MD11G1296300.v1.1

Aldo-keto reductase-like isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0006387
Physical Location & Seq
Forward (+)
41403080 .. 41406467
3388 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1296300.v1.1.491

Sequence Viewer

Length: 1074 bp
ATGGCGGTGCCGCTCGTTAACCTCGCACCGAATCTAACAGTCTCAAAGCTCTGCTTGGGGACGATGACTTTCGGCGAGCAAAACTCGTTGCCCGAGTCATTTCGGCTCCTCGGCGGAGCTCTCGAGGCCGGAATCAACTTCTTCGACTCGGCAGAAATGTACCCGGTGGTTCAGCGAGCAGAGACTCAGGGTAGGAGCGAGGAGTACCTCGGCCGTTGGATTAGAGTGAGCAAAATCCCTCGAGACAGCGTCATTTTGGCCACCAAGGTTACGGGACCCTCTGGGCAGATGACTTGGATTCGAGATGGCCCCAAGTGTTTGGATGCCAGGAATATCGCCGATGCCATTGACGGCAGTTTAAGGAGATTGCAGACGGATTACATTGATCTTTATCAGATTCATTGGCCCGATCGCTATGTTCCCATGTTTGGAGAAACTGAATATGATCCAACCCGACAGTTTTGTTCGATTCCTATAGAGGAACAGCTGGATGCTCTTGGGAGAGCCGTTGATTCGGGTAAGATCAGATATGTTGGTCTTAGTAATGAAACACCGTACGGTGTCATGAAGTTTGTTCAGGTGGCTGAAAGGAGCACTTACCGTCCAAAGATTGTGTCTCTGCAGAACGCATACAGCTTGCTCTGCCGAACTTTTGATTCTGGATTGGCTGAATGCTGTCATCATGAGAGGATCAGTTTACTAGCTTATAGCCCCCTTGCAATGGGTATACTCTCTGGGAAGTATTTTTCGCCTGATGGGGGTCCACCAGATGCTCGGTTGAATGTTTTTAGAGGGAAATATTCGGAAGGGGAATCCAGATACAACCTGTCTAATCACATCATAAGAGCAGCAGCCCTGGAATACATTAAGATTGCAGAAAAGTACATTCTTCATCCAGTATCTCTTGCAATAGCCTTTGTTTTGAGTCGCTCCCTCGTTGCAAGTGTTGTTTTTGGAGCAACCAAGTCATGGCAACTTCAAGAGGTTCTAGATGGATGCAAGGTCGAGCTCACACCAGAAGTAATCGCGGAAATTAACAAGGTTCATGAGAGGGTTCCGAATCCATGCCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

358

Amino Acids

39.79

Weight (kDa)

6.34

Isoelectric Point (pI)

