PRLI-interacting factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G19900 AT5G19900 AT5G19900 AT5G19900 AT5G19900 |
| fragaria_vesca | FvH4_3g44330 FvH4_3g44330 |
| malus_domestica | MD03G1014800.v1.1 MD11G1016000.v1.1 |
| prunus_persica | Prupe.6G014100_v2.0.a1 |
| pyrus_communis | pycom03g01240 pycom11g01120 |
| rosa_chinensis | RchiOBHm_Chr5g0080701 |
| rosa_laevigata | RLG00000036887 |
| rosa_multiflora | Rmu_sc0002380.1_g000013 Rmu_sc0027070.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00002720 |
| rosa_rugosa | Rorug05G0471700 Rorug05G0471700 |
| rosa_samantha | Rh5AG524800 Rh5BG546900 Rh5CG570300 Rh5DG557100 |
| rosa_wichuraiana | Rw5G048670 Rw5G049240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 592 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1238 |
| AatII | GACGTC | 1 cut(s) | 518 |
| Acc36I | ACCTGC | 1 cut(s) | 592 |
| AccB1I | GGYRCC | 3 cut(s) | 299, 993, 1151 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 365, 1003 |
| AccII | CGCG | 1 cut(s) | 245 |
| AciI | CCGC | 8 cut(s) | 80, 98, 134, 245, 381, 546, 697, 1210 |
| AclI | AACGTT | 1 cut(s) | 852 |
| AclWI | GGATC | 1 cut(s) | 1045 |
| AcsI | RAATTY | 1 cut(s) | 455 |
| AcyI | GRCGYC | 1 cut(s) | 515 |
| AdeI | CACNNNGTG | 1 cut(s) | 365 |
| AfaI | GTAC | 1 cut(s) | 401 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 309, 365, 1003 |
| AflIII | ACRYGT | 1 cut(s) | 1171 |
| AgsI | TTSAA | 3 cut(s) | 196, 922, 1217 |
| AjiI | CACGTC | 1 cut(s) | 757 |
| AjnI | CCWGG | 1 cut(s) | 703 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1329, 1361 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 500, 532 |
| AluBI | AGCT | 4 cut(s) | 19, 235, 893, 1327 |
| AluI | AGCT | 4 cut(s) | 19, 235, 893, 1327 |
| Alw26I | GTCTC | 1 cut(s) | 183 |
| AlwI | GGATC | 1 cut(s) | 1045 |
| AoxI | GGCC | 3 cut(s) | 215, 246, 389 |
| ApeKI | GCWGC | 7 cut(s) | 16, 142, 145, 148, 151, 154, 694 |
| ApoI | RAATTY | 1 cut(s) | 455 |
| AspLEI | GCGC | 1 cut(s) | 34 |
| AspS9I | GGNCC | 4 cut(s) | 247, 389, 790, 1389 |
| AsuC2I | CCSGG | 3 cut(s) | 393, 451, 575 |
| AsuHPI | GGTGA | 6 cut(s) | 589, 603, 1307, 1387, 1430, 1435 |
| AvaII | GGWCC | 2 cut(s) | 790, 1389 |
| BaeGI | GKGCMC | 2 cut(s) | 302, 1463 |
| BanI | GGYRCC | 3 cut(s) | 299, 993, 1151 |
| BbsI | GAAGAC | 1 cut(s) | 1206 |
| BbvCI | CCTCAGC | 4 cut(s) | 219, 225, 231, 1104 |
