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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64570 |
| fragaria_vesca | FvH4_3g02070 |
| malus_domestica | MD05G1346800.v1.1 MD05G1347100.v1.1 MD05G1347200.v1.1 MD10G1321400.v1.1 |
| prunus_persica | Prupe.4G020900_v2.0.a1 Prupe.4G020900_v2.0.a1 Prupe.4G020900_v2.0.a1 |
| pyrus_communis | pycom05g31490 pycom10g27210 |
| rosa_chinensis | RchiOBHm_Chr5g0002971 RchiOBHm_Chr5g0003031 RchiOBHm_Chr5g0003091 |
| rosa_laevigata | RLG00000031075 |
| rosa_multiflora | Rmu_sc0000146.1_g000022 Rmu_sc0013603.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00072910 |
| rosa_rugosa | Rorug04G0400900 |
| rosa_samantha | Rh5AG024000 Rh5AG025000 Rh5BG026700 Rh5CG026800 Rh5CG027800 Rh5DG025300 |
| rosa_wichuraiana | Rw5G002270 Rw5G002320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2214 |
| AarI | CACCTGC | 1 cut(s) | 2471 |
| Acc16I | TGCGCA | 1 cut(s) | 4054 |
| Acc36I | ACCTGC | 2 cut(s) | 2471, 3934 |
| Acc65I | GGTACC | 2 cut(s) | 2561, 2693 |
| AccB1I | GGYRCC | 3 cut(s) | 1549, 2561, 2693 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1952, 3590 |
| AccBSI | CCGCTC | 1 cut(s) | 4148 |
| AccI | GTMKAC | 1 cut(s) | 1486 |
| AccIII | TCCGGA | 1 cut(s) | 3052 |
| AciI | CCGC | 7 cut(s) | 637, 1811, 1949, 2764, 2837, 3968, 4146 |
| AclI | AACGTT | 2 cut(s) | 2053, 3908 |
| AclWI | GGATC | 8 cut(s) | 1171, 1768, 2255, 3074, 3437, 3487, 3868, 3932 |
| AcsI | RAATTY | 8 cut(s) | 416, 743, 2404, 2957, 3193, 3238, 3523, 3646 |
| AcuI | CTGAAG | 4 cut(s) | 255, 417, 2854, 3168 |
| AcvI | CACGTG | 1 cut(s) | 3323 |
| AfaI | GTAC | 6 cut(s) | 1320, 1849, 2530, 2563, 2695, 3202 |
| AflII | CTTAAG | 1 cut(s) | 2204 |
| AflIII | ACRYGT | 2 cut(s) | 1186, 4292 |
| AhlI | ACTAGT | 1 cut(s) | 1670 |
| AjiI | CACGTC | 1 cut(s) | 1490 |
| AjnI | CCWGG | 8 cut(s) | 433, 1062, 1084, 1254, 1951, 2427, 3138, 4230 |
| AleI | CACNNNNGTG | 1 cut(s) | 1394 |
| Alw21I | GWGCWC | 5 cut(s) | 233, 1225, 1735, 2776, 2794 |
| Alw26I | GTCTC | 9 cut(s) | 121, 514, 668, 2338, 2515, 2860, 3534, 3753, 4192 |
| Alw44I | GTGCAC | 1 cut(s) | 2790 |
| AlwI | GGATC | 8 cut(s) | 1171, 1768, 2255, 3074, 3437, 3487, 3868, 3932 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 434, 3590 |
| Ama87I | CYCGRG | 2 cut(s) | 630, 671 |
| Aor13HI | TCCGGA | 1 cut(s) | 3052 |
| AoxI | GGCC | 7 cut(s) | 633, 1004, 1065, 1159, 2502, 3141, 3682 |
| ApaI | GGGCCC | 1 cut(s) | 637 |
| ApaLI | GTGCAC | 1 cut(s) | 2790 |
| ApeKI | GCWGC | 8 cut(s) | 109, 458, 1192, 1829, 2106, 2272, 3183, 4118 |
