAAAAACCTTCAAAAAGGAGAGATGTCGCTGCGAATAATTCCATTAGATCTAGAACAACGGCACCAGAGATGATAACTCAATGTGCTAATAGTCCATTGCTTCGGCATGCCGAAAATTCTTCAGCAAATGGCAGTGAACTTGTTATACCAAGTAATGATATCAGCAGGTACAGTATAGATGATATAGGTGACCAGTCTCAACATGATATTCAGATGGAACAGGAAGAGTTGAGCGACTCTGATGAAGAAAATGAAGAAAACGAAGAAAATGTTGAGTTTGAGTGTGAGGAGATGACTGATTCTGAAGGAGAGGGGGGATCGGCATGTGAAGAAGTTGCTGAGATGCAAAATAAGGATGTTCCAACGCATGCGATGAAAAGACCTGCAACAACAGATCCTGATGGCAAGGAGTGTGAGCCAAATGCCACTTATCATCCTCAGGACAATATTCACAGAATTCCTAACTTGGACGATGCCAGTAATTCTTCCTGGCTAAGTTTGGATTCGTGTGCACCAGATCGCCCTCCGCACATGATGTCTAAGTACGACGAAAGTACAATGGACAGCAGTTTTTCTGCCAATGACTCGCAGTCATCTCGTCCTCTTCGCTCTTGTAAGAAAGCGAAACTAAGCACAAGGGAAGGTGCAACACCGAAACAAGCTGTGGACATGACGCACCAACTGAGCCTGGGTCCTCCATCAAATCCGATGGCAAGGAAACCCAGGAAGCGTGTATCGAGAACCAGTACATGTTTGAACATAGGATTGACCGTAGAAAACTCCGGCAGTGATGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1414

Amino Acids

155.67

Weight (kDa)

5.06

Isoelectric Point (pI)

55.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2121
AarI CACCTGC 2 cut(s) 1408, 2381
AasI GACNNNNNNGTC 1 cut(s) 2215
AatII GACGTC 2 cut(s) 483, 3043
Acc36I ACCTGC 5 cut(s) 883, 1408, 2381, 3600, 3835
Acc65I GGTACC 1 cut(s) 2471
AccB1I GGYRCC 4 cut(s) 1456, 2471, 2486, 3505
AccI GTMKAC 2 cut(s) 1393, 3343
AccII CGCG 3 cut(s) 18, 996, 1203
AciI CCGC 7 cut(s) 547, 996, 2011, 2081, 2558, 2696, 3971
AclI AACGTT 2 cut(s) 1036, 2927
AclWI GGATC 5 cut(s) 1081, 2162, 3412, 3769, 3833
AcoI YGGCCR 2 cut(s) 1069, 2645
AcsI RAATTY 8 cut(s) 382, 653, 895, 1271, 2147, 2311, 3559, 3900
AcuI CTGAAG 6 cut(s) 2737, 2984, 3051, 3203, 3549, 3768
AcyI GRCGYC 2 cut(s) 480, 3040
AfiI CCNNNNNNNGG 7 cut(s) 1388, 1600, 1859, 2468, 2500, 3035, 3149
AflII CTTAAG 1 cut(s) 2111
AflIII ACRYGT 2 cut(s) 1096, 4193
AhdI GACNNNNNGTC 2 cut(s) 691, 4033
AhlI ACTAGT 2 cut(s) 1577, 2680
AjiI CACGTC 1 cut(s) 1397
AjnI CCWGG 9 cut(s) 239, 539, 1164, 1806, 2955, 3021, 3932, 4131, 4166
Alw21I GWGCWC 5 cut(s) 179, 1642, 2659, 2677, 3958
Alw26I GTCTC 8 cut(s) 15, 67, 424, 578, 2245, 2425, 2743, 3645
Alw44I GTGCAC 2 cut(s) 2673, 3954
AlwI GGATC 5 cut(s) 1081, 2162, 3412, 3769, 3833
AlwNI CAGNNNCTG 2 cut(s) 2789, 3842
