PRLI-interacting factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G19900 AT5G19900 AT5G19900 AT5G19900 AT5G19900 |
| fragaria_vesca | FvH4_3g44330 FvH4_3g44330 |
| malus_domestica | MD03G1014800.v1.1 MD11G1016000.v1.1 |
| prunus_persica | Prupe.6G014100_v2.0.a1 |
| pyrus_communis | pycom03g01240 pycom11g01120 |
| rosa_chinensis | RchiOBHm_Chr5g0080701 |
| rosa_laevigata | RLG00000036887 |
| rosa_multiflora | Rmu_sc0002380.1_g000013 Rmu_sc0027070.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00002720 |
| rosa_rugosa | Rorug05G0471700 Rorug05G0471700 |
| rosa_samantha | Rh5AG524800 Rh5BG546900 Rh5CG570300 Rh5DG557100 |
| rosa_wichuraiana | Rw5G048670 Rw5G049240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 344 |
| AccB1I | GGYRCC | 2 cut(s) | 118, 1005 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1015 |
| AccII | CGCG | 1 cut(s) | 637 |
| AclWI | GGATC | 1 cut(s) | 760 |
| AcoI | YGGCCR | 1 cut(s) | 1170 |
| AcsI | RAATTY | 2 cut(s) | 473, 1301 |
| AcuI | CTGAAG | 1 cut(s) | 1374 |
| AcyI | GRCGYC | 1 cut(s) | 119 |
| AfaI | GTAC | 1 cut(s) | 833 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 365, 1015, 1091 |
| AflIII | ACRYGT | 1 cut(s) | 1476 |
| AgsI | TTSAA | 2 cut(s) | 934, 1055 |
| AhlI | ACTAGT | 1 cut(s) | 577 |
| AjiI | CACGTC | 1 cut(s) | 1477 |
| AjnI | CCWGG | 3 cut(s) | 135, 721, 1455 |
| AluBI | AGCT | 4 cut(s) | 19, 59, 905, 1315 |
| AluI | AGCT | 4 cut(s) | 19, 59, 905, 1315 |
| Alw26I | GTCTC | 4 cut(s) | 204, 453, 934, 1388 |
| AlwI | GGATC | 1 cut(s) | 760 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 103 |
| AoxI | GGCC | 3 cut(s) | 236, 558, 1170 |
| ApeKI | GCWGC | 8 cut(s) | 103, 106, 148, 157, 160, 163, 166, 247 |
| ApoI | RAATTY | 2 cut(s) | 473, 1301 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1233 |
| AspLEI | GCGC | 4 cut(s) | 34, 121, 511, 1166 |
| AspS9I | GGNCC | 1 cut(s) | 802 |
| AsuC2I | CCSGG | 1 cut(s) | 469 |
| AsuHPI | GGTGA | 5 cut(s) | 607, 1115, 1264, 1378, 1424 |
| AvaII | GGWCC | 1 cut(s) | 802 |
| BaeGI | GKGCMC | 1 cut(s) | 1224 |
| BanI | GGYRCC | 2 cut(s) | 118, 1005 |
| BbsI | GAAGAC | 1 cut(s) | 117 |
| BbvCI | CCTCAGC | 1 cut(s) | 240 |
| BbvI | GCAGC | 8 cut(s) | 90, 118, 160, 169, 172, 175, 178, 259 |
| BccI | CCATC | 9 cut(s) | 109, 674, 820, 946, 1009, 1061, 1114, 1136, 1357 |
| BceAI | ACGGC | 3 cut(s) | 106, 262, 343 |