| ApoI | RAATTY | 8 cut(s) | 416, 743, 2404, 2957, 3193, 3238, 3523, 3646 |
| AseI | ATTAAT | 1 cut(s) | 300 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 202, 489, 1497 |
| Asp718I | GGTACC | 2 cut(s) | 2561, 2693 |
| AspA2I | CCTAGG | 1 cut(s) | 4265 |
| AspLEI | GCGC | 6 cut(s) | 1014, 1303, 2079, 2289, 4055, 4219 |
| AspS9I | GGNCC | 6 cut(s) | 633, 634, 1040, 1565, 3142, 4235 |
| AsuC2I | CCSGG | 4 cut(s) | 631, 632, 2278, 2526 |
| AsuHPI | GGTGA | 9 cut(s) | 198, 266, 779, 785, 1142, 1452, 2154, 2495, 3752 |
| AsuII | TTCGAA | 1 cut(s) | 1439 |
| AvaI | CYCGRG | 2 cut(s) | 630, 671 |
| AvaII | GGWCC | 3 cut(s) | 1040, 1565, 4235 |
| AvrII | CCTAGG | 1 cut(s) | 4265 |
| BaeGI | GKGCMC | 3 cut(s) | 637, 2794, 3461 |
| BanI | GGYRCC | 3 cut(s) | 1549, 2561, 2693 |
| BanII | GRGCYC | 4 cut(s) | 233, 637, 2657, 2776 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2914, 2946 |
| BauI | CACGAG | 1 cut(s) | 318 |
| BbrPI | CACGTG | 1 cut(s) | 3323 |
| BbsI | GAAGAC | 6 cut(s) | 18, 573, 931, 1101, 1998, 3308 |
| Bbv12I | GWGCWC | 5 cut(s) | 233, 1225, 1735, 2776, 2794 |
| BbvCI | CCTCAGC | 1 cut(s) | 3231 |
| BbvI | GCAGC | 8 cut(s) | 121, 445, 1204, 1816, 2093, 2259, 3195, 4105 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2084, 2118 |
| BciT130I | CCWGG | 8 cut(s) | 435, 1064, 1086, 1256, 1953, 2429, 3140, 4232 |
| BcnI | CCSGG | 4 cut(s) | 631, 632, 2278, 2526 |
| BcoDI | GTCTC | 9 cut(s) | 121, 514, 668, 2338, 2515, 2860, 3534, 3753, 4192 |
| BcuI | ACTAGT | 1 cut(s) | 1670 |
| BfaI | CTAG | 7 cut(s) | 939, 1671, 1800, 3003, 3063, 4241, 4266 |
| BfmI | CTRYAG | 5 cut(s) | 540, 1869, 2172, 3181, 4314 |
| BfoI | RGCGCY | 2 cut(s) | 1304, 2080 |
| BfrI | CTTAAG | 1 cut(s) | 2204 |
| BfuAI | ACCTGC | 2 cut(s) | 2471, 3934 |
| BisI | GCNGC | 8 cut(s) | 110, 459, 1193, 1830, 2107, 2273, 3184, 4119 |
| BlnI | CCTAGG | 1 cut(s) | 4265 |
| BlsI | GCNGC | 8 cut(s) | 111, 460, 1194, 1831, 2108, 2274, 3185, 4120 |
| BmcAI | AGTACT | 1 cut(s) | 3202 |
| Bme18I | GGWCC | 3 cut(s) | 1040, 1565, 4235 |
| BmeT110I | CYCGRG | 2 cut(s) | 630, 671 |
| BmgBI | CACGTC | 1 cut(s) | 1490 |
| BmgT120I | GGNCC | 6 cut(s) | 633, 634, 1040, 1565, 3142, 4235 |
| BmiI | GGNNCC | 9 cut(s) | 199, 635, 1041, 1551, 1768, 2563, 2695, 3144, 4236 |
| BmrI | ACTGGG | 1 cut(s) | 3371 |
| BmuI | ACTGGG | 1 cut(s) | 3371 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1045, 4110 |
| BpiI | GAAGAC | 6 cut(s) | 18, 573, 931, 1101, 1998, 3308 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 301, 333, 2644, 2676 |