42.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 16 - 349 8e-67 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 7
AccB7I CCANNNNNTGG 1 cut(s) 969
AccBSI CCGCTC 1 cut(s) 13
AccI GTMKAC 1 cut(s) 727
AccII CGCG 1 cut(s) 1028
AciI CCGC 4 cut(s) 5, 11, 114, 1028
AclWI GGATC 2 cut(s) 440, 698
AcoI YGGCCR 2 cut(s) 211, 258
AfaI GTAC 4 cut(s) 161, 206, 557, 884
AfiI CCNNNNNNNGG 4 cut(s) 428, 721, 758, 969
AgsI TTSAA 2 cut(s) 781, 980
AjnI CCWGG 2 cut(s) 326, 855
AluBI AGCT 6 cut(s) 49, 119, 487, 636, 704, 1009
AluI AGCT 6 cut(s) 49, 119, 487, 636, 704, 1009
Alw21I GWGCWC 3 cut(s) 121, 596, 1011
Alw26I GTCTC 4 cut(s) 46, 176, 237, 621
AlwI GGATC 2 cut(s) 440, 698
Ama87I CYCGRG 3 cut(s) 92, 122, 240
AoxI GGCC 5 cut(s) 126, 211, 258, 307, 404
ApeKI GCWGC 2 cut(s) 848, 851
ArsI GACNNNNNNTTYG 2 cut(s) 599, 631
AspS9I GGNCC 4 cut(s) 275, 308, 405, 761
AsuC2I CCSGG 1 cut(s) 164
AvaI CYCGRG 3 cut(s) 92, 122, 240
AvaII GGWCC 2 cut(s) 275, 761
BalI TGGCCA 1 cut(s) 260
BanI GGYRCC 1 cut(s) 7
BanII GRGCYC 2 cut(s) 121, 1011
Bbv12I GWGCWC 3 cut(s) 121, 596, 1011
BbvI GCAGC 2 cut(s) 860, 863
BccI CCATC 3 cut(s) 299, 749, 986
BceAI ACGGC 3 cut(s) 198, 367, 491
BciT130I CCWGG 2 cut(s) 328, 857
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 4 cut(s) 46, 176, 237, 621
BfaI CTAG 2 cut(s) 701, 989
BfmI CTRYAG 2 cut(s) 474, 620
BisI GCNGC 3 cut(s) 11, 849, 852
BlsI GCNGC 3 cut(s) 12, 850, 853
Bme1390I CCNGG 3 cut(s) 164, 328, 857
Bme18I GGWCC 2 cut(s) 275, 761
BmeT110I CYCGRG 3 cut(s) 92, 122, 240
BmgT120I GGNCC 4 cut(s) 275, 308, 405, 761
BmiI GGNNCC 7 cut(s) 9, 107, 276, 277, 310, 762, 1056
BmrFI CCNGG 3 cut(s) 164, 328, 857
BmsI GCATC 5 cut(s) 313, 331, 481, 760, 986
BplI GAGNNNNNCTC 2 cut(s) 68, 100
BpuMI CCSGG 1 cut(s) 164
BsaBI GATNNNNATC 1 cut(s) 390
BsaJI CCNNGG 4 cut(s) 109, 208, 264, 855
Bsc4I CCNNNNNNNGG 4 cut(s) 428, 721, 758, 969
Bse1I ACTGG 1 cut(s) 896
Bse3DI GCAATG 1 cut(s) 726
Bse8I GATNNNNATC 1 cut(s) 390
BseBI CCWGG 2 cut(s) 328, 857
BseDI CCNNGG 4 cut(s) 109, 208, 264, 855
BseGI GGATG 4 cut(s) 328, 496, 892, 1001
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 4 cut(s) 428, 721, 758, 969
BseMI GCAATG 1 cut(s) 726
BseMII CTCAG 1 cut(s) 200
BseNI ACTGG 1 cut(s) 896
BseRI GAGGAG 2 cut(s) 98, 215
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 2 cut(s) 860, 863
Bsh1236I CGCG 1 cut(s) 1028
Bsh1285I CGRYCG 2 cut(s) 214, 412