| BciT130I | CCWGG | 3 cut(s) | 137, 723, 1457 |
| BciVI | GTATCC | 2 cut(s) | 410, 886 |
| BclI | TGATCA | 1 cut(s) | 886 |
| BcnI | CCSGG | 1 cut(s) | 469 |
| BcoDI | GTCTC | 4 cut(s) | 204, 453, 934, 1388 |
| BcuI | ACTAGT | 1 cut(s) | 577 |
| BfaI | CTAG | 1 cut(s) | 578 |
| BfmI | CTRYAG | 1 cut(s) | 104 |
| BfoI | RGCGCY | 2 cut(s) | 35, 122 |
| BfuI | GTATCC | 2 cut(s) | 410, 886 |
| Bme1390I | CCNGG | 4 cut(s) | 137, 469, 723, 1457 |
| Bme18I | GGWCC | 1 cut(s) | 802 |
| BmgBI | CACGTC | 1 cut(s) | 1477 |
| BmgT120I | GGNCC | 1 cut(s) | 802 |
| BmiI | GGNNCC | 2 cut(s) | 120, 1007 |
| BmrFI | CCNGG | 4 cut(s) | 137, 469, 723, 1457 |
| BmsI | GCATC | 2 cut(s) | 975, 1069 |
| BpiI | GAAGAC | 1 cut(s) | 117 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 43, 75, 184, 216 |
| BpmI | CTGGAG | 2 cut(s) | 1305, 1478 |
| Bpu10I | CCTNAGC | 1 cut(s) | 240 |
| BpuEI | CTTGAG | 1 cut(s) | 45 |
| BpuMI | CCSGG | 1 cut(s) | 469 |
| BsaHI | GRCGYC | 1 cut(s) | 119 |
| BsaJI | CCNNGG | 2 cut(s) | 135, 521 |
| BsaWI | WCCGGW | 1 cut(s) | 592 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 782, 812, 947, 977 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 365, 1015, 1091 |
| Bse118I | RCCGGY | 1 cut(s) | 560 |
| Bse1I | ACTGG | 1 cut(s) | 1339 |
| BseBI | CCWGG | 3 cut(s) | 137, 723, 1457 |
| BseDI | CCNNGG | 2 cut(s) | 135, 521 |
| BseGI | GGATG | 5 cut(s) | 889, 990, 1084, 1198, 1438 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 365, 1015, 1091 |
| BseMII | CTCAG | 7 cut(s) | 188, 215, 254, 266, 464, 1107, 1389 |
| BseNI | ACTGG | 1 cut(s) | 1339 |
| BseSI | GKGCMC | 1 cut(s) | 1224 |
| BseXI | GCAGC | 8 cut(s) | 90, 118, 160, 169, 172, 175, 178, 259 |
| Bsh1236I | CGCG | 1 cut(s) | 637 |
| Bsh1285I | CGRYCG | 1 cut(s) | 719 |
| BshFI | GGCC | 3 cut(s) | 238, 560, 1172 |
| BshNI | GGYRCC | 2 cut(s) | 118, 1005 |
| BsiEI | CGRYCG | 1 cut(s) | 719 |
| BsiSI | CCGG | 4 cut(s) | 469, 561, 593, 602 |
| BslFI | GGGAC | 1 cut(s) | 332 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 365, 1015, 1091 |
| BsmAI | GTCTC | 4 cut(s) | 204, 453, 934, 1388 |
| BsmFI | GGGAC | 1 cut(s) | 332 |
| BsmI | GAATGC | 1 cut(s) | 1426 |
| BsnI | GGCC | 3 cut(s) | 238, 560, 1172 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1224 |
| Bsp143I | GATC | 4 cut(s) | 7, 752, 886, 1383 |
| BspANI | GGCC | 3 cut(s) | 238, 560, 1172 |