| BpmI | CTGGAG | 2 cut(s) | 2934, 4315 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3231 |
| Bpu14I | TTCGAA | 1 cut(s) | 1439 |
| BpuEI | CTTGAG | 4 cut(s) | 152, 884, 1719, 2949 |
| BpuMI | CCSGG | 4 cut(s) | 631, 632, 2278, 2526 |
| BsaAI | YACGTR | 3 cut(s) | 1421, 1663, 3323 |
| BsaBI | GATNNNNATC | 2 cut(s) | 180, 3336 |
| BsaI | GGTCTC | 1 cut(s) | 2515 |
| BsaJI | CCNNGG | 9 cut(s) | 630, 1062, 1085, 1254, 1877, 2276, 4008, 4231, 4265 |
| BsaWI | WCCGGW | 2 cut(s) | 2690, 3052 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2512, 2542, 3007, 3037, 4313, 4343 |
| Bse3DI | GCAATG | 4 cut(s) | 1007, 2288, 2289, 3425 |
| Bse8I | GATNNNNATC | 2 cut(s) | 180, 3336 |
| BseAI | TCCGGA | 1 cut(s) | 3052 |
| BseBI | CCWGG | 8 cut(s) | 435, 1064, 1086, 1256, 1953, 2429, 3140, 4232 |
| BseDI | CCNNGG | 9 cut(s) | 630, 1062, 1085, 1254, 1877, 2276, 4008, 4231, 4265 |
| BseJI | GATNNNNATC | 2 cut(s) | 180, 3336 |
| BseMI | GCAATG | 4 cut(s) | 1007, 2288, 2289, 3425 |
| BseRI | GAGGAG | 4 cut(s) | 149, 920, 930, 2610 |
| BseSI | GKGCMC | 3 cut(s) | 637, 2794, 3461 |
| BseXI | GCAGC | 8 cut(s) | 121, 445, 1204, 1816, 2093, 2259, 3195, 4105 |
| BseYI | CCCAGC | 1 cut(s) | 3430 |
| BsgI | GTGCAG | 4 cut(s) | 1211, 2478, 3381, 4300 |
| Bsh1285I | CGRYCG | 1 cut(s) | 4063 |
| BshFI | GGCC | 7 cut(s) | 635, 1006, 1067, 1161, 2504, 3143, 3684 |
| BshNI | GGYRCC | 3 cut(s) | 1549, 2561, 2693 |
| BsiEI | CGRYCG | 1 cut(s) | 4063 |
| BsiHKAI | GWGCWC | 5 cut(s) | 233, 1225, 1735, 2776, 2794 |
| BsiHKCI | CYCGRG | 2 cut(s) | 630, 671 |
| BsiSI | CCGG | 6 cut(s) | 631, 1925, 2278, 2525, 2691, 3053 |
| BslFI | GGGAC | 7 cut(s) | 1053, 1102, 1859, 2214, 2234, 3359, 4128 |
| BsmAI | GTCTC | 9 cut(s) | 121, 514, 668, 2338, 2515, 2860, 3534, 3753, 4192 |
| BsmBI | CGTCTC | 2 cut(s) | 2338, 3534 |
| BsmFI | GGGAC | 7 cut(s) | 1053, 1102, 1859, 2214, 2234, 3359, 4128 |
| BsmI | GAATGC | 2 cut(s) | 1497, 1499 |
| BsnI | GGCC | 7 cut(s) | 635, 1006, 1067, 1161, 2504, 3143, 3684 |
| Bso31I | GGTCTC | 1 cut(s) | 2515 |
| BsoBI | CYCGRG | 2 cut(s) | 630, 671 |
| Bsp119I | TTCGAA | 1 cut(s) | 1439 |
| Bsp120I | GGGCCC | 1 cut(s) | 633 |
| Bsp1286I | GDGCHC | 8 cut(s) | 233, 637, 1225, 1735, 2657, 2776, 2794, 3461 |
| Bsp13I | TCCGGA | 1 cut(s) | 3052 |
| BspACI | CCGC | 7 cut(s) | 637, 1811, 1949, 2764, 2837, 3968, 4146 |
| BspANI | GGCC | 7 cut(s) | 635, 1006, 1067, 1161, 2504, 3143, 3684 |
| BspEI | TCCGGA | 1 cut(s) | 3052 |
| BspHI | TCATGA | 2 cut(s) | 99, 2497 |