| BbvI | GCAGC | 7 cut(s) | 28, 154, 157, 160, 163, 166, 681 |
| BccI | CCATC | 4 cut(s) | 656, 934, 1049, 1124 |
| BceAI | ACGGC | 1 cut(s) | 169 |
| BciT130I | CCWGG | 1 cut(s) | 705 |
| BciVI | GTATCC | 1 cut(s) | 874 |
| BclI | TGATCA | 1 cut(s) | 874 |
| BcnI | CCSGG | 3 cut(s) | 393, 451, 575 |
| BcoDI | GTCTC | 1 cut(s) | 183 |
| BfmI | CTRYAG | 2 cut(s) | 236, 829 |
| BfoI | RGCGCY | 1 cut(s) | 35 |
| BfuAI | ACCTGC | 1 cut(s) | 592 |
| BfuI | GTATCC | 1 cut(s) | 874 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 134 |
| BlpI | GCTNAGC | 1 cut(s) | 138 |
| Bme1390I | CCNGG | 4 cut(s) | 393, 451, 575, 705 |
| Bme18I | GGWCC | 2 cut(s) | 790, 1389 |
| BmgBI | CACGTC | 1 cut(s) | 757 |
| BmgT120I | GGNCC | 4 cut(s) | 247, 389, 790, 1389 |
| BmiI | GGNNCC | 4 cut(s) | 301, 995, 1153, 1390 |
| BmrFI | CCNGG | 4 cut(s) | 393, 451, 575, 705 |
| BmsI | GCATC | 2 cut(s) | 66, 963 |
| BpiI | GAAGAC | 1 cut(s) | 1206 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 163, 195 |
| Bpu10I | CCTNAGC | 4 cut(s) | 219, 225, 231, 1104 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 138 |
| BpuEI | CTTGAG | 3 cut(s) | 108, 982, 1004 |
| BpuMI | CCSGG | 3 cut(s) | 393, 451, 575 |
| BsaHI | GRCGYC | 1 cut(s) | 515 |
| BsaJI | CCNNGG | 4 cut(s) | 52, 129, 503, 1155 |
| BsaWI | WCCGGW | 1 cut(s) | 1333 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 770, 800, 935, 965 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 309, 365, 1003 |
| Bse1I | ACTGG | 1 cut(s) | 375 |
| Bse3DI | GCAATG | 1 cut(s) | 1105 |
| BseBI | CCWGG | 1 cut(s) | 705 |
| BseDI | CCNNGG | 4 cut(s) | 52, 129, 503, 1155 |
| BseGI | GGATG | 3 cut(s) | 877, 978, 1444 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 309, 365, 1003 |
| BseMI | GCAATG | 1 cut(s) | 1105 |
| BseMII | CTCAG | 9 cut(s) | 116, 152, 194, 233, 239, 245, 1032, 1095, 1152 |
| BseNI | ACTGG | 1 cut(s) | 375 |
| BseRI | GAGGAG | 9 cut(s) | 399, 662, 776, 796, 979, 982, 1003, 1022, 1034 |
| BseSI | GKGCMC | 2 cut(s) | 302, 1463 |
| BseXI | GCAGC | 7 cut(s) | 28, 154, 157, 160, 163, 166, 681 |
| Bsh1236I | CGCG | 1 cut(s) | 245 |
| Bsh1285I | CGRYCG | 1 cut(s) | 701 |
| BshFI | GGCC | 3 cut(s) | 217, 248, 391 |
| BshNI | GGYRCC | 3 cut(s) | 299, 993, 1151 |
| BsiEI | CGRYCG | 1 cut(s) | 701 |
| BsiSI | CCGG | 5 cut(s) | 392, 451, 543, 575, 1334 |