Ama87I CYCGRG 1 cut(s) 581
AoxI GGCC 8 cut(s) 543, 914, 975, 1069, 1644, 2412, 2645, 3024
ApaI GGGCCC 1 cut(s) 547
ApaLI GTGCAC 2 cut(s) 2673, 3954
ApeKI GCWGC 8 cut(s) 55, 216, 1102, 1736, 2013, 2813, 2816, 3473
ApoI RAATTY 8 cut(s) 382, 653, 895, 1271, 2147, 2311, 3559, 3900
AseI ATTAAT 1 cut(s) 246
Asp700I GAANNNNTTC 6 cut(s) 148, 399, 1003, 1404, 1672, 3310
Asp718I GGTACC 1 cut(s) 2471
AspLEI GCGC 4 cut(s) 274, 924, 996, 1203
AspS9I GGNCC 8 cut(s) 292, 543, 544, 950, 1472, 2865, 3025, 4136
AsuC2I CCSGG 1 cut(s) 2436
AsuHPI GGTGA 7 cut(s) 104, 212, 689, 695, 2061, 2405, 3644
AsuNHI GCTAGC 1 cut(s) 2689
AvaI CYCGRG 1 cut(s) 581
AvaII GGWCC 5 cut(s) 292, 950, 1472, 2865, 4136
AxyI CCTNAGG 1 cut(s) 3882
BaeGI GKGCMC 6 cut(s) 547, 1135, 1461, 2677, 3386, 3958
BalI TGGCCA 1 cut(s) 1071
BanI GGYRCC 4 cut(s) 1456, 2471, 2486, 3505
BanII GRGCYC 3 cut(s) 179, 547, 2659
BauI CACGAG 1 cut(s) 3204
BbsI GAAGAC 5 cut(s) 483, 841, 1011, 1905, 3191
Bbv12I GWGCWC 5 cut(s) 179, 1642, 2659, 2677, 3958
BbvCI CCTCAGC 2 cut(s) 1678, 3114
BbvI GCAGC 8 cut(s) 67, 228, 1114, 1723, 2000, 2800, 2803, 3460
BceAI ACGGC 2 cut(s) 2632, 3519
BcgI CGANNNNNNTGC 4 cut(s) 2369, 2403, 4022, 4056
BciT130I CCWGG 9 cut(s) 241, 541, 1166, 1808, 2957, 3023, 3934, 4133, 4168
BciVI GTATCC 2 cut(s) 1245, 2565
BcnI CCSGG 1 cut(s) 2436
BcoDI GTCTC 8 cut(s) 15, 67, 424, 578, 2245, 2425, 2743, 3645
BcuI ACTAGT 2 cut(s) 1577, 2680
BfaI CTAG 9 cut(s) 168, 798, 849, 1578, 1707, 2681, 2690, 2946, 3495
BfmI CTRYAG 2 cut(s) 450, 3064
BfrI CTTAAG 1 cut(s) 2111
BfuAI ACCTGC 5 cut(s) 883, 1408, 2381, 3600, 3835
BfuI GTATCC 2 cut(s) 1245, 2565
BglII AGATCT 1 cut(s) 3491
BisI GCNGC 8 cut(s) 56, 217, 1103, 1737, 2014, 2814, 2817, 3474
BlsI GCNGC 8 cut(s) 57, 218, 1104, 1738, 2015, 2815, 2818, 3475
BmcAI AGTACT 1 cut(s) 3085
Bme18I GGWCC 5 cut(s) 292, 950, 1472, 2865, 4136
BmeRI GACNNNNNGTC 2 cut(s) 691, 4033
BmeT110I CYCGRG 1 cut(s) 581
BmgBI CACGTC 1 cut(s) 1397
BmgT120I GGNCC 8 cut(s) 292, 543, 544, 950, 1472, 2865, 3025, 4136
BmrI ACTGGG 1 cut(s) 874
BmtI GCTAGC 1 cut(s) 2693
BmuI ACTGGG 1 cut(s) 874