| BspCNI | CTCAG | 7 cut(s) | 187, 214, 253, 265, 463, 1108, 1390 |
| BspFNI | CGCG | 1 cut(s) | 637 |
| BspHI | TCATGA | 1 cut(s) | 436 |
| BspLI | GGNNCC | 2 cut(s) | 120, 1007 |
| BspMAI | CTGCAG | 1 cut(s) | 108 |
| BspPI | GGATC | 1 cut(s) | 760 |
| BspQI | GCTCTTC | 1 cut(s) | 1457 |
| BspT107I | GGYRCC | 2 cut(s) | 118, 1005 |
| BsrFI | RCCGGY | 1 cut(s) | 560 |
| BsrI | ACTGG | 1 cut(s) | 1339 |
| BssAI | RCCGGY | 1 cut(s) | 560 |
| BssECI | CCNNGG | 2 cut(s) | 135, 521 |
| BssMI | GATC | 4 cut(s) | 7, 752, 886, 1383 |
| BssNI | GRCGYC | 1 cut(s) | 119 |
| BssT1I | CCWWGG | 1 cut(s) | 521 |
| Bst2UI | CCWGG | 3 cut(s) | 137, 723, 1457 |
| Bst4CI | ACNGT | 3 cut(s) | 447, 845, 1506 |
| Bst6I | CTCTTC | 4 cut(s) | 185, 1026, 1284, 1457 |
| BstACI | GRCGYC | 1 cut(s) | 119 |
| BstC8I | GCNNGC | 3 cut(s) | 74, 562, 1453 |
| BstDEI | CTNAG | 7 cut(s) | 174, 201, 240, 252, 450, 1116, 1398 |
| BstF5I | GGATG | 5 cut(s) | 889, 990, 1084, 1198, 1438 |
| BstFNI | CGCG | 1 cut(s) | 637 |
| BstH2I | RGCGCY | 2 cut(s) | 35, 122 |
| BstHHI | GCGC | 4 cut(s) | 34, 121, 511, 1166 |
| BstKTI | GATC | 4 cut(s) | 10, 755, 889, 1386 |
| BstMAI | GTCTC | 4 cut(s) | 204, 453, 934, 1388 |
| BstMBI | GATC | 4 cut(s) | 7, 752, 886, 1383 |
| BstMCI | CGRYCG | 1 cut(s) | 719 |
| BstNI | CCWGG | 3 cut(s) | 137, 723, 1457 |
| BstNSI | RCATGY | 1 cut(s) | 782 |
| BstSCI | CCNGG | 4 cut(s) | 135, 467, 721, 1455 |
| BstSFI | CTRYAG | 1 cut(s) | 104 |
| BstSLI | GKGCMC | 1 cut(s) | 1224 |
| BstUI | CGCG | 1 cut(s) | 637 |
| BstV1I | GCAGC | 8 cut(s) | 90, 118, 160, 169, 172, 175, 178, 259 |
| BstV2I | GAAGAC | 1 cut(s) | 117 |
| BsuI | GTATCC | 2 cut(s) | 410, 886 |
| BsuRI | GGCC | 3 cut(s) | 238, 560, 1172 |
| BtgZI | GCGATG | 1 cut(s) | 1080 |
| BtrI | CACGTC | 1 cut(s) | 1477 |
| BtsCI | GGATG | 5 cut(s) | 889, 990, 1084, 1198, 1438 |
| BtsIMutI | CAGTG | 1 cut(s) | 850 |
| Cac8I | GCNNGC | 3 cut(s) | 74, 562, 1453 |
| CaiI | CAGNNNCTG | 1 cut(s) | 103 |
| CciI | TCATGA | 1 cut(s) | 436 |
| CfoI | GCGC | 4 cut(s) | 34, 121, 511, 1166 |
| Cfr10I | RCCGGY | 1 cut(s) | 560 |
| Cfr13I | GGNCC | 1 cut(s) | 802 |
| CseI | GACGC | 2 cut(s) | 300, 439 |
| Csp6I | GTAC | 1 cut(s) | 832 |
| CviAII | CATG | 5 cut(s) | 437, 622, 779, 806, 1010 |
| CviQI | GTAC | 1 cut(s) | 832 |
| DdeI | CTNAG | 7 cut(s) | 174, 201, 240, 252, 450, 1116, 1398 |