| BspLI | GGNNCC | 9 cut(s) | 199, 635, 1041, 1551, 1768, 2563, 2695, 3144, 4236 |
| BspMAI | CTGCAG | 2 cut(s) | 2176, 3185 |
| BspMI | ACCTGC | 2 cut(s) | 2471, 3934 |
| BspPI | GGATC | 8 cut(s) | 1171, 1768, 2255, 3074, 3437, 3487, 3868, 3932 |
| BspT104I | TTCGAA | 1 cut(s) | 1439 |
| BspT107I | GGYRCC | 3 cut(s) | 1549, 2561, 2693 |
| BspTI | CTTAAG | 1 cut(s) | 2204 |
| BspTNI | GGTCTC | 1 cut(s) | 2515 |
| BsrBI | CCGCTC | 1 cut(s) | 4148 |
| BsrDI | GCAATG | 4 cut(s) | 1007, 2288, 2289, 3425 |
| BssECI | CCNNGG | 9 cut(s) | 630, 1062, 1085, 1254, 1877, 2276, 4008, 4231, 4265 |
| BssSI | CACGAG | 1 cut(s) | 318 |
| BssT1I | CCWWGG | 3 cut(s) | 1877, 4008, 4265 |
| Bst2BI | CACGAG | 1 cut(s) | 318 |
| Bst2UI | CCWGG | 8 cut(s) | 435, 1064, 1086, 1256, 1953, 2429, 3140, 4232 |
| Bst6I | CTCTTC | 7 cut(s) | 849, 1307, 2172, 2336, 3091, 3771, 3825 |
| BstAFI | CTTAAG | 1 cut(s) | 2204 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3130 |
| BstBAI | YACGTR | 3 cut(s) | 1421, 1663, 3323 |
| BstBI | TTCGAA | 1 cut(s) | 1439 |
| BstC8I | GCNNGC | 6 cut(s) | 637, 1069, 1305, 3639, 3668, 3970 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1479, 3264, 3675 |
| BstH2I | RGCGCY | 2 cut(s) | 1304, 2080 |
| BstHHI | GCGC | 6 cut(s) | 1014, 1303, 2079, 2289, 4055, 4219 |
| BstMAI | GTCTC | 9 cut(s) | 121, 514, 668, 2338, 2515, 2860, 3534, 3753, 4192 |
| BstMCI | CGRYCG | 1 cut(s) | 4063 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 86, 1288, 2278, 2510, 3130, 4341 |
| BstNI | CCWGG | 8 cut(s) | 435, 1064, 1086, 1256, 1953, 2429, 3140, 4232 |
| BstNSI | RCATGY | 4 cut(s) | 1190, 2190, 3390, 4296 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1045, 4110 |
| BstSFI | CTRYAG | 5 cut(s) | 540, 1869, 2172, 3181, 4314 |
| BstSLI | GKGCMC | 3 cut(s) | 637, 2794, 3461 |
| BstV1I | GCAGC | 8 cut(s) | 121, 445, 1204, 1816, 2093, 2259, 3195, 4105 |
| BstV2I | GAAGAC | 6 cut(s) | 18, 573, 931, 1101, 1998, 3308 |
| BstX2I | RGATCY | 4 cut(s) | 1760, 2260, 3492, 3937 |
| BstYI | RGATCY | 4 cut(s) | 1760, 2260, 3492, 3937 |
| BsuRI | GGCC | 7 cut(s) | 635, 1006, 1067, 1161, 2504, 3143, 3684 |
| BtrI | CACGTC | 1 cut(s) | 1490 |
| BtsI | GCAGTG | 5 cut(s) | 523, 750, 1143, 1168, 4342 |
| BveI | ACCTGC | 2 cut(s) | 2471, 3934 |
| Cac8I | GCNNGC | 6 cut(s) | 637, 1069, 1305, 3639, 3668, 3970 |
| CaiI | CAGNNNCTG | 2 cut(s) | 434, 3590 |
| CciI | TCATGA | 2 cut(s) | 99, 2497 |
| CfoI | GCGC | 6 cut(s) | 1014, 1303, 2079, 2289, 4055, 4219 |