| BslFI | GGGAC | 4 cut(s) | 332, 971, 1193, 1402 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 309, 365, 1003 |
| BsmAI | GTCTC | 1 cut(s) | 183 |
| BsmFI | GGGAC | 4 cut(s) | 332, 971, 1193, 1402 |
| BsmI | GAATGC | 1 cut(s) | 1432 |
| BsnI | GGCC | 3 cut(s) | 217, 248, 391 |
| Bsp1286I | GDGCHC | 2 cut(s) | 302, 1463 |
| Bsp143I | GATC | 3 cut(s) | 7, 874, 1037 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 138 |
| Bsp19I | CCATGG | 1 cut(s) | 129 |
| BspACI | CCGC | 8 cut(s) | 80, 98, 134, 245, 381, 546, 697, 1210 |
| BspANI | GGCC | 3 cut(s) | 217, 248, 391 |
| BspCNI | CTCAG | 9 cut(s) | 115, 151, 193, 232, 238, 244, 1033, 1096, 1153 |
| BspFNI | CGCG | 1 cut(s) | 245 |
| BspHI | TCATGA | 2 cut(s) | 63, 418 |
| BspLI | GGNNCC | 4 cut(s) | 301, 995, 1153, 1390 |
| BspMI | ACCTGC | 1 cut(s) | 592 |
| BspPI | GGATC | 1 cut(s) | 1045 |
| BspQI | GCTCTTC | 1 cut(s) | 1463 |
| BspT107I | GGYRCC | 3 cut(s) | 299, 993, 1151 |
| BsrDI | GCAATG | 1 cut(s) | 1105 |
| BsrI | ACTGG | 1 cut(s) | 375 |
| BssECI | CCNNGG | 4 cut(s) | 52, 129, 503, 1155 |
| BssMI | GATC | 3 cut(s) | 7, 874, 1037 |
| BssNI | GRCGYC | 1 cut(s) | 515 |
| BssT1I | CCWWGG | 4 cut(s) | 52, 129, 503, 1155 |
| Bst2UI | CCWGG | 1 cut(s) | 705 |
| Bst4CI | ACNGT | 6 cut(s) | 117, 240, 429, 615, 833, 1484 |
| Bst6I | CTCTTC | 4 cut(s) | 164, 720, 900, 1463 |
| BstACI | GRCGYC | 1 cut(s) | 515 |
| BstC8I | GCNNGC | 4 cut(s) | 71, 95, 1210, 1459 |
| BstDEI | CTNAG | 9 cut(s) | 102, 138, 180, 219, 225, 231, 1041, 1104, 1161 |
| BstDSI | CCRYGG | 1 cut(s) | 129 |
| BstF5I | GGATG | 3 cut(s) | 877, 978, 1444 |
| BstFNI | CGCG | 1 cut(s) | 245 |
| BstH2I | RGCGCY | 1 cut(s) | 35 |
| BstHHI | GCGC | 1 cut(s) | 34 |
| BstKTI | GATC | 3 cut(s) | 10, 877, 1040 |
| BstMAI | GTCTC | 1 cut(s) | 183 |
| BstMBI | GATC | 3 cut(s) | 7, 874, 1037 |
| BstMCI | CGRYCG | 1 cut(s) | 701 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 79, 134, 148, 151, 154, 297, 497, 565, 700 |
| BstNI | CCWGG | 1 cut(s) | 705 |
| BstNSI | RCATGY | 1 cut(s) | 770 |
| BstSCI | CCNGG | 4 cut(s) | 391, 449, 573, 703 |
| BstSFI | CTRYAG | 2 cut(s) | 236, 829 |
| BstSLI | GKGCMC | 2 cut(s) | 302, 1463 |
| BstUI | CGCG | 1 cut(s) | 245 |
| BstV1I | GCAGC | 7 cut(s) | 28, 154, 157, 160, 163, 166, 681 |
| BstV2I | GAAGAC | 1 cut(s) | 1206 |
| BstX2I | RGATCY | 1 cut(s) | 1037 |
| BstYI | RGATCY | 1 cut(s) | 1037 |
| BsuI | GTATCC | 1 cut(s) | 874 |