BoxI GACNNNNGTC 1 cut(s) 955
BpiI GAAGAC 5 cut(s) 483, 841, 1011, 1905, 3191
BpmI CTGGAG 3 cut(s) 794, 1178, 2817
Bpu10I CCTNAGC 4 cut(s) 1303, 1641, 1678, 3114
BpuEI CTTGAG 4 cut(s) 67, 98, 406, 3300
BpuMI CCSGG 1 cut(s) 2436
BsaAI YACGTR 1 cut(s) 2768
BsaBI GATNNNNATC 4 cut(s) 126, 2994, 3219, 3324
BsaHI GRCGYC 2 cut(s) 480, 3040
BsaI GGTCTC 1 cut(s) 2425
BsaJI CCNNGG 8 cut(s) 540, 1164, 1806, 1807, 2183, 2482, 4132, 4166
BsaWI WCCGGW 1 cut(s) 1875
BsaXI ACNNNNNCTCC 6 cut(s) 322, 352, 1595, 1625, 2422, 2452
Bsc4I CCNNNNNNNGG 7 cut(s) 1388, 1600, 1859, 2468, 2500, 3035, 3149
Bse118I RCCGGY 2 cut(s) 977, 3355
Bse21I CCTNAGG 1 cut(s) 3882
Bse3DI GCAATG 2 cut(s) 917, 3539
Bse8I GATNNNNATC 4 cut(s) 126, 2994, 3219, 3324
BseBI CCWGG 9 cut(s) 241, 541, 1166, 1808, 2957, 3023, 3934, 4133, 4168
BseDI CCNNGG 8 cut(s) 540, 1164, 1806, 1807, 2183, 2482, 4132, 4166
BseJI GATNNNNATC 4 cut(s) 126, 2994, 3219, 3324
BseLI CCNNNNNNNGG 7 cut(s) 1388, 1600, 1859, 2468, 2500, 3035, 3149
BseMI GCAATG 2 cut(s) 917, 3539
BseRI GAGGAG 3 cut(s) 95, 2520, 3746
BseSI GKGCMC 6 cut(s) 547, 1135, 1461, 2677, 3386, 3958
BseX3I CGGCCG 1 cut(s) 2645
BseXI GCAGC 8 cut(s) 67, 228, 1114, 1723, 2000, 2800, 2803, 3460
BsgI GTGCAG 2 cut(s) 1121, 2385
Bsh1236I CGCG 3 cut(s) 18, 996, 1203
Bsh1285I CGRYCG 1 cut(s) 2648
BshFI GGCC 8 cut(s) 545, 916, 977, 1071, 1646, 2414, 2647, 3026
BshNI GGYRCC 4 cut(s) 1456, 2471, 2486, 3505
BsiEI CGRYCG 1 cut(s) 2648
BsiHKAI GWGCWC 5 cut(s) 179, 1642, 2659, 2677, 3958
BsiHKCI CYCGRG 1 cut(s) 581
BsiSI CCGG 5 cut(s) 978, 1876, 2435, 3356, 4227
BslFI GGGAC 8 cut(s) 305, 467, 815, 963, 2121, 2141, 2221, 2878
BslI CCNNNNNNNGG 7 cut(s) 1388, 1600, 1859, 2468, 2500, 3035, 3149
BsmAI GTCTC 8 cut(s) 15, 67, 424, 578, 2245, 2425, 2743, 3645
BsmBI CGTCTC 2 cut(s) 15, 2245
BsmFI GGGAC 8 cut(s) 305, 467, 815, 963, 2121, 2141, 2221, 2878
BsmI GAATGC 2 cut(s) 2097, 2293
BsnI GGCC 8 cut(s) 545, 916, 977, 1071, 1646, 2414, 2647, 3026
Bso31I GGTCTC 1 cut(s) 2425
BsoBI CYCGRG 1 cut(s) 581
Bsp120I GGGCCC 1 cut(s) 543
Bsp1286I GDGCHC 9 cut(s) 179, 547, 1135, 1461, 1642, 2659, 2677, 3386, 3958
Bsp68I TCGCGA 1 cut(s) 18