| Cfr13I | GGNCC | 6 cut(s) | 633, 634, 1040, 1565, 3142, 4235 |
| Cfr9I | CCCGGG | 1 cut(s) | 630 |
| CseI | GACGC | 1 cut(s) | 3038 |
| Csp6I | GTAC | 6 cut(s) | 1319, 1848, 2529, 2562, 2694, 3201 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3435, 3470 |
| CviQI | GTAC | 6 cut(s) | 1319, 1848, 2529, 2562, 2694, 3201 |
| Eam1104I | CTCTTC | 7 cut(s) | 849, 1307, 2172, 2336, 3091, 3771, 3825 |
| EarI | CTCTTC | 7 cut(s) | 849, 1307, 2172, 2336, 3091, 3771, 3825 |
| EciI | GGCGGA | 1 cut(s) | 2826 |
| Ecl136II | GAGCTC | 2 cut(s) | 231, 2774 |
| Eco130I | CCWWGG | 3 cut(s) | 1877, 4008, 4265 |
| Eco147I | AGGCCT | 1 cut(s) | 2504 |
| Eco24I | GRGCYC | 4 cut(s) | 233, 637, 2657, 2776 |
| Eco31I | GGTCTC | 1 cut(s) | 2515 |
| Eco32I | GATATC | 1 cut(s) | 2892 |
| Eco47I | GGWCC | 3 cut(s) | 1040, 1565, 4235 |
| Eco53kI | GAGCTC | 2 cut(s) | 231, 2774 |
| Eco57I | CTGAAG | 4 cut(s) | 255, 417, 2854, 3168 |
| Eco72I | CACGTG | 1 cut(s) | 3323 |
| Eco88I | CYCGRG | 2 cut(s) | 630, 671 |
| EcoICRI | GAGCTC | 2 cut(s) | 231, 2774 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1479, 3264, 3675 |
| EcoO109I | RGGNCCY | 2 cut(s) | 3142, 4235 |
| EcoRII | CCWGG | 8 cut(s) | 433, 1062, 1084, 1254, 1951, 2427, 3138, 4230 |
| EcoRV | GATATC | 1 cut(s) | 2892 |
| EcoT14I | CCWWGG | 3 cut(s) | 1877, 4008, 4265 |
| EcoT22I | ATGCAT | 2 cut(s) | 1499, 3126 |
| EcoT38I | GRGCYC | 4 cut(s) | 233, 637, 2657, 2776 |
| ErhI | CCWWGG | 3 cut(s) | 1877, 4008, 4265 |
| Esp3I | CGTCTC | 2 cut(s) | 2338, 3534 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 186, 218, 846, 878 |
| FaqI | GGGAC | 7 cut(s) | 1053, 1102, 1859, 2214, 2234, 3359, 4128 |
| FauI | CCCGC | 3 cut(s) | 644, 3961, 4153 |
| FauNDI | CATATG | 4 cut(s) | 1411, 2234, 2724, 3120 |
| FblI | GTMKAC | 1 cut(s) | 1486 |
| Fnu4HI | GCNGC | 8 cut(s) | 110, 459, 1193, 1830, 2107, 2273, 3184, 4119 |
| FriOI | GRGCYC | 4 cut(s) | 233, 637, 2657, 2776 |
| Fsp4HI | GCNGC | 8 cut(s) | 110, 459, 1193, 1830, 2107, 2273, 3184, 4119 |
| FspAI | RTGCGCAY | 1 cut(s) | 4054 |
| FspBI | CTAG | 7 cut(s) | 939, 1671, 1800, 3003, 3063, 4241, 4266 |
| FspI | TGCGCA | 1 cut(s) | 4054 |
| GlaI | GCGC | 6 cut(s) | 1013, 1302, 2078, 2288, 4054, 4218 |
| GluI | GCNGC | 8 cut(s) | 110, 459, 1193, 1830, 2107, 2273, 3184, 4119 |
| GsaI | CCCAGC | 1 cut(s) | 3434 |
| GsuI | CTGGAG | 2 cut(s) | 2934, 4315 |
| HaeII | RGCGCY | 2 cut(s) | 1304, 2080 |
| HaeIII | GGCC | 7 cut(s) | 635, 1006, 1067, 1161, 2504, 3143, 3684 |
| HapII | CCGG | 6 cut(s) | 631, 1925, 2278, 2525, 2691, 3053 |