BshFI GGCC 5 cut(s) 128, 213, 260, 309, 406
BshNI GGYRCC 1 cut(s) 7
BsiEI CGRYCG 2 cut(s) 214, 412
BsiHKAI GWGCWC 3 cut(s) 121, 596, 1011
BsiHKCI CYCGRG 3 cut(s) 92, 122, 240
BsiSI CCGG 2 cut(s) 129, 164
BsiWI CGTACG 1 cut(s) 555
BslFI GGGAC 2 cut(s) 73, 288
BslI CCNNNNNNNGG 4 cut(s) 428, 721, 758, 969
BsmAI GTCTC 4 cut(s) 46, 176, 237, 621
BsmFI GGGAC 2 cut(s) 73, 288
BsmI GAATGC 1 cut(s) 677
BsnI GGCC 5 cut(s) 128, 213, 260, 309, 406
BsoBI CYCGRG 3 cut(s) 92, 122, 240
Bsp1286I GDGCHC 3 cut(s) 121, 596, 1011
Bsp143I GATC 5 cut(s) 385, 409, 445, 522, 690
BspACI CCGC 4 cut(s) 5, 11, 114, 1028
BspANI GGCC 5 cut(s) 128, 213, 260, 309, 406
BspCNI CTCAG 1 cut(s) 199
BspFNI CGCG 1 cut(s) 1028
BspHI TCATGA 3 cut(s) 564, 682, 1045
BspLI GGNNCC 7 cut(s) 9, 107, 276, 277, 310, 762, 1056
BspMAI CTGCAG 1 cut(s) 624
BspPI GGATC 2 cut(s) 440, 698
BspT107I GGYRCC 1 cut(s) 7
BsrBI CCGCTC 1 cut(s) 13
BsrDI GCAATG 1 cut(s) 726
BsrI ACTGG 1 cut(s) 896
BssECI CCNNGG 4 cut(s) 109, 208, 264, 855
BssMI GATC 5 cut(s) 385, 409, 445, 522, 690
BssNAI GTATAC 1 cut(s) 728
BssT1I CCWWGG 1 cut(s) 264
Bst1107I GTATAC 1 cut(s) 728
Bst2UI CCWGG 2 cut(s) 328, 857
Bst4CI ACNGT 5 cut(s) 40, 459, 555, 560, 602
BstC8I GCNNGC 3 cut(s) 77, 177, 638
BstDEI CTNAG 2 cut(s) 186, 539
BstF5I GGATG 4 cut(s) 328, 496, 892, 1001
BstFNI CGCG 1 cut(s) 1028
BstKTI GATC 5 cut(s) 388, 412, 448, 525, 693
BstMAI GTCTC 4 cut(s) 46, 176, 237, 621
BstMBI GATC 5 cut(s) 385, 409, 445, 522, 690
BstMCI CGRYCG 2 cut(s) 214, 412
BstMWI GCNNNNNNNGC 2 cut(s) 125, 642
BstNI CCWGG 2 cut(s) 328, 857
BstSCI CCNGG 3 cut(s) 162, 326, 855
BstSFI CTRYAG 2 cut(s) 474, 620
BstUI CGCG 1 cut(s) 1028
BstV1I GCAGC 2 cut(s) 860, 863
BstXI CCANNNNNNTGG 1 cut(s) 319
BstZ17I GTATAC 1 cut(s) 728
BstZI CGGCCG 1 cut(s) 211
BsuRI GGCC 5 cut(s) 128, 213, 260, 309, 406
BtsCI GGATG 4 cut(s) 328, 496, 892, 1001
Cac8I GCNNGC 3 cut(s) 77, 177, 638
CciI TCATGA 3 cut(s) 564, 682, 1045
Cfr13I GGNCC 4 cut(s) 275, 308, 405, 761
CseI GACGC 1 cut(s) 238
Csp6I GTAC 4 cut(s) 160, 205, 556, 883
CviAII CATG 6 cut(s) 424, 565, 683, 969, 1046, 1065
CviQI GTAC 4 cut(s) 160, 205, 556, 883
DdeI CTNAG 2 cut(s) 186, 539
DpnI GATC 5 cut(s) 387, 411, 447, 524, 692
DpnII GATC 5 cut(s) 385, 409, 445, 522, 690
EaeI YGGCCR 2 cut(s) 211, 258
EagI CGGCCG 1 cut(s) 211
EciI GGCGGA 1 cut(s) 129
Ecl136II GAGCTC 2 cut(s) 119, 1009
EclXI CGGCCG 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 264