BspACI CCGC 7 cut(s) 547, 996, 2011, 2081, 2558, 2696, 3971
BspANI GGCC 8 cut(s) 545, 916, 977, 1071, 1646, 2414, 2647, 3026
BspFNI CGCG 3 cut(s) 18, 996, 1203
BspHI TCATGA 1 cut(s) 2407
BspMAI CTGCAG 1 cut(s) 3068
BspMI ACCTGC 5 cut(s) 883, 1408, 2381, 3600, 3835
BspOI GCTAGC 1 cut(s) 2693
BspPI GGATC 5 cut(s) 1081, 2162, 3412, 3769, 3833
BspT107I GGYRCC 4 cut(s) 1456, 2471, 2486, 3505
BspTI CTTAAG 1 cut(s) 2111
BspTNI GGTCTC 1 cut(s) 2425
BsrDI GCAATG 2 cut(s) 917, 3539
BsrFI RCCGGY 2 cut(s) 977, 3355
BssAI RCCGGY 2 cut(s) 977, 3355
BssECI CCNNGG 8 cut(s) 540, 1164, 1806, 1807, 2183, 2482, 4132, 4166
BssNI GRCGYC 2 cut(s) 480, 3040
BssSI CACGAG 1 cut(s) 3204
BssT1I CCWWGG 1 cut(s) 2482
Bst2BI CACGAG 1 cut(s) 3204
Bst2UI CCWGG 9 cut(s) 241, 541, 1166, 1808, 2957, 3023, 3934, 4133, 4168
Bst6I CTCTTC 6 cut(s) 759, 2079, 2243, 2974, 3663, 4053
BstACI GRCGYC 2 cut(s) 480, 3040
BstAFI CTTAAG 1 cut(s) 2111
BstAPI GCANNNNNTGC 1 cut(s) 3013
BstBAI YACGTR 1 cut(s) 2768
BstC8I GCNNGC 7 cut(s) 265, 547, 979, 2095, 2691, 3552, 3813
BstEII GGTNACC 1 cut(s) 3632
BstENI CCTNNNNNAGG 2 cut(s) 1598, 3147
BstFNI CGCG 3 cut(s) 18, 996, 1203
BstHHI GCGC 4 cut(s) 274, 924, 996, 1203
BstMAI GTCTC 8 cut(s) 15, 67, 424, 578, 2245, 2425, 2743, 3645
BstMCI CGRYCG 1 cut(s) 2648
BstMWI GCNNNNNNNGC 9 cut(s) 269, 1198, 2420, 2695, 2882, 2891, 3013, 3072, 4236
BstNI CCWGG 9 cut(s) 241, 541, 1166, 1808, 2957, 3023, 3934, 4133, 4168
BstNSI RCATGY 7 cut(s) 1100, 2097, 2894, 3554, 3771, 3815, 4197
BstPAI GACNNNNGTC 1 cut(s) 955
BstPI GGTNACC 1 cut(s) 3632
BstSFI CTRYAG 2 cut(s) 450, 3064
BstSLI GKGCMC 6 cut(s) 547, 1135, 1461, 2677, 3386, 3958
BstUI CGCG 3 cut(s) 18, 996, 1203
BstV1I GCAGC 8 cut(s) 67, 228, 1114, 1723, 2000, 2800, 2803, 3460
BstV2I GAAGAC 5 cut(s) 483, 841, 1011, 1905, 3191
BstX2I RGATCY 4 cut(s) 2167, 3417, 3491, 3838
BstXI CCANNNNNNTGG 3 cut(s) 302, 1067, 3164
BstYI RGATCY 4 cut(s) 2167, 3417, 3491, 3838
BstZI CGGCCG 1 cut(s) 2645
Bsu36I CCTNAGG 1 cut(s) 3882
BsuI GTATCC 2 cut(s) 1245, 2565
BsuRI GGCC 8 cut(s) 545, 916, 977, 1071, 1646, 2414, 2647, 3026
BtgZI GCGATG 1 cut(s) 3830