| HgaI | GACGC | 1 cut(s) | 3038 |
| HhaI | GCGC | 6 cut(s) | 1014, 1303, 2079, 2289, 4055, 4219 |
| Hin6I | GCGC | 6 cut(s) | 1012, 1301, 2077, 2287, 4053, 4217 |
| HinP1I | GCGC | 6 cut(s) | 1012, 1301, 2077, 2287, 4053, 4217 |
| HincII | GTYRAC | 3 cut(s) | 265, 786, 1805 |
| HindII | GTYRAC | 3 cut(s) | 265, 786, 1805 |
| HindIII | AAGCTT | 2 cut(s) | 213, 2318 |
| HpaII | CCGG | 6 cut(s) | 631, 1925, 2278, 2525, 2691, 3053 |
| HphI | GGTGA | 9 cut(s) | 198, 266, 779, 785, 1142, 1452, 2154, 2495, 3752 |
| Hpy166II | GTNNAC | 9 cut(s) | 265, 623, 786, 1319, 1487, 1805, 2792, 3161, 4210 |
| Hpy8I | GTNNAC | 9 cut(s) | 265, 623, 786, 1319, 1487, 1805, 2792, 3161, 4210 |
| Hpy99I | CGWCG | 2 cut(s) | 69, 1656 |
| HpyCH4IV | ACGT | 8 cut(s) | 1420, 1489, 1662, 2053, 3157, 3322, 3543, 3908 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 86, 1288, 2278, 2510, 3130, 4341 |
| HpySE526I | ACGT | 8 cut(s) | 1420, 1489, 1662, 2053, 3157, 3322, 3543, 3908 |
| HspAI | GCGC | 6 cut(s) | 1012, 1301, 2077, 2287, 4053, 4217 |
| Kpn2I | TCCGGA | 1 cut(s) | 3052 |
| KpnI | GGTACC | 2 cut(s) | 2565, 2697 |
| LmnI | GCTCC | 6 cut(s) | 917, 967, 1287, 1597, 1792, 2623 |
| Lsp1109I | GCAGC | 8 cut(s) | 121, 445, 1204, 1816, 2093, 2259, 3195, 4105 |
| MaeI | CTAG | 7 cut(s) | 939, 1671, 1800, 3003, 3063, 4241, 4266 |
| MaeII | ACGT | 8 cut(s) | 1420, 1489, 1662, 2053, 3157, 3322, 3543, 3908 |
| MaeIII | GTNAC | 7 cut(s) | 557, 858, 1292, 1658, 1821, 3379, 3785 |
| MbiI | CCGCTC | 1 cut(s) | 4148 |
| MflI | RGATCY | 4 cut(s) | 1760, 2260, 3492, 3937 |
| MhlI | GDGCHC | 8 cut(s) | 233, 637, 1225, 1735, 2657, 2776, 2794, 3461 |
| MlyI | GAGTC | 2 cut(s) | 3415, 3782 |
| MmeI | TCCRAC | 4 cut(s) | 1588, 2950, 3333, 3929 |
| Mph1103I | ATGCAT | 2 cut(s) | 1499, 3126 |
| MroI | TCCGGA | 1 cut(s) | 3052 |
| MroXI | GAANNNNTTC | 3 cut(s) | 202, 489, 1497 |
| MseI | TTAA | 8 cut(s) | 300, 531, 1260, 2205, 2802, 3242, 3564, 4037 |
| MslI | CAYNNNNRTG | 4 cut(s) | 75, 1185, 1290, 1394 |
| MspCI | CTTAAG | 1 cut(s) | 2204 |
| MspI | CCGG | 6 cut(s) | 631, 1925, 2278, 2525, 2691, 3053 |
| Mva1269I | GAATGC | 2 cut(s) | 1497, 1499 |
| MvaI | CCWGG | 8 cut(s) | 435, 1064, 1086, 1256, 1953, 2429, 3140, 4232 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 86, 1288, 2278, 2510, 3130, 4341 |
| NciI | CCSGG | 4 cut(s) | 631, 632, 2278, 2526 |
| NdeI | CATATG | 4 cut(s) | 1411, 2234, 2724, 3120 |
| NlaIV | GGNNCC | 9 cut(s) | 199, 635, 1041, 1551, 1768, 2563, 2695, 3144, 4236 |
| NmeAIII | GCCGAG | 2 cut(s) | 1216, 4152 |