Eco24I GRGCYC 2 cut(s) 121, 1011
Eco47I GGWCC 2 cut(s) 275, 761
Eco52I CGGCCG 1 cut(s) 211
Eco53kI GAGCTC 2 cut(s) 119, 1009
Eco88I CYCGRG 3 cut(s) 92, 122, 240
EcoICRI GAGCTC 2 cut(s) 119, 1009
EcoO109I RGGNCCY 1 cut(s) 275
EcoRII CCWGG 2 cut(s) 326, 855
EcoT14I CCWWGG 1 cut(s) 264
EcoT38I GRGCYC 2 cut(s) 121, 1011
ErhI CCWWGG 1 cut(s) 264
FaeI CATG 6 cut(s) 427, 568, 686, 972, 1049, 1068
FalI AAGNNNNNCTT 4 cut(s) 38, 70, 580, 612
FaqI GGGAC 2 cut(s) 73, 288
FatI CATG 6 cut(s) 423, 564, 682, 968, 1045, 1064
FblI GTMKAC 1 cut(s) 727
Fnu4HI GCNGC 3 cut(s) 11, 849, 852
FokI GGATG 4 cut(s) 335, 503, 879, 1008
FriOI GRGCYC 2 cut(s) 121, 1011
Fsp4HI GCNGC 3 cut(s) 11, 849, 852
FspBI CTAG 2 cut(s) 701, 989
GluI GCNGC 3 cut(s) 11, 849, 852
HaeIII GGCC 5 cut(s) 128, 213, 260, 309, 406
HapII CCGG 2 cut(s) 129, 164
HgaI GACGC 1 cut(s) 238
Hin1II CATG 6 cut(s) 427, 568, 686, 972, 1049, 1068
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HpaI GTTAAC 1 cut(s) 19
HpaII CCGG 2 cut(s) 129, 164
Hpy166II GTNNAC 4 cut(s) 19, 698, 728, 764
Hpy188I TCNGA 4 cut(s) 396, 527, 805, 1059
Hpy8I GTNNAC 4 cut(s) 19, 698, 728, 764
HpyAV CCTTC 1 cut(s) 800
HpyCH4III ACNGT 5 cut(s) 40, 459, 555, 560, 602
HpyCH4V TGCA 7 cut(s) 370, 622, 719, 875, 908, 941, 999
HpyF10VI GCNNNNNNNGC 2 cut(s) 125, 642
HpyF3I CTNAG 2 cut(s) 186, 539
Hsp92II CATG 6 cut(s) 427, 568, 686, 972, 1049, 1068
KflI GGGWCCC 1 cut(s) 275
KspAI GTTAAC 1 cut(s) 19
Kzo9I GATC 5 cut(s) 385, 409, 445, 522, 690
LmnI GCTCC 6 cut(s) 111, 116, 195, 591, 935, 956
Lsp1109I GCAGC 2 cut(s) 860, 863
LweI GCATC 5 cut(s) 313, 331, 481, 760, 986
MaeI CTAG 2 cut(s) 701, 989
MaeIII GTNAC 1 cut(s) 268
MalI GATC 5 cut(s) 387, 411, 447, 524, 692
MbiI CCGCTC 1 cut(s) 13
MboI GATC 5 cut(s) 385, 409, 445, 522, 690
MboII GAAGA 2 cut(s) 133, 881
MhlI GDGCHC 3 cut(s) 121, 596, 1011
MlsI TGGCCA 1 cut(s) 260
MluCI AATT 1 cut(s) 1032
MluNI TGGCCA 1 cut(s) 260
MlyI GAGTC 4 cut(s) 104, 140, 178, 934
MmeI TCCRAC 2 cut(s) 197, 473
Mox20I TGGCCA 1 cut(s) 260
MscI TGGCCA 1 cut(s) 260
MseI TTAA 4 cut(s) 18, 359, 867, 1035
Msp20I TGGCCA 1 cut(s) 260
MspA1I CMGCKG 1 cut(s) 487
MspI CCGG 2 cut(s) 129, 164
MspR9I CCNGG 3 cut(s) 164, 328, 857
Mva1269I GAATGC 1 cut(s) 677
MvaI CCWGG 2 cut(s) 328, 857
MvnI CGCG 1 cut(s) 1028
MwoI GCNNNNNNNGC 2 cut(s) 125, 642
NciI CCSGG 1 cut(s) 164
NdeII GATC 5 cut(s) 385, 409, 445, 522, 690