BtrI CACGTC 1 cut(s) 1397
BtsI GCAGTG 7 cut(s) 433, 660, 1053, 1078, 2195, 3583, 4237
BtuMI TCGCGA 1 cut(s) 18
BveI ACCTGC 5 cut(s) 883, 1408, 2381, 3600, 3835
Cac8I GCNNGC 7 cut(s) 265, 547, 979, 2095, 2691, 3552, 3813
CaiI CAGNNNCTG 2 cut(s) 2789, 3842
CciI TCATGA 1 cut(s) 2407
CfoI GCGC 4 cut(s) 274, 924, 996, 1203
Cfr10I RCCGGY 2 cut(s) 977, 3355
Cfr13I GGNCC 8 cut(s) 292, 543, 544, 950, 1472, 2865, 3025, 4136
CseI GACGC 1 cut(s) 4126
DraI TTTAAA 1 cut(s) 138
DrdI GACNNNNNNGTC 1 cut(s) 2215
DriI GACNNNNNGTC 2 cut(s) 691, 4033
DseDI GACNNNNNNGTC 1 cut(s) 2215
EaeI YGGCCR 2 cut(s) 1069, 2645
EagI CGGCCG 1 cut(s) 2645
Eam1104I CTCTTC 6 cut(s) 759, 2079, 2243, 2974, 3663, 4053
Eam1105I GACNNNNNGTC 2 cut(s) 691, 4033
EarI CTCTTC 6 cut(s) 759, 2079, 2243, 2974, 3663, 4053
Ecl136II GAGCTC 2 cut(s) 177, 2657
EclXI CGGCCG 1 cut(s) 2645
Eco130I CCWWGG 1 cut(s) 2482
Eco147I AGGCCT 1 cut(s) 2414
Eco24I GRGCYC 3 cut(s) 179, 547, 2659
Eco31I GGTCTC 1 cut(s) 2425
Eco32I GATATC 1 cut(s) 3604
Eco47I GGWCC 5 cut(s) 292, 950, 1472, 2865, 4136
Eco52I CGGCCG 1 cut(s) 2645
Eco53kI GAGCTC 2 cut(s) 177, 2657
Eco57I CTGAAG 6 cut(s) 2737, 2984, 3051, 3203, 3549, 3768
Eco81I CCTNAGG 1 cut(s) 3882
Eco88I CYCGRG 1 cut(s) 581
Eco91I GGTNACC 1 cut(s) 3632
EcoICRI GAGCTC 2 cut(s) 177, 2657
EcoNI CCTNNNNNAGG 2 cut(s) 1598, 3147
EcoO109I RGGNCCY 4 cut(s) 543, 2865, 3025, 4136
EcoO65I GGTNACC 1 cut(s) 3632
EcoRI GAATTC 2 cut(s) 1271, 3900
EcoRII CCWGG 9 cut(s) 239, 539, 1164, 1806, 2955, 3021, 3932, 4131, 4166
EcoRV GATATC 1 cut(s) 3604
EcoT14I CCWWGG 1 cut(s) 2482
EcoT22I ATGCAT 2 cut(s) 2099, 3009
EcoT38I GRGCYC 3 cut(s) 179, 547, 2659
ErhI CCWWGG 1 cut(s) 2482
Esp3I CGTCTC 2 cut(s) 15, 2245
FalI AAGNNNNNCTT 2 cut(s) 132, 164
FaqI GGGAC 8 cut(s) 305, 467, 815, 963, 2121, 2141, 2221, 2878
FauI CCCGC 1 cut(s) 554
FauNDI CATATG 2 cut(s) 1356, 2141
FblI GTMKAC 2 cut(s) 1393, 3343
Fnu4HI GCNGC 8 cut(s) 56, 217, 1103, 1737, 2014, 2814, 2817, 3474
FriOI GRGCYC 3 cut(s) 179, 547, 2659
Fsp4HI GCNGC 8 cut(s) 56, 217, 1103, 1737, 2014, 2814, 2817, 3474
FspBI CTAG 9 cut(s) 168, 798, 849, 1578, 1707, 2681, 2690, 2946, 3495