| NmuCI | GTSAC | 3 cut(s) | 1292, 1821, 3785 |
| NsbI | TGCGCA | 1 cut(s) | 4054 |
| NsiI | ATGCAT | 2 cut(s) | 1499, 3126 |
| NspI | RCATGY | 4 cut(s) | 1190, 2190, 3390, 4296 |
| NspV | TTCGAA | 1 cut(s) | 1439 |
| OliI | CACNNNNGTG | 1 cut(s) | 1394 |
| PaeR7I | CTCGAG | 1 cut(s) | 671 |
| PagI | TCATGA | 2 cut(s) | 99, 2497 |
| PaqCI | CACCTGC | 1 cut(s) | 2471 |
| PceI | AGGCCT | 1 cut(s) | 2504 |
| PciI | ACATGT | 2 cut(s) | 1186, 4292 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2767 |
| PctI | GAATGC | 2 cut(s) | 1497, 1499 |
| PdmI | GAANNNNTTC | 3 cut(s) | 202, 489, 1497 |
| PflFI | GACNNNGTC | 1 cut(s) | 2635 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1952, 3590 |
| PfoI | TCCNGGA | 1 cut(s) | 433 |
| PkrI | GCNGC | 8 cut(s) | 111, 460, 1194, 1831, 2108, 2274, 3185, 4120 |
| Ple19I | CGATCG | 1 cut(s) | 4063 |
| PleI | GAGTC | 2 cut(s) | 3415, 3782 |
| PmaCI | CACGTG | 1 cut(s) | 3323 |
| PmlI | CACGTG | 1 cut(s) | 3323 |
| PpsI | GAGTC | 2 cut(s) | 3415, 3782 |
| Ppu21I | YACGTR | 3 cut(s) | 1421, 1663, 3323 |
| PpuMI | RGGWCCY | 1 cut(s) | 4235 |
| PscI | ACATGT | 2 cut(s) | 1186, 4292 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1045, 4110 |
| PshBI | ATTAAT | 1 cut(s) | 300 |
| PsiI | TTATAA | 1 cut(s) | 2214 |
| Psp124BI | GAGCTC | 2 cut(s) | 233, 2776 |
| Psp1406I | AACGTT | 2 cut(s) | 2053, 3908 |
| Psp5II | RGGWCCY | 1 cut(s) | 4235 |
| Psp6I | CCWGG | 8 cut(s) | 433, 1062, 1084, 1254, 1951, 2427, 3138, 4230 |
| PspCI | CACGTG | 1 cut(s) | 3323 |
| PspFI | CCCAGC | 1 cut(s) | 3430 |
| PspGI | CCWGG | 8 cut(s) | 433, 1062, 1084, 1254, 1951, 2427, 3138, 4230 |
| PspN4I | GGNNCC | 9 cut(s) | 199, 635, 1041, 1551, 1768, 2563, 2695, 3144, 4236 |
| PspOMI | GGGCCC | 1 cut(s) | 633 |
| PspPI | GGNCC | 6 cut(s) | 633, 634, 1040, 1565, 3142, 4235 |
| PspPPI | RGGWCCY | 1 cut(s) | 4235 |
| PstI | CTGCAG | 2 cut(s) | 2176, 3185 |
| PstNI | CAGNNNCTG | 2 cut(s) | 434, 3590 |
| PsuI | RGATCY | 4 cut(s) | 1760, 2260, 3492, 3937 |
| PsyI | GACNNNGTC | 1 cut(s) | 2635 |
| PvuI | CGATCG | 1 cut(s) | 4063 |
| RsaI | GTAC | 6 cut(s) | 1320, 1849, 2530, 2563, 2695, 3202 |
| RsaNI | GTAC | 6 cut(s) | 1319, 1848, 2529, 2562, 2694, 3201 |
| RseI | CAYNNNNRTG | 4 cut(s) | 75, 1185, 1290, 1394 |
| SacI | GAGCTC | 2 cut(s) | 233, 2776 |
| SaqAI | TTAA | 8 cut(s) | 300, 531, 1260, 2205, 2802, 3242, 3564, 4037 |
| SatI | GCNGC | 8 cut(s) | 110, 459, 1193, 1830, 2107, 2273, 3184, 4119 |
| Sau96I | GGNCC | 6 cut(s) | 633, 634, 1040, 1565, 3142, 4235 |