| BsuRI | GGCC | 3 cut(s) | 217, 248, 391 |
| BtgI | CCRYGG | 1 cut(s) | 129 |
| BtrI | CACGTC | 1 cut(s) | 757 |
| BtsCI | GGATG | 3 cut(s) | 877, 978, 1444 |
| BtsIMutI | CAGTG | 1 cut(s) | 838 |
| BveI | ACCTGC | 1 cut(s) | 592 |
| Cac8I | GCNNGC | 4 cut(s) | 71, 95, 1210, 1459 |
| CciI | TCATGA | 2 cut(s) | 63, 418 |
| CfoI | GCGC | 1 cut(s) | 34 |
| Cfr13I | GGNCC | 4 cut(s) | 247, 389, 790, 1389 |
| CseI | GACGC | 1 cut(s) | 282 |
| Csp6I | GTAC | 1 cut(s) | 400 |
| CviAII | CATG | 6 cut(s) | 64, 130, 419, 767, 794, 998 |
| CviQI | GTAC | 1 cut(s) | 400 |
| DdeI | CTNAG | 9 cut(s) | 102, 138, 180, 219, 225, 231, 1041, 1104, 1161 |
| DpnI | GATC | 3 cut(s) | 9, 876, 1039 |
| DpnII | GATC | 3 cut(s) | 7, 874, 1037 |
| DraI | TTTAAA | 1 cut(s) | 1227 |
| DraIII | CACNNNGTG | 1 cut(s) | 365 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1238 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1238 |
| Eam1104I | CTCTTC | 4 cut(s) | 164, 720, 900, 1463 |
| EarI | CTCTTC | 4 cut(s) | 164, 720, 900, 1463 |
| Eco130I | CCWWGG | 4 cut(s) | 52, 129, 503, 1155 |
| Eco47I | GGWCC | 2 cut(s) | 790, 1389 |
| EcoRII | CCWGG | 1 cut(s) | 703 |
| EcoT14I | CCWWGG | 4 cut(s) | 52, 129, 503, 1155 |
| ErhI | CCWWGG | 4 cut(s) | 52, 129, 503, 1155 |
| FaeI | CATG | 6 cut(s) | 67, 133, 422, 770, 797, 1001 |
| FaqI | GGGAC | 4 cut(s) | 332, 971, 1193, 1402 |
| FatI | CATG | 6 cut(s) | 63, 129, 418, 766, 793, 997 |
| FauI | CCCGC | 1 cut(s) | 1217 |
| FauNDI | CATATG | 1 cut(s) | 1077 |
| FbaI | TGATCA | 1 cut(s) | 874 |
| FokI | GGATG | 3 cut(s) | 884, 985, 1451 |
| GlaI | GCGC | 1 cut(s) | 33 |
| HaeII | RGCGCY | 1 cut(s) | 35 |
| HaeIII | GGCC | 3 cut(s) | 217, 248, 391 |
| HapII | CCGG | 5 cut(s) | 392, 451, 543, 575, 1334 |
| HgaI | GACGC | 1 cut(s) | 282 |
| HhaI | GCGC | 1 cut(s) | 34 |
| Hin1I | GRCGYC | 1 cut(s) | 515 |
| Hin1II | CATG | 6 cut(s) | 67, 133, 422, 770, 797, 1001 |
| Hin6I | GCGC | 1 cut(s) | 32 |
| HinP1I | GCGC | 1 cut(s) | 32 |
| HinfI | GANTC | 8 cut(s) | 25, 172, 265, 337, 436, 802, 862, 910 |
| HpaII | CCGG | 5 cut(s) | 392, 451, 543, 575, 1334 |
| HphI | GGTGA | 6 cut(s) | 589, 603, 1307, 1387, 1430, 1435 |
| Hpy188I | TCNGA | 8 cut(s) | 105, 272, 342, 372, 530, 915, 1042, 1066 |
| Hpy188III | TCNNGA | 6 cut(s) | 64, 419, 878, 937, 983, 1125 |
| Hpy99I | CGWCG | 4 cut(s) | 265, 517, 619, 1484 |