GlaI GCGC 4 cut(s) 273, 923, 995, 1202
GluI GCNGC 8 cut(s) 56, 217, 1103, 1737, 2014, 2814, 2817, 3474
GsuI CTGGAG 3 cut(s) 794, 1178, 2817
HaeIII GGCC 8 cut(s) 545, 916, 977, 1071, 1646, 2414, 2647, 3026
HapII CCGG 5 cut(s) 978, 1876, 2435, 3356, 4227
HgaI GACGC 1 cut(s) 4126
HhaI GCGC 4 cut(s) 274, 924, 996, 1203
Hin1I GRCGYC 2 cut(s) 480, 3040
Hin6I GCGC 4 cut(s) 272, 922, 994, 1201
HinP1I GCGC 4 cut(s) 272, 922, 994, 1201
HincII GTYRAC 5 cut(s) 211, 631, 696, 1712, 3344
HindII GTYRAC 5 cut(s) 211, 631, 696, 1712, 3344
HindIII AAGCTT 1 cut(s) 159
HpaI GTTAAC 1 cut(s) 631
HpaII CCGG 5 cut(s) 978, 1876, 2435, 3356, 4227
HphI GGTGA 7 cut(s) 104, 212, 689, 695, 2061, 2405, 3644
Hpy99I CGWCG 3 cut(s) 1208, 1563, 3995
HpyCH4IV ACGT 6 cut(s) 480, 1036, 1396, 2767, 2927, 3040
HpyF10VI GCNNNNNNNGC 9 cut(s) 269, 1198, 2420, 2695, 2882, 2891, 3013, 3072, 4236
HpySE526I ACGT 6 cut(s) 480, 1036, 1396, 2767, 2927, 3040
Hsp92I GRCGYC 2 cut(s) 480, 3040
HspAI GCGC 4 cut(s) 272, 922, 994, 1201
KpnI GGTACC 1 cut(s) 2475
KroI GCCGGC 1 cut(s) 977
KroNI GCCGGC 1 cut(s) 979
KspAI GTTAAC 1 cut(s) 631
LmnI GCTCC 6 cut(s) 1197, 1504, 1603, 1699, 1862, 2533
Lsp1109I GCAGC 8 cut(s) 67, 228, 1114, 1723, 2000, 2800, 2803, 3460
MaeI CTAG 9 cut(s) 168, 798, 849, 1578, 1707, 2681, 2690, 2946, 3495
MaeII ACGT 6 cut(s) 480, 1036, 1396, 2767, 2927, 3040
MfeI CAATTG 2 cut(s) 1648, 2699
MflI RGATCY 4 cut(s) 2167, 3417, 3491, 3838
MhlI GDGCHC 9 cut(s) 179, 547, 1135, 1461, 1642, 2659, 2677, 3386, 3958
MlsI TGGCCA 1 cut(s) 1071
MluNI TGGCCA 1 cut(s) 1071
MlyI GAGTC 4 cut(s) 2203, 2243, 3674, 4022
MmeI TCCRAC 2 cut(s) 1495, 3830
Mox20I TGGCCA 1 cut(s) 1071
Mph1103I ATGCAT 2 cut(s) 2099, 3009
MroNI GCCGGC 1 cut(s) 977
MroXI GAANNNNTTC 6 cut(s) 148, 399, 1003, 1404, 1672, 3310
MscI TGGCCA 1 cut(s) 1071
MseI TTAA 9 cut(s) 137, 246, 441, 630, 989, 1170, 2112, 2685, 3125
MslI CAYNNNNRTG 3 cut(s) 63, 1095, 3162
Msp20I TGGCCA 1 cut(s) 1071
MspA1I CMGCKG 2 cut(s) 1544, 2013
MspCI CTTAAG 1 cut(s) 2111
MspI CCGG 5 cut(s) 978, 1876, 2435, 3356, 4227
MunI CAATTG 2 cut(s) 1648, 2699