| DinI | GGCGCC | 1 cut(s) | 120 |
| DpnI | GATC | 4 cut(s) | 9, 754, 888, 1385 |
| DpnII | GATC | 4 cut(s) | 7, 752, 886, 1383 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 344 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 344 |
| EaeI | YGGCCR | 1 cut(s) | 1170 |
| Eam1104I | CTCTTC | 4 cut(s) | 185, 1026, 1284, 1457 |
| EarI | CTCTTC | 4 cut(s) | 185, 1026, 1284, 1457 |
| EciI | GGCGGA | 3 cut(s) | 333, 983, 997 |
| Eco130I | CCWWGG | 1 cut(s) | 521 |
| Eco47I | GGWCC | 1 cut(s) | 802 |
| Eco57I | CTGAAG | 1 cut(s) | 1374 |
| EcoRII | CCWGG | 3 cut(s) | 135, 721, 1455 |
| EcoT14I | CCWWGG | 1 cut(s) | 521 |
| EcoT22I | ATGCAT | 1 cut(s) | 1051 |
| EgeI | GGCGCC | 1 cut(s) | 120 |
| EheI | GGCGCC | 1 cut(s) | 120 |
| ErhI | CCWWGG | 1 cut(s) | 521 |
| FaeI | CATG | 5 cut(s) | 440, 625, 782, 809, 1013 |
| FaqI | GGGAC | 1 cut(s) | 332 |
| FatI | CATG | 5 cut(s) | 436, 621, 778, 805, 1009 |
| FauI | CCCGC | 2 cut(s) | 90, 630 |
| FauNDI | CATATG | 1 cut(s) | 1089 |
| FbaI | TGATCA | 1 cut(s) | 886 |
| FokI | GGATG | 5 cut(s) | 896, 997, 1091, 1205, 1445 |
| FspBI | CTAG | 1 cut(s) | 578 |
| GlaI | GCGC | 4 cut(s) | 33, 120, 510, 1165 |
| GsuI | CTGGAG | 2 cut(s) | 1305, 1478 |
| HaeII | RGCGCY | 2 cut(s) | 35, 122 |
| HaeIII | GGCC | 3 cut(s) | 238, 560, 1172 |
| HapII | CCGG | 4 cut(s) | 469, 561, 593, 602 |
| HgaI | GACGC | 2 cut(s) | 300, 439 |
| HhaI | GCGC | 4 cut(s) | 34, 121, 511, 1166 |
| Hin1I | GRCGYC | 1 cut(s) | 119 |
| Hin1II | CATG | 5 cut(s) | 440, 625, 782, 809, 1013 |
| Hin6I | GCGC | 4 cut(s) | 32, 119, 509, 1164 |
| HinP1I | GCGC | 4 cut(s) | 32, 119, 509, 1164 |
| HinfI | GANTC | 9 cut(s) | 25, 94, 193, 217, 454, 598, 706, 922, 1234 |
| HpaII | CCGG | 4 cut(s) | 469, 561, 593, 602 |
| HphI | GGTGA | 5 cut(s) | 607, 1115, 1264, 1378, 1424 |
| Hpy166II | GTNNAC | 1 cut(s) | 832 |
| Hpy188I | TCNGA | 6 cut(s) | 222, 372, 453, 927, 1078, 1536 |
| Hpy188III | TCNNGA | 8 cut(s) | 437, 823, 890, 949, 1115, 1137, 1322, 1387 |
| Hpy8I | GTNNAC | 1 cut(s) | 832 |
| Hpy99I | CGWCG | 2 cut(s) | 433, 1478 |
| HpyAV | CCTTC | 6 cut(s) | 307, 550, 642, 691, 928, 1423 |
| HpyCH4III | ACNGT | 3 cut(s) | 447, 845, 1506 |
| HpyCH4IV | ACGT | 1 cut(s) | 1476 |
| HpyCH4V | TGCA | 6 cut(s) | 106, 988, 1049, 1082, 1408, 1424 |
| HpyF3I | CTNAG | 7 cut(s) | 174, 201, 240, 252, 450, 1116, 1398 |
| HpySE526I | ACGT | 1 cut(s) | 1476 |