| HpyAV | CCTTC | 8 cut(s) | 289, 529, 637, 673, 916, 1082, 1307, 1429 |
| HpyCH4III | ACNGT | 6 cut(s) | 117, 240, 429, 615, 833, 1484 |
| HpyCH4IV | ACGT | 5 cut(s) | 515, 756, 852, 1171, 1182 |
| HpyCH4V | TGCA | 2 cut(s) | 976, 1414 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 79, 134, 148, 151, 154, 297, 497, 565, 700 |
| HpyF3I | CTNAG | 9 cut(s) | 102, 138, 180, 219, 225, 231, 1041, 1104, 1161 |
| HpySE526I | ACGT | 5 cut(s) | 515, 756, 852, 1171, 1182 |
| Hsp92I | GRCGYC | 1 cut(s) | 515 |
| Hsp92II | CATG | 6 cut(s) | 67, 133, 422, 770, 797, 1001 |
| HspAI | GCGC | 1 cut(s) | 32 |
| Ksp22I | TGATCA | 1 cut(s) | 874 |
| Kzo9I | GATC | 3 cut(s) | 7, 874, 1037 |
| LguI | GCTCTTC | 1 cut(s) | 1463 |
| LmnI | GCTCC | 1 cut(s) | 763 |
| Lsp1109I | GCAGC | 7 cut(s) | 28, 154, 157, 160, 163, 166, 681 |
| LweI | GCATC | 2 cut(s) | 66, 963 |
| MaeII | ACGT | 5 cut(s) | 515, 756, 852, 1171, 1182 |
| MaeIII | GTNAC | 6 cut(s) | 111, 423, 577, 752, 1295, 1484 |
| MalI | GATC | 3 cut(s) | 9, 876, 1039 |
| MboI | GATC | 3 cut(s) | 7, 874, 1037 |
| MfeI | CAATTG | 2 cut(s) | 280, 896 |
| MflI | RGATCY | 1 cut(s) | 1037 |
| MhlI | GDGCHC | 2 cut(s) | 302, 1463 |
| MluCI | AATT | 6 cut(s) | 280, 352, 455, 896, 1344, 1452 |
| MlyI | GAGTC | 2 cut(s) | 181, 811 |
| MmeI | TCCRAC | 1 cut(s) | 768 |
| MseI | TTAA | 5 cut(s) | 477, 1226, 1266, 1365, 1409 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1217 |
| MspA1I | CMGCKG | 1 cut(s) | 19 |
| MspI | CCGG | 5 cut(s) | 392, 451, 543, 575, 1334 |
| MspR9I | CCNGG | 4 cut(s) | 393, 451, 575, 705 |
| MunI | CAATTG | 2 cut(s) | 280, 896 |
| Mva1269I | GAATGC | 1 cut(s) | 1432 |
| MvaI | CCWGG | 1 cut(s) | 705 |
| MvnI | CGCG | 1 cut(s) | 245 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 79, 134, 148, 151, 154, 297, 497, 565, 700 |
| NciI | CCSGG | 3 cut(s) | 393, 451, 575 |
| NcoI | CCATGG | 1 cut(s) | 129 |
| NdeI | CATATG | 1 cut(s) | 1077 |
| NdeII | GATC | 3 cut(s) | 7, 874, 1037 |
| NlaIII | CATG | 6 cut(s) | 67, 133, 422, 770, 797, 1001 |
| NlaIV | GGNNCC | 4 cut(s) | 301, 995, 1153, 1390 |
| NmuCI | GTSAC | 5 cut(s) | 111, 577, 752, 1295, 1484 |
| NspI | RCATGY | 1 cut(s) | 770 |
| PagI | TCATGA | 2 cut(s) | 63, 418 |
| PaqCI | CACCTGC | 1 cut(s) | 592 |
| PciSI | GCTCTTC | 1 cut(s) | 1463 |
| PctI | GAATGC | 1 cut(s) | 1432 |