Mva1269I GAATGC 2 cut(s) 2097, 2293
MvaI CCWGG 9 cut(s) 241, 541, 1166, 1808, 2957, 3023, 3934, 4133, 4168
MvnI CGCG 3 cut(s) 18, 996, 1203
MwoI GCNNNNNNNGC 9 cut(s) 269, 1198, 2420, 2695, 2882, 2891, 3013, 3072, 4236
NaeI GCCGGC 1 cut(s) 979
NciI CCSGG 1 cut(s) 2436
NdeI CATATG 2 cut(s) 1356, 2141
NgoMIV GCCGGC 1 cut(s) 977
NheI GCTAGC 1 cut(s) 2689
NmeAIII GCCGAG 2 cut(s) 1126, 2164
NmuCI GTSAC 6 cut(s) 683, 779, 1728, 2547, 3177, 3632
NruI TCGCGA 1 cut(s) 18
NsiI ATGCAT 2 cut(s) 2099, 3009
NspI RCATGY 7 cut(s) 1100, 2097, 2894, 3554, 3771, 3815, 4197
PaeI GCATGC 3 cut(s) 2097, 3554, 3815
PaeR7I CTCGAG 1 cut(s) 581
PagI TCATGA 1 cut(s) 2407
PaqCI CACCTGC 2 cut(s) 1408, 2381
PasI CCCWGGG 1 cut(s) 1807
PceI AGGCCT 1 cut(s) 2414
PciI ACATGT 2 cut(s) 1096, 4193
PcsI WCGNNNNNNNCGW 3 cut(s) 264, 2191, 2650
PctI GAATGC 2 cut(s) 2097, 2293
PdiI GCCGGC 1 cut(s) 979
PdmI GAANNNNTTC 6 cut(s) 148, 399, 1003, 1404, 1672, 3310
PflFI GACNNNGTC 1 cut(s) 2545
PfoI TCCNGGA 1 cut(s) 2955
PkrI GCNGC 8 cut(s) 57, 218, 1104, 1738, 2015, 2815, 2818, 3475
PleI GAGTC 4 cut(s) 2203, 2242, 3674, 4022
PpsI GAGTC 4 cut(s) 2203, 2242, 3674, 4022
Ppu21I YACGTR 1 cut(s) 2768
PpuMI RGGWCCY 2 cut(s) 2865, 4136
PscI ACATGT 2 cut(s) 1096, 4193
PshAI GACNNNNGTC 1 cut(s) 955
PshBI ATTAAT 1 cut(s) 246
PsiI TTATAA 1 cut(s) 2121
Psp124BI GAGCTC 2 cut(s) 179, 2659
Psp1406I AACGTT 2 cut(s) 1036, 2927
Psp5II RGGWCCY 2 cut(s) 2865, 4136
Psp6I CCWGG 9 cut(s) 239, 539, 1164, 1806, 2955, 3021, 3932, 4131, 4166
PspEI GGTNACC 1 cut(s) 3632
PspGI CCWGG 9 cut(s) 239, 539, 1164, 1806, 2955, 3021, 3932, 4131, 4166
PspOMI GGGCCC 1 cut(s) 543
PspPI GGNCC 8 cut(s) 292, 543, 544, 950, 1472, 2865, 3025, 4136
PspPPI RGGWCCY 2 cut(s) 2865, 4136
PsrI GAACNNNNNNTAC 2 cut(s) 3573, 3605
PstI CTGCAG 1 cut(s) 3068
PstNI CAGNNNCTG 2 cut(s) 2789, 3842
PsuI RGATCY 4 cut(s) 2167, 3417, 3491, 3838
PsyI GACNNNGTC 1 cut(s) 2545
PvuII CAGCTG 1 cut(s) 1544
RruI TCGCGA 1 cut(s) 18
RseI CAYNNNNRTG 3 cut(s) 63, 1095, 3162
SacI GAGCTC 2 cut(s) 179, 2659
SalI GTCGAC 1 cut(s) 3342
SaqAI TTAA 9 cut(s) 137, 246, 441, 630, 989, 1170, 2112, 2685, 3125