| ScaI | AGTACT | 1 cut(s) | 3202 |
| SchI | GAGTC | 2 cut(s) | 3415, 3782 |
| SduI | GDGCHC | 8 cut(s) | 233, 637, 1225, 1735, 2657, 2776, 2794, 3461 |
| SfcI | CTRYAG | 5 cut(s) | 540, 1869, 2172, 3181, 4314 |
| Sfr274I | CTCGAG | 1 cut(s) | 671 |
| SfuI | TTCGAA | 1 cut(s) | 1439 |
| SinI | GGWCC | 3 cut(s) | 1040, 1565, 4235 |
| SlaI | CTCGAG | 1 cut(s) | 671 |
| SmaI | CCCGGG | 1 cut(s) | 632 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 75, 1185, 1290, 1394 |
| SmlI | CTYRAG | 6 cut(s) | 131, 671, 863, 1734, 2204, 2964 |
| SmoI | CTYRAG | 6 cut(s) | 131, 671, 863, 1734, 2204, 2964 |
| SpeI | ACTAGT | 1 cut(s) | 1670 |
| SseBI | AGGCCT | 1 cut(s) | 2504 |
| SsiI | CCGC | 7 cut(s) | 637, 1811, 1949, 2764, 2837, 3968, 4146 |
| SspI | AATATT | 4 cut(s) | 718, 1468, 3709, 3991 |
| SspMI | CTAG | 7 cut(s) | 939, 1671, 1800, 3003, 3063, 4241, 4266 |
| SstI | GAGCTC | 2 cut(s) | 233, 2776 |
| StuI | AGGCCT | 1 cut(s) | 2504 |
| StyI | CCWWGG | 3 cut(s) | 1877, 4008, 4265 |
| TaiI | ACGT | 8 cut(s) | 1423, 1492, 1665, 2056, 3160, 3325, 3546, 3911 |
| TaqI | TCGA | 7 cut(s) | 672, 1439, 1651, 1969, 2623, 2770, 4063 |
| TaqII | GACCGA | 1 cut(s) | 4140 |
| TatI | WGTACW | 1 cut(s) | 3200 |
| Tru1I | TTAA | 8 cut(s) | 300, 531, 1260, 2205, 2802, 3242, 3564, 4037 |
| Tru9I | TTAA | 8 cut(s) | 300, 531, 1260, 2205, 2802, 3242, 3564, 4037 |
| TseFI | GTSAC | 3 cut(s) | 1292, 1821, 3785 |
| TseI | GCWGC | 8 cut(s) | 109, 458, 1192, 1829, 2106, 2272, 3183, 4118 |
| Tsp45I | GTSAC | 3 cut(s) | 1292, 1821, 3785 |
| TspGWI | ACGGA | 3 cut(s) | 1324, 2573, 3864 |
| TspMI | CCCGGG | 1 cut(s) | 630 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2635 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1952, 3590 |
| Vha464I | CTTAAG | 1 cut(s) | 2204 |
| VneI | GTGCAC | 1 cut(s) | 2790 |
| VpaK11BI | GGWCC | 3 cut(s) | 1040, 1565, 4235 |
| VspI | ATTAAT | 1 cut(s) | 300 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1479, 3264, 3675 |
| XapI | RAATTY | 8 cut(s) | 416, 743, 2404, 2957, 3193, 3238, 3523, 3646 |
| XbaI | TCTAGA | 1 cut(s) | 3002 |
| XceI | RCATGY | 4 cut(s) | 1190, 2190, 3390, 4296 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1822 |
| XhoI | CTCGAG | 1 cut(s) | 671 |
| XmaI | CCCGGG | 1 cut(s) | 630 |
| XmaJI | CCTAGG | 1 cut(s) | 4265 |
| XmiI | GTMKAC | 1 cut(s) | 1486 |
| XmnI | GAANNNNTTC | 3 cut(s) | 202, 489, 1497 |
| XspI | CTAG | 7 cut(s) | 939, 1671, 1800, 3003, 3063, 4241, 4266 |
| ZrmI | AGTACT | 1 cut(s) | 3202 |
| Zsp2I | ATGCAT | 2 cut(s) | 1499, 3126 |