NlaIII CATG 6 cut(s) 427, 568, 686, 972, 1049, 1068
NlaIV GGNNCC 7 cut(s) 9, 107, 276, 277, 310, 762, 1056
NmeAIII GCCGAG 3 cut(s) 90, 128, 189
PaeR7I CTCGAG 2 cut(s) 122, 240
PagI TCATGA 3 cut(s) 564, 682, 1045
PctI GAATGC 1 cut(s) 677
PfeI GAWTC 9 cut(s) 31, 132, 298, 397, 469, 512, 656, 812, 1060
Pfl23II CGTACG 1 cut(s) 555
PflFI GACNNNGTC 1 cut(s) 248
PflMI CCANNNNNTGG 1 cut(s) 969
PkrI GCNGC 3 cut(s) 12, 850, 853
Ple19I CGATCG 1 cut(s) 412
PleI GAGTC 4 cut(s) 103, 140, 178, 933
PpsI GAGTC 4 cut(s) 103, 140, 178, 933
PpuMI RGGWCCY 1 cut(s) 275
Psp124BI GAGCTC 2 cut(s) 121, 1011
Psp5II RGGWCCY 1 cut(s) 275
Psp6I CCWGG 2 cut(s) 326, 855
PspGI CCWGG 2 cut(s) 326, 855
PspLI CGTACG 1 cut(s) 555
PspN4I GGNNCC 7 cut(s) 9, 107, 276, 277, 310, 762, 1056
PspPI GGNCC 4 cut(s) 275, 308, 405, 761
PspPPI RGGWCCY 1 cut(s) 275
PstI CTGCAG 1 cut(s) 624
PsyI GACNNNGTC 1 cut(s) 248
PvuI CGATCG 1 cut(s) 412
PvuII CAGCTG 1 cut(s) 487
RsaI GTAC 4 cut(s) 161, 206, 557, 884
RsaNI GTAC 4 cut(s) 160, 205, 556, 883
SacI GAGCTC 2 cut(s) 121, 1011
SaqAI TTAA 4 cut(s) 18, 359, 867, 1035
SatI GCNGC 3 cut(s) 11, 849, 852
Sau3AI GATC 5 cut(s) 385, 409, 445, 522, 690
Sau96I GGNCC 4 cut(s) 275, 308, 405, 761
SchI GAGTC 4 cut(s) 104, 140, 178, 934
ScrFI CCNGG 3 cut(s) 164, 328, 857
SduI GDGCHC 3 cut(s) 121, 596, 1011
SfaNI GCATC 5 cut(s) 313, 331, 481, 760, 986
SfcI CTRYAG 2 cut(s) 474, 620
Sfr274I CTCGAG 2 cut(s) 122, 240
SinI GGWCC 2 cut(s) 275, 761
SlaI CTCGAG 2 cut(s) 122, 240
SmlI CTYRAG 2 cut(s) 122, 240
SmoI CTYRAG 2 cut(s) 122, 240
Sse9I AATT 1 cut(s) 1032
SsiI CCGC 4 cut(s) 5, 11, 114, 1028
SspI AATATT 1 cut(s) 800
SspMI CTAG 2 cut(s) 701, 989
SstI GAGCTC 2 cut(s) 121, 1011
StyD4I CCNGG 3 cut(s) 162, 326, 855
StyI CCWWGG 1 cut(s) 264
TaaI ACNGT 5 cut(s) 40, 459, 555, 560, 602
TaqI TCGA 6 cut(s) 123, 144, 241, 301, 467, 1005
TasI AATT 1 cut(s) 1032
TatI WGTACW 1 cut(s) 882
TauI GCSGC 1 cut(s) 13
TfiI GAWTC 9 cut(s) 31, 132, 298, 397, 469, 512, 656, 812, 1060
Tru1I TTAA 4 cut(s) 18, 359, 867, 1035
Tru9I TTAA 4 cut(s) 18, 359, 867, 1035
TseI GCWGC 2 cut(s) 848, 851
TspDTI ATGAA 5 cut(s) 389, 561, 581, 881, 1034
TspGWI ACGGA 1 cut(s) 389
Tth111I GACNNNGTC 1 cut(s) 248
Van91I CCANNNNNTGG 1 cut(s) 969
VpaK11BI GGWCC 2 cut(s) 275, 761
XbaI TCTAGA 1 cut(s) 988
XhoI CTCGAG 2 cut(s) 122, 240
XmiI GTMKAC 1 cut(s) 727
XspI CTAG 2 cut(s) 701, 989
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.