| Hsp92I | GRCGYC | 1 cut(s) | 119 |
| Hsp92II | CATG | 5 cut(s) | 440, 625, 782, 809, 1013 |
| HspAI | GCGC | 4 cut(s) | 32, 119, 509, 1164 |
| KasI | GGCGCC | 1 cut(s) | 118 |
| KroI | GCCGGC | 1 cut(s) | 560 |
| KroNI | GCCGGC | 1 cut(s) | 562 |
| Ksp22I | TGATCA | 1 cut(s) | 886 |
| Kzo9I | GATC | 4 cut(s) | 7, 752, 886, 1383 |
| LguI | GCTCTTC | 1 cut(s) | 1457 |
| LmnI | GCTCC | 1 cut(s) | 775 |
| Lsp1109I | GCAGC | 8 cut(s) | 90, 118, 160, 169, 172, 175, 178, 259 |
| LweI | GCATC | 2 cut(s) | 975, 1069 |
| MaeI | CTAG | 1 cut(s) | 578 |
| MaeII | ACGT | 1 cut(s) | 1476 |
| MaeIII | GTNAC | 4 cut(s) | 12, 441, 595, 1330 |
| MalI | GATC | 4 cut(s) | 9, 754, 888, 1385 |
| MboI | GATC | 4 cut(s) | 7, 752, 886, 1383 |
| MboII | GAAGA | 8 cut(s) | 117, 202, 565, 1043, 1223, 1301, 1367, 1474 |
| MfeI | CAATTG | 2 cut(s) | 298, 908 |
| MhlI | GDGCHC | 1 cut(s) | 1224 |
| MluCI | AATT | 8 cut(s) | 298, 352, 473, 838, 908, 1301, 1446, 1518 |
| Mly113I | GGCGCC | 1 cut(s) | 119 |
| MlyI | GAGTC | 3 cut(s) | 103, 202, 592 |
| MmeI | TCCRAC | 3 cut(s) | 268, 780, 1056 |
| Mph1103I | ATGCAT | 1 cut(s) | 1051 |
| MroNI | GCCGGC | 1 cut(s) | 560 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1233 |
| MseI | TTAA | 3 cut(s) | 495, 1305, 1403 |
| MslI | CAYNNNNRTG | 1 cut(s) | 620 |
| MspA1I | CMGCKG | 2 cut(s) | 19, 103 |
| MspI | CCGG | 4 cut(s) | 469, 561, 593, 602 |
| MspR9I | CCNGG | 4 cut(s) | 137, 469, 723, 1457 |
| MunI | CAATTG | 2 cut(s) | 298, 908 |
| Mva1269I | GAATGC | 1 cut(s) | 1426 |
| MvaI | CCWGG | 3 cut(s) | 137, 723, 1457 |
| MvnI | CGCG | 1 cut(s) | 637 |
| NaeI | GCCGGC | 1 cut(s) | 562 |
| NarI | GGCGCC | 1 cut(s) | 119 |
| NciI | CCSGG | 1 cut(s) | 469 |
| NdeI | CATATG | 1 cut(s) | 1089 |
| NdeII | GATC | 4 cut(s) | 7, 752, 886, 1383 |
| NgoMIV | GCCGGC | 1 cut(s) | 560 |
| NlaIII | CATG | 5 cut(s) | 440, 625, 782, 809, 1013 |
| NlaIV | GGNNCC | 2 cut(s) | 120, 1007 |
| NmeAIII | GCCGAG | 1 cut(s) | 1198 |
| NmuCI | GTSAC | 2 cut(s) | 12, 595 |
| NsiI | ATGCAT | 1 cut(s) | 1051 |
| NspI | RCATGY | 1 cut(s) | 782 |
| PagI | TCATGA | 1 cut(s) | 436 |
| PciSI | GCTCTTC | 1 cut(s) | 1457 |
| PctI | GAATGC | 1 cut(s) | 1426 |
| PdiI | GCCGGC | 1 cut(s) | 562 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1233 |
| PfeI | GAWTC | 6 cut(s) | 25, 217, 454, 706, 922, 1234 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1015 |