| PfeI | GAWTC | 6 cut(s) | 25, 265, 337, 436, 862, 910 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 365, 1003 |
| PleI | GAGTC | 2 cut(s) | 180, 810 |
| PpsI | GAGTC | 2 cut(s) | 180, 810 |
| Psp1406I | AACGTT | 1 cut(s) | 852 |
| Psp6I | CCWGG | 1 cut(s) | 703 |
| PspGI | CCWGG | 1 cut(s) | 703 |
| PspN4I | GGNNCC | 4 cut(s) | 301, 995, 1153, 1390 |
| PspPI | GGNCC | 4 cut(s) | 247, 389, 790, 1389 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 188, 220 |
| PsuI | RGATCY | 1 cut(s) | 1037 |
| PvuII | CAGCTG | 1 cut(s) | 19 |
| RsaI | GTAC | 1 cut(s) | 401 |
| RsaNI | GTAC | 1 cut(s) | 400 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1217 |
| SapI | GCTCTTC | 1 cut(s) | 1463 |
| SaqAI | TTAA | 5 cut(s) | 477, 1226, 1266, 1365, 1409 |
| Sau3AI | GATC | 3 cut(s) | 7, 874, 1037 |
| Sau96I | GGNCC | 4 cut(s) | 247, 389, 790, 1389 |
| SchI | GAGTC | 2 cut(s) | 181, 811 |
| ScrFI | CCNGG | 4 cut(s) | 393, 451, 575, 705 |
| SduI | GDGCHC | 2 cut(s) | 302, 1463 |
| SfaNI | GCATC | 2 cut(s) | 66, 963 |
| SfcI | CTRYAG | 2 cut(s) | 236, 829 |
| SinI | GGWCC | 2 cut(s) | 790, 1389 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1217 |
| SmlI | CTYRAG | 3 cut(s) | 123, 961, 983 |
| SmoI | CTYRAG | 3 cut(s) | 123, 961, 983 |
| Sse9I | AATT | 6 cut(s) | 280, 352, 455, 896, 1344, 1452 |
| SsiI | CCGC | 8 cut(s) | 80, 98, 134, 245, 381, 546, 697, 1210 |
| StyD4I | CCNGG | 4 cut(s) | 391, 449, 573, 703 |
| StyI | CCWWGG | 4 cut(s) | 52, 129, 503, 1155 |
| TaaI | ACNGT | 6 cut(s) | 117, 240, 429, 615, 833, 1484 |
| TaiI | ACGT | 5 cut(s) | 518, 759, 855, 1174, 1185 |
| TaqI | TCGA | 4 cut(s) | 263, 439, 617, 865 |
| TasI | AATT | 6 cut(s) | 280, 352, 455, 896, 1344, 1452 |
| TauI | GCSGC | 5 cut(s) | 82, 100, 137, 248, 549 |
| TfiI | GAWTC | 6 cut(s) | 25, 265, 337, 436, 862, 910 |
| Tru1I | TTAA | 5 cut(s) | 477, 1226, 1266, 1365, 1409 |
| Tru9I | TTAA | 5 cut(s) | 477, 1226, 1266, 1365, 1409 |
| TscAI | CASTG | 1 cut(s) | 838 |
| TseFI | GTSAC | 5 cut(s) | 111, 577, 752, 1295, 1484 |
| TseI | GCWGC | 7 cut(s) | 16, 142, 145, 148, 151, 154, 694 |
| Tsp45I | GTSAC | 5 cut(s) | 111, 577, 752, 1295, 1484 |
| TspGWI | ACGGA | 1 cut(s) | 249 |
| TspRI | CASTG | 1 cut(s) | 838 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 365, 1003 |
| VpaK11BI | GGWCC | 2 cut(s) | 790, 1389 |
| XapI | RAATTY | 1 cut(s) | 455 |
| XceI | RCATGY | 1 cut(s) | 770 |
| ZraI | GACGTC | 1 cut(s) | 516 |