SatI GCNGC 8 cut(s) 56, 217, 1103, 1737, 2014, 2814, 2817, 3474
Sau96I GGNCC 8 cut(s) 292, 543, 544, 950, 1472, 2865, 3025, 4136
ScaI AGTACT 1 cut(s) 3085
SchI GAGTC 4 cut(s) 2203, 2243, 3674, 4022
SduI GDGCHC 9 cut(s) 179, 547, 1135, 1461, 1642, 2659, 2677, 3386, 3958
SfcI CTRYAG 2 cut(s) 450, 3064
Sfr274I CTCGAG 1 cut(s) 581
SinI GGWCC 5 cut(s) 292, 950, 1472, 2865, 4136
SlaI CTCGAG 1 cut(s) 581
SmiMI CAYNNNNRTG 3 cut(s) 63, 1095, 3162
SmlI CTYRAG 6 cut(s) 46, 77, 421, 581, 2111, 3315
SmoI CTYRAG 6 cut(s) 46, 77, 421, 581, 2111, 3315
SpeI ACTAGT 2 cut(s) 1577, 2680
SphI GCATGC 3 cut(s) 2097, 3554, 3815
SseBI AGGCCT 1 cut(s) 2414
SsiI CCGC 7 cut(s) 547, 996, 2011, 2081, 2558, 2696, 3971
SspI AATATT 3 cut(s) 1375, 1438, 3892
SspMI CTAG 9 cut(s) 168, 798, 849, 1578, 1707, 2681, 2690, 2946, 3495
SstI GAGCTC 2 cut(s) 179, 2659
StuI AGGCCT 1 cut(s) 2414
StyI CCWWGG 1 cut(s) 2482
TaiI ACGT 6 cut(s) 483, 1039, 1399, 2770, 2930, 3043
TaqI TCGA 6 cut(s) 582, 1558, 1596, 2653, 3343, 4181
TaqII GACCGA 1 cut(s) 2393
TatI WGTACW 3 cut(s) 3083, 3998, 4190
Tru1I TTAA 9 cut(s) 137, 246, 441, 630, 989, 1170, 2112, 2685, 3125
Tru9I TTAA 9 cut(s) 137, 246, 441, 630, 989, 1170, 2112, 2685, 3125
TseFI GTSAC 6 cut(s) 683, 779, 1728, 2547, 3177, 3632
TseI GCWGC 8 cut(s) 55, 216, 1102, 1736, 2013, 2813, 2816, 3473
Tsp45I GTSAC 6 cut(s) 683, 779, 1728, 2547, 3177, 3632
TspGWI ACGGA 1 cut(s) 1952
Tth111I GACNNNGTC 1 cut(s) 2545
Vha464I CTTAAG 1 cut(s) 2111
VneI GTGCAC 2 cut(s) 2673, 3954
VpaK11BI GGWCC 5 cut(s) 292, 950, 1472, 2865, 4136
VspI ATTAAT 1 cut(s) 246
XagI CCTNNNNNAGG 2 cut(s) 1598, 3147
XapI RAATTY 8 cut(s) 382, 653, 895, 1271, 2147, 2311, 3559, 3900
XbaI TCTAGA 2 cut(s) 2945, 3494
XceI RCATGY 7 cut(s) 1100, 2097, 2894, 3554, 3771, 3815, 4197
XcmI CCANNNNNNNNNTGG 1 cut(s) 1729
XhoI CTCGAG 1 cut(s) 581
XmiI GTMKAC 2 cut(s) 1393, 3343
XmnI GAANNNNTTC 6 cut(s) 148, 399, 1003, 1404, 1672, 3310
XspI CTAG 9 cut(s) 168, 798, 849, 1578, 1707, 2681, 2690, 2946, 3495
ZraI GACGTC 2 cut(s) 481, 3041
ZrmI AGTACT 1 cut(s) 3085
Zsp2I ATGCAT 2 cut(s) 2099, 3009
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.