| PleI | GAGTC | 3 cut(s) | 102, 201, 592 |
| PluTI | GGCGCC | 1 cut(s) | 122 |
| PpsI | GAGTC | 3 cut(s) | 102, 201, 592 |
| Psp6I | CCWGG | 3 cut(s) | 135, 721, 1455 |
| PspGI | CCWGG | 3 cut(s) | 135, 721, 1455 |
| PspN4I | GGNNCC | 2 cut(s) | 120, 1007 |
| PspPI | GGNCC | 1 cut(s) | 802 |
| PstI | CTGCAG | 1 cut(s) | 108 |
| PstNI | CAGNNNCTG | 1 cut(s) | 103 |
| PvuII | CAGCTG | 1 cut(s) | 19 |
| RsaI | GTAC | 1 cut(s) | 833 |
| RsaNI | GTAC | 1 cut(s) | 832 |
| RseI | CAYNNNNRTG | 1 cut(s) | 620 |
| SapI | GCTCTTC | 1 cut(s) | 1457 |
| SaqAI | TTAA | 3 cut(s) | 495, 1305, 1403 |
| Sau3AI | GATC | 4 cut(s) | 7, 752, 886, 1383 |
| Sau96I | GGNCC | 1 cut(s) | 802 |
| SchI | GAGTC | 3 cut(s) | 103, 202, 592 |
| ScrFI | CCNGG | 4 cut(s) | 137, 469, 723, 1457 |
| SduI | GDGCHC | 1 cut(s) | 1224 |
| SfaNI | GCATC | 2 cut(s) | 975, 1069 |
| SfcI | CTRYAG | 1 cut(s) | 104 |
| SfoI | GGCGCC | 1 cut(s) | 120 |
| SinI | GGWCC | 1 cut(s) | 802 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 620 |
| SmlI | CTYRAG | 1 cut(s) | 60 |
| SmoI | CTYRAG | 1 cut(s) | 60 |
| SpeI | ACTAGT | 1 cut(s) | 577 |
| Sse9I | AATT | 8 cut(s) | 298, 352, 473, 838, 908, 1301, 1446, 1518 |
| SspDI | GGCGCC | 1 cut(s) | 118 |
| SspMI | CTAG | 1 cut(s) | 578 |
| StyD4I | CCNGG | 4 cut(s) | 135, 467, 721, 1455 |
| StyI | CCWWGG | 1 cut(s) | 521 |
| TaaI | ACNGT | 3 cut(s) | 447, 845, 1506 |
| TaiI | ACGT | 1 cut(s) | 1479 |
| TaqI | TCGA | 5 cut(s) | 457, 692, 755, 822, 1136 |
| TaqII | GACCGA | 1 cut(s) | 705 |
| TasI | AATT | 8 cut(s) | 298, 352, 473, 838, 908, 1301, 1446, 1518 |
| TauI | GCSGC | 6 cut(s) | 79, 103, 247, 263, 274, 277 |
| TfiI | GAWTC | 6 cut(s) | 25, 217, 454, 706, 922, 1234 |
| Tru1I | TTAA | 3 cut(s) | 495, 1305, 1403 |
| Tru9I | TTAA | 3 cut(s) | 495, 1305, 1403 |
| TscAI | CASTG | 1 cut(s) | 850 |
| TseFI | GTSAC | 2 cut(s) | 12, 595 |
| TseI | GCWGC | 8 cut(s) | 103, 106, 148, 157, 160, 163, 166, 247 |
| Tsp45I | GTSAC | 2 cut(s) | 12, 595 |
| TspGWI | ACGGA | 1 cut(s) | 350 |
| TspRI | CASTG | 1 cut(s) | 850 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1015 |
| VpaK11BI | GGWCC | 1 cut(s) | 802 |
| XapI | RAATTY | 2 cut(s) | 473, 1301 |
| XceI | RCATGY | 1 cut(s) | 782 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1233 |
| XspI | CTAG | 1 cut(s) | 578 |
| Zsp2I | ATGCAT | 1 cut(s) | 1051 |